BLASTX nr result

ID: Ephedra29_contig00012104 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00012104
         (1096 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR17758.1 unknown [Picea sitchensis]                                  72   5e-10

>ABR17758.1 unknown [Picea sitchensis]
          Length = 890

 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 26/222 (11%)
 Frame = +2

Query: 281 QMDDFSWDKFPSSEDHMVPDSSDIEDEWGVKRRHWKLMYSEGYPTMPI----QEQHRTGD 448
           ++DD  WD F  S+DH+VPD  D ++        W + Y     ++ +     EQ   G+
Sbjct: 8   EIDDVVWDGFEQSDDHIVPDPEDTQE------GTWMVKYDNRKKSLNVLSKSTEQKPVGN 61

Query: 449 HKLFXXXXXXXXXXXXCEREPSSLPVGMDMWNSLDDMDMSKAEYNTICFEADMEIDETKG 628
             +              + EPS+  + MD W   D  D  +A YN +  ++ M I   +G
Sbjct: 62  KNVLHREKEEVMACSNGKEEPSTQLLDMDTW--CDAQDEKQATYNLMHTDSGMGIKSGQG 119

Query: 629 IPNEGFNKDVKMEHENANILLGNCR-------GDVLLGENSIDLDSSS------------ 751
           +  + +  D+K+     ++++G C+       GD +LG+    + S+S            
Sbjct: 120 VGGDCYT-DIKLGSAENDLIIGICKEDSILENGDSVLGDRDATIMSNSCDFSLTDICPPE 178

Query: 752 ---QYMECEGKNDTSPNMLDYGLESIADFEEVDKLFGESDMT 868
              ++   E  +  S ++L+YG  +I +FE+VD+L    + T
Sbjct: 179 DDLEFFGHEHGDKNSCSLLEYGWANIGNFEDVDRLLRNCEST 220


Top