BLASTX nr result

ID: Ephedra29_contig00011926 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00011926
         (685 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q8L6J4.2 RecName: Full=DNA-directed RNA polymerase 1A; AltName: ...   152   3e-43
CAC95023.1 mitochondrial RNA polymerase, partial [Nicotiana taba...   152   5e-43
XP_011069439.1 PREDICTED: DNA-directed RNA polymerase 1A, partia...   144   6e-41
XP_016510760.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro...   143   1e-40
CAN71736.1 hypothetical protein VITISV_011556 [Vitis vinifera]        145   1e-40
ADE76724.1 unknown [Picea sitchensis]                                 147   5e-40
XP_008362267.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ...   146   6e-40
XP_009792610.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro...   143   7e-40
KRH07470.1 hypothetical protein GLYMA_16G091500 [Glycine max]         144   2e-39
XP_015076784.1 PREDICTED: DNA-directed RNA polymerase 1, mitocho...   153   5e-39
XP_006348633.1 PREDICTED: DNA-directed RNA polymerase 1, mitocho...   153   5e-39
XP_004239009.1 PREDICTED: DNA-directed RNA polymerase 1, mitocho...   153   5e-39
KHN34257.1 DNA-directed RNA polymerase 1B, mitochondrial [Glycin...   144   5e-39
XP_013743865.1 PREDICTED: DNA-directed RNA polymerase 3, chlorop...   141   7e-39
XP_017411941.1 PREDICTED: DNA-directed RNA polymerase 1A [Vigna ...   144   8e-39
CAC95022.1 mitochondrial RNA polymerase, partial [Nicotiana taba...   151   1e-38
KQL23892.1 hypothetical protein SETIT_0288242mg, partial [Setari...   143   1e-38
XP_008459412.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...   152   1e-38
XP_016462430.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ...   152   1e-38
NP_001289502.1 DNA-directed RNA polymerase 1, mitochondrial [Nic...   152   1e-38

>Q8L6J4.2 RecName: Full=DNA-directed RNA polymerase 1A; AltName:
           Full=NictaRpoT1-syl; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 1A
          Length = 155

 Score =  152 bits (383), Expect = 3e-43
 Identities = 69/83 (83%), Positives = 77/83 (92%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C E+GL+FAGVHDSYWTHA+DVDQMN ILREKFVELYD PILE+LLESFQ SFP+L 
Sbjct: 73  AIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQ 132

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLPERGDFDL+EVL SPYFFN
Sbjct: 133 FPPLPERGDFDLREVLESPYFFN 155


>CAC95023.1 mitochondrial RNA polymerase, partial [Nicotiana tabacum]
          Length = 173

 Score =  152 bits (383), Expect = 5e-43
 Identities = 69/83 (83%), Positives = 77/83 (92%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C E+GL+FAGVHDSYWTHA+DVDQMN ILREKFVELYD PILE+LLESFQ SFP+L 
Sbjct: 91  AIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQ 150

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLPERGDFDL+EVL SPYFFN
Sbjct: 151 FPPLPERGDFDLREVLESPYFFN 173


>XP_011069439.1 PREDICTED: DNA-directed RNA polymerase 1A, partial [Sesamum
           indicum]
          Length = 111

 Score =  144 bits (364), Expect = 6e-41
 Identities = 66/83 (79%), Positives = 74/83 (89%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C+EAGL+FAGVHDSYWTHA DVD+MN ILREKFVELY+ PILE+LLE FQ SFP L 
Sbjct: 29  AIACSEAGLSFAGVHDSYWTHACDVDKMNMILREKFVELYEAPILENLLEGFQKSFPNLN 88

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLPERGDFDL+EVL S YFFN
Sbjct: 89  FPPLPERGDFDLREVLESTYFFN 111


>XP_016510760.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic-like
           [Nicotiana tabacum]
          Length = 87

 Score =  143 bits (360), Expect = 1e-40
 Identities = 65/83 (78%), Positives = 73/83 (87%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C +AGL FAGVHDS+WTHA DVDQMN ILREKFVELY  PILEDLLESFQ S+P L 
Sbjct: 5   AVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQKSYPALT 64

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLP+RGDF+L+EVL SPYFFN
Sbjct: 65  FPPLPKRGDFNLREVLESPYFFN 87


>CAN71736.1 hypothetical protein VITISV_011556 [Vitis vinifera]
          Length = 168

 Score =  145 bits (367), Expect = 1e-40
 Identities = 66/83 (79%), Positives = 74/83 (89%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C +AGL FAGVHDSYWTHA DVD+MN ILREKFV+LY+ PILE+LLESFQ SFP L 
Sbjct: 86  AIACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVQLYETPILENLLESFQQSFPALE 145

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLPERGDFDL+EVL SPYFFN
Sbjct: 146 FPPLPERGDFDLREVLESPYFFN 168


>ADE76724.1 unknown [Picea sitchensis]
          Length = 255

 Score =  147 bits (370), Expect = 5e-40
 Identities = 67/83 (80%), Positives = 77/83 (92%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           AL+C EAGL+FAGVHDSYWTHAA+V++MN+ILREKFVELY  PILE+LLESF+ SFPEL 
Sbjct: 173 ALACKEAGLSFAGVHDSYWTHAANVEKMNHILREKFVELYSAPILENLLESFETSFPELT 232

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLP+RGDF+L EVLNSPYFFN
Sbjct: 233 FPPLPDRGDFELNEVLNSPYFFN 255


>XP_008362267.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2A-like
           [Malus domestica]
          Length = 237

 Score =  146 bits (368), Expect = 6e-40
 Identities = 67/83 (80%), Positives = 73/83 (87%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A+SC  AGL FAGVHDSYWTHA DVD+MN ILREKFVELY+ PILE+LLESFQ SFP L 
Sbjct: 155 AVSCKRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQQSFPTLT 214

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLPERGDFDL++VL SPYFFN
Sbjct: 215 FPPLPERGDFDLRDVLESPYFFN 237


>XP_009792610.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic-like
           [Nicotiana sylvestris]
          Length = 145

 Score =  143 bits (360), Expect = 7e-40
 Identities = 65/83 (78%), Positives = 73/83 (87%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C +AGL FAGVHDS+WTHA DVDQMN ILREKFVELY  PILEDLLESFQ S+P L 
Sbjct: 63  AVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESFQKSYPALT 122

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLP+RGDF+L+EVL SPYFFN
Sbjct: 123 FPPLPKRGDFNLREVLESPYFFN 145


>KRH07470.1 hypothetical protein GLYMA_16G091500 [Glycine max]
          Length = 212

 Score =  144 bits (363), Expect = 2e-39
 Identities = 66/83 (79%), Positives = 73/83 (87%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C +AGL FAGVHDSYWTHA DVD+MN ILREKFVELYD PILE+LLESFQ +FP L 
Sbjct: 130 AVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYDAPILENLLESFQKTFPALN 189

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLPERGDFDL+EVL S YFFN
Sbjct: 190 FPPLPERGDFDLQEVLGSAYFFN 212


>XP_015076784.1 PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Solanum
            pennellii]
          Length = 993

 Score =  153 bits (386), Expect = 5e-39
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = -2

Query: 684  ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
            A++C EAGL+FAGVHDSYWTHA+DVDQMN ILREKFVELYD PILE+LLESFQ SFP+L 
Sbjct: 911  AIACKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQ 970

Query: 504  FPPLPERGDFDLKEVLNSPYFFN 436
            FPPLPERGDFDL+EVL SPYFFN
Sbjct: 971  FPPLPERGDFDLREVLESPYFFN 993


>XP_006348633.1 PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Solanum
            tuberosum]
          Length = 993

 Score =  153 bits (386), Expect = 5e-39
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = -2

Query: 684  ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
            A++C EAGL+FAGVHDSYWTHA+DVDQMN ILREKFVELYD PILE+LLESFQ SFP+L 
Sbjct: 911  AITCKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQ 970

Query: 504  FPPLPERGDFDLKEVLNSPYFFN 436
            FPPLPERGDFDL+EVL SPYFFN
Sbjct: 971  FPPLPERGDFDLREVLESPYFFN 993


>XP_004239009.1 PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Solanum
            lycopersicum]
          Length = 993

 Score =  153 bits (386), Expect = 5e-39
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = -2

Query: 684  ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
            A++C EAGL+FAGVHDSYWTHA+DVDQMN ILREKFVELYD PILE+LLESFQ SFP+L 
Sbjct: 911  AIACKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQ 970

Query: 504  FPPLPERGDFDLKEVLNSPYFFN 436
            FPPLPERGDFDL+EVL SPYFFN
Sbjct: 971  FPPLPERGDFDLREVLESPYFFN 993


>KHN34257.1 DNA-directed RNA polymerase 1B, mitochondrial [Glycine soja]
          Length = 255

 Score =  144 bits (363), Expect = 5e-39
 Identities = 66/83 (79%), Positives = 73/83 (87%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C +AGL FAGVHDSYWTHA DVD+MN ILREKFVELYD PILE+LLESFQ +FP L 
Sbjct: 173 AVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYDAPILENLLESFQKTFPALN 232

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLPERGDFDL+EVL S YFFN
Sbjct: 233 FPPLPERGDFDLQEVLGSAYFFN 255


>XP_013743865.1 PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Brassica napus]
          Length = 164

 Score =  141 bits (355), Expect = 7e-39
 Identities = 65/83 (78%), Positives = 71/83 (85%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C EAGL FAGVHDSYWTHA DVD MN ILREKFVELY  PILEDLL+SFQ S+P L 
Sbjct: 82  AVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYSSPILEDLLQSFQESYPTLV 141

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPP+P+RGDFDLKEVL S YFFN
Sbjct: 142 FPPVPKRGDFDLKEVLKSQYFFN 164


>XP_017411941.1 PREDICTED: DNA-directed RNA polymerase 1A [Vigna angularis]
           KOM24845.1 hypothetical protein LR48_Vigan2587s000100
           [Vigna angularis]
          Length = 255

 Score =  144 bits (362), Expect = 8e-39
 Identities = 64/83 (77%), Positives = 74/83 (89%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C + GL FAGVHDSYWTHA DVD+MN +LREKFVELY+ P+LE+LLESFQ+SFP L 
Sbjct: 173 AVACKKEGLNFAGVHDSYWTHACDVDKMNRLLREKFVELYETPVLENLLESFQSSFPSLT 232

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLPERGDFDL+EVL SPYFFN
Sbjct: 233 FPPLPERGDFDLREVLESPYFFN 255


>CAC95022.1 mitochondrial RNA polymerase, partial [Nicotiana tabacum]
          Length = 715

 Score =  151 bits (382), Expect = 1e-38
 Identities = 69/83 (83%), Positives = 76/83 (91%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C E+GL+FAGVHDSYWTHA DVDQMN ILREKFVELYD PILE+LLESFQ SFP+L 
Sbjct: 633 AIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQ 692

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLPERGDFDL+EVL SPYFFN
Sbjct: 693 FPPLPERGDFDLREVLESPYFFN 715


>KQL23892.1 hypothetical protein SETIT_0288242mg, partial [Setaria italica]
          Length = 259

 Score =  143 bits (361), Expect = 1e-38
 Identities = 65/83 (78%), Positives = 72/83 (86%)
 Frame = -2

Query: 684 ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
           A++C   GL FAGVHDSYWTHA DVD MN ILREKFVELYD PILE+LLESF+ SFP+L 
Sbjct: 177 AVACKRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLK 236

Query: 504 FPPLPERGDFDLKEVLNSPYFFN 436
           FPPLPERGDFD+K+VL SPYFFN
Sbjct: 237 FPPLPERGDFDMKDVLESPYFFN 259


>XP_008459412.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Cucumis melo]
          Length = 987

 Score =  152 bits (383), Expect = 1e-38
 Identities = 69/83 (83%), Positives = 76/83 (91%)
 Frame = -2

Query: 684  ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
            A++CN AGLTFAGVHDSYWTHA DVD+MN ILR+KFVELY+ PILEDLLESFQ SFP L 
Sbjct: 905  AIACNRAGLTFAGVHDSYWTHACDVDEMNRILRQKFVELYETPILEDLLESFQQSFPALD 964

Query: 504  FPPLPERGDFDLKEVLNSPYFFN 436
            FPPLPERG+FDLKEVL+SPYFFN
Sbjct: 965  FPPLPERGEFDLKEVLDSPYFFN 987


>XP_016462430.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 1,
            mitochondrial-like [Nicotiana tabacum]
          Length = 988

 Score =  152 bits (383), Expect = 1e-38
 Identities = 69/83 (83%), Positives = 77/83 (92%)
 Frame = -2

Query: 684  ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
            A++C E+GL+FAGVHDSYWTHA+DVDQMN ILREKFVELYD PILE+LLESFQ SFP+L 
Sbjct: 906  AIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQ 965

Query: 504  FPPLPERGDFDLKEVLNSPYFFN 436
            FPPLPERGDFDL+EVL SPYFFN
Sbjct: 966  FPPLPERGDFDLREVLESPYFFN 988


>NP_001289502.1 DNA-directed RNA polymerase 1, mitochondrial [Nicotiana sylvestris]
            CAC95019.1 mitochondrial RNA polymerase [Nicotiana
            sylvestris]
          Length = 1002

 Score =  152 bits (383), Expect = 1e-38
 Identities = 69/83 (83%), Positives = 77/83 (92%)
 Frame = -2

Query: 684  ALSCNEAGLTFAGVHDSYWTHAADVDQMNNILREKFVELYDQPILEDLLESFQNSFPELG 505
            A++C E+GL+FAGVHDSYWTHA+DVDQMN ILREKFVELYD PILE+LLESFQ SFP+L 
Sbjct: 920  AIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQ 979

Query: 504  FPPLPERGDFDLKEVLNSPYFFN 436
            FPPLPERGDFDL+EVL SPYFFN
Sbjct: 980  FPPLPERGDFDLREVLESPYFFN 1002


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