BLASTX nr result
ID: Ephedra29_contig00011695
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00011695
(882 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABK22776.1 unknown [Picea sitchensis] ABK26147.1 unknown [Picea ... 143 8e-40
XP_002263175.1 PREDICTED: sm-like protein LSM8 isoform X2 [Vitis... 141 4e-39
XP_012075049.1 PREDICTED: sm-like protein LSM8 [Jatropha curcas]... 141 6e-39
XP_006361132.1 PREDICTED: sm-like protein LSM8 [Solanum tuberosu... 140 1e-38
XP_010662026.1 PREDICTED: sm-like protein LSM8 isoform X1 [Vitis... 141 1e-38
XP_010528616.1 PREDICTED: sm-like protein LSM8 isoform X2 [Taren... 140 2e-38
XP_010060337.1 PREDICTED: sm-like protein LSM8 [Eucalyptus grand... 140 2e-38
XP_004512917.1 PREDICTED: sm-like protein LSM8 [Cicer arietinum] 140 2e-38
XP_018856591.1 PREDICTED: sm-like protein LSM8 [Juglans regia] 140 2e-38
XP_012075046.1 PREDICTED: sm-like protein LSM8 [Jatropha curcas]... 140 2e-38
XP_019182700.1 PREDICTED: sm-like protein LSM8 [Ipomoea nil] 139 5e-38
XP_016578007.1 PREDICTED: sm-like protein LSM8 [Capsicum annuum]... 139 5e-38
XP_004241374.1 PREDICTED: sm-like protein LSM8 [Solanum lycopers... 139 5e-38
ADR71257.1 U6 snRNA-associated Sm-like protein LSm8 [Hevea brasi... 139 5e-38
XP_009396334.1 PREDICTED: sm-like protein LSM8 [Musa acuminata s... 138 7e-38
XP_010043698.1 PREDICTED: sm-like protein LSM8 [Eucalyptus grand... 138 7e-38
XP_018851498.1 PREDICTED: sm-like protein LSM8 [Juglans regia] X... 138 1e-37
XP_006839014.1 PREDICTED: sm-like protein LSM8 [Amborella tricho... 138 1e-37
XP_007020938.1 PREDICTED: sm-like protein LSM8 isoform X2 [Theob... 138 1e-37
XP_001772731.1 predicted protein [Physcomitrella patens] EDQ6244... 138 1e-37
>ABK22776.1 unknown [Picea sitchensis] ABK26147.1 unknown [Picea sitchensis]
ABR17463.1 unknown [Picea sitchensis]
Length = 98
Score = 143 bits (361), Expect = 8e-40
Identities = 74/93 (79%), Positives = 77/93 (82%)
Frame = +1
Query: 151 GLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGLYIIR 330
GLEDLVD+TISVITNDGRNIVGILKGYDQATNLIMDESHERVYST+TGVEQLVLGLYIIR
Sbjct: 6 GLEDLVDETISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTRTGVEQLVLGLYIIR 65
Query: 331 GDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
GDNI VVG +LRAQPLK V H
Sbjct: 66 GDNISVVGELDEDLDSNLDLSQLRAQPLKPVMH 98
>XP_002263175.1 PREDICTED: sm-like protein LSM8 isoform X2 [Vitis vinifera]
CBI26399.3 unnamed protein product, partial [Vitis
vinifera]
Length = 98
Score = 141 bits (356), Expect = 4e-39
Identities = 71/97 (73%), Positives = 78/97 (80%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
+TG GLE LVDQTISVITNDGRNIVG+LKG+DQATN+I+DESHERVYSTK GV+QLVLGL
Sbjct: 2 STGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI +VG KLRA PLK VTH
Sbjct: 62 YIIRGDNISIVGELDEELDSSLDLSKLRAHPLKPVTH 98
>XP_012075049.1 PREDICTED: sm-like protein LSM8 [Jatropha curcas] KDP35470.1
hypothetical protein JCGZ_10863 [Jatropha curcas]
Length = 99
Score = 141 bits (355), Expect = 6e-39
Identities = 72/99 (72%), Positives = 78/99 (78%)
Frame = +1
Query: 133 MSTTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVL 312
MS+TG GLE LVDQTISVITNDGRNIVGILKG+DQATN+I+DESHERVYSTK GV+QLVL
Sbjct: 1 MSSTGPGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVL 60
Query: 313 GLYIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
GLYIIRGDNI +VG LRA PLK V H
Sbjct: 61 GLYIIRGDNISIVGELDEELDSHLDLSNLRAHPLKPVIH 99
>XP_006361132.1 PREDICTED: sm-like protein LSM8 [Solanum tuberosum] XP_015170615.1
PREDICTED: sm-like protein LSM8 [Solanum tuberosum]
Length = 98
Score = 140 bits (353), Expect = 1e-38
Identities = 71/96 (73%), Positives = 77/96 (80%)
Frame = +1
Query: 142 TGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGLY 321
TG+GLE LVDQTISVITNDGRNIVG+L+G+DQATNLI+DESHERVYSTK GV+QLVLGLY
Sbjct: 3 TGLGLESLVDQTISVITNDGRNIVGVLRGFDQATNLILDESHERVYSTKEGVQQLVLGLY 62
Query: 322 IIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
IIRGDNI VVG KLRA PLK V H
Sbjct: 63 IIRGDNISVVGELDEDLDSNLDMSKLRAHPLKPVVH 98
>XP_010662026.1 PREDICTED: sm-like protein LSM8 isoform X1 [Vitis vinifera]
Length = 132
Score = 141 bits (356), Expect = 1e-38
Identities = 71/97 (73%), Positives = 78/97 (80%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
+TG GLE LVDQTISVITNDGRNIVG+LKG+DQATN+I+DESHERVYSTK GV+QLVLGL
Sbjct: 36 STGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGL 95
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI +VG KLRA PLK VTH
Sbjct: 96 YIIRGDNISIVGELDEELDSSLDLSKLRAHPLKPVTH 132
>XP_010528616.1 PREDICTED: sm-like protein LSM8 isoform X2 [Tarenaya hassleriana]
Length = 98
Score = 140 bits (352), Expect = 2e-38
Identities = 69/97 (71%), Positives = 78/97 (80%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
+TG+GLE LVDQTISVITNDGRNIVG+LKG+DQATN+I+DESHERV+STK GV+QLVLGL
Sbjct: 2 STGIGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI V+G KLRA PLK V H
Sbjct: 62 YIIRGDNISVIGELDEELDASLDFSKLRAHPLKPVVH 98
>XP_010060337.1 PREDICTED: sm-like protein LSM8 [Eucalyptus grandis] XP_010060338.1
PREDICTED: sm-like protein LSM8 [Eucalyptus grandis]
XP_018732094.1 PREDICTED: sm-like protein LSM8
[Eucalyptus grandis]
Length = 98
Score = 140 bits (352), Expect = 2e-38
Identities = 71/97 (73%), Positives = 77/97 (79%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
+TG GL+ LVDQTISVITNDGRNIVG+LKGYDQATN+I+DESHERVYSTK GV+QLVLGL
Sbjct: 2 STGPGLDSLVDQTISVITNDGRNIVGVLKGYDQATNIILDESHERVYSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI VVG KLRA PLK V H
Sbjct: 62 YIIRGDNISVVGELDEELDSNLDLSKLRAHPLKPVIH 98
>XP_004512917.1 PREDICTED: sm-like protein LSM8 [Cicer arietinum]
Length = 98
Score = 140 bits (352), Expect = 2e-38
Identities = 71/97 (73%), Positives = 78/97 (80%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
+TG GLE LVDQTISVITNDGRNIVG+LKG+DQATN+I+DESHERV+STK GV+QLVLGL
Sbjct: 2 STGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI VVG KLRA PLKAV H
Sbjct: 62 YIIRGDNISVVGELDEELDSNLDLSKLRAHPLKAVIH 98
>XP_018856591.1 PREDICTED: sm-like protein LSM8 [Juglans regia]
Length = 99
Score = 140 bits (352), Expect = 2e-38
Identities = 71/99 (71%), Positives = 78/99 (78%)
Frame = +1
Query: 133 MSTTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVL 312
MS+ G GLE LVDQTISVITNDGRNIVG+LKG+DQATN+I+DESHERVYSTK GV+QLVL
Sbjct: 1 MSSGGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVL 60
Query: 313 GLYIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
GLYIIRGDNI +VG KLRA PLK V H
Sbjct: 61 GLYIIRGDNISIVGELDEELDSSLDLSKLRAHPLKPVIH 99
>XP_012075046.1 PREDICTED: sm-like protein LSM8 [Jatropha curcas] XP_012075047.1
PREDICTED: sm-like protein LSM8 [Jatropha curcas]
KDP35464.1 hypothetical protein JCGZ_10857 [Jatropha
curcas]
Length = 99
Score = 140 bits (352), Expect = 2e-38
Identities = 71/99 (71%), Positives = 78/99 (78%)
Frame = +1
Query: 133 MSTTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVL 312
MS+TG GLE LVDQTISVITNDGRNIVGILKG+DQATN+I+DESHERVYSTK GV+QLVL
Sbjct: 1 MSSTGPGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVL 60
Query: 313 GLYIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
GLYIIRGDNI +VG +RA PLK V H
Sbjct: 61 GLYIIRGDNISIVGELDEELDSHLDLSNVRAHPLKPVIH 99
>XP_019182700.1 PREDICTED: sm-like protein LSM8 [Ipomoea nil]
Length = 98
Score = 139 bits (349), Expect = 5e-38
Identities = 72/95 (75%), Positives = 75/95 (78%)
Frame = +1
Query: 145 GVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGLYI 324
G GLE LVDQTISVITNDGRNIVGILKG+DQATNLI+DESHERVYSTK GV+QLVLGLYI
Sbjct: 4 GPGLESLVDQTISVITNDGRNIVGILKGFDQATNLILDESHERVYSTKEGVQQLVLGLYI 63
Query: 325 IRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
IRGDNI VVG KLRA PLK V H
Sbjct: 64 IRGDNISVVGELDEELDANLDLSKLRAHPLKPVVH 98
>XP_016578007.1 PREDICTED: sm-like protein LSM8 [Capsicum annuum] XP_016578008.1
PREDICTED: sm-like protein LSM8 [Capsicum annuum]
Length = 98
Score = 139 bits (349), Expect = 5e-38
Identities = 70/97 (72%), Positives = 77/97 (79%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
+ G+GLE LVDQTISVITNDGRNIVG+L+G+DQATNLI+DESHERVYSTK GV+QLVLGL
Sbjct: 2 SAGLGLESLVDQTISVITNDGRNIVGVLRGFDQATNLILDESHERVYSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI VVG KLRA PLK V H
Sbjct: 62 YIIRGDNISVVGELDEDLDNNLDMSKLRAHPLKPVVH 98
>XP_004241374.1 PREDICTED: sm-like protein LSM8 [Solanum lycopersicum]
XP_010322456.1 PREDICTED: sm-like protein LSM8 [Solanum
lycopersicum] XP_010322457.1 PREDICTED: sm-like protein
LSM8 [Solanum lycopersicum] XP_015077257.1 PREDICTED:
sm-like protein LSM8 [Solanum pennellii] XP_015077258.1
PREDICTED: sm-like protein LSM8 [Solanum pennellii]
Length = 98
Score = 139 bits (349), Expect = 5e-38
Identities = 70/96 (72%), Positives = 77/96 (80%)
Frame = +1
Query: 142 TGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGLY 321
+G+GLE LVDQTISVITNDGRNIVG+L+G+DQATNLI+DESHERVYSTK GV+QLVLGLY
Sbjct: 3 SGLGLESLVDQTISVITNDGRNIVGVLRGFDQATNLILDESHERVYSTKEGVQQLVLGLY 62
Query: 322 IIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
IIRGDNI VVG KLRA PLK V H
Sbjct: 63 IIRGDNISVVGELDEDLDSNLDMSKLRAHPLKPVVH 98
>ADR71257.1 U6 snRNA-associated Sm-like protein LSm8 [Hevea brasiliensis]
Length = 98
Score = 139 bits (349), Expect = 5e-38
Identities = 70/97 (72%), Positives = 77/97 (79%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
+TG+GLE LVDQTISVITNDGRNIVGILKG+DQATN+I+DESHERVYSTK GV+QLVLGL
Sbjct: 2 STGLGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI +VG LRA PLK V H
Sbjct: 62 YIIRGDNISIVGELDEELDSHIDLSNLRAHPLKPVIH 98
>XP_009396334.1 PREDICTED: sm-like protein LSM8 [Musa acuminata subsp. malaccensis]
XP_009396335.1 PREDICTED: sm-like protein LSM8 [Musa
acuminata subsp. malaccensis]
Length = 98
Score = 138 bits (348), Expect = 7e-38
Identities = 70/97 (72%), Positives = 77/97 (79%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
+TG GLE LVDQTISVITNDGRNIVG+L+G+DQATN+I+DESHERVYSTK GV+QLVLGL
Sbjct: 2 STGPGLESLVDQTISVITNDGRNIVGVLRGFDQATNIILDESHERVYSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI VVG KLRA PLK V H
Sbjct: 62 YIIRGDNISVVGELDEELDANLDLSKLRAHPLKPVIH 98
>XP_010043698.1 PREDICTED: sm-like protein LSM8 [Eucalyptus grandis] KCW85683.1
hypothetical protein EUGRSUZ_B02461 [Eucalyptus grandis]
Length = 98
Score = 138 bits (348), Expect = 7e-38
Identities = 70/97 (72%), Positives = 76/97 (78%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
+TG GL+ LVDQTISVITNDGRNIVG+LKGYDQATN+I+DESHERVYSTK GV+QLVLGL
Sbjct: 2 STGPGLDSLVDQTISVITNDGRNIVGVLKGYDQATNIILDESHERVYSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI VVG KLRA P K V H
Sbjct: 62 YIIRGDNISVVGELDEELDSNLDFSKLRAHPFKPVIH 98
>XP_018851498.1 PREDICTED: sm-like protein LSM8 [Juglans regia] XP_018851499.1
PREDICTED: sm-like protein LSM8 [Juglans regia]
XP_018851500.1 PREDICTED: sm-like protein LSM8 [Juglans
regia]
Length = 98
Score = 138 bits (347), Expect = 1e-37
Identities = 69/97 (71%), Positives = 78/97 (80%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
++G+GLE LVDQTISVITNDGRNIVG+LKG+DQATN+I+DESHERVYSTK GV+QLVLGL
Sbjct: 2 SSGLGLETLVDQTISVITNDGRNIVGVLKGFDQATNVILDESHERVYSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI +VG KLRA PLK V H
Sbjct: 62 YIIRGDNISIVGELDEELDSSLDLSKLRAHPLKPVIH 98
>XP_006839014.1 PREDICTED: sm-like protein LSM8 [Amborella trichopoda]
XP_011621662.1 PREDICTED: sm-like protein LSM8
[Amborella trichopoda] XP_011621663.1 PREDICTED: sm-like
protein LSM8 [Amborella trichopoda] ERN01583.1
hypothetical protein AMTR_s00002p00272060 [Amborella
trichopoda]
Length = 98
Score = 138 bits (347), Expect = 1e-37
Identities = 70/97 (72%), Positives = 77/97 (79%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
++G GLE LVDQTISVITNDGRNIVGILKG+DQATN+I+DESHERVYSTK GV+QLVLGL
Sbjct: 2 SSGPGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI V+G KLRA PLK V H
Sbjct: 62 YIIRGDNISVIGELDEELDSNLDLSKLRAHPLKPVIH 98
>XP_007020938.1 PREDICTED: sm-like protein LSM8 isoform X2 [Theobroma cacao]
XP_007020940.1 PREDICTED: sm-like protein LSM8 isoform
X2 [Theobroma cacao] EOY12463.1 Small nuclear
ribonucleoprotein family protein isoform 1 [Theobroma
cacao] EOY12464.1 Small nuclear ribonucleoprotein family
protein isoform 1 [Theobroma cacao] EOY12465.1 Small
nuclear ribonucleoprotein family protein isoform 1
[Theobroma cacao]
Length = 98
Score = 138 bits (347), Expect = 1e-37
Identities = 71/97 (73%), Positives = 76/97 (78%)
Frame = +1
Query: 139 TTGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGL 318
+TG GLE LVDQTISVITNDGRNIVGILKG+DQATN+I+DESHERVYSTK GV+QLVLGL
Sbjct: 2 STGPGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVLGL 61
Query: 319 YIIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
YIIRGDNI VVG LRA PLK V H
Sbjct: 62 YIIRGDNISVVGELDEELDSALDLSNLRAHPLKPVIH 98
>XP_001772731.1 predicted protein [Physcomitrella patens] EDQ62445.1 predicted
protein [Physcomitrella patens]
Length = 98
Score = 138 bits (347), Expect = 1e-37
Identities = 70/96 (72%), Positives = 76/96 (79%)
Frame = +1
Query: 142 TGVGLEDLVDQTISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTKTGVEQLVLGLY 321
T GLE L+DQTISVITNDGRNIVG+LKG+DQATNLI+DESHERVYSTK GVEQ+VLGL+
Sbjct: 3 TDTGLESLIDQTISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKAGVEQVVLGLH 62
Query: 322 IIRGDNIGVVGXXXXXXXXXXXXXKLRAQPLKAVTH 429
IIRGDNIGVVG LRA PLKAV H
Sbjct: 63 IIRGDNIGVVGELDEELDSNLDLSALRAHPLKAVQH 98