BLASTX nr result

ID: Ephedra29_contig00011547 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00011547
         (947 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABK24412.1 unknown [Picea sitchensis]                                 110   2e-23
XP_017982166.1 PREDICTED: F-box protein SKIP2 [Theobroma cacao]       104   2e-21
EOY32223.1 VIER F-box protein 1 [Theobroma cacao]                     104   2e-21
XP_002309038.2 hypothetical protein POPTR_0006s08160g [Populus t...   104   3e-21
XP_011019921.1 PREDICTED: F-box protein SKIP2-like isoform X1 [P...   104   3e-21
XP_010665121.1 PREDICTED: F-box protein SKIP2-like [Vitis vinifera]   103   4e-21
CAN81430.1 hypothetical protein VITISV_010695 [Vitis vinifera]        103   4e-21
OAY58983.1 hypothetical protein MANES_02G222100 [Manihot esculenta]   103   6e-21
XP_010036053.1 PREDICTED: F-box protein SKIP2 [Eucalyptus grandis]    103   7e-21
XP_011019923.1 PREDICTED: F-box protein SKIP2-like isoform X3 [P...   102   1e-20
XP_011019922.1 PREDICTED: F-box protein SKIP2-like isoform X2 [P...   102   1e-20
XP_016455607.1 PREDICTED: F-box protein At1g47056-like [Nicotian...   102   2e-20
XP_009598217.1 PREDICTED: F-box protein At1g47056-like [Nicotian...   101   3e-20
CDP01289.1 unnamed protein product [Coffea canephora]                 100   4e-20
AAL07231.1 putative SKP1 interacting partner SKIP2 [Arabidopsis ...    98   7e-20
XP_009791823.1 PREDICTED: F-box protein At1g47056-like [Nicotian...   100   7e-20
XP_019245150.1 PREDICTED: F-box protein At1g47056-like [Nicotian...   100   1e-19
KZV52087.1 hypothetical protein F511_41476 [Dorcoceras hygrometr...   100   1e-19
XP_016719093.1 PREDICTED: F-box protein SKIP2-like isoform X3 [G...    99   1e-19
XP_017622763.1 PREDICTED: F-box protein SKIP2 isoform X2 [Gossyp...    99   1e-19

>ABK24412.1 unknown [Picea sitchensis]
          Length = 498

 Score =  110 bits (274), Expect = 2e-23
 Identities = 61/116 (52%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
 Frame = +2

Query: 605 MGQXXXXLPHPLIGH--HSGRIEPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSC 778
           MGQ    L  P +G    +  +E ++    +   D   YLPDEC+A IFQK+   DRN+C
Sbjct: 1   MGQSNSSLSPPPMGLFLENSEVERFDVYPEQ---DLIVYLPDECLASIFQKLTNEDRNAC 57

Query: 779 SLVCKRWHLIESKSRQRLALVAQNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
           SLVC RWH IESKSRQRL L+A+  LS  L +L  RFE VTVL+LKCSRK  SID+
Sbjct: 58  SLVCSRWHRIESKSRQRLVLMARTELSSLLPALFMRFEHVTVLSLKCSRKFPSIDN 113


>XP_017982166.1 PREDICTED: F-box protein SKIP2 [Theobroma cacao]
          Length = 538

 Score =  104 bits (260), Expect = 2e-21
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = +2

Query: 701 DYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSSLV 880
           D T  LPDEC+A +F K+G  DR++CSLVCKRW  ++SKSRQRLALVA + +S +L SL 
Sbjct: 29  DLTLTLPDECLAWVFGKLGCHDRSNCSLVCKRWRHVDSKSRQRLALVAGSDISPWLPSLF 88

Query: 881 TRFEGVTVLALKCSRKLRSIDD 946
           +RF  ++VL+LKCSRKL SIDD
Sbjct: 89  SRFSSISVLSLKCSRKLASIDD 110


>EOY32223.1 VIER F-box protein 1 [Theobroma cacao]
          Length = 586

 Score =  104 bits (260), Expect = 2e-21
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = +2

Query: 701 DYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSSLV 880
           D T  LPDEC+A +F K+G  DR++CSLVCKRW  ++SKSRQRLALVA + +S +L SL 
Sbjct: 77  DLTLTLPDECLAWVFGKLGCHDRSNCSLVCKRWRHVDSKSRQRLALVAGSDISPWLPSLF 136

Query: 881 TRFEGVTVLALKCSRKLRSIDD 946
           +RF  ++VL+LKCSRKL SIDD
Sbjct: 137 SRFSSISVLSLKCSRKLASIDD 158


>XP_002309038.2 hypothetical protein POPTR_0006s08160g [Populus trichocarpa]
           EEE92561.2 hypothetical protein POPTR_0006s08160g
           [Populus trichocarpa]
          Length = 572

 Score =  104 bits (259), Expect = 3e-21
 Identities = 57/103 (55%), Positives = 72/103 (69%)
 Frame = +2

Query: 638 LIGHHSGRIEPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESK 817
           +IG +SG I+         D D T  LPDEC+  +F K+G  DRNSCSLVCKRW  ++SK
Sbjct: 21  IIGKNSGDIDG--------DDDLTLSLPDECLGSVFGKLGCLDRNSCSLVCKRWKCVDSK 72

Query: 818 SRQRLALVAQNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
           SR RL L+A++ LS  L SL++RF  V+VL+LKCSRKL SIDD
Sbjct: 73  SRNRLVLLARSELSPCLPSLLSRFNTVSVLSLKCSRKLFSIDD 115


>XP_011019921.1 PREDICTED: F-box protein SKIP2-like isoform X1 [Populus euphratica]
          Length = 573

 Score =  104 bits (259), Expect = 3e-21
 Identities = 57/103 (55%), Positives = 72/103 (69%)
 Frame = +2

Query: 638 LIGHHSGRIEPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESK 817
           +IG +SG I+         D D T  LPDEC+  +F K+G  DRNSCSLVCKRW  ++SK
Sbjct: 21  IIGKNSGDIDG--------DDDLTLSLPDECLGSVFGKLGCLDRNSCSLVCKRWKCVDSK 72

Query: 818 SRQRLALVAQNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
           SR RL L+A++ LS  L SL++RF  V+VL+LKCSRKL SIDD
Sbjct: 73  SRNRLVLLARSELSPCLPSLLSRFNTVSVLSLKCSRKLFSIDD 115


>XP_010665121.1 PREDICTED: F-box protein SKIP2-like [Vitis vinifera]
          Length = 538

 Score =  103 bits (258), Expect = 4e-21
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = +2

Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
           D D T  LPDEC+A +F K+G  DRN+CSLVC+RW  ++SKSRQRL L+A++ +S FL +
Sbjct: 37  DGDLTLGLPDECLAGVFGKLGCHDRNTCSLVCRRWRAVDSKSRQRLVLLARSDVSPFLPA 96

Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
           L+ RF  V+VL+LKCSRK+ SIDD
Sbjct: 97  LLCRFSSVSVLSLKCSRKIVSIDD 120


>CAN81430.1 hypothetical protein VITISV_010695 [Vitis vinifera]
          Length = 544

 Score =  103 bits (258), Expect = 4e-21
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = +2

Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
           D D T  LPDEC+A +F K+G  DRN+CSLVC+RW  ++SKSRQRL L+A++ +S FL +
Sbjct: 63  DGDLTLGLPDECLAGVFGKLGCHDRNTCSLVCRRWRAVDSKSRQRLVLLARSDVSPFLPA 122

Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
           L+ RF  V+VL+LKCSRK+ SIDD
Sbjct: 123 LLCRFSSVSVLSLKCSRKIVSIDD 146


>OAY58983.1 hypothetical protein MANES_02G222100 [Manihot esculenta]
          Length = 513

 Score =  103 bits (256), Expect = 6e-21
 Identities = 53/114 (46%), Positives = 75/114 (65%)
 Frame = +2

Query: 605 MGQXXXXLPHPLIGHHSGRIEPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSL 784
           MGQ      + +  H +   E +    S++  D+T +LPDEC+A +F  +G  DRNSCSL
Sbjct: 1   MGQGTSSCSNEICKHTA---EGHSIVISKKHEDFTSFLPDECLAKVFGSLGSHDRNSCSL 57

Query: 785 VCKRWHLIESKSRQRLALVAQNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
           VCKRW  ++S+SR RL L+A   +S  L +L++RF  V+VL+LKCSRKL SI+D
Sbjct: 58  VCKRWRAVDSESRYRLVLLAPCEMSQSLPALLSRFSSVSVLSLKCSRKLLSIND 111


>XP_010036053.1 PREDICTED: F-box protein SKIP2 [Eucalyptus grandis]
          Length = 555

 Score =  103 bits (256), Expect = 7e-21
 Identities = 50/88 (56%), Positives = 67/88 (76%)
 Frame = +2

Query: 683 TSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSC 862
           +S + FD T  LPDEC+A +F  +G  DR SCSLVC+RWHL++++SRQRLALVA++ ++ 
Sbjct: 32  SSADRFDLTLGLPDECLASVFALLGSDDRGSCSLVCRRWHLVDARSRQRLALVARSEIAP 91

Query: 863 FLSSLVTRFEGVTVLALKCSRKLRSIDD 946
            L  L+ RF  V+VL+LKCSRKL SI D
Sbjct: 92  SLPPLLRRFGSVSVLSLKCSRKLVSIGD 119


>XP_011019923.1 PREDICTED: F-box protein SKIP2-like isoform X3 [Populus euphratica]
          Length = 559

 Score =  102 bits (254), Expect = 1e-20
 Identities = 52/84 (61%), Positives = 64/84 (76%)
 Frame = +2

Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
           D D T  LPDEC+  +F K+G  DRNSCSLVCKRW  ++SKSR RL L+A++ LS  L S
Sbjct: 18  DDDLTLSLPDECLGSVFGKLGCLDRNSCSLVCKRWKCVDSKSRNRLVLLARSELSPCLPS 77

Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
           L++RF  V+VL+LKCSRKL SIDD
Sbjct: 78  LLSRFNTVSVLSLKCSRKLFSIDD 101


>XP_011019922.1 PREDICTED: F-box protein SKIP2-like isoform X2 [Populus euphratica]
          Length = 559

 Score =  102 bits (254), Expect = 1e-20
 Identities = 52/84 (61%), Positives = 64/84 (76%)
 Frame = +2

Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
           D D T  LPDEC+  +F K+G  DRNSCSLVCKRW  ++SKSR RL L+A++ LS  L S
Sbjct: 18  DDDLTLSLPDECLGSVFGKLGCLDRNSCSLVCKRWKCVDSKSRNRLVLLARSELSPCLPS 77

Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
           L++RF  V+VL+LKCSRKL SIDD
Sbjct: 78  LLSRFNTVSVLSLKCSRKLFSIDD 101


>XP_016455607.1 PREDICTED: F-box protein At1g47056-like [Nicotiana tabacum]
          Length = 534

 Score =  102 bits (253), Expect = 2e-20
 Identities = 47/84 (55%), Positives = 61/84 (72%)
 Frame = +2

Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
           DFDYT+Y+PDEC+A IFQ +  GDR SCSLVC+RW  +E +SR RL+L AQ+ L   +  
Sbjct: 44  DFDYTNYIPDECLACIFQSLSSGDRKSCSLVCRRWLRVEGQSRHRLSLNAQSDLVTVVPL 103

Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
           + +RF+ VT LALKC R+  SI D
Sbjct: 104 IFSRFDSVTKLALKCDRRSTSIGD 127


>XP_009598217.1 PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
          Length = 534

 Score =  101 bits (251), Expect = 3e-20
 Identities = 47/84 (55%), Positives = 60/84 (71%)
 Frame = +2

Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
           DFDYT+Y+PDEC+A IFQ +  GDR SCSLVC+RW  +E +SR RL+L AQ+ L      
Sbjct: 44  DFDYTNYIPDECLACIFQSLSSGDRKSCSLVCRRWLRVEGQSRHRLSLNAQSDLVTVAPL 103

Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
           + +RF+ VT LALKC R+  SI D
Sbjct: 104 IFSRFDSVTKLALKCDRRSTSIGD 127


>CDP01289.1 unnamed protein product [Coffea canephora]
          Length = 545

 Score =  100 bits (250), Expect = 4e-20
 Identities = 50/94 (53%), Positives = 62/94 (65%)
 Frame = +2

Query: 665 EPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVA 844
           +P +  T E   DY   LPDEC+A IFQ +  GDR  CSLVC+RW L+E +SR RL+L A
Sbjct: 47  DPADVFTGEGLADYISNLPDECLAYIFQSLSSGDRKRCSLVCRRWLLVEGQSRHRLSLNA 106

Query: 845 QNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
           Q  L  F+ S+ TRF+ VT LALKC R+  SI D
Sbjct: 107 QAELLTFIPSIFTRFDAVTKLALKCDRRSASIGD 140


>AAL07231.1 putative SKP1 interacting partner SKIP2 [Arabidopsis thaliana]
          Length = 304

 Score = 97.8 bits (242), Expect = 7e-20
 Identities = 46/84 (54%), Positives = 62/84 (73%)
 Frame = +2

Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
           D D+T  LPDEC+A +FQ +G GDR  CSLVCKRW L++ +SR RL+L A++ +S FL+S
Sbjct: 39  DRDFTGDLPDECLAHVFQFLGAGDRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTS 98

Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
           +  RF+ VT LAL+C RK  S+ D
Sbjct: 99  MFNRFDSVTKLALRCDRKSVSLSD 122


>XP_009791823.1 PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
          Length = 535

 Score =  100 bits (248), Expect = 7e-20
 Identities = 46/84 (54%), Positives = 60/84 (71%)
 Frame = +2

Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
           D DYT+Y+PDEC+A IFQ +  GDR SCSLVC+RW  +E +SR RL+L AQ+ L   +  
Sbjct: 45  DLDYTNYIPDECLACIFQSLSSGDRKSCSLVCRRWLRVEGQSRHRLSLNAQSDLVAVVPL 104

Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
           + +RF+ VT LALKC R+  SI D
Sbjct: 105 IFSRFDSVTKLALKCDRRSTSIGD 128


>XP_019245150.1 PREDICTED: F-box protein At1g47056-like [Nicotiana attenuata]
           OIT04199.1 f-box protein [Nicotiana attenuata]
          Length = 534

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 46/84 (54%), Positives = 60/84 (71%)
 Frame = +2

Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
           D DYT+Y+PDEC+A IFQ +  GDR SCSLVC+RW  +E +SR RL+L AQ+ L   +  
Sbjct: 44  DLDYTNYIPDECLACIFQSLSSGDRKSCSLVCRRWLRVEGQSRHRLSLNAQSDLVTVVPL 103

Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
           + +RF+ VT LALKC R+  SI D
Sbjct: 104 IFSRFDSVTKLALKCDRRSTSIGD 127


>KZV52087.1 hypothetical protein F511_41476 [Dorcoceras hygrometricum]
          Length = 539

 Score = 99.8 bits (247), Expect = 1e-19
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +2

Query: 689 EEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFL 868
           ++  DYT+ +PDEC+ALIFQ +  GDR  CS+VC+RW  +E KSR RLAL A + +S  L
Sbjct: 43  DQQHDYTYEIPDECLALIFQSLSSGDRKRCSMVCRRWLAVEGKSRSRLALNATHDVSAHL 102

Query: 869 SSLVTRFEGVTVLALKCSRKLRSIDD 946
             + TRF+ VT LAL+C RK  SI+D
Sbjct: 103 PVIFTRFDSVTKLALRCDRKSVSIND 128


>XP_016719093.1 PREDICTED: F-box protein SKIP2-like isoform X3 [Gossypium hirsutum]
           XP_016719094.1 PREDICTED: F-box protein SKIP2-like
           isoform X3 [Gossypium hirsutum] XP_016719095.1
           PREDICTED: F-box protein SKIP2-like isoform X3
           [Gossypium hirsutum]
          Length = 511

 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 50/94 (53%), Positives = 63/94 (67%)
 Frame = +2

Query: 665 EPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVA 844
           E +    + E  DYT  LPDEC+A +FQ +G GDRN CSLVCKRW  ++  SR RL+L A
Sbjct: 31  EGFRDQIAVEIVDYTAELPDECLAFVFQFLGPGDRNRCSLVCKRWFRVDGWSRHRLSLNA 90

Query: 845 QNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
           Q+ +   L SL TRF+ VT LAL+CSRK  S+ D
Sbjct: 91  QSEIVSSLPSLFTRFDSVTKLALRCSRKSISLTD 124


>XP_017622763.1 PREDICTED: F-box protein SKIP2 isoform X2 [Gossypium arboreum]
          Length = 513

 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 50/94 (53%), Positives = 63/94 (67%)
 Frame = +2

Query: 665 EPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVA 844
           E +    + E  DYT  LPDEC+A +FQ +G GDRN CSLVCKRW  ++  SR RL+L A
Sbjct: 31  EGFRDQIAVEIVDYTAELPDECLAFVFQFLGPGDRNRCSLVCKRWFRVDGWSRHRLSLNA 90

Query: 845 QNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
           Q+ +   L SL TRF+ VT LAL+CSRK  S+ D
Sbjct: 91  QSEIVSSLPSLFTRFDSVTKLALRCSRKSISLTD 124


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