BLASTX nr result
ID: Ephedra29_contig00011547
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00011547
(947 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABK24412.1 unknown [Picea sitchensis] 110 2e-23
XP_017982166.1 PREDICTED: F-box protein SKIP2 [Theobroma cacao] 104 2e-21
EOY32223.1 VIER F-box protein 1 [Theobroma cacao] 104 2e-21
XP_002309038.2 hypothetical protein POPTR_0006s08160g [Populus t... 104 3e-21
XP_011019921.1 PREDICTED: F-box protein SKIP2-like isoform X1 [P... 104 3e-21
XP_010665121.1 PREDICTED: F-box protein SKIP2-like [Vitis vinifera] 103 4e-21
CAN81430.1 hypothetical protein VITISV_010695 [Vitis vinifera] 103 4e-21
OAY58983.1 hypothetical protein MANES_02G222100 [Manihot esculenta] 103 6e-21
XP_010036053.1 PREDICTED: F-box protein SKIP2 [Eucalyptus grandis] 103 7e-21
XP_011019923.1 PREDICTED: F-box protein SKIP2-like isoform X3 [P... 102 1e-20
XP_011019922.1 PREDICTED: F-box protein SKIP2-like isoform X2 [P... 102 1e-20
XP_016455607.1 PREDICTED: F-box protein At1g47056-like [Nicotian... 102 2e-20
XP_009598217.1 PREDICTED: F-box protein At1g47056-like [Nicotian... 101 3e-20
CDP01289.1 unnamed protein product [Coffea canephora] 100 4e-20
AAL07231.1 putative SKP1 interacting partner SKIP2 [Arabidopsis ... 98 7e-20
XP_009791823.1 PREDICTED: F-box protein At1g47056-like [Nicotian... 100 7e-20
XP_019245150.1 PREDICTED: F-box protein At1g47056-like [Nicotian... 100 1e-19
KZV52087.1 hypothetical protein F511_41476 [Dorcoceras hygrometr... 100 1e-19
XP_016719093.1 PREDICTED: F-box protein SKIP2-like isoform X3 [G... 99 1e-19
XP_017622763.1 PREDICTED: F-box protein SKIP2 isoform X2 [Gossyp... 99 1e-19
>ABK24412.1 unknown [Picea sitchensis]
Length = 498
Score = 110 bits (274), Expect = 2e-23
Identities = 61/116 (52%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 605 MGQXXXXLPHPLIGH--HSGRIEPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSC 778
MGQ L P +G + +E ++ + D YLPDEC+A IFQK+ DRN+C
Sbjct: 1 MGQSNSSLSPPPMGLFLENSEVERFDVYPEQ---DLIVYLPDECLASIFQKLTNEDRNAC 57
Query: 779 SLVCKRWHLIESKSRQRLALVAQNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
SLVC RWH IESKSRQRL L+A+ LS L +L RFE VTVL+LKCSRK SID+
Sbjct: 58 SLVCSRWHRIESKSRQRLVLMARTELSSLLPALFMRFEHVTVLSLKCSRKFPSIDN 113
>XP_017982166.1 PREDICTED: F-box protein SKIP2 [Theobroma cacao]
Length = 538
Score = 104 bits (260), Expect = 2e-21
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = +2
Query: 701 DYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSSLV 880
D T LPDEC+A +F K+G DR++CSLVCKRW ++SKSRQRLALVA + +S +L SL
Sbjct: 29 DLTLTLPDECLAWVFGKLGCHDRSNCSLVCKRWRHVDSKSRQRLALVAGSDISPWLPSLF 88
Query: 881 TRFEGVTVLALKCSRKLRSIDD 946
+RF ++VL+LKCSRKL SIDD
Sbjct: 89 SRFSSISVLSLKCSRKLASIDD 110
>EOY32223.1 VIER F-box protein 1 [Theobroma cacao]
Length = 586
Score = 104 bits (260), Expect = 2e-21
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = +2
Query: 701 DYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSSLV 880
D T LPDEC+A +F K+G DR++CSLVCKRW ++SKSRQRLALVA + +S +L SL
Sbjct: 77 DLTLTLPDECLAWVFGKLGCHDRSNCSLVCKRWRHVDSKSRQRLALVAGSDISPWLPSLF 136
Query: 881 TRFEGVTVLALKCSRKLRSIDD 946
+RF ++VL+LKCSRKL SIDD
Sbjct: 137 SRFSSISVLSLKCSRKLASIDD 158
>XP_002309038.2 hypothetical protein POPTR_0006s08160g [Populus trichocarpa]
EEE92561.2 hypothetical protein POPTR_0006s08160g
[Populus trichocarpa]
Length = 572
Score = 104 bits (259), Expect = 3e-21
Identities = 57/103 (55%), Positives = 72/103 (69%)
Frame = +2
Query: 638 LIGHHSGRIEPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESK 817
+IG +SG I+ D D T LPDEC+ +F K+G DRNSCSLVCKRW ++SK
Sbjct: 21 IIGKNSGDIDG--------DDDLTLSLPDECLGSVFGKLGCLDRNSCSLVCKRWKCVDSK 72
Query: 818 SRQRLALVAQNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
SR RL L+A++ LS L SL++RF V+VL+LKCSRKL SIDD
Sbjct: 73 SRNRLVLLARSELSPCLPSLLSRFNTVSVLSLKCSRKLFSIDD 115
>XP_011019921.1 PREDICTED: F-box protein SKIP2-like isoform X1 [Populus euphratica]
Length = 573
Score = 104 bits (259), Expect = 3e-21
Identities = 57/103 (55%), Positives = 72/103 (69%)
Frame = +2
Query: 638 LIGHHSGRIEPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESK 817
+IG +SG I+ D D T LPDEC+ +F K+G DRNSCSLVCKRW ++SK
Sbjct: 21 IIGKNSGDIDG--------DDDLTLSLPDECLGSVFGKLGCLDRNSCSLVCKRWKCVDSK 72
Query: 818 SRQRLALVAQNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
SR RL L+A++ LS L SL++RF V+VL+LKCSRKL SIDD
Sbjct: 73 SRNRLVLLARSELSPCLPSLLSRFNTVSVLSLKCSRKLFSIDD 115
>XP_010665121.1 PREDICTED: F-box protein SKIP2-like [Vitis vinifera]
Length = 538
Score = 103 bits (258), Expect = 4e-21
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = +2
Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
D D T LPDEC+A +F K+G DRN+CSLVC+RW ++SKSRQRL L+A++ +S FL +
Sbjct: 37 DGDLTLGLPDECLAGVFGKLGCHDRNTCSLVCRRWRAVDSKSRQRLVLLARSDVSPFLPA 96
Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
L+ RF V+VL+LKCSRK+ SIDD
Sbjct: 97 LLCRFSSVSVLSLKCSRKIVSIDD 120
>CAN81430.1 hypothetical protein VITISV_010695 [Vitis vinifera]
Length = 544
Score = 103 bits (258), Expect = 4e-21
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = +2
Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
D D T LPDEC+A +F K+G DRN+CSLVC+RW ++SKSRQRL L+A++ +S FL +
Sbjct: 63 DGDLTLGLPDECLAGVFGKLGCHDRNTCSLVCRRWRAVDSKSRQRLVLLARSDVSPFLPA 122
Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
L+ RF V+VL+LKCSRK+ SIDD
Sbjct: 123 LLCRFSSVSVLSLKCSRKIVSIDD 146
>OAY58983.1 hypothetical protein MANES_02G222100 [Manihot esculenta]
Length = 513
Score = 103 bits (256), Expect = 6e-21
Identities = 53/114 (46%), Positives = 75/114 (65%)
Frame = +2
Query: 605 MGQXXXXLPHPLIGHHSGRIEPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSL 784
MGQ + + H + E + S++ D+T +LPDEC+A +F +G DRNSCSL
Sbjct: 1 MGQGTSSCSNEICKHTA---EGHSIVISKKHEDFTSFLPDECLAKVFGSLGSHDRNSCSL 57
Query: 785 VCKRWHLIESKSRQRLALVAQNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
VCKRW ++S+SR RL L+A +S L +L++RF V+VL+LKCSRKL SI+D
Sbjct: 58 VCKRWRAVDSESRYRLVLLAPCEMSQSLPALLSRFSSVSVLSLKCSRKLLSIND 111
>XP_010036053.1 PREDICTED: F-box protein SKIP2 [Eucalyptus grandis]
Length = 555
Score = 103 bits (256), Expect = 7e-21
Identities = 50/88 (56%), Positives = 67/88 (76%)
Frame = +2
Query: 683 TSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSC 862
+S + FD T LPDEC+A +F +G DR SCSLVC+RWHL++++SRQRLALVA++ ++
Sbjct: 32 SSADRFDLTLGLPDECLASVFALLGSDDRGSCSLVCRRWHLVDARSRQRLALVARSEIAP 91
Query: 863 FLSSLVTRFEGVTVLALKCSRKLRSIDD 946
L L+ RF V+VL+LKCSRKL SI D
Sbjct: 92 SLPPLLRRFGSVSVLSLKCSRKLVSIGD 119
>XP_011019923.1 PREDICTED: F-box protein SKIP2-like isoform X3 [Populus euphratica]
Length = 559
Score = 102 bits (254), Expect = 1e-20
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +2
Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
D D T LPDEC+ +F K+G DRNSCSLVCKRW ++SKSR RL L+A++ LS L S
Sbjct: 18 DDDLTLSLPDECLGSVFGKLGCLDRNSCSLVCKRWKCVDSKSRNRLVLLARSELSPCLPS 77
Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
L++RF V+VL+LKCSRKL SIDD
Sbjct: 78 LLSRFNTVSVLSLKCSRKLFSIDD 101
>XP_011019922.1 PREDICTED: F-box protein SKIP2-like isoform X2 [Populus euphratica]
Length = 559
Score = 102 bits (254), Expect = 1e-20
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +2
Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
D D T LPDEC+ +F K+G DRNSCSLVCKRW ++SKSR RL L+A++ LS L S
Sbjct: 18 DDDLTLSLPDECLGSVFGKLGCLDRNSCSLVCKRWKCVDSKSRNRLVLLARSELSPCLPS 77
Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
L++RF V+VL+LKCSRKL SIDD
Sbjct: 78 LLSRFNTVSVLSLKCSRKLFSIDD 101
>XP_016455607.1 PREDICTED: F-box protein At1g47056-like [Nicotiana tabacum]
Length = 534
Score = 102 bits (253), Expect = 2e-20
Identities = 47/84 (55%), Positives = 61/84 (72%)
Frame = +2
Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
DFDYT+Y+PDEC+A IFQ + GDR SCSLVC+RW +E +SR RL+L AQ+ L +
Sbjct: 44 DFDYTNYIPDECLACIFQSLSSGDRKSCSLVCRRWLRVEGQSRHRLSLNAQSDLVTVVPL 103
Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
+ +RF+ VT LALKC R+ SI D
Sbjct: 104 IFSRFDSVTKLALKCDRRSTSIGD 127
>XP_009598217.1 PREDICTED: F-box protein At1g47056-like [Nicotiana tomentosiformis]
Length = 534
Score = 101 bits (251), Expect = 3e-20
Identities = 47/84 (55%), Positives = 60/84 (71%)
Frame = +2
Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
DFDYT+Y+PDEC+A IFQ + GDR SCSLVC+RW +E +SR RL+L AQ+ L
Sbjct: 44 DFDYTNYIPDECLACIFQSLSSGDRKSCSLVCRRWLRVEGQSRHRLSLNAQSDLVTVAPL 103
Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
+ +RF+ VT LALKC R+ SI D
Sbjct: 104 IFSRFDSVTKLALKCDRRSTSIGD 127
>CDP01289.1 unnamed protein product [Coffea canephora]
Length = 545
Score = 100 bits (250), Expect = 4e-20
Identities = 50/94 (53%), Positives = 62/94 (65%)
Frame = +2
Query: 665 EPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVA 844
+P + T E DY LPDEC+A IFQ + GDR CSLVC+RW L+E +SR RL+L A
Sbjct: 47 DPADVFTGEGLADYISNLPDECLAYIFQSLSSGDRKRCSLVCRRWLLVEGQSRHRLSLNA 106
Query: 845 QNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
Q L F+ S+ TRF+ VT LALKC R+ SI D
Sbjct: 107 QAELLTFIPSIFTRFDAVTKLALKCDRRSASIGD 140
>AAL07231.1 putative SKP1 interacting partner SKIP2 [Arabidopsis thaliana]
Length = 304
Score = 97.8 bits (242), Expect = 7e-20
Identities = 46/84 (54%), Positives = 62/84 (73%)
Frame = +2
Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
D D+T LPDEC+A +FQ +G GDR CSLVCKRW L++ +SR RL+L A++ +S FL+S
Sbjct: 39 DRDFTGDLPDECLAHVFQFLGAGDRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTS 98
Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
+ RF+ VT LAL+C RK S+ D
Sbjct: 99 MFNRFDSVTKLALRCDRKSVSLSD 122
>XP_009791823.1 PREDICTED: F-box protein At1g47056-like [Nicotiana sylvestris]
Length = 535
Score = 100 bits (248), Expect = 7e-20
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +2
Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
D DYT+Y+PDEC+A IFQ + GDR SCSLVC+RW +E +SR RL+L AQ+ L +
Sbjct: 45 DLDYTNYIPDECLACIFQSLSSGDRKSCSLVCRRWLRVEGQSRHRLSLNAQSDLVAVVPL 104
Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
+ +RF+ VT LALKC R+ SI D
Sbjct: 105 IFSRFDSVTKLALKCDRRSTSIGD 128
>XP_019245150.1 PREDICTED: F-box protein At1g47056-like [Nicotiana attenuata]
OIT04199.1 f-box protein [Nicotiana attenuata]
Length = 534
Score = 99.8 bits (247), Expect = 1e-19
Identities = 46/84 (54%), Positives = 60/84 (71%)
Frame = +2
Query: 695 DFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFLSS 874
D DYT+Y+PDEC+A IFQ + GDR SCSLVC+RW +E +SR RL+L AQ+ L +
Sbjct: 44 DLDYTNYIPDECLACIFQSLSSGDRKSCSLVCRRWLRVEGQSRHRLSLNAQSDLVTVVPL 103
Query: 875 LVTRFEGVTVLALKCSRKLRSIDD 946
+ +RF+ VT LALKC R+ SI D
Sbjct: 104 IFSRFDSVTKLALKCDRRSTSIGD 127
>KZV52087.1 hypothetical protein F511_41476 [Dorcoceras hygrometricum]
Length = 539
Score = 99.8 bits (247), Expect = 1e-19
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +2
Query: 689 EEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVAQNGLSCFL 868
++ DYT+ +PDEC+ALIFQ + GDR CS+VC+RW +E KSR RLAL A + +S L
Sbjct: 43 DQQHDYTYEIPDECLALIFQSLSSGDRKRCSMVCRRWLAVEGKSRSRLALNATHDVSAHL 102
Query: 869 SSLVTRFEGVTVLALKCSRKLRSIDD 946
+ TRF+ VT LAL+C RK SI+D
Sbjct: 103 PVIFTRFDSVTKLALRCDRKSVSIND 128
>XP_016719093.1 PREDICTED: F-box protein SKIP2-like isoform X3 [Gossypium hirsutum]
XP_016719094.1 PREDICTED: F-box protein SKIP2-like
isoform X3 [Gossypium hirsutum] XP_016719095.1
PREDICTED: F-box protein SKIP2-like isoform X3
[Gossypium hirsutum]
Length = 511
Score = 99.4 bits (246), Expect = 1e-19
Identities = 50/94 (53%), Positives = 63/94 (67%)
Frame = +2
Query: 665 EPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVA 844
E + + E DYT LPDEC+A +FQ +G GDRN CSLVCKRW ++ SR RL+L A
Sbjct: 31 EGFRDQIAVEIVDYTAELPDECLAFVFQFLGPGDRNRCSLVCKRWFRVDGWSRHRLSLNA 90
Query: 845 QNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
Q+ + L SL TRF+ VT LAL+CSRK S+ D
Sbjct: 91 QSEIVSSLPSLFTRFDSVTKLALRCSRKSISLTD 124
>XP_017622763.1 PREDICTED: F-box protein SKIP2 isoform X2 [Gossypium arboreum]
Length = 513
Score = 99.4 bits (246), Expect = 1e-19
Identities = 50/94 (53%), Positives = 63/94 (67%)
Frame = +2
Query: 665 EPYETTTSEEDFDYTHYLPDECIALIFQKVGKGDRNSCSLVCKRWHLIESKSRQRLALVA 844
E + + E DYT LPDEC+A +FQ +G GDRN CSLVCKRW ++ SR RL+L A
Sbjct: 31 EGFRDQIAVEIVDYTAELPDECLAFVFQFLGPGDRNRCSLVCKRWFRVDGWSRHRLSLNA 90
Query: 845 QNGLSCFLSSLVTRFEGVTVLALKCSRKLRSIDD 946
Q+ + L SL TRF+ VT LAL+CSRK S+ D
Sbjct: 91 QSEIVSSLPSLFTRFDSVTKLALRCSRKSISLTD 124