BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00011435
         (841 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AIZ74344.1 polymerase subunit [Pinus massoniana]                      229   3e-73
ABK26380.1 unknown [Picea sitchensis]                                 227   4e-72
XP_010942742.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   218   1e-68
XP_002530308.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   217   2e-68
XP_020113457.1 DNA-directed RNA polymerases II, IV and V subunit...   216   7e-68
OAY51849.1 hypothetical protein MANES_04G038000 [Manihot esculenta]   216   7e-68
XP_009418594.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   214   4e-67
XP_010268240.1 PREDICTED: DNA-directed RNA polymerases II and V ...   214   5e-67
XP_006442881.1 hypothetical protein CICLE_v10022723mg [Citrus cl...   214   6e-67
XP_008779392.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   213   1e-66
OAY37772.1 hypothetical protein MANES_11G127900 [Manihot esculenta]   212   2e-66
XP_012065243.1 PREDICTED: DNA-directed RNA polymerases II and V ...   212   3e-66
XP_012441059.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   211   6e-66
XP_007022260.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   211   9e-66
XP_011628850.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   210   1e-65
OMO65787.1 RNA polymerase, Rpb8 [Corchorus capsularis]                210   2e-65
XP_012453650.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   210   2e-65
XP_016738554.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   209   3e-65
XP_016684539.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   209   5e-65
XP_016720188.1 PREDICTED: DNA-directed RNA polymerases II, IV an...   209   5e-65

>AIZ74344.1 polymerase subunit [Pinus massoniana]
          Length = 145

 Score =  229 bits (585), Expect = 3e-73
 Identities = 114/145 (78%), Positives = 126/145 (86%), Gaps = 1/145 (0%)
 Frame = +2

Query: 86  MAGIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLAL 265
           M  ++FEDIF ++RIDP+GKKFDKVSRIEARSEQFDMYMLLDVNI+VYPVSVGEKF +AL
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 266 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLM 442
           + TLNLDGTPD GYFIQ GRK+LADKYEYVM GK+YKI E GSG   KVE+  S+GGLLM
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYKISEEGSGANVKVEINASFGGLLM 120

Query: 443 LLKGDPGNLSKFELDQRLFLLMRKV 517
           LLKGDP N   FELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145


>ABK26380.1 unknown [Picea sitchensis]
          Length = 145

 Score =  227 bits (578), Expect = 4e-72
 Identities = 112/145 (77%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
 Frame = +2

Query: 86  MAGIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLAL 265
           M  ++FEDIF ++RIDP+GKKFDKVSRIEARSEQFDMYMLLDVNI+VYPVSVGEKF +AL
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 266 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLM 442
           + TLNLDGTPD GYFIQ GRK+LADKYEYVM GK+Y + E GSG   KVE+  S+GGLLM
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120

Query: 443 LLKGDPGNLSKFELDQRLFLLMRKV 517
           LLKGDP N   FELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145


>XP_010942742.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
           [Elaeis guineensis]
          Length = 145

 Score =  218 bits (555), Expect = 1e-68
 Identities = 104/145 (71%), Positives = 126/145 (86%), Gaps = 1/145 (0%)
 Frame = +2

Query: 86  MAGIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLAL 265
           M  ++FEDIF ++RIDP+GKKFDKVSRIEARSEQFDMYM LDVN E+YP+ VG+KFT+ L
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 266 SATLNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLM 442
           + TL+LDGTPD+GY++QG RK+LADK+EYVM+GK+YKI E  SG   KVE+Y S+GGLLM
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120

Query: 443 LLKGDPGNLSKFELDQRLFLLMRKV 517
           +LKGDP N + FELDQRLFLLMRKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145


>XP_002530308.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
           [Ricinus communis] XP_015581552.1 PREDICTED:
           DNA-directed RNA polymerases II, IV and V subunit 8B
           [Ricinus communis] XP_015581553.1 PREDICTED:
           DNA-directed RNA polymerases II, IV and V subunit 8B
           [Ricinus communis] EEF32075.1 DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide,
           putative [Ricinus communis]
          Length = 146

 Score =  217 bits (553), Expect = 2e-68
 Identities = 103/142 (72%), Positives = 125/142 (88%), Gaps = 1/142 (0%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           ++FEDIFV+ ++DP+GKKFDKVSRIEA S+  DM+M LDVN E+YP++VG+KFT+AL+ T
Sbjct: 5   VLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLK 451
           LNLDGTPDTGY+ QG RKTLADKYEY+MNGK+YKI E GSG A K E+ VSYGGLLMLL+
Sbjct: 65  LNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLR 124

Query: 452 GDPGNLSKFELDQRLFLLMRKV 517
           GDP ++S FELDQRLFLLMRK+
Sbjct: 125 GDPSHVSHFELDQRLFLLMRKL 146


>XP_020113457.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Ananas
           comosus] XP_020113458.1 DNA-directed RNA polymerases II,
           IV and V subunit 8B-like [Ananas comosus] XP_020113459.1
           DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Ananas comosus] OAY68524.1 DNA-directed RNA
           polymerases II, IV and V subunit 8B [Ananas comosus]
          Length = 146

 Score =  216 bits (550), Expect = 7e-68
 Identities = 104/146 (71%), Positives = 128/146 (87%), Gaps = 2/146 (1%)
 Frame = +2

Query: 86  MAGIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLAL 265
           M  ++FEDIFV+ R+DP+GKKFDKVSRIEARSEQFDM+M LD+N E+YP+ VG+KFT+ L
Sbjct: 1   MVELLFEDIFVLMRLDPDGKKFDKVSRIEARSEQFDMFMQLDINTEIYPMHVGDKFTMVL 60

Query: 266 SATLNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDE-SGSGVAAKVELYVSYGGLL 439
           + TLNLDGTPD+GYF+QG RK+LADK+EYVM+GK+YKI E S SG  AKVE+Y S+GGLL
Sbjct: 61  APTLNLDGTPDSGYFVQGNRKSLADKFEYVMHGKLYKISEDSSSGKNAKVEIYASFGGLL 120

Query: 440 MLLKGDPGNLSKFELDQRLFLLMRKV 517
           M+LKGDP N + FELDQR+FLL+RKV
Sbjct: 121 MMLKGDPSNAANFELDQRIFLLIRKV 146


>OAY51849.1 hypothetical protein MANES_04G038000 [Manihot esculenta]
          Length = 146

 Score =  216 bits (550), Expect = 7e-68
 Identities = 101/142 (71%), Positives = 127/142 (89%), Gaps = 1/142 (0%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           ++FEDIF++ +++P+GKKFDKVSRIEA S+  DM+M LDVN E+YP++VG+KFT+AL+ T
Sbjct: 5   VLFEDIFLVDKLNPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLK 451
           LNLDGTPDTGY+IQG RKTLADKYEY+M+GK+YKI E GSG A K E+YVSYGGLLM+LK
Sbjct: 65  LNLDGTPDTGYYIQGARKTLADKYEYIMHGKLYKISEEGSGKAVKAEIYVSYGGLLMMLK 124

Query: 452 GDPGNLSKFELDQRLFLLMRKV 517
           GDP ++S FELDQRLFLL+RK+
Sbjct: 125 GDPSHVSHFELDQRLFLLIRKL 146


>XP_009418594.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
           [Musa acuminata subsp. malaccensis]
          Length = 146

 Score =  214 bits (545), Expect = 4e-67
 Identities = 104/146 (71%), Positives = 127/146 (86%), Gaps = 2/146 (1%)
 Frame = +2

Query: 86  MAGIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLAL 265
           M  ++FEDIF ++R+DP+GKKFDKVSRIEARSEQFDMYM LDVN E+YP++VG+KFT+ L
Sbjct: 1   MVELLFEDIFTLTRLDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLNVGDKFTMVL 60

Query: 266 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDESGS-GVAAKVELYVSYGGLL 439
           + TL+LDGTPD+GYF Q GRK+LADK+EYVM+GK+YKI E  S G   KVE+Y S+GGLL
Sbjct: 61  TPTLSLDGTPDSGYFTQAGRKSLADKFEYVMHGKLYKISEEASGGPNVKVEIYASFGGLL 120

Query: 440 MLLKGDPGNLSKFELDQRLFLLMRKV 517
           M+LKGDP N ++FELDQRLFLLMRKV
Sbjct: 121 MMLKGDPSNAAQFELDQRLFLLMRKV 146


>XP_010268240.1 PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
           [Nelumbo nucifera] XP_010268241.1 PREDICTED:
           DNA-directed RNA polymerases II and V subunit 8A-like
           [Nelumbo nucifera]
          Length = 145

 Score =  214 bits (544), Expect = 5e-67
 Identities = 103/145 (71%), Positives = 122/145 (84%), Gaps = 1/145 (0%)
 Frame = +2

Query: 86  MAGIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLAL 265
           M  ++FEDIF + +IDP+GKKFDKVSRI A SEQFDMYM LDVN E+YP+ V +KFT+ L
Sbjct: 1   MVDLLFEDIFTVKQIDPDGKKFDKVSRIVATSEQFDMYMQLDVNTEIYPLRVDDKFTMVL 60

Query: 266 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLM 442
           + TL+LDGTPD+GY+ Q GRK+LADK+EYVM+GK+YKI E GSG   KVE+Y SYGGLLM
Sbjct: 61  APTLSLDGTPDSGYYTQVGRKSLADKFEYVMHGKLYKISEEGSGANVKVEIYASYGGLLM 120

Query: 443 LLKGDPGNLSKFELDQRLFLLMRKV 517
           LLKGDP N + FELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAANFELDQRLFLLMRKV 145


>XP_006442881.1 hypothetical protein CICLE_v10022723mg [Citrus clementina]
           XP_006478800.1 PREDICTED: DNA-directed RNA polymerases
           II and V subunit 8A [Citrus sinensis] ESR56121.1
           hypothetical protein CICLE_v10022723mg [Citrus
           clementina] KDO52423.1 hypothetical protein
           CISIN_1g032138mg [Citrus sinensis]
          Length = 146

 Score =  214 bits (544), Expect = 6e-67
 Identities = 102/142 (71%), Positives = 124/142 (87%), Gaps = 1/142 (0%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           ++FEDIFV+ +IDP+GKKFDKVSRIEA S+  DMYMLLDVN E+YP+ VG+KFT+AL+ T
Sbjct: 5   VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLK 451
           LNLDGTPDTGY+  G RKTLADKYEY+M+GK++KI + GSG + K E+YVSYGGLLM+LK
Sbjct: 65  LNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLK 124

Query: 452 GDPGNLSKFELDQRLFLLMRKV 517
           GDP  +S FELDQRLFLLMRK+
Sbjct: 125 GDPSYVSHFELDQRLFLLMRKL 146


>XP_008779392.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Phoenix dactylifera] XP_017696516.1
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X2 [Phoenix dactylifera]
          Length = 145

 Score =  213 bits (542), Expect = 1e-66
 Identities = 103/145 (71%), Positives = 124/145 (85%), Gaps = 1/145 (0%)
 Frame = +2

Query: 86  MAGIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLAL 265
           M  ++FEDIF ++R+DP+GKKFDKV+RIEARSEQFDM M LDVN EVYP+ VG+KFT+ L
Sbjct: 1   MVELLFEDIFTLTRLDPDGKKFDKVTRIEARSEQFDMSMQLDVNTEVYPLHVGDKFTMVL 60

Query: 266 SATLNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLM 442
           + TL+LDGTPD+GY+ QG RK+LADK+EYVM+GK+YKI E  SG   KVELY S+GGLLM
Sbjct: 61  APTLSLDGTPDSGYYTQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVELYASFGGLLM 120

Query: 443 LLKGDPGNLSKFELDQRLFLLMRKV 517
           +LKGDP N + FELDQRLFLLMRKV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145


>OAY37772.1 hypothetical protein MANES_11G127900 [Manihot esculenta]
          Length = 146

 Score =  212 bits (540), Expect = 2e-66
 Identities = 100/142 (70%), Positives = 125/142 (88%), Gaps = 1/142 (0%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           ++FEDIFV+ +++P+GKKFDKVSRIEA S+  DM+M LDVN E+YP+ VG+KFT+AL+ T
Sbjct: 5   VLFEDIFVVDKLNPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMDVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLK 451
           LNLDGTPDTGY+IQG R+TLADKYEY+M+GK+YKI E GSG   K E+YVSYGGLLM+LK
Sbjct: 65  LNLDGTPDTGYYIQGARRTLADKYEYIMHGKLYKISEEGSGKKIKGEIYVSYGGLLMMLK 124

Query: 452 GDPGNLSKFELDQRLFLLMRKV 517
           GDP ++S FELDQRLFLL+RK+
Sbjct: 125 GDPSHVSHFELDQRLFLLIRKL 146


>XP_012065243.1 PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
           [Jatropha curcas] KDP43918.1 hypothetical protein
           JCGZ_20928 [Jatropha curcas]
          Length = 146

 Score =  212 bits (539), Expect = 3e-66
 Identities = 99/142 (69%), Positives = 126/142 (88%), Gaps = 1/142 (0%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           ++FEDIFV+ ++DP+GKKFDKVSRIEA S+  DM+M LDVN E+YP++VG+KFT+AL+ T
Sbjct: 5   LLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNSEIYPMAVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLK 451
           LNLDGTPDTGY+ QG RKTLADKYEY+M+GK+YKI E GSG   K E++VSYGGLLM+LK
Sbjct: 65  LNLDGTPDTGYYTQGARKTLADKYEYIMHGKLYKISEEGSGRNVKAEIFVSYGGLLMMLK 124

Query: 452 GDPGNLSKFELDQRLFLLMRKV 517
           GDP ++++FELDQRLFLL+RK+
Sbjct: 125 GDPSHVNQFELDQRLFLLIRKL 146


>XP_012441059.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Gossypium raimondii] KJB60450.1 hypothetical
           protein B456_009G353600 [Gossypium raimondii]
          Length = 145

 Score =  211 bits (537), Expect = 6e-66
 Identities = 99/141 (70%), Positives = 122/141 (86%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           I+FEDIFV+ ++DP+GKKFDKV+RIEARS+  DMYM LDVN E+YP+ VG+KFT+AL+ T
Sbjct: 5   ILFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMYMHLDVNTEIYPMHVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQGRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLKG 454
           LNLDGTPDTGY+  GRK+LADKYEYVM+GK+YKI +  SG   K ELYVSYGGLLMLL+G
Sbjct: 65  LNLDGTPDTGYYTPGRKSLADKYEYVMHGKLYKITDDASGKGLKAELYVSYGGLLMLLRG 124

Query: 455 DPGNLSKFELDQRLFLLMRKV 517
           +  ++S FELDQR+FLLMRK+
Sbjct: 125 EASHVSHFELDQRIFLLMRKL 145


>XP_007022260.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
           isoform X2 [Theobroma cacao] EOY13785.1 RNA polymerase
           Rpb8 isoform 1 [Theobroma cacao]
          Length = 145

 Score =  211 bits (536), Expect = 9e-66
 Identities = 97/141 (68%), Positives = 123/141 (87%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           I FEDIFV+ ++DP+GKKFDKV+RIEARS+  DM+M LDVN E+YP+ VG+KFT+AL+ T
Sbjct: 5   IFFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQGRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLKG 454
           LNLDGTPDTGY+  GRK+LADKYEYVM+GK+YK+ + GSG   K E+YVSYGGLLM+L+G
Sbjct: 65  LNLDGTPDTGYYTPGRKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLMMLRG 124

Query: 455 DPGNLSKFELDQRLFLLMRKV 517
           +  ++S+FELDQRLFLLMRK+
Sbjct: 125 EASHVSQFELDQRLFLLMRKL 145


>XP_011628850.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
           [Amborella trichopoda] XP_011628851.1 PREDICTED:
           DNA-directed RNA polymerases II, IV and V subunit 8B
           [Amborella trichopoda]
          Length = 144

 Score =  210 bits (535), Expect = 1e-65
 Identities = 103/145 (71%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
 Frame = +2

Query: 86  MAGIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLAL 265
           M  ++FEDIF +++++P+GKKFDKVSRIEARSEQFDM+M LDVN EVYP++VG+KFT+ L
Sbjct: 1   MVELLFEDIFTLTKLNPDGKKFDKVSRIEARSEQFDMFMQLDVNTEVYPLNVGDKFTMVL 60

Query: 266 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLM 442
           + TL+LDGTPDTGYF Q GRK+LADK+EYVM+GK+YKI E  SG   KVE+Y S+GGLLM
Sbjct: 61  APTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYKISED-SGTNVKVEIYASFGGLLM 119

Query: 443 LLKGDPGNLSKFELDQRLFLLMRKV 517
           LL+GDP N   FELDQRLFLLMRKV
Sbjct: 120 LLRGDPSNAVNFELDQRLFLLMRKV 144


>OMO65787.1 RNA polymerase, Rpb8 [Corchorus capsularis]
          Length = 145

 Score =  210 bits (534), Expect = 2e-65
 Identities = 97/141 (68%), Positives = 124/141 (87%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           ++FEDIFV++++DP+GKKFDKV+RIEA SE  DM+M LDVN E+YP+ VG+KFT+AL+ T
Sbjct: 5   VLFEDIFVVNKLDPDGKKFDKVTRIEATSENCDMFMHLDVNTEIYPMHVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQGRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLKG 454
           LNLDGTPDTGYF  GRK+LADKYEYVM+GK+YKI + GSG   K E+YVSYGGLLM+L+G
Sbjct: 65  LNLDGTPDTGYFTPGRKSLADKYEYVMHGKLYKITDGGSGKGLKAEVYVSYGGLLMMLRG 124

Query: 455 DPGNLSKFELDQRLFLLMRKV 517
           +  ++S+FELDQRLFLL+RK+
Sbjct: 125 EASHVSQFELDQRLFLLIRKL 145


>XP_012453650.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Gossypium raimondii] KJB12770.1 hypothetical
           protein B456_002G036100 [Gossypium raimondii]
          Length = 145

 Score =  210 bits (534), Expect = 2e-65
 Identities = 99/141 (70%), Positives = 122/141 (86%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           I+FEDIFV+ ++DP+GKKFDKV+RIEARS+  DM+M LDVN E+YP+ VG+KFT+ALS T
Sbjct: 5   ILFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNTEIYPMHVGDKFTMALSHT 64

Query: 275 LNLDGTPDTGYFIQGRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLKG 454
           LNLDGTPDTGYF  GRK+LADKYEYVM+GK+YKI +  SG   K E+YVSYGGLLMLL+G
Sbjct: 65  LNLDGTPDTGYFNPGRKSLADKYEYVMHGKLYKISDDSSGKGLKAEIYVSYGGLLMLLRG 124

Query: 455 DPGNLSKFELDQRLFLLMRKV 517
           +  ++S FELDQRLFLL+RK+
Sbjct: 125 EASHVSHFELDQRLFLLIRKL 145


>XP_016738554.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Gossypium hirsutum]
          Length = 145

 Score =  209 bits (533), Expect = 3e-65
 Identities = 98/141 (69%), Positives = 122/141 (86%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           I+FEDIFV+ ++DP+GKKFDKV+RIEARS+  DM+M LDVN E+YP+ VG+KFT+AL+ T
Sbjct: 5   ILFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNTEIYPMHVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQGRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLKG 454
           LNLDGTPDTGY+  GRK+LADKYEYVM+GK+YKI +  SG   K ELYVSYGGLLMLL+G
Sbjct: 65  LNLDGTPDTGYYTPGRKSLADKYEYVMHGKLYKITDDASGKGLKAELYVSYGGLLMLLRG 124

Query: 455 DPGNLSKFELDQRLFLLMRKV 517
           +  ++S FELDQR+FLLMRK+
Sbjct: 125 EASHVSHFELDQRIFLLMRKL 145


>XP_016684539.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Gossypium hirsutum]
          Length = 145

 Score =  209 bits (531), Expect = 5e-65
 Identities = 97/141 (68%), Positives = 122/141 (86%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           I+FEDIF++ ++DP+GKKFDKV+RIEARS+  DMYM LDVN E+YP+ VG+KFT+AL+ T
Sbjct: 5   ILFEDIFLVDKLDPDGKKFDKVTRIEARSQNCDMYMHLDVNTEIYPMHVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQGRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLKG 454
           LNLDGTPDTGY+  GRK+LADKYEYVM+GK+YKI +  SG   K E+YVSYGGLLMLL+G
Sbjct: 65  LNLDGTPDTGYYTPGRKSLADKYEYVMHGKLYKITDDASGKGLKAEVYVSYGGLLMLLRG 124

Query: 455 DPGNLSKFELDQRLFLLMRKV 517
           +  ++S FELDQR+FLLMRK+
Sbjct: 125 EASHVSHFELDQRIFLLMRKL 145


>XP_016720188.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Gossypium hirsutum] XP_016730354.1 PREDICTED:
           DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Gossypium hirsutum] XP_017616707.1 PREDICTED:
           DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Gossypium arboreum]
          Length = 145

 Score =  209 bits (531), Expect = 5e-65
 Identities = 98/141 (69%), Positives = 122/141 (86%)
 Frame = +2

Query: 95  IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTLALSAT 274
           I+FEDIFV+ ++DP+GKKFDKV+RIEARS+  DM+M LDVN E+YP+ VG+KFT+AL+ T
Sbjct: 5   ILFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNTEIYPMHVGDKFTMALAHT 64

Query: 275 LNLDGTPDTGYFIQGRKTLADKYEYVMNGKVYKIDESGSGVAAKVELYVSYGGLLMLLKG 454
           LNLDGTPDTGYF  GRK+LADKYEYVM+GK+YKI +  SG   K E+YVSYGGLLMLL+G
Sbjct: 65  LNLDGTPDTGYFNPGRKSLADKYEYVMHGKLYKISDDSSGKGLKAEIYVSYGGLLMLLRG 124

Query: 455 DPGNLSKFELDQRLFLLMRKV 517
           +  ++S FELDQRLFLL+RK+
Sbjct: 125 EASHVSHFELDQRLFLLIRKL 145