BLASTX nr result
ID: Ephedra29_contig00011215
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00011215
(1079 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABR17775.1 unknown [Picea sitchensis] 258 9e-80
CBI37183.3 unnamed protein product, partial [Vitis vinifera] 195 7e-58
XP_016550041.1 PREDICTED: pre-mRNA-processing factor 39-like [Ca... 192 1e-55
XP_002272685.1 PREDICTED: pre-mRNA-processing factor 39 isoform ... 204 2e-55
XP_019256953.1 PREDICTED: pre-mRNA-processing factor 39 [Nicotia... 203 2e-55
XP_019076729.1 PREDICTED: pre-mRNA-processing factor 39 isoform ... 204 2e-55
XP_009802614.1 PREDICTED: pre-mRNA-processing factor 39 [Nicotia... 200 4e-54
XP_016477133.1 PREDICTED: pre-mRNA-processing factor 39-like [Ni... 200 5e-54
ACJ86238.1 unknown [Medicago truncatula] 189 8e-54
XP_011459709.1 PREDICTED: pre-mRNA-processing factor 39 [Fragari... 199 1e-53
XP_016466924.1 PREDICTED: pre-mRNA-processing factor 39 [Nicotia... 198 1e-53
XP_015087759.1 PREDICTED: pre-mRNA-processing factor 39 isoform ... 198 2e-53
XP_004247135.1 PREDICTED: pre-mRNA-processing factor 39 isoform ... 198 2e-53
XP_003521310.1 PREDICTED: pre-mRNA-processing factor 39-like iso... 197 6e-53
KVI03866.1 RNA-processing protein, HAT helix [Cynara cardunculus... 194 6e-53
KHN10777.1 Pre-mRNA-processing factor 39 [Glycine soja] 197 7e-53
XP_010326347.1 PREDICTED: pre-mRNA-processing factor 39 isoform ... 196 8e-53
XP_018807878.1 PREDICTED: pre-mRNA-processing factor 39-like iso... 195 1e-52
XP_015901157.1 PREDICTED: pre-mRNA-processing factor 39 isoform ... 196 2e-52
XP_015901156.1 PREDICTED: pre-mRNA-processing factor 39 isoform ... 196 2e-52
>ABR17775.1 unknown [Picea sitchensis]
Length = 381
Score = 258 bits (658), Expect = 9e-80
Identities = 155/311 (49%), Positives = 188/311 (60%), Gaps = 54/311 (17%)
Frame = -2
Query: 772 MEEQNQSVVEGAQA-------VDYNAVDNATGVAQPMDFSVAQDSQLKDV---------- 644
M + N+ V E A VDY A D AT + F+ Q+ ++ V
Sbjct: 25 MSDANKYVTENVSALGQHPPVVDYEAAD-ATQLPDGSSFTQHQEPVMEQVPLPGTYADVA 83
Query: 643 -STVPDGNAYANHEAATLEQSGADNNVYGSSD----------------------PSSNVE 533
+ + DG+ Y+ H+ + ++ + N VYG +D P S V
Sbjct: 84 VTGLSDGDNYSRHQDSAMDPASTAN-VYGIADNSGLTDGSKYGLTEQEPTADQAPPSTVY 142
Query: 532 TSAVDAATAGYDANSYAGE-HAVMTEQGSVPTDYASA------DGVQYAASEQTADMNGN 374
+A A+ YDA Y G+ + M +Q + TDY S D Q+ ++E AD NGN
Sbjct: 143 QAA--GASGNYDATKYMGDTESAMVDQAPLSTDYGSTVAVAMPDANQFVSAEHHADENGN 200
Query: 373 ---GENKEQGQPAYEENP----EEERLWSIVRANSADFNAWTALIQETEKSPEEHLIPKV 215
GENKE QP YEE P EEERLWSIVRANSADFNAWT+LIQETEK+ EE+L PK+
Sbjct: 201 IVSGENKEHEQPQYEETPAITTEEERLWSIVRANSADFNAWTSLIQETEKTAEEYL-PKI 259
Query: 214 RKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEVYERAVQAVTYSVDIWVHYVTFAM 35
RKVYDAFLAEFPLCYGYWKKYADHEAR G+ EKIVEVYERAVQAVTYSVDIW+HY FAM
Sbjct: 260 RKVYDAFLAEFPLCYGYWKKYADHEARSGSAEKIVEVYERAVQAVTYSVDIWMHYAIFAM 319
Query: 34 STYEDPDTIRR 2
STYEDP+TIRR
Sbjct: 320 STYEDPETIRR 330
>CBI37183.3 unnamed protein product, partial [Vitis vinifera]
Length = 190
Score = 195 bits (495), Expect = 7e-58
Identities = 108/188 (57%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
Frame = -2
Query: 562 GSSDPSSNVETSAVDAATAGYDANSYAGEHAVMTEQGSVPT-DYASADGVQYAASEQTAD 386
G+++ SSN+ + + A AGYD++ +TE + P+ D +A V AA E
Sbjct: 15 GTTETSSNLAAAELSQA-AGYDSSVNGN---AITEARNFPSVDNGNASDVGGAAVEP--- 67
Query: 385 MNGNGENKEQGQPAYEENPEEERLWSIVRANSADFNAWTALIQETEKSPEEHLIPKVRKV 206
+ +E PA + EE+RLWSIVRANS DFNAWTALI+ETEK E++++ K+R+V
Sbjct: 68 -----QFEEGSVPAM--SAEEDRLWSIVRANSLDFNAWTALIEETEKIAEDNIL-KIRRV 119
Query: 205 YDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEVYERAVQAVTYSVDIWVHYVTFAMSTY 26
YDAFLAEFPLCYGYWKKYADHEAR G+ EK+VEVYERAVQ VTYSVDIW+HY FA+STY
Sbjct: 120 YDAFLAEFPLCYGYWKKYADHEARLGSIEKVVEVYERAVQGVTYSVDIWLHYCIFAISTY 179
Query: 25 EDPDTIRR 2
DPDTIRR
Sbjct: 180 GDPDTIRR 187
>XP_016550041.1 PREDICTED: pre-mRNA-processing factor 39-like [Capsicum annuum]
Length = 290
Score = 192 bits (489), Expect = 1e-55
Identities = 107/214 (50%), Positives = 136/214 (63%)
Frame = -2
Query: 643 STVPDGNAYANHEAATLEQSGADNNVYGSSDPSSNVETSAVDAATAGYDANSYAGEHAVM 464
+ + GN Y + +T +Q GA Y DPS ++ AA A S
Sbjct: 58 TNIEAGNPYTTDQVST-QQEGATAMSY---DPSQDL------AALADAPVGSSQVTDCES 107
Query: 463 TEQGSVPTDYASADGVQYAASEQTADMNGNGENKEQGQPAYEENPEEERLWSIVRANSAD 284
+ G+ + V A + +D++G+ N Q + +PEEERLWSIVR NS D
Sbjct: 108 SANGNNTAEERDIAAVGIAENGIASDVHGSS-NMHQPEDGLVLSPEEERLWSIVRTNSLD 166
Query: 283 FNAWTALIQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEV 104
F+AWTALI+ETEK E +++ K+RKVYDAFLAEFPLCYGYWKKYADHEAR G+ +K+VEV
Sbjct: 167 FSAWTALIEETEKMSEGNIL-KIRKVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEV 225
Query: 103 YERAVQAVTYSVDIWVHYVTFAMSTYEDPDTIRR 2
YERAVQ VTYSVD+W+HY FA+STY DP TIRR
Sbjct: 226 YERAVQGVTYSVDMWLHYCVFAISTYGDPGTIRR 259
>XP_002272685.1 PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Vitis
vinifera]
Length = 832
Score = 204 bits (518), Expect = 2e-55
Identities = 125/248 (50%), Positives = 160/248 (64%), Gaps = 7/248 (2%)
Frame = -2
Query: 724 YNAVDNAT--GVAQPMDFSVAQDSQLKDVSTVPDGNAYANHEAATLEQSGADNNVY---- 563
+ AVD T G A P D + + L D S + +GN Y + T+ Q + Y
Sbjct: 38 FAAVDTRTLAGSAAPTDAAYS----LTDGSNLGEGNTYGT-DPNTVMQEAPGSITYEASA 92
Query: 562 GSSDPSSNVETSAVDAATAGYDANSYAGEHAVMTEQGSVPT-DYASADGVQYAASEQTAD 386
G+++ SSN+ + + A AGYD++ +TE + P+ D +A V AA E
Sbjct: 93 GTTETSSNLAAAELSQA-AGYDSSVNGN---AITEARNFPSVDNGNASDVGGAAVEP--- 145
Query: 385 MNGNGENKEQGQPAYEENPEEERLWSIVRANSADFNAWTALIQETEKSPEEHLIPKVRKV 206
+ +E PA + EE+RLWSIVRANS DFNAWTALI+ETEK E++++ K+R+V
Sbjct: 146 -----QFEEGSVPAM--SAEEDRLWSIVRANSLDFNAWTALIEETEKIAEDNIL-KIRRV 197
Query: 205 YDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEVYERAVQAVTYSVDIWVHYVTFAMSTY 26
YDAFLAEFPLCYGYWKKYADHEAR G+ EK+VEVYERAVQ VTYSVDIW+HY FA+STY
Sbjct: 198 YDAFLAEFPLCYGYWKKYADHEARLGSIEKVVEVYERAVQGVTYSVDIWLHYCIFAISTY 257
Query: 25 EDPDTIRR 2
DPDTIRR
Sbjct: 258 GDPDTIRR 265
>XP_019256953.1 PREDICTED: pre-mRNA-processing factor 39 [Nicotiana attenuata]
OIS95919.1 hypothetical protein A4A49_30278 [Nicotiana
attenuata]
Length = 812
Score = 203 bits (517), Expect = 2e-55
Identities = 111/214 (51%), Positives = 141/214 (65%)
Frame = -2
Query: 643 STVPDGNAYANHEAATLEQSGADNNVYGSSDPSSNVETSAVDAATAGYDANSYAGEHAVM 464
S V GN Y +A + +Q GA Y +S + +E +A ++ A +S G +
Sbjct: 58 SNVEAGNLYTT-DAVSTQQEGATAMTYEASQDLAALEDAAAGSSQAAVYDSSANGNNT-- 114
Query: 463 TEQGSVPTDYASADGVQYAASEQTADMNGNGENKEQGQPAYEENPEEERLWSIVRANSAD 284
TE + A +E +D++GN N Q + +PEEERLWSIVR NS D
Sbjct: 115 TEARDI------------AENEIASDVHGNS-NMHQPEDGLALSPEEERLWSIVRTNSLD 161
Query: 283 FNAWTALIQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEV 104
FNAWT+LI+ETEK E +++ K+RKVYDAFLAEFPLCYGYWKKYADHEAR G+ +K+VEV
Sbjct: 162 FNAWTSLIEETEKMSEGNIL-KIRKVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEV 220
Query: 103 YERAVQAVTYSVDIWVHYVTFAMSTYEDPDTIRR 2
YERAVQ VTYSVD+W+HY FA+STY DPDTIRR
Sbjct: 221 YERAVQGVTYSVDMWLHYCVFAISTYGDPDTIRR 254
>XP_019076729.1 PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Vitis
vinifera]
Length = 851
Score = 204 bits (518), Expect = 2e-55
Identities = 125/248 (50%), Positives = 160/248 (64%), Gaps = 7/248 (2%)
Frame = -2
Query: 724 YNAVDNAT--GVAQPMDFSVAQDSQLKDVSTVPDGNAYANHEAATLEQSGADNNVY---- 563
+ AVD T G A P D + + L D S + +GN Y + T+ Q + Y
Sbjct: 57 FAAVDTRTLAGSAAPTDAAYS----LTDGSNLGEGNTYGT-DPNTVMQEAPGSITYEASA 111
Query: 562 GSSDPSSNVETSAVDAATAGYDANSYAGEHAVMTEQGSVPT-DYASADGVQYAASEQTAD 386
G+++ SSN+ + + A AGYD++ +TE + P+ D +A V AA E
Sbjct: 112 GTTETSSNLAAAELSQA-AGYDSSVNGN---AITEARNFPSVDNGNASDVGGAAVEP--- 164
Query: 385 MNGNGENKEQGQPAYEENPEEERLWSIVRANSADFNAWTALIQETEKSPEEHLIPKVRKV 206
+ +E PA + EE+RLWSIVRANS DFNAWTALI+ETEK E++++ K+R+V
Sbjct: 165 -----QFEEGSVPAM--SAEEDRLWSIVRANSLDFNAWTALIEETEKIAEDNIL-KIRRV 216
Query: 205 YDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEVYERAVQAVTYSVDIWVHYVTFAMSTY 26
YDAFLAEFPLCYGYWKKYADHEAR G+ EK+VEVYERAVQ VTYSVDIW+HY FA+STY
Sbjct: 217 YDAFLAEFPLCYGYWKKYADHEARLGSIEKVVEVYERAVQGVTYSVDIWLHYCIFAISTY 276
Query: 25 EDPDTIRR 2
DPDTIRR
Sbjct: 277 GDPDTIRR 284
>XP_009802614.1 PREDICTED: pre-mRNA-processing factor 39 [Nicotiana sylvestris]
Length = 812
Score = 200 bits (508), Expect = 4e-54
Identities = 108/214 (50%), Positives = 138/214 (64%)
Frame = -2
Query: 643 STVPDGNAYANHEAATLEQSGADNNVYGSSDPSSNVETSAVDAATAGYDANSYAGEHAVM 464
S V GN Y +A + +Q GA Y +S + +E +A ++ A +S G +
Sbjct: 58 SNVEAGNLYTA-DAVSTQQEGATAMTYEASQDLAALEDAAAGSSQAAVYDSSANGNSTI- 115
Query: 463 TEQGSVPTDYASADGVQYAASEQTADMNGNGENKEQGQPAYEENPEEERLWSIVRANSAD 284
+ A + +D++GN N Q + +PEEERLWSIVR NS D
Sbjct: 116 -------------EARDIAENGIASDVHGNS-NMHQPEDGLALSPEEERLWSIVRTNSLD 161
Query: 283 FNAWTALIQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEV 104
FNAWT+LI+ETEK E +++ K+RKVYDAFLAEFPLCYGYWKKYADHEAR G+ +K+VEV
Sbjct: 162 FNAWTSLIEETEKMSEGNIL-KIRKVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEV 220
Query: 103 YERAVQAVTYSVDIWVHYVTFAMSTYEDPDTIRR 2
YERAVQ VTYSVD+W+HY FA+STY DPDTIRR
Sbjct: 221 YERAVQGVTYSVDMWLHYCVFAISTYGDPDTIRR 254
>XP_016477133.1 PREDICTED: pre-mRNA-processing factor 39-like [Nicotiana tabacum]
Length = 839
Score = 200 bits (508), Expect = 5e-54
Identities = 108/214 (50%), Positives = 138/214 (64%)
Frame = -2
Query: 643 STVPDGNAYANHEAATLEQSGADNNVYGSSDPSSNVETSAVDAATAGYDANSYAGEHAVM 464
S V GN Y +A + +Q GA Y +S + +E +A ++ A +S G +
Sbjct: 58 SNVEAGNLYTA-DAVSTQQEGATAMTYEASQDLAALEDAAAGSSQAAVYDSSANGNSTI- 115
Query: 463 TEQGSVPTDYASADGVQYAASEQTADMNGNGENKEQGQPAYEENPEEERLWSIVRANSAD 284
+ A + +D++GN N Q + +PEEERLWSIVR NS D
Sbjct: 116 -------------EARDIAENGIASDVHGNS-NMHQPEDGLALSPEEERLWSIVRTNSLD 161
Query: 283 FNAWTALIQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEV 104
FNAWT+LI+ETEK E +++ K+RKVYDAFLAEFPLCYGYWKKYADHEAR G+ +K+VEV
Sbjct: 162 FNAWTSLIEETEKMSEGNIL-KIRKVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEV 220
Query: 103 YERAVQAVTYSVDIWVHYVTFAMSTYEDPDTIRR 2
YERAVQ VTYSVD+W+HY FA+STY DPDTIRR
Sbjct: 221 YERAVQGVTYSVDMWLHYCVFAISTYGDPDTIRR 254
>ACJ86238.1 unknown [Medicago truncatula]
Length = 332
Score = 189 bits (480), Expect = 8e-54
Identities = 106/230 (46%), Positives = 144/230 (62%), Gaps = 16/230 (6%)
Frame = -2
Query: 643 STVPDGNAYANHEAATLEQSG------ADNNVYGSSDPSSNVETS------AVDAATAGY 500
+ VP A AA SG D N Y + DP+S ++ + AA
Sbjct: 35 ANVPAPAEIAGEAAAAQPNSGYAFAYSGDGNAYTAGDPNSVLQAQFSATNESKQAAEVPN 94
Query: 499 DANSYAGEHAVMTEQGSVPTDYASADGVQYAASEQTADMNGNGE---NKEQGQPAYEE-N 332
+ +S G+ A+ + V D++S +G + + + N + +++Q AY +
Sbjct: 95 EDSSLVGKEAM--DSAMVSADHSSVNGSVDTVGLENGNASENVDESADEKQLTDAYAALS 152
Query: 331 PEEERLWSIVRANSADFNAWTALIQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKY 152
EE+RLW+IV ANS+DF AWT+LI ETEK E +++ K+R+VYDAFLAEFPLCYGYWKKY
Sbjct: 153 AEEDRLWNIVTANSSDFTAWTSLIDETEKVAENNIL-KMRRVYDAFLAEFPLCYGYWKKY 211
Query: 151 ADHEARYGTPEKIVEVYERAVQAVTYSVDIWVHYVTFAMSTYEDPDTIRR 2
ADHEAR G+ +K+VEVYERAVQ VTYSVD+W+HY FA+STY DPDT+RR
Sbjct: 212 ADHEARLGSADKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRR 261
>XP_011459709.1 PREDICTED: pre-mRNA-processing factor 39 [Fragaria vesca subsp.
vesca]
Length = 816
Score = 199 bits (505), Expect = 1e-53
Identities = 114/222 (51%), Positives = 143/222 (64%), Gaps = 9/222 (4%)
Frame = -2
Query: 640 TVPDGNAYANHEAATLEQSGADNNVYGSSDPSSNVETSAVDAATAGYDANSYAGEHAVMT 461
T DG+AY+ + +++S + Y S + AV AG N + EH MT
Sbjct: 52 TPGDGHAYSVDSDSVMQES----HTYASYEAQP-----AVGVTDAG--GNVASSEHEAMT 100
Query: 460 EQGSVPTDYASADGVQYAASEQTADMNGNGE---------NKEQGQPAYEENPEEERLWS 308
+ D ASA+GV + T GNG+ + +Q + EE+RLW+
Sbjct: 101 SSQAASYD-ASANGVA-TSGVGTVSSVGNGDASDNMAGSVDTQQVVDGSAMSAEEDRLWN 158
Query: 307 IVRANSADFNAWTALIQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYG 128
IVR NS DFNAWTALI+ETEK E++++ K+RKVYDAFLAEFPLCYGYWKKYADHEAR+G
Sbjct: 159 IVRVNSLDFNAWTALIEETEKVAEDNIL-KIRKVYDAFLAEFPLCYGYWKKYADHEARFG 217
Query: 127 TPEKIVEVYERAVQAVTYSVDIWVHYVTFAMSTYEDPDTIRR 2
+K+VEVYERAVQAVTYSVDIW+HY TFA ST+ DPDTIRR
Sbjct: 218 VIDKVVEVYERAVQAVTYSVDIWLHYCTFATSTFGDPDTIRR 259
>XP_016466924.1 PREDICTED: pre-mRNA-processing factor 39 [Nicotiana tabacum]
Length = 812
Score = 198 bits (504), Expect = 1e-53
Identities = 106/214 (49%), Positives = 137/214 (64%)
Frame = -2
Query: 643 STVPDGNAYANHEAATLEQSGADNNVYGSSDPSSNVETSAVDAATAGYDANSYAGEHAVM 464
S V GN Y +T ++S S D ++ + +A + A YD+++ +
Sbjct: 58 SNVEAGNLYTTDAVSTQQESATAMTYEASQDLAALEDAAAGSSQAAVYDSSANGNNN--- 114
Query: 463 TEQGSVPTDYASADGVQYAASEQTADMNGNGENKEQGQPAYEENPEEERLWSIVRANSAD 284
TE + A + +D++GN N Q + +PEEERLWSIVR NS D
Sbjct: 115 TEARDI------------AENGIASDVHGNS-NMHQPEDGLALSPEEERLWSIVRTNSLD 161
Query: 283 FNAWTALIQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEV 104
FNAWT+LI+ETEK E +++ K+RKVYDAFLAEFPLCYGYWKKYADHE R G+ +K+VEV
Sbjct: 162 FNAWTSLIEETEKMSEGNIL-KIRKVYDAFLAEFPLCYGYWKKYADHETRLGSVDKVVEV 220
Query: 103 YERAVQAVTYSVDIWVHYVTFAMSTYEDPDTIRR 2
YERAVQ VTYSVD+W+HY FA+STY DPDTIRR
Sbjct: 221 YERAVQGVTYSVDMWLHYCVFAISTYGDPDTIRR 254
>XP_015087759.1 PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Solanum
pennellii] XP_015087760.1 PREDICTED: pre-mRNA-processing
factor 39 isoform X1 [Solanum pennellii]
Length = 825
Score = 198 bits (504), Expect = 2e-53
Identities = 108/207 (52%), Positives = 134/207 (64%), Gaps = 11/207 (5%)
Frame = -2
Query: 589 QSGADNNVYGSSDPSSNVETSAVDAATAGYD--------ANSYAGEHAVMTEQGSVPTDY 434
+S A N G++ + V T A YD AN+ AG V + S +
Sbjct: 54 ESAATNVEAGNTYSTDEVSTQQEAATAMAYDVSQDLAALANAPAGSSQVADYESSANGNT 113
Query: 433 ASADGVQYAASEQT---ADMNGNGENKEQGQPAYEENPEEERLWSIVRANSADFNAWTAL 263
A A + A + AD++G+ N Q + +PEEERLWSIVR NS DFNAWTAL
Sbjct: 114 AEARDIAAAGIAENGIAADVHGSS-NMHQPEDGLALSPEEERLWSIVRTNSLDFNAWTAL 172
Query: 262 IQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEVYERAVQA 83
I+ETEK E +++ K+RK YDAFLAEFPLCYGYWKK+ADHEAR G+ +K+VEVYERAVQ
Sbjct: 173 IEETEKMSEGNIL-KIRKAYDAFLAEFPLCYGYWKKFADHEARLGSGDKVVEVYERAVQG 231
Query: 82 VTYSVDIWVHYVTFAMSTYEDPDTIRR 2
VTYSVD+W+HY FA+STY DPDTIRR
Sbjct: 232 VTYSVDMWLHYCVFAISTYGDPDTIRR 258
>XP_004247135.1 PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Solanum
lycopersicum]
Length = 825
Score = 198 bits (504), Expect = 2e-53
Identities = 108/207 (52%), Positives = 134/207 (64%), Gaps = 11/207 (5%)
Frame = -2
Query: 589 QSGADNNVYGSSDPSSNVETSAVDAATAGYD--------ANSYAGEHAVMTEQGSVPTDY 434
+S A N G++ + V T A YD AN+ AG V + S +
Sbjct: 54 ESAATNVEAGNTYSTDEVSTQQEAATAMAYDVSQDLAALANAPAGSSQVADYESSANGNT 113
Query: 433 ASADGVQYAASEQT---ADMNGNGENKEQGQPAYEENPEEERLWSIVRANSADFNAWTAL 263
A A + A + AD++G+ N Q + +PEEERLWSIVR NS DFNAWTAL
Sbjct: 114 AEARDIAAAGIAENGIAADVHGSS-NMHQPEDGLALSPEEERLWSIVRTNSLDFNAWTAL 172
Query: 262 IQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEVYERAVQA 83
I+ETEK E +++ K+RK YDAFLAEFPLCYGYWKK+ADHEAR G+ +K+VEVYERAVQ
Sbjct: 173 IEETEKMSEGNIL-KIRKAYDAFLAEFPLCYGYWKKFADHEARLGSGDKVVEVYERAVQG 231
Query: 82 VTYSVDIWVHYVTFAMSTYEDPDTIRR 2
VTYSVD+W+HY FA+STY DPDTIRR
Sbjct: 232 VTYSVDMWLHYCVFAISTYGDPDTIRR 258
>XP_003521310.1 PREDICTED: pre-mRNA-processing factor 39-like isoform X2 [Glycine
max] KRH67451.1 hypothetical protein GLYMA_03G167000
[Glycine max]
Length = 828
Score = 197 bits (500), Expect = 6e-53
Identities = 105/219 (47%), Positives = 144/219 (65%), Gaps = 5/219 (2%)
Frame = -2
Query: 643 STVPDGNAYANHEAATLEQSGADNNVYGSSDPSSNVETSAVDAATAGYDANSYAGEHAVM 464
S V D N+YA + L+Q A + G S P+ A D+ A S A + ++
Sbjct: 56 SNVGDVNSYAGDPNSILQQ--AQFSATGESKPAGG----AADSNEASAGVGSTAADSTMV 109
Query: 463 TE-----QGSVPTDYASADGVQYAASEQTADMNGNGENKEQGQPAYEENPEEERLWSIVR 299
++ G V + G++ + + AD G+ + K+Q + EE+RLW+IVR
Sbjct: 110 SDYNSSVNGGVAGAVTNTSGLENGNALENAD--GSADEKQQADGYAALSAEEDRLWNIVR 167
Query: 298 ANSADFNAWTALIQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPE 119
ANS DF AWT+LI+ETEK+ E++++ K+R+VYDAFLAEFPLCYGYWKKYADHEAR G+ +
Sbjct: 168 ANSLDFTAWTSLIEETEKAAEDNIL-KIRRVYDAFLAEFPLCYGYWKKYADHEARLGSID 226
Query: 118 KIVEVYERAVQAVTYSVDIWVHYVTFAMSTYEDPDTIRR 2
K+VEVYERAVQ VTYSVD+W+HY FA++TY DPDT+RR
Sbjct: 227 KVVEVYERAVQGVTYSVDMWLHYCIFAITTYGDPDTVRR 265
>KVI03866.1 RNA-processing protein, HAT helix [Cynara cardunculus var.
scolymus]
Length = 637
Score = 194 bits (493), Expect = 6e-53
Identities = 108/239 (45%), Positives = 144/239 (60%), Gaps = 5/239 (2%)
Frame = -2
Query: 703 TGVAQPMDFSVAQDSQLKDVSTVPDGNAYANHEAATLEQSGADNNVYGSSDPSSNVETSA 524
TGVA D S D V + ++A+ D N + PSS + +
Sbjct: 38 TGVATSSDTIDVAASTGNDPMVVDNAISHADDPGTVGRSEVVDVN-FSHEAPSSTTQDVS 96
Query: 523 VDAATAGYDANSYAGEHAVM-----TEQGSVPTDYASADGVQYAASEQTADMNGNGENKE 359
+ A D+++ H+ + ++ ++P+ S +GV S A + + E
Sbjct: 97 ENPANVSVDSSNATAYHSSVNGNDVSDAKTLPSVGVSENGV----SSYDAHNSASASQPE 152
Query: 358 QGQPAYEENPEEERLWSIVRANSADFNAWTALIQETEKSPEEHLIPKVRKVYDAFLAEFP 179
G +PEEERLWSIV ANS DF+AWTALI+ETEK+ EE+++ K+RKVYD FLAEFP
Sbjct: 153 DGSVVAALSPEEERLWSIVNANSLDFSAWTALIEETEKTAEENVL-KIRKVYDGFLAEFP 211
Query: 178 LCYGYWKKYADHEARYGTPEKIVEVYERAVQAVTYSVDIWVHYVTFAMSTYEDPDTIRR 2
LCYGYWKKYADHEAR G +K+VEVYERAV VTYSVD+W+HY FA++TY DPDT+RR
Sbjct: 212 LCYGYWKKYADHEARLGFLDKVVEVYERAVHGVTYSVDMWLHYGVFAINTYGDPDTVRR 270
>KHN10777.1 Pre-mRNA-processing factor 39 [Glycine soja]
Length = 850
Score = 197 bits (500), Expect = 7e-53
Identities = 105/219 (47%), Positives = 144/219 (65%), Gaps = 5/219 (2%)
Frame = -2
Query: 643 STVPDGNAYANHEAATLEQSGADNNVYGSSDPSSNVETSAVDAATAGYDANSYAGEHAVM 464
S V D N+YA + L+Q A + G S P+ A D+ A S A + ++
Sbjct: 56 SNVGDVNSYAGDPNSILQQ--AQFSATGESKPAGG----AADSNEASAGVGSTAADSTMV 109
Query: 463 TEQGSVPTD-----YASADGVQYAASEQTADMNGNGENKEQGQPAYEENPEEERLWSIVR 299
++ S D + G++ + + AD G+ + K+Q + EE+RLW+IVR
Sbjct: 110 SDYNSSVNDGVAGAVTNTSGLENGNALENAD--GSADEKQQADGYAALSAEEDRLWNIVR 167
Query: 298 ANSADFNAWTALIQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPE 119
ANS DF AWT+LI+ETEK+ E++++ K+R+VYDAFLAEFPLCYGYWKKYADHEAR G+ +
Sbjct: 168 ANSLDFTAWTSLIEETEKAAEDNIL-KIRRVYDAFLAEFPLCYGYWKKYADHEARLGSID 226
Query: 118 KIVEVYERAVQAVTYSVDIWVHYVTFAMSTYEDPDTIRR 2
K+VEVYERAVQ VTYSVD+W+HY FA++TY DPDT+RR
Sbjct: 227 KVVEVYERAVQGVTYSVDMWLHYCIFAITTYGDPDTVRR 265
>XP_010326347.1 PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Solanum
lycopersicum] XP_010326348.1 PREDICTED:
pre-mRNA-processing factor 39 isoform X1 [Solanum
lycopersicum]
Length = 826
Score = 196 bits (499), Expect = 8e-53
Identities = 106/207 (51%), Positives = 132/207 (63%), Gaps = 11/207 (5%)
Frame = -2
Query: 589 QSGADNNVYGSSDPSSNVETSAVDAATAGYD--------ANSYAGEHAVMTEQGSVPTDY 434
+S A N G++ + V T A YD AN+ AG V + S +
Sbjct: 54 ESAATNVEAGNTYSTDEVSTQQEAATAMAYDVSQDLAALANAPAGSSQVADYESSANGNT 113
Query: 433 ASADGVQYAASEQT---ADMNGNGENKEQGQPAYEENPEEERLWSIVRANSADFNAWTAL 263
A A + A + AD++G+ + +PEEERLWSIVR NS DFNAWTAL
Sbjct: 114 AEARDIAAAGIAENGIAADVHGSSNMHQPEDGLAALSPEEERLWSIVRTNSLDFNAWTAL 173
Query: 262 IQETEKSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEVYERAVQA 83
I+ETEK E +++ K+RK YDAFLAEFPLCYGYWKK+ADHEAR G+ +K+VEVYERAVQ
Sbjct: 174 IEETEKMSEGNIL-KIRKAYDAFLAEFPLCYGYWKKFADHEARLGSGDKVVEVYERAVQG 232
Query: 82 VTYSVDIWVHYVTFAMSTYEDPDTIRR 2
VTYSVD+W+HY FA+STY DPDTIRR
Sbjct: 233 VTYSVDMWLHYCVFAISTYGDPDTIRR 259
>XP_018807878.1 PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Juglans
regia]
Length = 790
Score = 195 bits (496), Expect = 1e-52
Identities = 116/250 (46%), Positives = 153/250 (61%), Gaps = 3/250 (1%)
Frame = -2
Query: 742 GAQAVDYNAVDNATGVAQPMDFSVAQDSQLKDVS---TVPDGNAYANHEAATLEQSGADN 572
GA + V +A+ + ++ S L D + T PD N H T E + A
Sbjct: 34 GASPSEATGVFSASTAPADISSAIRGGSDLGDGNVHGTDPDPNIQEAHVITTSEANLAAE 93
Query: 571 NVYGSSDPSSNVETSAVDAATAGYDANSYAGEHAVMTEQGSVPTDYASADGVQYAASEQT 392
V +S+ +++E +A + + AG + +S G + E G V +D V +A EQ
Sbjct: 94 -VANTSEKVTDLENAATEFSQAGGNISSLNGTDGIRVENGHV------SDHVGRSADEQQ 146
Query: 391 ADMNGNGENKEQGQPAYEENPEEERLWSIVRANSADFNAWTALIQETEKSPEEHLIPKVR 212
D PA + EE+RLW+IVRAN+ DFNAWT+LI+ETEK +E+++ K+R
Sbjct: 147 FD---------GFVPAV--SAEEDRLWNIVRANALDFNAWTSLIEETEKVAQENIL-KIR 194
Query: 211 KVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEVYERAVQAVTYSVDIWVHYVTFAMS 32
K YDAFLAEFPLCYGYWKKYADHEA G+ EK+VEVYERAVQ VTYSVDIW+HY FA+S
Sbjct: 195 KAYDAFLAEFPLCYGYWKKYADHEAHLGSVEKVVEVYERAVQGVTYSVDIWLHYCIFAIS 254
Query: 31 TYEDPDTIRR 2
TY DP+TIRR
Sbjct: 255 TYGDPETIRR 264
>XP_015901157.1 PREDICTED: pre-mRNA-processing factor 39 isoform X4 [Ziziphus
jujuba]
Length = 840
Score = 196 bits (497), Expect = 2e-52
Identities = 115/262 (43%), Positives = 153/262 (58%), Gaps = 9/262 (3%)
Frame = -2
Query: 760 NQSVVEGAQAVDYNAVDNATGVAQPMDFSVAQDSQLKDVSTVPDGNAYANHEAATLEQS- 584
N ++ A A+ A + A P D S D S++ DGN+Y +++S
Sbjct: 31 NPNIPHNAGALPSEASGEISTSAAPADVS----HSAPDSSSLGDGNSYTVDSITVMQESH 86
Query: 583 -GADNNV---YGSSDPSSNV---ETSAVDAA-TAGYDANSYAGEHAVMTEQGSVPTDYAS 428
G+ N + + D S NV E A++++ AGY GS A
Sbjct: 87 VGSGNEMKTAVAAIDSSGNVAAVENEAINSSQAAGY---------------GSSVNGVAG 131
Query: 427 ADGVQYAASEQTADMNGNGENKEQGQPAYEENPEEERLWSIVRANSADFNAWTALIQETE 248
A V + +D G +++Q + EEERLW+IVR NS DFN+WTALI+ETE
Sbjct: 132 AGTVMSVDNGDASDRVGGAVHEQQYVDGSAMSAEEERLWNIVRTNSLDFNSWTALIEETE 191
Query: 247 KSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEVYERAVQAVTYSV 68
K E +++ K+RKVYDAFLAEFPLCYGYWKKYADHEA G+ +K+VEVYERA+Q VTYSV
Sbjct: 192 KVAENNIL-KIRKVYDAFLAEFPLCYGYWKKYADHEANLGSVDKVVEVYERAIQGVTYSV 250
Query: 67 DIWVHYVTFAMSTYEDPDTIRR 2
+IW+HY FA+STY DPDT+RR
Sbjct: 251 EIWLHYCMFAISTYGDPDTVRR 272
>XP_015901156.1 PREDICTED: pre-mRNA-processing factor 39 isoform X3 [Ziziphus
jujuba]
Length = 841
Score = 196 bits (497), Expect = 2e-52
Identities = 115/262 (43%), Positives = 153/262 (58%), Gaps = 9/262 (3%)
Frame = -2
Query: 760 NQSVVEGAQAVDYNAVDNATGVAQPMDFSVAQDSQLKDVSTVPDGNAYANHEAATLEQS- 584
N ++ A A+ A + A P D S D S++ DGN+Y +++S
Sbjct: 31 NPNIPHNAGALPSEASGEISTSAAPADVS----HSAPDSSSLGDGNSYTVDSITVMQESH 86
Query: 583 -GADNNV---YGSSDPSSNV---ETSAVDAA-TAGYDANSYAGEHAVMTEQGSVPTDYAS 428
G+ N + + D S NV E A++++ AGY GS A
Sbjct: 87 VGSGNEMKTAVAAIDSSGNVAAVENEAINSSQAAGY---------------GSSVNGVAG 131
Query: 427 ADGVQYAASEQTADMNGNGENKEQGQPAYEENPEEERLWSIVRANSADFNAWTALIQETE 248
A V + +D G +++Q + EEERLW+IVR NS DFN+WTALI+ETE
Sbjct: 132 AGTVMSVDNGDASDRVGGAVHEQQYVDGSAMSAEEERLWNIVRTNSLDFNSWTALIEETE 191
Query: 247 KSPEEHLIPKVRKVYDAFLAEFPLCYGYWKKYADHEARYGTPEKIVEVYERAVQAVTYSV 68
K E +++ K+RKVYDAFLAEFPLCYGYWKKYADHEA G+ +K+VEVYERA+Q VTYSV
Sbjct: 192 KVAENNIL-KIRKVYDAFLAEFPLCYGYWKKYADHEANLGSVDKVVEVYERAIQGVTYSV 250
Query: 67 DIWVHYVTFAMSTYEDPDTIRR 2
+IW+HY FA+STY DPDT+RR
Sbjct: 251 EIWLHYCMFAISTYGDPDTVRR 272