BLASTX nr result
ID: Ephedra29_contig00011191
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00011191
(1369 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006843179.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 434 e-146
XP_010263262.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 419 e-140
JAT66508.1 RNA pseudourine synthase 3, mitochondrial [Anthurium ... 415 e-138
XP_008807168.2 PREDICTED: LOW QUALITY PROTEIN: RNA pseudouridine... 413 e-137
OMO76072.1 Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corchorus ... 412 e-137
XP_003572398.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 412 e-137
XP_011074171.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 411 e-137
XP_015650456.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 411 e-137
XP_010927194.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 411 e-137
EAZ43360.1 hypothetical protein OsJ_27960 [Oryza sativa Japonica... 411 e-136
XP_019249221.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 410 e-136
XP_019054042.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 405 e-136
XP_002267010.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 409 e-136
XP_015650455.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 405 e-136
XP_006659607.2 PREDICTED: RNA pseudouridine synthase 3, mitochon... 406 e-136
XP_004974856.2 PREDICTED: RNA pseudouridine synthase 3, mitochon... 407 e-136
XP_009620200.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 408 e-136
XP_016433864.1 PREDICTED: RNA pseudouridine synthase 3, mitochon... 407 e-135
KQL02517.1 hypothetical protein SETIT_013670mg [Setaria italica] 407 e-135
BAT06289.1 Os08g0520100, partial [Oryza sativa Japonica Group] 402 e-135
>XP_006843179.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Amborella
trichopoda] ERN04854.1 hypothetical protein
AMTR_s00146p00072100 [Amborella trichopoda]
Length = 462
Score = 434 bits (1115), Expect = e-146
Identities = 226/409 (55%), Positives = 290/409 (70%), Gaps = 16/409 (3%)
Frame = +3
Query: 168 PLAAKTYRST-ITAFKWVFYWCPDLPLPTIYNLFQTFQVLVETEESRSSGAAR------- 323
PL K + +TA W+ ++ ++ IY FQ QVL E E +
Sbjct: 56 PLPGKNNEAARVTAIIWLKHYFAEIDSLVIYRHFQRGQVLRECLEDGDPSEGKHHCMFIH 115
Query: 324 --KPVGDRDVLSSGCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDR 497
K VG +V+ +G +Y+PVSI KI KRY+ +P GT+HPNADEI Y+R LV+YKD
Sbjct: 116 PLKKVGANEVMKNGLQIYVPVSICESKI-SKRYDTIPSGTLHPNADEIDYLRRLVMYKDS 174
Query: 498 AIIVLNRPTHLPAQASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQE 677
AIIVLN+P LP + +L +HNSMDALAAA LS+ Y+EGPK+VHR+DRESSGI++MGRT E
Sbjct: 175 AIIVLNKPPKLPVKGNLPVHNSMDALAAAALSFGYDEGPKLVHRLDRESSGIILMGRTDE 234
Query: 678 SIQCLHDLFREKNIMPSENKNSVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKP 857
S + L LF + + R + ++YWALVIG PKEK+G+ISAPLSKV L++
Sbjct: 235 SFKRLRSLFNYGSNGLTSESTGDRCKGAIRKYWALVIGSPKEKQGLISAPLSKVLLNDGK 294
Query: 858 KERVIIS-RSELDGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIV 1034
ER+I++ S LDG QEA+T YRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIV
Sbjct: 295 TERLILAYNSSLDGAQEAITEYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIV 354
Query: 1035 GDYKYGWYIHKRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAI 1214
GDYKYGWY+HK W+Q+ + D DP+TG+ + ++ H +L V +G+VL+KVPLLHLHCREL I
Sbjct: 355 GDYKYGWYVHKCWKQMPRADFDPETGKPYKMRRHHNLAVQKGSVLSKVPLLHLHCRELVI 414
Query: 1215 PNVAKKLGLI-DSN----CESAYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
PN+ K D+N C+S K++ LRFVAP+P+HM +SWNVM+SCL
Sbjct: 415 PNIEKYFEKSQDANKPMKCKS--KQDVLRFVAPMPSHMKISWNVMSSCL 461
>XP_010263262.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
[Nelumbo nucifera]
Length = 474
Score = 419 bits (1076), Expect = e-140
Identities = 217/425 (51%), Positives = 297/425 (69%), Gaps = 14/425 (3%)
Frame = +3
Query: 114 QYFALPRVP-HSHYSETTTPLAAKTYRSTITAFKWVFYWCPDLPLPTIYNLFQTFQVLVE 290
Q +LP P H +++ +A ++ + +TA WV Y+ D+P P I + F V +
Sbjct: 52 QLLSLPPFPGHPLPGKSSVSVAGQS--AHVTAISWVKYYFDDIPGPVIQSHFNKGLVKMA 109
Query: 291 TE-------ESRSSGAARKPVGDRDVLSSGCTVYLPVSIYYRKIWKKRYEPLPRGTMHPN 449
E + + K + +V+ G +Y+PVS+ KI KR++ +P GT++PN
Sbjct: 110 CPNPGDLLMEEQGQMQSLKKISPNEVMEVGSRIYVPVSVIETKI-SKRFDTIPSGTLYPN 168
Query: 450 ADEIRYIRSLVLYKDRAIIVLNRPTHLPAQASLGIHNSMDALAAATLSYEYEEGPKVVHR 629
ADEI Y++ LV+YKD AIIVLN+P LP + +L +HNSMDALA A LSY YE+GPK+VHR
Sbjct: 169 ADEIEYLQRLVMYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAEAALSYGYEQGPKLVHR 228
Query: 630 IDRESSGILVMGRTQESIQCLHDLFREKNIMPSENKN-SVRDEIFEQRYWALVIGCPKEK 806
+DRESSG+L+MGRT+ESI LH LF + N S K + E QRYWALVIG P+EK
Sbjct: 229 LDRESSGLLLMGRTKESIARLHWLFSDVNKAKSPLKTWNDACETTTQRYWALVIGSPREK 288
Query: 807 EGVISAPLSKVALDEKPKERVIISR-SELDGPQEAVTRYRVLGPTINGCSWIELCPLTGR 983
+G I APLSKV L++ ERVI++ S ++ QEA+T +RVLGP INGC+WIELCPLTGR
Sbjct: 289 QGRICAPLSKVLLNDGKTERVILANPSGVEASQEAITDFRVLGPMINGCTWIELCPLTGR 348
Query: 984 KHQLRVHCAEALGTPIVGDYKYGWYIHKRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGT 1163
KHQLRVHCAEALGTPIVGDYKYGWY+HK+W+Q+ + D++P TG+ + L+ L+V +G+
Sbjct: 349 KHQLRVHCAEALGTPIVGDYKYGWYVHKKWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGS 408
Query: 1164 VLAKVPLLHLHCRELAIPNVAKKLGLIDSNCES----AYKKNTLRFVAPLPTHMAMSWNV 1331
VL+KVPLLHLHCREL +PN+AK L ++D ++ + + + LRFVAP+P+HM +SWN+
Sbjct: 409 VLSKVPLLHLHCRELILPNIAKFLDILDRKSQNLPKFSSRPDVLRFVAPMPSHMKISWNL 468
Query: 1332 MASCL 1346
M+S L
Sbjct: 469 MSSYL 473
>JAT66508.1 RNA pseudourine synthase 3, mitochondrial [Anthurium amnicola]
Length = 490
Score = 415 bits (1067), Expect = e-138
Identities = 225/427 (52%), Positives = 285/427 (66%), Gaps = 16/427 (3%)
Frame = +3
Query: 114 QYFALPRVPHSHYSETTTPLAAKTYRSTITAFKWVFYWCPDLPLPTIYNLFQT--FQVLV 287
Q ALP P +T S +TA W+ + D+P P I + F QV+
Sbjct: 65 QLLALPPFPAPCSPNPLPGRKTRTPGSRVTAVTWLKHCFADVPSPVIQSHFNKGLVQVVC 124
Query: 288 ETEESRSSGA-----ARKPVGDRDVLSSGCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNA 452
E+ G + + V + + G +Y+PVS+ KI KRY+ +P T+HPNA
Sbjct: 125 SNHEAPLIGKQHAMLSMRKVKHNETMEPGMQLYVPVSVAETKI-AKRYDTIPTATLHPNA 183
Query: 453 DEIRYIRSLVLYKDRAIIVLNRPTHLPAQASLGIHNSMDALAAATLSYEYEEGPKVVHRI 632
DEI Y++ LV+YKD AIIVLN+P +P + +L +HNSMDALAAA LSY EEGPK+VHR+
Sbjct: 184 DEIEYLQRLVVYKDCAIIVLNKPPKVPVKGNLPVHNSMDALAAAALSYGNEEGPKLVHRL 243
Query: 633 DRESSGILVMGRTQESIQCLHDLFREKNIMPSENK--NSVRDEIFEQRYWALVIGCPKEK 806
D ESSG+L+MGRT+ES LH LF N+ S ++ NS E QRYWALVIGCPKEK
Sbjct: 244 DVESSGLLLMGRTKESTTWLHWLFSSINLAKSSSEIWNSAC-EATVQRYWALVIGCPKEK 302
Query: 807 EGVISAPLSKVALDEKPKERVIISR-SELDGPQEAVTRYRVLGPTINGCSWIELCPLTGR 983
EG+I APLSKV L++ ERV+++ S +DG QEA+T YRVLGPTI GCSW+EL P+TGR
Sbjct: 303 EGLICAPLSKVILNDGKTERVVLAHPSGIDGSQEAITEYRVLGPTIKGCSWVELRPVTGR 362
Query: 984 KHQLRVHCAEALGTPIVGDYKYGWYIHKRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGT 1163
KHQLRVHCAEALGTPIVGDYKYGWY+H+RW+Q D +P TG + L+ L V +G+
Sbjct: 363 KHQLRVHCAEALGTPIVGDYKYGWYVHQRWKQTPSADHEPITGEPYRLRRPEGLAVQKGS 422
Query: 1164 VLAKVPLLHLHCRELAIPNVAKKLGLIDSNCE------SAYKKNTLRFVAPLPTHMAMSW 1325
VL+KVPLLHLHCRE+ IPNVAK L DS SA K + LRFVAP+P+HM +SW
Sbjct: 423 VLSKVPLLHLHCREMVIPNVAKLLAKSDSKFHDEQSLISARKSDLLRFVAPMPSHMQISW 482
Query: 1326 NVMASCL 1346
N+M+S L
Sbjct: 483 NIMSSFL 489
>XP_008807168.2 PREDICTED: LOW QUALITY PROTEIN: RNA pseudouridine synthase 3,
mitochondrial [Phoenix dactylifera]
Length = 482
Score = 413 bits (1061), Expect = e-137
Identities = 219/407 (53%), Positives = 281/407 (69%), Gaps = 14/407 (3%)
Frame = +3
Query: 168 PLAAKTYRSTITAFKWVFYWCPDLPLPTIYNLFQTFQVLVET-------EESRSSGAARK 326
P A + ITA WV ++ D+P I + F+ V VE+ E+ K
Sbjct: 76 PAADPSKPRRITAITWVKHYFADIPPEVIQSHFRKGLVHVESSNRGVPLEKGHHQMHQLK 135
Query: 327 PVGDRDVLSSGCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAII 506
V DV+ G +++PVS+ KI KRY+ +P T+HPNADEI YIR LV YKD AII
Sbjct: 136 RVKHNDVMEVGMKIHIPVSVAETKI-TKRYDTIPTATLHPNADEIEYIRRLVTYKDSAII 194
Query: 507 VLNRPTHLPAQASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQ 686
VLN+P +P + +L +HNSMD LAAA LSY E+GPK+VHR+DRESSG+L+MGRT+ES
Sbjct: 195 VLNKPPKVPVKGNLPVHNSMDVLAAAALSYGNEQGPKLVHRLDRESSGLLLMGRTKESFA 254
Query: 687 CLHDLFREKNIMPSENKN-SVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPKE 863
LH LF N+ S ++ + E QRYWALVIGCPKE+EG+ISAPLSKV L++ E
Sbjct: 255 QLHWLFTNINLAKSSSQTWNDACEATMQRYWALVIGCPKEREGLISAPLSKVLLNDGKTE 314
Query: 864 RVIISR-SELDGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGD 1040
RVI++ S +DG QEAVT YRV+GPTINGCSW+EL PLTGRKHQLRVHCAEALGTPIVGD
Sbjct: 315 RVILAHPSGIDGSQEAVTEYRVMGPTINGCSWVELRPLTGRKHQLRVHCAEALGTPIVGD 374
Query: 1041 YKYGWYIHKRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPN 1220
YKYGW++H+RW+Q+ + D +P T + L+ L V +G+ L+KVPLLHLHCRE+ IP+
Sbjct: 375 YKYGWFMHQRWKQMPRVDYEPMTRAPYKLRRPEGLEVQKGSALSKVPLLHLHCREMVIPH 434
Query: 1221 VAKKLGLI-----DSNCESAYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
+AK L + S+ K + LRFVAP+P+HM +SWNVM+SCL
Sbjct: 435 IAKFLSSSGEWHDEGTPWSSDKPDLLRFVAPMPSHMKISWNVMSSCL 481
>OMO76072.1 Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corchorus capsularis]
Length = 470
Score = 412 bits (1058), Expect = e-137
Identities = 216/409 (52%), Positives = 290/409 (70%), Gaps = 16/409 (3%)
Frame = +3
Query: 168 PLAAKTYRST-ITAFKWVFYWCPDLPLPTIYNLFQTFQVLVETEESRSSGAAR------- 323
PL K +T +TA W+ Y+ ++ I + F V VE+ + +S R
Sbjct: 63 PLPGKDSGTTRVTAISWLKYYFDEISDSAIQSHFNKGLVQVESSNADNSFIGRNGQMKQL 122
Query: 324 KPVGDRDVLSSGCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAI 503
+ + +V+ G +++PVSI +I KR++ +P GT++PNADEI Y+R LV YKD AI
Sbjct: 123 RKIKHNEVMQVGARIWVPVSIAETRI-SKRFDCIPSGTLNPNADEINYLRRLVKYKDYAI 181
Query: 504 IVLNRPTHLPAQASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESI 683
+VLN+P LP + SL +HNSMDALAAA LSY+ +EGPK+VHR+DRESSG+++MGRT+ESI
Sbjct: 182 LVLNKPAKLPVKGSLPVHNSMDALAAAALSYDNDEGPKLVHRLDRESSGLILMGRTKESI 241
Query: 684 QCLHDLFREKNIMPSENK--NSVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKP 857
LH LF + N S K N D F QRYWALVIG PKE EG+ISAPLSK+ LD+
Sbjct: 242 AHLHFLFSDINTARSSCKAWNDACDAKF-QRYWALVIGTPKENEGLISAPLSKILLDDGK 300
Query: 858 KERVIISRSE-LDGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIV 1034
ERVI++++ L+ QEA+T YRVLGP INGCSWIEL PLT RKHQLRVHCAEALGTPIV
Sbjct: 301 TERVILAQNVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGTPIV 360
Query: 1035 GDYKYGWYIHKRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAI 1214
GDYKYGW++HK+W+Q+ + D++P TG+ + L+ L+V +G+VL+KVPLLHLHCREL +
Sbjct: 361 GDYKYGWFVHKKWKQMARVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVL 420
Query: 1215 PNVAKKLGLIDSNCES-----AYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
PN+AK L ++++N E+ + K + LRFVA +P HM +SWN+M+S L
Sbjct: 421 PNIAKFLPMLNNNTETLPPTVSSKLDLLRFVAAMPNHMKISWNLMSSYL 469
>XP_003572398.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Brachypodium
distachyon] KQJ99001.1 hypothetical protein BRADI_3g40480
[Brachypodium distachyon]
Length = 479
Score = 412 bits (1058), Expect = e-137
Identities = 218/426 (51%), Positives = 280/426 (65%), Gaps = 15/426 (3%)
Frame = +3
Query: 114 QYFALPRVPHSHYSETTTPLAAKTYRSTITAFKWVFYWCPDLPLPTIYNLFQTFQVLVET 293
Q +LP P AA ++A WV + D+P + F QV E
Sbjct: 55 QLLSLPPFPAGADPLPGRKTAAAEASRRVSAVSWVKHCFADVPQEVVQAHFNKRQVFAEC 114
Query: 294 EESRSSGAA-------RKPVGDRDVLSSGCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNA 452
+ S + K + +V+ G ++LPVS+ +I KKRYE +P T+HPN
Sbjct: 115 SDQEVSAVSIRSQEHHLKKIKHSEVMEPGMRIHLPVSVAEAEI-KKRYETIPAATLHPNK 173
Query: 453 DEIRYIRSLVLYKDRAIIVLNRPTHLPAQASLGIHNSMDALAAATLSYEYEEGPKVVHRI 632
DEI Y++ LV+YKD AI+VLN+P +P + L +HNSMD LAAA LSY E+GPK+VHR+
Sbjct: 174 DEIEYLKRLVIYKDSAILVLNKPPKVPMKGHLPVHNSMDVLAAAALSYGNEDGPKLVHRL 233
Query: 633 DRESSGILVMGRTQESIQCLHDLFREKNIMPSENK--NSVRDEIFEQRYWALVIGCPKEK 806
DR++SG+L+MGRT+ES LH LF + + + NS E + QRYWALVIG PKE
Sbjct: 234 DRDTSGLLLMGRTKESFTRLHWLFTSVKLARTASPIWNSAC-ESYLQRYWALVIGTPKES 292
Query: 807 EGVISAPLSKVALDEKPKERVIISR-SELDGPQEAVTRYRVLGPTINGCSWIELCPLTGR 983
EGVISAPL+KV LD+ ERVI++ S +DG QEAVT YRV+GPTINGCSWIELCPLTGR
Sbjct: 293 EGVISAPLTKVLLDDGKAERVILAHPSGIDGAQEAVTEYRVMGPTINGCSWIELCPLTGR 352
Query: 984 KHQLRVHCAEALGTPIVGDYKYGWYIHKRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGT 1163
KHQLRVHCAEALGTPIVGDYKYGW++H+RW+Q Q D +P TG ++ L+ L V +G+
Sbjct: 353 KHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGEQYKLRRPEGLEVQKGS 412
Query: 1164 VLAKVPLLHLHCRELAIPNVAKKLGLI-----DSNCESAYKKNTLRFVAPLPTHMAMSWN 1328
VL+KVPLLHLHCRE+ +PN+AK L D S K N LRF+AP+P HM +SWN
Sbjct: 413 VLSKVPLLHLHCREMVVPNIAKFLSNTGDWHDDGTPWSKEKPNLLRFIAPMPAHMKISWN 472
Query: 1329 VMASCL 1346
+M+S L
Sbjct: 473 IMSSYL 478
>XP_011074171.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Sesamum
indicum]
Length = 475
Score = 411 bits (1057), Expect = e-137
Identities = 224/446 (50%), Positives = 298/446 (66%), Gaps = 19/446 (4%)
Frame = +3
Query: 66 TNHEYHSQMRRKRVAP-QYFALPRVP-HSHYSETTTPLAAKTYRSTITAFKWVFYWCPDL 239
TN+ H ++ P Q +LP P HS P T +TA W+ Y+ D+
Sbjct: 37 TNNIAHLGRPKEGPKPRQLLSLPPFPGHS------LPGRKSTSAEHVTAISWLKYYFDDI 90
Query: 240 PLPTIYNLFQTFQVLVETEESRSSGAARKPVGDR-------DVLSSGCTVYLPVSIYYRK 398
P P I + F V +E+ +SR + D DV+ G VY+PVS+ K
Sbjct: 91 PPPLIQSHFNKGLVQMESLDSRGPSGCHQGQTDSMRKLKHSDVMEVGARVYVPVSVAECK 150
Query: 399 IWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHLPAQASLGIHNSMDALA 578
I KR++ +P GT++PNADEI Y+R LV YKD AI+VLN+P LP + +L +HNSMDALA
Sbjct: 151 I-SKRFDVIPSGTLYPNADEIEYLRRLVKYKDSAILVLNKPPKLPVKGNLSVHNSMDALA 209
Query: 579 AATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQCLHDLFRE--KNIMPSENKNSVRD 752
AA L+Y+Y+EGPK+VHR+DRESSG+L+MGR++ESI L LF + K SE+ N +
Sbjct: 210 AAALTYDYDEGPKLVHRLDRESSGLLLMGRSRESISYLQWLFNDGRKAESLSEDWNDACE 269
Query: 753 EIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPKERVIISRSE-LDGPQEAVTRYRVL 929
++ QRYWALVIG PK+KEG+I PL+KV L++ ERV+++ + L+ QEA+T YRVL
Sbjct: 270 AMY-QRYWALVIGLPKQKEGLICTPLTKVLLNDGKTERVVLAHNSCLEAAQEAITEYRVL 328
Query: 930 GPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIHKRWQQIRQRDVDPDT 1109
GPTINGCSWIEL P T RKHQLRVHCAEALGTPIVGDYKYGW++HKRW+Q+ + D +P T
Sbjct: 329 GPTINGCSWIELRPHTRRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPRVDFEPTT 388
Query: 1110 GRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPNVAK-------KLGLIDSNCESAY 1268
G + L+ L+V +G+VL+KVPLLHLHCRE+ +PN+AK +LG N E
Sbjct: 389 GEPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFIVLHKQQLGGYRVNPEHDL 448
Query: 1269 KKNTLRFVAPLPTHMAMSWNVMASCL 1346
K + LRFVAP+P+HM +SWN+M+S L
Sbjct: 449 KPDVLRFVAPMPSHMKISWNLMSSYL 474
>XP_015650456.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X2
[Oryza sativa Japonica Group] Q0J4D4.1 RecName: Full=RNA
pseudouridine synthase 3, mitochondrial; AltName:
Full=RNA pseudouridylate synthase 3; AltName:
Full=RNA-uridine isomerase 3; Flags: Precursor BAF24179.1
Os08g0520100 [Oryza sativa Japonica Group] EAZ07658.1
hypothetical protein OsI_29911 [Oryza sativa Indica
Group] BAT06288.1 Os08g0520100 [Oryza sativa Japonica
Group]
Length = 475
Score = 411 bits (1057), Expect = e-137
Identities = 215/402 (53%), Positives = 279/402 (69%), Gaps = 19/402 (4%)
Frame = +3
Query: 198 ITAFKWVFYWCPDLPLPTI---------YNLFQTFQVLVETEESRSSGAARKPVGDRDVL 350
+TA WV ++ D+P + Y+ +V VET +S+ K + DV+
Sbjct: 79 VTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSVETIKSQKHHL--KKIKHNDVM 136
Query: 351 SSGCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHL 530
G ++LPVS+ +I KKRYE +P T+HPN DEI Y+R LV++KD AI+VLN+P +
Sbjct: 137 EPGMRIHLPVSVAEGEI-KKRYETIPTATLHPNKDEIEYLRRLVIHKDSAILVLNKPPKV 195
Query: 531 PAQASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQCLHDLFRE 710
P + +L +HNSMD LAAA LSY EEGPK+VHR+DRESSG+L+ GRT+ES LH LF
Sbjct: 196 PMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFGRTKESFTRLHWLFTS 255
Query: 711 KNIMPSENKN-SVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPKERVIISR-S 884
N+ + ++ + E + QRYWALVIG PKE+EG+ISAPLSKV LD+ ERVI++ S
Sbjct: 256 VNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGKAERVILAHPS 315
Query: 885 ELDGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIH 1064
+DG QEAVT YRV+GPTI+GCSWIEL PLTGRKHQLRVHCAEALGTPIVGDYKYGW++H
Sbjct: 316 GIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVH 375
Query: 1065 KRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPNVAKKLGLI 1244
+RW+Q Q D +P TG + L+ L + +G+VL+KVPLLHLHCRE+ IPN+AK +
Sbjct: 376 QRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAK---FL 432
Query: 1245 DSNCE--------SAYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
SN E S K N LRF+AP+P HM +SWN+M+S L
Sbjct: 433 SSNGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMSSYL 474
>XP_010927194.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Elaeis
guineensis]
Length = 483
Score = 411 bits (1056), Expect = e-137
Identities = 223/429 (51%), Positives = 289/429 (67%), Gaps = 18/429 (4%)
Frame = +3
Query: 114 QYFALPRVPHSHYS----ETTTPLAAKTYRSTITAFKWVFYWCPDLPLPTIYNLFQTFQV 281
Q +LP P SH + P A + ITA WV ++ D+P I + F+ V
Sbjct: 55 QLLSLPPFPSSHTNPLPGRKRDPAADPSKPRRITAITWVKHYFADIPPEVIQSHFRKGLV 114
Query: 282 LVET-------EESRSSGAARKPVGDRDVLSSGCTVYLPVSIYYRKIWKKRYEPLPRGTM 440
VE+ ++ K V DV+ G +++PVS+ KI KRY+ +P T+
Sbjct: 115 HVESSNHGVPPDKGDHQMCQLKRVKHNDVMEVGMKIHIPVSVAETKI-TKRYDTIPTATL 173
Query: 441 HPNADEIRYIRSLVLYKDRAIIVLNRPTHLPAQASLGIHNSMDALAAATLSYEYEEGPKV 620
HPNADEI YIR LV+YKD AIIVLN+P +P + +L +HNSMD LAAA LSY E+GPK+
Sbjct: 174 HPNADEIEYIRRLVIYKDSAIIVLNKPPKVPVKGNLPVHNSMDVLAAAALSYGNEQGPKL 233
Query: 621 VHRIDRESSGILVMGRTQESIQCLHDLFREKNIMPSENKN-SVRDEIFEQRYWALVIGCP 797
VHR+DRESSG+L+MGRT+E+ LH LF N+ S ++ + E QRYWALVIGCP
Sbjct: 234 VHRLDRESSGLLLMGRTKETFARLHWLFANINLAKSSSQIWNDACEATMQRYWALVIGCP 293
Query: 798 KEKEGVISAPLSKVALDEKPKERVIISR-SELDGPQEAVTRYRVLGPTINGCSWIELCPL 974
KE+EG+ISAPLSKV LD+ ERVI++ S +DG QEAVT YRV+GPTINGCSW+EL PL
Sbjct: 294 KEREGLISAPLSKVLLDDGKTERVILAHPSGIDGSQEAVTEYRVMGPTINGCSWVELRPL 353
Query: 975 TGRKHQLRVHCAEALGTPIVGDYKYGWYIHKRWQQIRQRDVDPDTGRRFLLKLHPHLNVN 1154
TGRKHQLRVHCAEALGTPIVGDYKYGW++H+RW+Q+ + D +P T + L+ L V
Sbjct: 354 TGRKHQLRVHCAEALGTPIVGDYKYGWFMHQRWKQMPRVDYEPMTRSPYKLRRPEGLEVQ 413
Query: 1155 RGTVLAKVPLLHLHCRELAIPNVAKKLGLI-----DSNCESAYKKNTLRFVAPLPTHMAM 1319
+G+VL+KVPLLHLHCRE+ IP+ AK L + ++ K + LRFVAP+P+HM +
Sbjct: 414 KGSVLSKVPLLHLHCREMVIPHFAKFLRSSGEWHDEGTPWTSDKPDLLRFVAPMPSHMKI 473
Query: 1320 SWNVMASCL 1346
SWNVM+S L
Sbjct: 474 SWNVMSSYL 482
>EAZ43360.1 hypothetical protein OsJ_27960 [Oryza sativa Japonica Group]
Length = 509
Score = 411 bits (1057), Expect = e-136
Identities = 215/402 (53%), Positives = 279/402 (69%), Gaps = 19/402 (4%)
Frame = +3
Query: 198 ITAFKWVFYWCPDLPLPTI---------YNLFQTFQVLVETEESRSSGAARKPVGDRDVL 350
+TA WV ++ D+P + Y+ +V VET +S+ K + DV+
Sbjct: 113 VTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSVETIKSQKHHL--KKIKHNDVM 170
Query: 351 SSGCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHL 530
G ++LPVS+ +I KKRYE +P T+HPN DEI Y+R LV++KD AI+VLN+P +
Sbjct: 171 EPGMRIHLPVSVAEGEI-KKRYETIPTATLHPNKDEIEYLRRLVIHKDSAILVLNKPPKV 229
Query: 531 PAQASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQCLHDLFRE 710
P + +L +HNSMD LAAA LSY EEGPK+VHR+DRESSG+L+ GRT+ES LH LF
Sbjct: 230 PMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFGRTKESFTRLHWLFTS 289
Query: 711 KNIMPSENKN-SVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPKERVIISR-S 884
N+ + ++ + E + QRYWALVIG PKE+EG+ISAPLSKV LD+ ERVI++ S
Sbjct: 290 VNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGKAERVILAHPS 349
Query: 885 ELDGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIH 1064
+DG QEAVT YRV+GPTI+GCSWIEL PLTGRKHQLRVHCAEALGTPIVGDYKYGW++H
Sbjct: 350 GIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVH 409
Query: 1065 KRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPNVAKKLGLI 1244
+RW+Q Q D +P TG + L+ L + +G+VL+KVPLLHLHCRE+ IPN+AK +
Sbjct: 410 QRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAK---FL 466
Query: 1245 DSNCE--------SAYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
SN E S K N LRF+AP+P HM +SWN+M+S L
Sbjct: 467 SSNGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMSSYL 508
>XP_019249221.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nicotiana
attenuata] XP_019249222.1 PREDICTED: RNA pseudouridine
synthase 3, mitochondrial [Nicotiana attenuata]
OIS99963.1 rna uridine synthase 3, mitochondrial
[Nicotiana attenuata]
Length = 478
Score = 410 bits (1054), Expect = e-136
Identities = 213/397 (53%), Positives = 283/397 (71%), Gaps = 14/397 (3%)
Frame = +3
Query: 198 ITAFKWVFYWCPDLPLPTIYNLFQTFQVLVETEESRSS--GAARKP--VGDRDVLSSGCT 365
+TA W+ Y+ ++P I + F V +E ES +S G R P + +V+ G
Sbjct: 83 VTAISWIKYYFDEIPGSVIQSHFNKGLVQLEFNESSTSKEGQTRLPRKIKHSEVMEVGAR 142
Query: 366 VYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHLPAQAS 545
VY+P+S+ KI KRY+ +P GT++PNADEI Y++ LV YKD AIIVLN+P LP + +
Sbjct: 143 VYVPISVAETKI-SKRYDVIPSGTLYPNADEIAYLQRLVFYKDPAIIVLNKPPKLPVKGN 201
Query: 546 LGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQCLHDLFREKNIMP 725
L +HNSMDALAAA LSYEY+EGP++VHR+DRESSG+ +MGRT+ESI LH LF
Sbjct: 202 LPVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLMGRTEESISHLHLLFSNAKRSK 261
Query: 726 SENK--NSVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPKERVIISR-SELDG 896
S +K N + QRYWALVIG PKEKEG+ISAPL+KV LD+ ERV++++ S L+
Sbjct: 262 SLSKAWNDACGSTY-QRYWALVIGSPKEKEGIISAPLTKVLLDDGRTERVMLAQHSGLEA 320
Query: 897 PQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIHKRWQ 1076
+EA+T YR+LGP INGCSWIEL P T RKHQLRVHCAEALGTPIVGDYKYGW++H++W+
Sbjct: 321 SEEAITEYRLLGPMINGCSWIELRPHTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRKWK 380
Query: 1077 QIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPNVAKKLGLIDS-- 1250
Q+ + DV+P TG+ + LK L+V +G+VL+KVPLLHLHCREL +PN+AK + L
Sbjct: 381 QMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRKT 440
Query: 1251 -----NCESAYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
N +++ K + LRFVAP+P+HM +SW +M+S L
Sbjct: 441 RTRCLNADNSSKPDLLRFVAPMPSHMKISWKLMSSYL 477
>XP_019054042.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X2
[Nelumbo nucifera]
Length = 367
Score = 405 bits (1041), Expect = e-136
Identities = 200/356 (56%), Positives = 267/356 (75%), Gaps = 6/356 (1%)
Frame = +3
Query: 297 ESRSSGAARKPVGDRDVLSSGCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRS 476
E + + K + +V+ G +Y+PVS+ KI KR++ +P GT++PNADEI Y++
Sbjct: 12 EEQGQMQSLKKISPNEVMEVGSRIYVPVSVIETKI-SKRFDTIPSGTLYPNADEIEYLQR 70
Query: 477 LVLYKDRAIIVLNRPTHLPAQASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGIL 656
LV+YKD AIIVLN+P LP + +L +HNSMDALA A LSY YE+GPK+VHR+DRESSG+L
Sbjct: 71 LVMYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAEAALSYGYEQGPKLVHRLDRESSGLL 130
Query: 657 VMGRTQESIQCLHDLFREKNIMPSENKN-SVRDEIFEQRYWALVIGCPKEKEGVISAPLS 833
+MGRT+ESI LH LF + N S K + E QRYWALVIG P+EK+G I APLS
Sbjct: 131 LMGRTKESIARLHWLFSDVNKAKSPLKTWNDACETTTQRYWALVIGSPREKQGRICAPLS 190
Query: 834 KVALDEKPKERVIISR-SELDGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCA 1010
KV L++ ERVI++ S ++ QEA+T +RVLGP INGC+WIELCPLTGRKHQLRVHCA
Sbjct: 191 KVLLNDGKTERVILANPSGVEASQEAITDFRVLGPMINGCTWIELCPLTGRKHQLRVHCA 250
Query: 1011 EALGTPIVGDYKYGWYIHKRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLH 1190
EALGTPIVGDYKYGWY+HK+W+Q+ + D++P TG+ + L+ L+V +G+VL+KVPLLH
Sbjct: 251 EALGTPIVGDYKYGWYVHKKWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLH 310
Query: 1191 LHCRELAIPNVAKKLGLIDSNCES----AYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
LHCREL +PN+AK L ++D ++ + + + LRFVAP+P+HM +SWN+M+S L
Sbjct: 311 LHCRELILPNIAKFLDILDRKSQNLPKFSSRPDVLRFVAPMPSHMKISWNLMSSYL 366
>XP_002267010.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Vitis
vinifera]
Length = 479
Score = 409 bits (1050), Expect = e-136
Identities = 207/401 (51%), Positives = 284/401 (70%), Gaps = 18/401 (4%)
Frame = +3
Query: 198 ITAFKWVFYWCPDLPLPTIYNLFQTFQVLVETEESRSSGAAR-------KPVGDRDVLSS 356
+TA W+ Y+ ++P + + F V +E S + + + +V+ +
Sbjct: 81 VTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIKPLRKIKPNEVMEA 140
Query: 357 GCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHLPA 536
G +Y+PVS+ +I KR++ +P GT+HPNADEI Y++ LV YKD AI+VLN+P +P
Sbjct: 141 GTRIYVPVSVAEARI-SKRFDTIPSGTLHPNADEIEYLQRLVTYKDPAILVLNKPPKVPL 199
Query: 537 QASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQCLHDLFREKN 716
+ +L +HNSMDALAAA L+++YEEGPK+VHR+DRESSG+L+MGRT+ES+ LH LF + N
Sbjct: 200 KGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLFSDIN 259
Query: 717 IMPSENKNSVRDEIFE---QRYWALVIGCPKEKEGVISAPLSKVALDEKPKERVIIS-RS 884
S +K D+ E QRYWALVIG PK+KEGVI APLSKV LD+ ERVI++ +S
Sbjct: 260 KAKSLSK--AWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILANQS 317
Query: 885 ELDGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIH 1064
L+ QEA+T YRVLGP INGCSWIELCP T RKHQLRVHCAEALGTPIVGDYKYGW++H
Sbjct: 318 GLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVH 377
Query: 1065 KRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPNVAKKLGLI 1244
+RW+Q+ + D++P TG+ + ++ L+V +G+VL+KVPLLHLHCREL +PN+AK L ++
Sbjct: 378 RRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPIL 437
Query: 1245 DSNCES-------AYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
D ++ + K + LRFVA +P HM +SWN+M+S L
Sbjct: 438 DPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYL 478
>XP_015650455.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
[Oryza sativa Japonica Group]
Length = 387
Score = 405 bits (1041), Expect = e-136
Identities = 209/375 (55%), Positives = 269/375 (71%), Gaps = 10/375 (2%)
Frame = +3
Query: 252 IYNLFQTFQVLVETEESRSSGAARKPVGDRDVLSSGCTVYLPVSIYYRKIWKKRYEPLPR 431
+Y+ +V VET +S+ K + DV+ G ++LPVS+ +I KKRYE +P
Sbjct: 18 VYSECSDHEVSVETIKSQKHHL--KKIKHNDVMEPGMRIHLPVSVAEGEI-KKRYETIPT 74
Query: 432 GTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHLPAQASLGIHNSMDALAAATLSYEYEEG 611
T+HPN DEI Y+R LV++KD AI+VLN+P +P + +L +HNSMD LAAA LSY EEG
Sbjct: 75 ATLHPNKDEIEYLRRLVIHKDSAILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEG 134
Query: 612 PKVVHRIDRESSGILVMGRTQESIQCLHDLFREKNIMPSENKN-SVRDEIFEQRYWALVI 788
PK+VHR+DRESSG+L+ GRT+ES LH LF N+ + ++ + E + QRYWALVI
Sbjct: 135 PKLVHRLDRESSGLLLFGRTKESFTRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALVI 194
Query: 789 GCPKEKEGVISAPLSKVALDEKPKERVIISR-SELDGPQEAVTRYRVLGPTINGCSWIEL 965
G PKE+EG+ISAPLSKV LD+ ERVI++ S +DG QEAVT YRV+GPTI+GCSWIEL
Sbjct: 195 GTPKEREGIISAPLSKVLLDDGKAERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIEL 254
Query: 966 CPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIHKRWQQIRQRDVDPDTGRRFLLKLHPHL 1145
PLTGRKHQLRVHCAEALGTPIVGDYKYGW++H+RW+Q Q D +P TG + L+ L
Sbjct: 255 RPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEGL 314
Query: 1146 NVNRGTVLAKVPLLHLHCRELAIPNVAKKLGLIDSNCE--------SAYKKNTLRFVAPL 1301
+ +G+VL+KVPLLHLHCRE+ IPN+AK + SN E S K N LRF+AP+
Sbjct: 315 EIQKGSVLSKVPLLHLHCREMVIPNIAK---FLSSNGEWHENGAPWSKEKPNLLRFIAPM 371
Query: 1302 PTHMAMSWNVMASCL 1346
P HM +SWN+M+S L
Sbjct: 372 PAHMKISWNIMSSYL 386
>XP_006659607.2 PREDICTED: RNA pseudouridine synthase 3, mitochondrial, partial
[Oryza brachyantha]
Length = 418
Score = 406 bits (1044), Expect = e-136
Identities = 211/397 (53%), Positives = 272/397 (68%), Gaps = 14/397 (3%)
Frame = +3
Query: 198 ITAFKWVFYWCPDLPLPTIYNLFQTFQVL-------VETEESRSSGAARKPVGDRDVLSS 356
+TA WV ++ D+P + F V V E +S K + DV+
Sbjct: 22 VTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSVESIKSQKHHLKKIKHNDVMEP 81
Query: 357 GCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHLPA 536
G ++LPVS+ +I KKRYE +P T+HPN DEI Y++ LV++KD +I+VLN+P +P
Sbjct: 82 GMRIHLPVSVAEGEI-KKRYETIPTATLHPNKDEIEYLKRLVIHKDSSILVLNKPPKVPM 140
Query: 537 QASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQCLHDLFREKN 716
+ L +HNSMD LAAA LSY +EGPK+VHR+DRESSG+L+MGRT+ES LH LF N
Sbjct: 141 KGHLPVHNSMDVLAAAALSYGNDEGPKLVHRLDRESSGLLLMGRTKESFTRLHWLFTSVN 200
Query: 717 IMPSENKN-SVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPKERVIISR-SEL 890
+ + ++ + E + QRYWALVIG PKE EG+ISAPLSKV LD+ ERVI++ S +
Sbjct: 201 LAKTNSEAWNAACEAYMQRYWALVIGTPKESEGIISAPLSKVLLDDGKAERVILAHPSGI 260
Query: 891 DGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIHKR 1070
DG QEAVT YRV+GPTI+GCSWIEL PLTGRKHQLRVHCAEALGTPIVGDYKYGW++H+R
Sbjct: 261 DGAQEAVTAYRVMGPTISGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQR 320
Query: 1071 WQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPNVAKKLGLIDS 1250
W+Q Q D +P TG + L+ L + +G+VL+KVPLLHLHCRE+ IPN+AK L
Sbjct: 321 WKQNPQPDFEPFTGEPYKLRRPEGLAIQKGSVLSKVPLLHLHCREMVIPNIAKFLSNTGE 380
Query: 1251 NCE-----SAYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
E S K N LRF+AP+P HM +SWN+M+S L
Sbjct: 381 WHENGTPWSKEKPNLLRFIAPMPAHMKISWNIMSSYL 417
>XP_004974856.2 PREDICTED: RNA pseudouridine synthase 3, mitochondrial, partial
[Setaria italica]
Length = 465
Score = 407 bits (1047), Expect = e-136
Identities = 210/397 (52%), Positives = 275/397 (69%), Gaps = 14/397 (3%)
Frame = +3
Query: 198 ITAFKWVFYWCPDLPLPTIYNLFQTFQVLVETEESRSSGAA-------RKPVGDRDVLSS 356
+TA WV ++ D+P + F V E E S + K + DV+
Sbjct: 69 VTAVSWVKHYFADVPQEAVQAHFNRRMVFSECSEHEFSAESIRTQKHHLKKIKHNDVMEP 128
Query: 357 GCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHLPA 536
G ++LPVS+ +I KKRYE +P T+HPN DEI Y+R LV+++D +I+VLN+P +P
Sbjct: 129 GMRIHLPVSVAEGEI-KKRYETIPTATLHPNKDEIEYLRRLVIHRDSSILVLNKPPKVPM 187
Query: 537 QASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQCLHDLFREKN 716
+ L +HNSMD LAAA LSY +EGPK+VHR+DRESSG+++MGRT+ES LH LF N
Sbjct: 188 KGHLPVHNSMDVLAAAALSYGNKEGPKLVHRLDRESSGLILMGRTKESFTQLHWLFTSVN 247
Query: 717 IMPSENKN-SVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPKERVIISR-SEL 890
+ + ++ + E + Q+YWALVIG PKE+EGVISAP+SKV LD+ ERVI++ S +
Sbjct: 248 LARTTSQTWNKACEAYVQKYWALVIGTPKEREGVISAPISKVLLDDGKAERVILAHPSGI 307
Query: 891 DGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIHKR 1070
DG QEA+T YRV+GPTINGCSWIEL PLTGRKHQLRVHCAEALGTPIVGDYKYGW++H+R
Sbjct: 308 DGAQEAITEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQR 367
Query: 1071 WQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPNVAKKLGLI-- 1244
W+Q Q D +P TG + ++ L V +G+VL+KVPLLHLHCRE+ +PN+AK L I
Sbjct: 368 WKQNPQPDFEPFTGEPYKIRRPEGLEVQKGSVLSKVPLLHLHCREMVLPNIAKFLSSIGE 427
Query: 1245 --DSNCESAYKK-NTLRFVAPLPTHMAMSWNVMASCL 1346
D A +K N LRF+AP+P HM +SWNVM+S L
Sbjct: 428 WHDGGAAWAKEKPNLLRFIAPMPPHMKISWNVMSSYL 464
>XP_009620200.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
[Nicotiana tomentosiformis] XP_009620208.1 PREDICTED: RNA
pseudouridine synthase 3, mitochondrial isoform X1
[Nicotiana tomentosiformis] XP_009620216.1 PREDICTED: RNA
pseudouridine synthase 3, mitochondrial isoform X1
[Nicotiana tomentosiformis] XP_009620223.1 PREDICTED: RNA
pseudouridine synthase 3, mitochondrial isoform X1
[Nicotiana tomentosiformis]
Length = 478
Score = 408 bits (1048), Expect = e-136
Identities = 211/397 (53%), Positives = 283/397 (71%), Gaps = 14/397 (3%)
Frame = +3
Query: 198 ITAFKWVFYWCPDLPLPTIYNLFQTFQVLVETEESRSS--GAAR--KPVGDRDVLSSGCT 365
+TA W+ Y+ ++P I + F V +E ES +S G R + + +V+ G
Sbjct: 83 VTAISWIKYYFDEIPGSVIQSHFNKGLVQLEFNESSTSKEGQTRLLRKIKHSEVMEVGAR 142
Query: 366 VYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHLPAQAS 545
VY+P+S+ KI KRY+ +P GT++PNADEI Y++ LV YKD A+IVLN+P LP + +
Sbjct: 143 VYVPISVAETKI-SKRYDVIPSGTLYPNADEIAYLQRLVFYKDPALIVLNKPPKLPVKGN 201
Query: 546 LGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQCLHDLFREKNIMP 725
L +HNSMDALAAA LSYEY+EGP++VHR+DRESSG+ +MGRT+ESI LH LF
Sbjct: 202 LPVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLMGRTEESISHLHLLFSNAKRSK 261
Query: 726 SENK--NSVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPKERVIISR-SELDG 896
S +K N + QRYWALVIG PKEKEG+ISAPL+KV LD+ ERV++++ S L+
Sbjct: 262 SLSKAWNDACGSTY-QRYWALVIGSPKEKEGIISAPLTKVLLDDGRTERVMLAQHSGLEA 320
Query: 897 PQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIHKRWQ 1076
+EA+T YR+LGP INGCSWIEL P T RKHQLRVHCAEALGTPIVGDYKYGW++H++W+
Sbjct: 321 SEEAITEYRLLGPMINGCSWIELRPHTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRKWK 380
Query: 1077 QIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPNVAKKLGLIDS-- 1250
Q+ + DV+P TG+ + LK L+V +G+VL+KVPLLHLHCREL +PN+AK + L
Sbjct: 381 QMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRKT 440
Query: 1251 -----NCESAYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
N +++ K + LRFVAP+P+HM +SW +M+S L
Sbjct: 441 RTRCLNADNSSKPDLLRFVAPMPSHMKISWKLMSSYL 477
>XP_016433864.1 PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
[Nicotiana tabacum] XP_016433865.1 PREDICTED: RNA
pseudouridine synthase 3, mitochondrial-like [Nicotiana
tabacum] XP_016433866.1 PREDICTED: RNA pseudouridine
synthase 3, mitochondrial-like [Nicotiana tabacum]
XP_016433867.1 PREDICTED: RNA pseudouridine synthase 3,
mitochondrial-like [Nicotiana tabacum]
Length = 478
Score = 407 bits (1047), Expect = e-135
Identities = 211/397 (53%), Positives = 282/397 (71%), Gaps = 14/397 (3%)
Frame = +3
Query: 198 ITAFKWVFYWCPDLPLPTIYNLFQTFQVLVETEESRSS--GAAR--KPVGDRDVLSSGCT 365
+TA W+ Y+ ++P I + F V +E ES +S G R + + +V+ G
Sbjct: 83 VTAISWIKYYFDEIPGSVIQSHFNKGLVQLEFNESSTSKEGQTRLLRKIKHSEVMEVGAR 142
Query: 366 VYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHLPAQAS 545
VY+P+S+ KI KRY+ +P GT++PNADEI Y++ LV YKD A+IVLN+P LP + +
Sbjct: 143 VYVPISVAETKI-SKRYDVIPSGTLYPNADEIAYLQRLVFYKDPALIVLNKPPKLPVKGN 201
Query: 546 LGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQCLHDLFREKNIMP 725
L +HNSMDALAAA LSYEY+EGP++VHR+DRESSG+ +MGRT+ESI LH LF
Sbjct: 202 LPVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLMGRTEESISHLHLLFSNAKRSK 261
Query: 726 SENK--NSVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPKERVIISR-SELDG 896
S +K N + QRYWALVIG PKEKEG+ISAPL+KV LD+ ERV++++ S L+
Sbjct: 262 SLSKAWNDACGSTY-QRYWALVIGSPKEKEGIISAPLTKVLLDDGRTERVMLAQHSGLEA 320
Query: 897 PQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIHKRWQ 1076
+EA+T YR+LGP INGCSWIEL P T RKHQLRVHCAEALGTPIVGDYKYGW++H++W+
Sbjct: 321 SEEAITEYRLLGPMINGCSWIELRPHTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRKWK 380
Query: 1077 QIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPNVAKKLGLIDS-- 1250
Q+ + DV+P TG+ + LK L+V +G+VL+KVPLLHLHCREL +PN+AK + L
Sbjct: 381 QMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRKT 440
Query: 1251 -----NCESAYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
N ++ K + LRFVAP+P+HM +SW +M+S L
Sbjct: 441 RTRCLNADNCSKPDLLRFVAPMPSHMKISWKLMSSYL 477
>KQL02517.1 hypothetical protein SETIT_013670mg [Setaria italica]
Length = 478
Score = 407 bits (1047), Expect = e-135
Identities = 210/397 (52%), Positives = 275/397 (69%), Gaps = 14/397 (3%)
Frame = +3
Query: 198 ITAFKWVFYWCPDLPLPTIYNLFQTFQVLVETEESRSSGAA-------RKPVGDRDVLSS 356
+TA WV ++ D+P + F V E E S + K + DV+
Sbjct: 82 VTAVSWVKHYFADVPQEAVQAHFNRRMVFSECSEHEFSAESIRTQKHHLKKIKHNDVMEP 141
Query: 357 GCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAIIVLNRPTHLPA 536
G ++LPVS+ +I KKRYE +P T+HPN DEI Y+R LV+++D +I+VLN+P +P
Sbjct: 142 GMRIHLPVSVAEGEI-KKRYETIPTATLHPNKDEIEYLRRLVIHRDSSILVLNKPPKVPM 200
Query: 537 QASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESIQCLHDLFREKN 716
+ L +HNSMD LAAA LSY +EGPK+VHR+DRESSG+++MGRT+ES LH LF N
Sbjct: 201 KGHLPVHNSMDVLAAAALSYGNKEGPKLVHRLDRESSGLILMGRTKESFTQLHWLFTSVN 260
Query: 717 IMPSENKN-SVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPKERVIISR-SEL 890
+ + ++ + E + Q+YWALVIG PKE+EGVISAP+SKV LD+ ERVI++ S +
Sbjct: 261 LARTTSQTWNKACEAYVQKYWALVIGTPKEREGVISAPISKVLLDDGKAERVILAHPSGI 320
Query: 891 DGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVGDYKYGWYIHKR 1070
DG QEA+T YRV+GPTINGCSWIEL PLTGRKHQLRVHCAEALGTPIVGDYKYGW++H+R
Sbjct: 321 DGAQEAITEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQR 380
Query: 1071 WQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIPNVAKKLGLI-- 1244
W+Q Q D +P TG + ++ L V +G+VL+KVPLLHLHCRE+ +PN+AK L I
Sbjct: 381 WKQNPQPDFEPFTGEPYKIRRPEGLEVQKGSVLSKVPLLHLHCREMVLPNIAKFLSSIGE 440
Query: 1245 --DSNCESAYKK-NTLRFVAPLPTHMAMSWNVMASCL 1346
D A +K N LRF+AP+P HM +SWNVM+S L
Sbjct: 441 WHDGGAAWAKEKPNLLRFIAPMPPHMKISWNVMSSYL 477
>BAT06289.1 Os08g0520100, partial [Oryza sativa Japonica Group]
Length = 355
Score = 402 bits (1033), Expect = e-135
Identities = 203/351 (57%), Positives = 258/351 (73%), Gaps = 10/351 (2%)
Frame = +3
Query: 324 KPVGDRDVLSSGCTVYLPVSIYYRKIWKKRYEPLPRGTMHPNADEIRYIRSLVLYKDRAI 503
K + DV+ G ++LPVS+ +I KKRYE +P T+HPN DEI Y+R LV++KD AI
Sbjct: 8 KKIKHNDVMEPGMRIHLPVSVAEGEI-KKRYETIPTATLHPNKDEIEYLRRLVIHKDSAI 66
Query: 504 IVLNRPTHLPAQASLGIHNSMDALAAATLSYEYEEGPKVVHRIDRESSGILVMGRTQESI 683
+VLN+P +P + +L +HNSMD LAAA LSY EEGPK+VHR+DRESSG+L+ GRT+ES
Sbjct: 67 LVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFGRTKESF 126
Query: 684 QCLHDLFREKNIMPSENKN-SVRDEIFEQRYWALVIGCPKEKEGVISAPLSKVALDEKPK 860
LH LF N+ + ++ + E + QRYWALVIG PKE+EG+ISAPLSKV LD+
Sbjct: 127 TRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGKA 186
Query: 861 ERVIISR-SELDGPQEAVTRYRVLGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVG 1037
ERVI++ S +DG QEAVT YRV+GPTI+GCSWIEL PLTGRKHQLRVHCAEALGTPIVG
Sbjct: 187 ERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVG 246
Query: 1038 DYKYGWYIHKRWQQIRQRDVDPDTGRRFLLKLHPHLNVNRGTVLAKVPLLHLHCRELAIP 1217
DYKYGW++H+RW+Q Q D +P TG + L+ L + +G+VL+KVPLLHLHCRE+ IP
Sbjct: 247 DYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIP 306
Query: 1218 NVAKKLGLIDSNCE--------SAYKKNTLRFVAPLPTHMAMSWNVMASCL 1346
N+AK + SN E S K N LRF+AP+P HM +SWN+M+S L
Sbjct: 307 NIAK---FLSSNGEWHENGAPWSKEKPNLLRFIAPMPAHMKISWNIMSSYL 354