BLASTX nr result
ID: Ephedra29_contig00010564
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00010564
(2896 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAE26586.1 hypothetical protein AXG93_4542s1070 [Marchantia poly... 851 0.0
AAS55439.1 RNA polymerase I largest subunit, partial [Ephedra vi... 787 0.0
XP_002981487.1 hypothetical protein SELMODRAFT_233747 [Selaginel... 815 0.0
ERN11762.1 hypothetical protein AMTR_s00022p00245030 [Amborella ... 682 0.0
XP_011625527.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 682 0.0
XP_010251904.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 664 0.0
AAS55438.1 RNA polymerase I largest subunit, partial [Welwitschi... 627 0.0
XP_009394527.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 647 0.0
XP_009407703.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 645 0.0
XP_008798769.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 643 0.0
XP_020114580.1 DNA-directed RNA polymerase I subunit 1 [Ananas c... 637 0.0
XP_010922210.1 PREDICTED: DNA-directed RNA polymerase I subunit ... 637 0.0
AIO05696.1 putative RNA polymerase AI large subunit, partial [Co... 636 0.0
AAS55442.1 RNA polymerase I largest subunit, partial [Pinus nigra] 599 0.0
AAS55443.1 RNA polymerase I largest subunit, partial [Cycas revo... 597 0.0
AAS55436.1 RNA polymerase I largest subunit, partial [Podocarpus... 595 0.0
JAT60449.1 DNA-directed RNA polymerase I subunit rpa1 [Anthurium... 622 0.0
ACJ63314.1 RNA polymerase I large subunit, partial [Illicium par... 591 0.0
JAT44689.1 DNA-directed RNA polymerase I subunit RPA190 [Anthuri... 622 0.0
AAS55445.1 RNA polymerase I largest subunit, partial [Ginkgo bil... 588 0.0
>OAE26586.1 hypothetical protein AXG93_4542s1070 [Marchantia polymorpha subsp.
polymorpha]
Length = 1698
Score = 851 bits (2198), Expect = 0.0
Identities = 479/961 (49%), Positives = 621/961 (64%), Gaps = 36/961 (3%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
V+TT+ +YIT GS PFSM + P YWG S E V++Q+NEL+CGVIDKAQFGKYG+
Sbjct: 742 VMTTVFNYITHGSPPFSMSAGIKTPKEYWGLNSGENIVLLQDNELICGVIDKAQFGKYGI 801
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH ELYG AG+LLSVFSRLFT ++QMHGFTCG DLLL P AE RR KL KA +
Sbjct: 802 VHAFQELYGCAGAGKLLSVFSRLFTNYLQMHGFTCGIGDLLLVPKAEKERRHKLRKADKL 861
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXI------------------LRSKGESSSARLDR 2411
GD HA+F+G + LR+KGE +S RLDR
Sbjct: 862 GDSVHAKFIGDPETQAGCAIFLQCLNFLAVLTDIDVERVKDQVEKILRAKGEPASNRLDR 921
Query: 2410 LMSGALNKITSEVNGSVFPDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEG 2231
+MSGALN +TSEVN ++FP GL K F N ++MT+TGAKGG+VNFTQISSLLGQQELEG
Sbjct: 922 MMSGALNGVTSEVNNAMFPKGLMKAFPGNWFTMMTVTGAKGGLVNFTQISSLLGQQELEG 981
Query: 2230 KRVPRMISGKTLPCFSPWDTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTS 2051
KRVPRM+SGKTLPCFSPWDT RAGGFI DRFL+GLRPQEYYFHCMAGRDGLVDTAVKTS
Sbjct: 982 KRVPRMVSGKTLPCFSPWDTGARAGGFIGDRFLSGLRPQEYYFHCMAGRDGLVDTAVKTS 1041
Query: 2050 RSGYLQRCLIKNLECLTVFYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQK 1871
RSGYLQRCL+KNLE L + YD+TVRDSDGS++QF YGEDG+DV K+S LT FE+LA NQ
Sbjct: 1042 RSGYLQRCLVKNLEGLKIHYDYTVRDSDGSIVQFKYGEDGIDVLKTSYLTKFELLADNQS 1101
Query: 1870 LLSQKLCKEQFNDFTDRKLARKNSSASVCDATDIPEKL---------KEKAHKYIYKLSG 1718
L+S++L K++ T+R + SS S T++ E + +K ++ L
Sbjct: 1102 LVSRRLGKDEMQ--TERSKQKDTSSQS--KETEVEEDMALGGVSPAFNQKVEDFLKGLPK 1157
Query: 1717 KEKHLWKLRKPKK---FLDLLRVKYNSSLAEPGEAVGVVAGQSVGEPSTQMTLNTFHFAG 1547
KE LRK ++ F ++++K+ +SLA PGE VGV+A QSVGEPSTQMTLNTFHFAG
Sbjct: 1158 KELKRLNLRKSRQKDDFKFMMQLKFITSLAPPGEPVGVLAAQSVGEPSTQMTLNTFHFAG 1217
Query: 1546 RGEMNVTLGIPRLREILMAASKNILTPVMTCRVKDGKTREDAERLAGKFRRIRFADLIET 1367
RGEMNVTLGIPRLREILM AS+NI TP+MTC ++ T+ED ERLA RR+R DLIET
Sbjct: 1218 RGEMNVTLGIPRLREILMTASENISTPIMTCPLRSHLTKEDGERLAMTMRRLRLVDLIET 1277
Query: 1366 MDVGVVPFAVKAGVMQNTYKLKIKLYSPENYPSHSRISLEKCKSIFEEVFSKEMXXXXXX 1187
+DVG +PF+V+ G+ + YK++IKLYSP+ +P ++L++C++I + F +
Sbjct: 1278 VDVGEIPFSVQQGIPKRVYKIRIKLYSPKRFPPGMNLTLKECETILRDSFIPRLEKEVKA 1337
Query: 1186 XXXXXXXXAE-GAVQVFSESQPIDESGMLSDDEVQANSGQKKPDNDTXXXXXXXXXXXXX 1010
G V + + ESG DD+ + + +K + D
Sbjct: 1338 ATRGHSKQDAIGFVPLRDLGEGAGESGAGVDDDGVSKASKKGKEVD--EGEQAEDEEEDE 1395
Query: 1009 XXXXXXXXYKRKVQGTXXXXXXXXXXXXEKSMA-EYFSTEANTXXXXXXXXXXDMQNTLA 833
KRK QGT EK++A + + T A
Sbjct: 1396 GDEEGADAEKRKSQGTDERGYADEEDDDEKAIAKDLLQEDELTREEEVEEEEDGAGGGKA 1455
Query: 832 EED--SLVDEMSSRSMVTDLGXXXXXXXXXKNDSTVSVTSGRTLTWEYSVMENSHILLAP 659
++ S + ++ +T + ND+ + + G T +++ + +++L+
Sbjct: 1456 NDNNGSGDQQANTEEGITPMKLKKLKTPKRANDNMLQM-DGSTFEMQFTSSQQTNLLV-- 1512
Query: 658 IAEKVANKVYVQSVTNIDKCAVIEIKEKK--DDPPIPALQTNGINFEAFWKLDNELDINR 485
EKVA +V V+ V IDKC+VIE K+KK D PP+ ALQT+G+N E FW L ++LD+N
Sbjct: 1513 --EKVAKQVSVRYVKGIDKCSVIETKDKKNPDGPPLYALQTDGVNLEGFWALHDDLDVNN 1570
Query: 484 LMTNDINKVLEVYGVEAACATIVLEVQNVFDSYGITVDRRHLSLIADFMTFNGGYRPLNR 305
L TN+I +L VYGVEAA TI+ EV +VF SYGI V+ RHLSLI+DFMT GGYRP NR
Sbjct: 1571 LTTNNIATILRVYGVEAARQTIMSEVLSVFGSYGIGVNPRHLSLISDFMTCQGGYRPCNR 1630
Query: 304 IGIDSSTSPFLKISFETATKFLVDSCLQGETDYLASPSARIVLGQVAKMGTGCFDILQNL 125
+GI SS SPFLK+S+ETAT FL+D+ L+ + D L+SPSARIV+G+V + GTG F++LQN+
Sbjct: 1631 LGIYSSPSPFLKMSYETATTFLMDATLKRQRDNLSSPSARIVMGRVVESGTGSFELLQNI 1690
Query: 124 E 122
+
Sbjct: 1691 D 1691
>AAS55439.1 RNA polymerase I largest subunit, partial [Ephedra viridis]
Length = 534
Score = 787 bits (2032), Expect = 0.0
Identities = 402/438 (91%), Positives = 404/438 (92%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL
Sbjct: 113 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 172
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VHVVHELYGADAAGRLLSVFSRLFTCFMQ AEI RREKLAKAKEE
Sbjct: 173 VHVVHELYGADAAGRLLSVFSRLFTCFMQ----------------AEIERREKLAKAKEE 216
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
GDKAHAQFLGKDA ILRSKGESSSARLDRLMSGALNKITSEVNGSVF
Sbjct: 217 GDKAHAQFLGKDAKEIDLGKIEEEIEKILRSKGESSSARLDRLMSGALNKITSEVNGSVF 276
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW
Sbjct: 277 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 336
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D QPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV
Sbjct: 337 DIQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 396
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKE+FNDFTDRK
Sbjct: 397 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEKFNDFTDRK 456
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
LARK+SSASVCDATDIPEKLKEKAHKYIYKLS KEKHLWKLRKPKKFLDLLRVKY SSLA
Sbjct: 457 LARKSSSASVCDATDIPEKLKEKAHKYIYKLSEKEKHLWKLRKPKKFLDLLRVKYISSLA 516
Query: 1636 EPGEAVGVVAGQSVGEPS 1583
EPGEAVGVVAGQSVGEPS
Sbjct: 517 EPGEAVGVVAGQSVGEPS 534
>XP_002981487.1 hypothetical protein SELMODRAFT_233747 [Selaginella moellendorffii]
EFJ17302.1 hypothetical protein SELMODRAFT_233747
[Selaginella moellendorffii]
Length = 1578
Score = 815 bits (2105), Expect = 0.0
Identities = 470/936 (50%), Positives = 609/936 (65%), Gaps = 10/936 (1%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
V+TTIL+Y+TRG PFSM++ RV Y G+ S EL+V+++ N+ +CG+IDKAQFGK+GL
Sbjct: 688 VLTTILNYVTRGRPPFSMERGIRVSGDYIGKTSEELKVLVRGNDFLCGIIDKAQFGKFGL 747
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH V ELYGAD AG LLSVFSRLFT ++ MHGFTCG D+LL P AE R KL A+ E
Sbjct: 748 VHTVQELYGADDAGHLLSVFSRLFTSYLFMHGFTCGIADMLLLPGAEEERAAKLEPAENE 807
Query: 2536 -GDKAHAQFLG---KDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVN 2369
GD H +F+G K IL+ + ++ ARLD LMS A+NK+TSEVN
Sbjct: 808 LGDIVHGRFVGVEDKQLSSVGIEAIKDMTGRILQLRADAGRARLDMLMSSAMNKVTSEVN 867
Query: 2368 GSVFPDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPC 2189
++FP GL KPF +NCLSLMT+TGAKGGMVNFTQISS+LGQQELEGKRVPRM+SGKTLPC
Sbjct: 868 NALFPKGLVKPFPENCLSLMTVTGAKGGMVNFTQISSMLGQQELEGKRVPRMVSGKTLPC 927
Query: 2188 FSPWDTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLE 2009
F P++ R+GGFI DRFLTGLRPQEYY+HCMAGRDGLVDTAVKT++SGYLQRC+IKNLE
Sbjct: 928 FQPYEPVARSGGFIKDRFLTGLRPQEYYYHCMAGRDGLVDTAVKTAKSGYLQRCIIKNLE 987
Query: 2008 CLTVFYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKL-CKEQFND 1832
CL + YD TVRD+DGSVIQF YGED VDVTKSSCLT F+++A N+ L++QKL E D
Sbjct: 988 CLKINYDFTVRDADGSVIQFFYGEDAVDVTKSSCLTNFDLMATNRDLITQKLGLGEHAKD 1047
Query: 1831 FTDRKLARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKL---RKPKKFLDLLR 1661
+ K A + A + TDIPE +++K K++ LS ++K +KL R K+ ++
Sbjct: 1048 VKNMK-AIVSKDAYI---TDIPEAMEQKFEKFMGGLSEEKKKAYKLYRRRHIKELRSVMT 1103
Query: 1660 VKYNSSLAEPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASK 1481
KY +SLA PGE VGV+AGQS+GEPSTQMTLNTFHFAGRGEMNVTLGIPRL EIL ASK
Sbjct: 1104 HKYFASLAAPGEPVGVLAGQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLHEILTVASK 1163
Query: 1480 NILTPVMTCRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLK 1301
I TP+MTC +K GKTR++ ++LAG ++ D++ET++V VPF V GV YK++
Sbjct: 1164 AIKTPIMTCPLKPGKTRDEGQKLAGVMTKVMLPDILETVEVSAVPFYVHHGVPSRLYKVR 1223
Query: 1300 IKLYSPENYPSHSRISLEKCKSIFEEVFSKEMXXXXXXXXXXXXXXAEGAVQVFSESQPI 1121
+++Y E H I KS+F + KE+ A+ ++Q+ S+
Sbjct: 1224 LRVYPEE----HMAI-----KSVFAKGVRKEI-----EREIKALTSAKDSIQILGISE-- 1267
Query: 1120 DESGMLSDDEVQANSGQKKPDNDTXXXXXXXXXXXXXXXXXXXXXYKRKVQGTXXXXXXX 941
DE + E++ G+KK KRK + T
Sbjct: 1268 DEPSPAGEGEIE--GGKKKV---VEAGEVAEEDDDDDDQEEGADAEKRKGRTT------- 1315
Query: 940 XXXXXEKSMAEYFSTEANTXXXXXXXXXXDMQNTLAEEDSLVDEMSSRSMVTDLGXXXXX 761
+ + E ++ D +N +A+ D+ DE +V D
Sbjct: 1316 ----------DEAAYETDSEQEDEQEMDLDAENDIADGDN--DEEKGGEVVDDEEEGHGK 1363
Query: 760 XXXXKNDSTVSVTSGRTLTWEYSVMENSHILLAP-IAEKVANKVYVQSVTNIDKCAVIEI 584
K S+V GR+ ++ +NS L P I EKV V V+ + NI+KC IE+
Sbjct: 1364 EKEGKKSSSVR-ARGRSYEMKFQANQNSPQLFLPNIVEKVLKTVTVRRMKNIEKCNTIEL 1422
Query: 583 KEKKDDPPIPALQTNGINFEAFWKL-DNELDINRLMTNDINKVLEVYGVEAACATIVLEV 407
K P PALQT+G+NF W L D+ LD+N+L +NDI +L YGVEAA ATIV EV
Sbjct: 1423 NGK---PENPALQTDGVNFWELWSLPDDVLDLNKLTSNDIAAMLNTYGVEAARATIVREV 1479
Query: 406 QNVFDSYGITVDRRHLSLIADFMTFNGGYRPLNRIGIDSSTSPFLKISFETATKFLVDSC 227
Q VF SYGI+V+ RHLSLIADFMTF GGYRPLNR+GI S+ SPFLK+SFETA++FL+D+
Sbjct: 1480 QGVFGSYGISVNARHLSLIADFMTFQGGYRPLNRVGIVSNPSPFLKMSFETASQFLIDAS 1539
Query: 226 LQGETDYLASPSARIVLGQVAKMGTGCFDILQNLEV 119
L+ + D L +PS+RI++G+ +GTGCFD+LQ ++
Sbjct: 1540 LRRQVDELDTPSSRIIVGRTVGLGTGCFDLLQKTDM 1575
>ERN11762.1 hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
Length = 1600
Score = 682 bits (1759), Expect = 0.0
Identities = 352/560 (62%), Positives = 428/560 (76%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VI+TILD++TRG PF++K+ GR+PA Y+G+++ E +V++ NELV GVIDKAQFGK+GL
Sbjct: 653 VISTILDHVTRGQPPFTVKRAGRIPAGYFGKKNGEYKVLVHKNELVHGVIDKAQFGKFGL 712
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH VHELYGA AAGRL SVF+RLFT ++QMHGFTCG DLL+ AE+ RR KL +++
Sbjct: 713 VHAVHELYGASAAGRLFSVFTRLFTAYLQMHGFTCGVDDLLVRQCAEMDRRRKLDESETI 772
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
GD H+ F+G ++R KGES+ ARLDR+MS ALN++TSEVN S+F
Sbjct: 773 GDHVHSWFIGAKDAEMDPIRMQAAIEKLVRGKGESAIARLDRMMSSALNRLTSEVNNSLF 832
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P+GL K F NCLSLMT +GAKGG+VNFTQISSLLGQQELEGKRVPRM+SGKTLPCF PW
Sbjct: 833 PEGLSKSFPSNCLSLMTSSGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFLPW 892
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D+ RAGGFISDRFL GLRPQEYYFHCMAGR+GLVDTA+KT+RSGYLQR L+KNLECL V
Sbjct: 893 DSAARAGGFISDRFLNGLRPQEYYFHCMAGREGLVDTAIKTARSGYLQRRLMKNLECLRV 952
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
YDHTVRDSDGS+I+F YGEDGVDV K+S LT F+ LAAN+K LS +L Q D
Sbjct: 953 NYDHTVRDSDGSIIEFIYGEDGVDVVKTSWLTEFKFLAANKKTLSARLGVHQLED----A 1008
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
L + S D+P+ L+EK +K+I KLS K++ LRK K F +LL++KY SSLA
Sbjct: 1009 LPSEYDSY----IKDLPDALEEKMNKFIEKLSKKKRDSLHLRKLKHFRNLLKLKYFSSLA 1064
Query: 1636 EPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVMT 1457
+PGEAVGV+A QS+GEPSTQMTLNTFHFAG+GEMNVTLGIPRL+EIL A+K+I TPVMT
Sbjct: 1065 QPGEAVGVIAAQSIGEPSTQMTLNTFHFAGQGEMNVTLGIPRLQEIL-GAAKDIRTPVMT 1123
Query: 1456 CRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPEN 1277
C + +TR+DAERLA K RI+FAD+IE+M V VVPF+VK G YKL++ LY PE
Sbjct: 1124 CPLLKQRTRDDAERLAAKLSRIKFADVIESMQVHVVPFSVKNGEACTVYKLRVSLYPPEL 1183
Query: 1276 YPSHSRISLEKCKSIFEEVF 1217
+P HS I+ C F F
Sbjct: 1184 FPEHSDITRADCVKAFRSQF 1203
Score = 202 bits (513), Expect = 2e-49
Identities = 109/208 (52%), Positives = 145/208 (69%), Gaps = 4/208 (1%)
Frame = -1
Query: 730 SVTSGRTLTWEYSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIE---IKEKKDDPP 560
++ +G L + + LL+ AEKVAN YV+SV ID+C+V++ +++ K +PP
Sbjct: 1394 TLDTGEDLEAPFIFPKGCPYLLSQAAEKVANDTYVRSVLGIDQCSVVDYQPVEDYKGEPP 1453
Query: 559 IP-ALQTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYG 383
A+QT G NF W + ++DI L++NDI+ +L+ YGVEAA ATI E+++VF SYG
Sbjct: 1454 SSVAIQTAGTNFLLMWTRE-DVDIKHLVSNDIHAMLKTYGVEAARATIKREIRSVFGSYG 1512
Query: 382 ITVDRRHLSLIADFMTFNGGYRPLNRIGIDSSTSPFLKISFETATKFLVDSCLQGETDYL 203
I V+ RHL LI+DFMT GG RP R GID +TSPFLKI++ETAT+F+VDS + G D L
Sbjct: 1513 IAVNSRHLDLISDFMTAGGGLRPFTRKGIDYNTSPFLKITYETATRFVVDSAIHGLEDAL 1572
Query: 202 ASPSARIVLGQVAKMGTGCFDILQNLEV 119
SPSARIVLGQV KMGTGC +LQNL V
Sbjct: 1573 ESPSARIVLGQVPKMGTGCISVLQNLVV 1600
>XP_011625527.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
rpa1 [Amborella trichopoda]
Length = 1605
Score = 682 bits (1759), Expect = 0.0
Identities = 352/560 (62%), Positives = 428/560 (76%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VI+TILD++TRG PF++K+ GR+PA Y+G+++ E +V++ NELV GVIDKAQFGK+GL
Sbjct: 658 VISTILDHVTRGQPPFTVKRAGRIPAGYFGKKNGEYKVLVHKNELVHGVIDKAQFGKFGL 717
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH VHELYGA AAGRL SVF+RLFT ++QMHGFTCG DLL+ AE+ RR KL +++
Sbjct: 718 VHAVHELYGASAAGRLFSVFTRLFTAYLQMHGFTCGVDDLLVRQCAEMDRRRKLDESETI 777
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
GD H+ F+G ++R KGES+ ARLDR+MS ALN++TSEVN S+F
Sbjct: 778 GDHVHSWFIGAKDAEMDPIRMQAAIEKLVRGKGESAIARLDRMMSSALNRLTSEVNNSLF 837
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P+GL K F NCLSLMT +GAKGG+VNFTQISSLLGQQELEGKRVPRM+SGKTLPCF PW
Sbjct: 838 PEGLSKSFPSNCLSLMTSSGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFLPW 897
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D+ RAGGFISDRFL GLRPQEYYFHCMAGR+GLVDTA+KT+RSGYLQR L+KNLECL V
Sbjct: 898 DSAARAGGFISDRFLNGLRPQEYYFHCMAGREGLVDTAIKTARSGYLQRRLMKNLECLRV 957
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
YDHTVRDSDGS+I+F YGEDGVDV K+S LT F+ LAAN+K LS +L Q D
Sbjct: 958 NYDHTVRDSDGSIIEFIYGEDGVDVVKTSWLTEFKFLAANKKTLSARLGVHQLED----A 1013
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
L + S D+P+ L+EK +K+I KLS K++ LRK K F +LL++KY SSLA
Sbjct: 1014 LPSEYDSY----IKDLPDALEEKMNKFIEKLSKKKRDSLHLRKLKHFRNLLKLKYFSSLA 1069
Query: 1636 EPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVMT 1457
+PGEAVGV+A QS+GEPSTQMTLNTFHFAG+GEMNVTLGIPRL+EIL A+K+I TPVMT
Sbjct: 1070 QPGEAVGVIAAQSIGEPSTQMTLNTFHFAGQGEMNVTLGIPRLQEIL-GAAKDIRTPVMT 1128
Query: 1456 CRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPEN 1277
C + +TR+DAERLA K RI+FAD+IE+M V VVPF+VK G YKL++ LY PE
Sbjct: 1129 CPLLKQRTRDDAERLAAKLSRIKFADVIESMQVHVVPFSVKNGEACTVYKLRVSLYPPEL 1188
Query: 1276 YPSHSRISLEKCKSIFEEVF 1217
+P HS I+ C F F
Sbjct: 1189 FPEHSDITRADCVKAFRSQF 1208
Score = 202 bits (513), Expect = 2e-49
Identities = 109/208 (52%), Positives = 145/208 (69%), Gaps = 4/208 (1%)
Frame = -1
Query: 730 SVTSGRTLTWEYSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIE---IKEKKDDPP 560
++ +G L + + LL+ AEKVAN YV+SV ID+C+V++ +++ K +PP
Sbjct: 1399 TLDTGEDLEAPFIFPKGCPYLLSQAAEKVANDTYVRSVLGIDQCSVVDYQPVEDYKGEPP 1458
Query: 559 IP-ALQTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYG 383
A+QT G NF W + ++DI L++NDI+ +L+ YGVEAA ATI E+++VF SYG
Sbjct: 1459 SSVAIQTAGTNFLLMWTRE-DVDIKHLVSNDIHAMLKTYGVEAARATIKREIRSVFGSYG 1517
Query: 382 ITVDRRHLSLIADFMTFNGGYRPLNRIGIDSSTSPFLKISFETATKFLVDSCLQGETDYL 203
I V+ RHL LI+DFMT GG RP R GID +TSPFLKI++ETAT+F+VDS + G D L
Sbjct: 1518 IAVNSRHLDLISDFMTAGGGLRPFTRKGIDYNTSPFLKITYETATRFVVDSAIHGLEDAL 1577
Query: 202 ASPSARIVLGQVAKMGTGCFDILQNLEV 119
SPSARIVLGQV KMGTGC +LQNL V
Sbjct: 1578 ESPSARIVLGQVPKMGTGCISVLQNLVV 1605
>XP_010251904.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Nelumbo nucifera]
Length = 1676
Score = 664 bits (1714), Expect = 0.0
Identities = 357/615 (58%), Positives = 435/615 (70%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VIT +L++ITRG PFS++K G+ P Y+G+ S E E++I NELV GVIDKAQFG YGL
Sbjct: 748 VITAVLNHITRGRTPFSVRKAGKTPEEYFGKTSGEYELLIHKNELVHGVIDKAQFGGYGL 807
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH V ELYG++AAG LLSV SRLFT F+QMHGFTCG DLL+ ++ R +KL K ++
Sbjct: 808 VHTVQELYGSNAAGVLLSVLSRLFTIFLQMHGFTCGIDDLLIVHRYDLERMKKLDKNEQI 867
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
G+ H QF+G +R G+S+ RLDR MSGA+NK+TSEVN ++F
Sbjct: 868 GEFEHWQFVGCADGDKDPIKLQVEIEKAIRRNGDSAVTRLDRRMSGAMNKLTSEVNKNLF 927
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P+GL KPF KNCLSLMT TGAKGGMVN TQI SLLGQQELEGKRVPRM+SGKTLPCF PW
Sbjct: 928 PEGLCKPFPKNCLSLMTATGAKGGMVNSTQICSLLGQQELEGKRVPRMVSGKTLPCFPPW 987
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D RAGGFISDRFLTGLRPQEYYFHCMAGR+GLVDTAVKTSRSGYLQRCL+KNLE L V
Sbjct: 988 DPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLEGLKV 1047
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
YD+TVRD+DGSV+QF YGEDG+DV K+S L FE LAAN +++ +E+FN+ D +
Sbjct: 1048 CYDYTVRDADGSVVQFIYGEDGIDVHKTSFLEEFEALAANHRIV-----QERFNNQLDSE 1102
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
+ K +P L+ KA YI LS K+ LRK K F+ L+R KY SSLA
Sbjct: 1103 VLFKYDYIK-----KLPVALEGKAKDYIDTLSKKKLKSLNLRKRKDFMKLMRSKYISSLA 1157
Query: 1636 EPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVMT 1457
+PGE VGVVA QSVGEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS+ I TPVMT
Sbjct: 1158 QPGEPVGVVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMRASEKIQTPVMT 1217
Query: 1456 CRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPEN 1277
C ++ GKT +DA+RLA K +++ AD+IE+M+VGVVPF+VK + YKLK+KLY PE
Sbjct: 1218 CPLRKGKTEDDAKRLAAKLQKVTVADVIESMEVGVVPFSVKKHQVSTVYKLKLKLYPPEL 1277
Query: 1276 YPSHSRISLEKCKSIFEEVFSKEMXXXXXXXXXXXXXXAEGAVQVFSESQPIDESGMLSD 1097
YP +S I+L+ C++ + VF EM G V +Q SG +D
Sbjct: 1278 YPPYSGITLKDCQATLKFVFVGEM-EDAIQSHLLMLSKIRGITNVVHSTQ--SNSGDGAD 1334
Query: 1096 DEVQANSGQKKPDND 1052
++ + Q +ND
Sbjct: 1335 EDGPTSKSQAAEEND 1349
Score = 213 bits (543), Expect = 5e-53
Identities = 105/203 (51%), Positives = 139/203 (68%)
Frame = -1
Query: 727 VTSGRTLTWEYSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDDPPIPAL 548
V G + HILLA IA+K A VYV+ NI+ C+V+ K+ +P IP L
Sbjct: 1474 VAEGLDFEVHFRFTNEPHILLAQIAQKTAKNVYVKRSGNIELCSVVVPKKADGEPEIPEL 1533
Query: 547 QTNGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYGITVDR 368
QT+G++F FW + ++LDI RL +NDI+ VL YGVEAA ATI+ +V VF SYGI V+
Sbjct: 1534 QTSGVDFPTFWNMQDDLDIRRLKSNDIHAVLNTYGVEAARATIIEQVNQVFKSYGIAVNI 1593
Query: 367 RHLSLIADFMTFNGGYRPLNRIGIDSSTSPFLKISFETATKFLVDSCLQGETDYLASPSA 188
RHLSLIADFMT GGYRP++R GI + SPF K+S+ETA++F++++ GE D L SPSA
Sbjct: 1594 RHLSLIADFMTQTGGYRPMSRFGIAETISPFSKMSYETASRFVIEAAYHGEMDNLESPSA 1653
Query: 187 RIVLGQVAKMGTGCFDILQNLEV 119
RI LG KMGTGCFD++Q + +
Sbjct: 1654 RICLGLPVKMGTGCFDLMQKINI 1676
>AAS55438.1 RNA polymerase I largest subunit, partial [Welwitschia mirabilis]
Length = 543
Score = 627 bits (1616), Expect = 0.0
Identities = 317/435 (72%), Positives = 361/435 (82%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VITTILD+IT+G+LPFS KK GRVP YWGR+S E+EV+I++NEL+CGVIDKAQFGKYGL
Sbjct: 113 VITTILDHITKGTLPFSSKKAGRVPPDYWGRDSGEIEVLIRDNELICGVIDKAQFGKYGL 172
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH+VHELYGADAAGRLLSVFSRLFT F+QMHGFTCGAVDLLL P AE RR+KL KAK+
Sbjct: 173 VHIVHELYGADAAGRLLSVFSRLFTAFLQMHGFTCGAVDLLLVPKAENERRKKLEKAKKL 232
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
GDK H QFLG ILRSKGE++SARLDRLMS ALN +TS+VN S+F
Sbjct: 233 GDKVHLQFLGLSGQELGEGQMEEEIEKILRSKGETASARLDRLMSSALNGVTSDVNNSLF 292
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P GL PF KNCLSLMT TGAKGGMVNFTQISSLLGQQELEGKRVPRM+SGKTLPCFSPW
Sbjct: 293 PKGLLVPFPKNCLSLMTTTGAKGGMVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFSPW 352
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D+ PRAGGFISDRFLTGLR QEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV
Sbjct: 353 DSSPRAGGFISDRFLTGLRLQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 412
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
FYDHTVRDSDGSV+QF YGEDGVDVTK+SCLT FEILAANQKLLS +L K++F +F K
Sbjct: 413 FYDHTVRDSDGSVVQFIYGEDGVDVTKTSCLTAFEILAANQKLLSHRLHKDKFINFLGGK 472
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
+ ++S +P+ L+ +A + L+ K+K KL K K+F+DLL+++Y SSLA
Sbjct: 473 SSNESSVV-------LPKALQSEARAFFENLTKKQKLSMKLTKAKEFMDLLQLRYISSLA 525
Query: 1636 EPGEAVGVVAGQSVG 1592
+PGEAVGV+AGQS+G
Sbjct: 526 QPGEAVGVIAGQSIG 540
>XP_009394527.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Musa
acuminata subsp. malaccensis]
Length = 1641
Score = 647 bits (1668), Expect = 0.0
Identities = 333/564 (59%), Positives = 411/564 (72%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VIT IL+++TRG LP +++K GR+ Y G + L + I NNELV G+IDKAQFG YGL
Sbjct: 706 VITAILNFVTRGRLPLTIEKRGRIQKEYIGEDHTLLVLHIHNNELVHGMIDKAQFGTYGL 765
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH VHELYG D AG LLSVFSRLFT F+Q+HGFTCG DLLL ++I R L K++ +
Sbjct: 766 VHAVHELYGPDVAGTLLSVFSRLFTSFLQIHGFTCGVDDLLLSQKSDIERERILKKSEIQ 825
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
+ H +F +LR G+S++A LDR+MS +LN +TSE+N ++F
Sbjct: 826 SGEVHMRFTRTKDGDGDPMKLQREIEKVLRGNGDSATALLDRMMSNSLNSLTSEINQTLF 885
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P+GL KPFLKNCLSLMT TGAKGG+VN TQISSLLGQQELEGKRVPRM+SGKTLPCF PW
Sbjct: 886 PNGLLKPFLKNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPW 945
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D RAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTA+KTSRSGYLQRC+IKNLECL V
Sbjct: 946 DISSRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCIIKNLECLKV 1005
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
YDHTVRD+DGSVIQF YGEDG+DV K+S ++ F++L NQK++ QK + +D
Sbjct: 1006 SYDHTVRDADGSVIQFIYGEDGIDVLKASHISEFKMLLDNQKVVLQKFS----DQISDTS 1061
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
LA+ N+ ++P L++KA +I K +K K F+ L+++KY SSLA
Sbjct: 1062 LAKSNAY-----IRELPCSLRDKATDFILK---NQKSFPHQINQKDFMKLMKLKYLSSLA 1113
Query: 1636 EPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVMT 1457
EPGEAVGVVA QSVGEPSTQMTLNTFH AG+G+MNVTLGIPRL+EILM ASK+I TP+M
Sbjct: 1114 EPGEAVGVVAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRTPLMN 1173
Query: 1456 CRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPEN 1277
C + KT++DAERLA K RR+ AD++E M+V VPF++ + YKLK+ LY E
Sbjct: 1174 CPLHVWKTKDDAERLAAKLRRVSLADVVERMEVCTVPFSIHGNQISTIYKLKMTLYPSEL 1233
Query: 1276 YPSHSRISLEKCKSIFEEVFSKEM 1205
YP+ S ++LE CK + E F + M
Sbjct: 1234 YPAFSELTLEDCKEVLETTFVEAM 1257
Score = 203 bits (517), Expect = 7e-50
Identities = 106/194 (54%), Positives = 139/194 (71%), Gaps = 1/194 (0%)
Frame = -1
Query: 697 YSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDDPPIPALQTNGINFEAF 518
Y ILLA IA++ A +VYV+ NI++C++ E K K DP + LQ G+NF
Sbjct: 1451 YIFRSEPRILLAEIAQRTAKRVYVKEYKNIERCSLKENK-KSTDPFM--LQIAGVNFSTL 1507
Query: 517 WKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYGITVDRRHLSLIADFM 338
W L+ LDI + +NDI+ +L YGVEAA ATI+ EV +VF YGI V+ RHLSLIADFM
Sbjct: 1508 WDLEEFLDIIHIYSNDIHAMLNTYGVEAARATIIKEVTDVFGLYGIQVNIRHLSLIADFM 1567
Query: 337 TFNGGYRPLNRIGI-DSSTSPFLKISFETATKFLVDSCLQGETDYLASPSARIVLGQVAK 161
TF+GGYRP+NR+G+ D +TSPF K++FETATKF+++S GE D L SPSA + LGQ K
Sbjct: 1568 TFHGGYRPMNRVGMGDFNTSPFGKMTFETATKFIIESAFHGEVDTLESPSASVSLGQPVK 1627
Query: 160 MGTGCFDILQNLEV 119
MGTGCFD++QNL++
Sbjct: 1628 MGTGCFDLMQNLQL 1641
>XP_009407703.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Musa
acuminata subsp. malaccensis]
Length = 1640
Score = 645 bits (1664), Expect = 0.0
Identities = 329/564 (58%), Positives = 414/564 (73%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VIT IL+++TRG LP +++K GR+ Y G + L + I NN+LV G+IDKAQFG YGL
Sbjct: 710 VITAILNFVTRGHLPLTIEKRGRIQKEYIGEDHTLLVLHIHNNDLVHGMIDKAQFGTYGL 769
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH VHELYG D AG LLSVFSRLFT F+QMHGFTCG DLLL +++ R++ L K++ +
Sbjct: 770 VHAVHELYGPDVAGMLLSVFSRLFTSFLQMHGFTCGVDDLLLSQKSDMERKKILEKSETQ 829
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
++ H +F +LR G+S++A LDR+MS +LN +TSE+N ++F
Sbjct: 830 AEEVHMRFTRTKDGDGDPMELQREIEKVLRGNGDSATALLDRMMSNSLNSLTSEINQTLF 889
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P+GL KPFLKNCLSLMT TGAKGG+VN TQISSLLGQQELEGKRVPRM+SGKTLPCF PW
Sbjct: 890 PNGLSKPFLKNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPW 949
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D R+GGFISDRFLTGLRPQEYYFHCMAGRDGLVDTA+KTSRSGYLQRCLIKNLECL V
Sbjct: 950 DISSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLECLKV 1009
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
YDHTVRD+DGSV+QF YGEDGVDV K+S ++ F++L+ N+ ++ QK + D
Sbjct: 1010 SYDHTVRDADGSVVQFIYGEDGVDVLKTSYISEFKMLSDNRNVVLQKFS----DQIVDTS 1065
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
LA+ N+ ++P L++ A ++ K H ++ K K F+ L+++KY SSLA
Sbjct: 1066 LAKSNAY-----IRELPCSLRDNATDFVLKKQKSSPH--QINK-KDFMKLMKLKYLSSLA 1117
Query: 1636 EPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVMT 1457
EPGEAVGVVA QSVGEPSTQMTLNTFH AG+G+MNVTLGIPRL+EILM ASK+I TP+M
Sbjct: 1118 EPGEAVGVVAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRTPLMN 1177
Query: 1456 CRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPEN 1277
C + KT++DAERLA K RR+ AD++E M+V VPF++ + YKLK+ LY E
Sbjct: 1178 CPLHAWKTKDDAERLAAKLRRVSVADVVERMEVCTVPFSIHRNQISTIYKLKMTLYPSEL 1237
Query: 1276 YPSHSRISLEKCKSIFEEVFSKEM 1205
YPS S ++LE C+ + E F + M
Sbjct: 1238 YPSFSELTLEDCREVLEMTFVEAM 1261
Score = 208 bits (529), Expect = 2e-51
Identities = 108/194 (55%), Positives = 141/194 (72%), Gaps = 1/194 (0%)
Frame = -1
Query: 697 YSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDDPPIPALQTNGINFEAF 518
Y ILLA IA++ A +VYV+ NI++C++ E K K DP + LQ G+NF+
Sbjct: 1450 YIFRSEPRILLAEIAQRTAKRVYVKEYKNIERCSLKENK-KSTDPFM--LQIAGVNFKTL 1506
Query: 517 WKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYGITVDRRHLSLIADFM 338
W L+ LDIN + +NDI+ +L YGVEAA ATI+ EV +VF YGI V+ RHLSLIADFM
Sbjct: 1507 WDLEEYLDINHIYSNDIHAMLNTYGVEAARATIIQEVTDVFGLYGIQVNIRHLSLIADFM 1566
Query: 337 TFNGGYRPLNRIGI-DSSTSPFLKISFETATKFLVDSCLQGETDYLASPSARIVLGQVAK 161
TF+GGYRP+NR+G+ D +TSPF K++FETATKF+V+S GE D L SPSA + LGQ K
Sbjct: 1567 TFHGGYRPMNRVGMGDFNTSPFGKMTFETATKFIVESAFHGEVDTLESPSASVSLGQPVK 1626
Query: 160 MGTGCFDILQNLEV 119
MGTGCFD++QNL++
Sbjct: 1627 MGTGCFDLMQNLQL 1640
>XP_008798769.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Phoenix
dactylifera]
Length = 1665
Score = 643 bits (1658), Expect = 0.0
Identities = 331/553 (59%), Positives = 409/553 (73%), Gaps = 1/553 (0%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VIT IL++ITRG PF+++ GR+P Y G+ EL+++I NN+L+ G++DKAQFGKYGL
Sbjct: 722 VITAILNHITRGRPPFTVENKGRIPKEYLGKNHNELKLLIYNNDLIHGMVDKAQFGKYGL 781
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH +HELYGAD AG LLSVFSRLFT F+QMHGFTCG DLLL +++ R+ L K++
Sbjct: 782 VHTIHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSDMERKRILEKSEAL 841
Query: 2536 GDKAHAQFLG-KDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSV 2360
+ H +F KD + R++ ES++ LDR+MS ++N +TSEVN ++
Sbjct: 842 SEDVHIRFTAFKDGDRDPMKLQREIEKVLCRNR-ESATTLLDRMMSSSMNVLTSEVNQTL 900
Query: 2359 FPDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSP 2180
FP GL+KPFL+NCLSLMT TGAKGG+VN TQISSLLGQQELEGKRVPRM+SGKTLPCF P
Sbjct: 901 FPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPP 960
Query: 2179 WDTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLT 2000
WD RAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCL+KNLECL
Sbjct: 961 WDVSCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLVKNLECLK 1020
Query: 1999 VFYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDR 1820
V YDHTVRD+DGSVIQF YGEDGVDV K+S ++ LAANQ ++ +L + D
Sbjct: 1021 VSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDRLSSQ----LEDA 1076
Query: 1819 KLARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSL 1640
L++ N ++P L+E A + + L ++++ K + L+++KY SSL
Sbjct: 1077 HLSKSNGYIK-----ELPYLLRENATTFARLSKNHQGSLHQIKR-KDLMKLMKLKYLSSL 1130
Query: 1639 AEPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVM 1460
AEPGE VGV+A QSVGEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS +I TPVM
Sbjct: 1131 AEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVDIRTPVM 1190
Query: 1459 TCRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPE 1280
TC + DG+TREDAERLA K RR+ AD++E+M+V VPF + + YKLK+ LY PE
Sbjct: 1191 TCPLHDGRTREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLKMNLYPPE 1250
Query: 1279 NYPSHSRISLEKC 1241
YP HS ++LE C
Sbjct: 1251 LYPPHSSLTLEDC 1263
Score = 219 bits (558), Expect = 6e-55
Identities = 112/194 (57%), Positives = 146/194 (75%), Gaps = 1/194 (0%)
Frame = -1
Query: 697 YSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDDPPIPALQTNGINFEAF 518
Y + ILLA +A+K A VYV+ NI+ C+V E KKD+P +LQT G+NF+AF
Sbjct: 1476 YIFKKEPRILLAEVAQKAAKSVYVKESKNIELCSVTE--PKKDEPL--SLQTAGVNFQAF 1531
Query: 517 WKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYGITVDRRHLSLIADFM 338
W L++ LDIN++ +NDI+ +L YGVEAA ATI+ EV+ VFD+YGI V+ RHL LIADFM
Sbjct: 1532 WDLEDHLDINKITSNDIHAMLNTYGVEAARATIIKEVKGVFDAYGIRVNIRHLMLIADFM 1591
Query: 337 TFNGGYRPLNRIGI-DSSTSPFLKISFETATKFLVDSCLQGETDYLASPSARIVLGQVAK 161
TF+GGYRP+NRIG+ D +TSPF K++FETATKF+V S GE D L +PSA + LGQ K
Sbjct: 1592 TFHGGYRPMNRIGMTDFNTSPFGKMTFETATKFIVGSAFHGEVDTLDAPSASVCLGQPVK 1651
Query: 160 MGTGCFDILQNLEV 119
MGTGCFD++QNL++
Sbjct: 1652 MGTGCFDLMQNLQL 1665
>XP_020114580.1 DNA-directed RNA polymerase I subunit 1 [Ananas comosus]
XP_020114581.1 DNA-directed RNA polymerase I subunit 1
[Ananas comosus]
Length = 1633
Score = 637 bits (1642), Expect = 0.0
Identities = 325/561 (57%), Positives = 411/561 (73%), Gaps = 1/561 (0%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYW-GRESWELEVVIQNNELVCGVIDKAQFGKYG 2720
VIT IL+Y+T+G PF+++ R+ Y G++ EL++ I +NEL+ G+IDKAQFGKYG
Sbjct: 700 VITAILNYVTKGRPPFTLESKARIQKEYLTGKDHPELKLYIHDNELIQGIIDKAQFGKYG 759
Query: 2719 LVHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKE 2540
+VH V+ELYGAD AG LLSVFSRLFT F+Q+HGFTCG DLLL +++ R L K+++
Sbjct: 760 IVHTVYELYGADTAGVLLSVFSRLFTLFLQIHGFTCGVDDLLLSQDSDLQRSRILGKSEK 819
Query: 2539 EGDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSV 2360
++ H +F G ++RS G+S++ LDR+MS ALN +TSEVN +
Sbjct: 820 CSEEVHMRFTGTKGGDRDPVKLQRKVEKVIRSHGDSATITLDRMMSNALNALTSEVNQLL 879
Query: 2359 FPDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSP 2180
FP+GL KPFL+NCLSLMT TGAKGG+VN TQISSLLGQQELEGKRVPRM+SGKTLPCF P
Sbjct: 880 FPNGLEKPFLENCLSLMTATGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPP 939
Query: 2179 WDTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLT 2000
WDT R+GGFI DRFLTGL PQEYYFHCMAGRDGLVDTA+KTSRSGYLQRCLIKNLECL
Sbjct: 940 WDTSSRSGGFIGDRFLTGLHPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLECLK 999
Query: 1999 VFYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDR 1820
V YDHTVRD+DGS++QF YGEDGVDV K+S L F LA N+K++ +L +
Sbjct: 1000 VSYDHTVRDADGSIVQFSYGEDGVDVLKTSFLAKFRELADNRKVIMDRLSSQ-------- 1051
Query: 1819 KLARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSL 1640
L + S S ++P +L++KA ++++ K++ +++++ K + LL+VKY +SL
Sbjct: 1052 -LGDVHLSKSSGFINELPFELRDKASEFVHLSKKKQQCRFEIKR-KDLMKLLKVKYLTSL 1109
Query: 1639 AEPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVM 1460
AEPGE VGVVA QSVGEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS NI TP+M
Sbjct: 1110 AEPGEPVGVVAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDNIRTPIM 1169
Query: 1459 TCRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPE 1280
C + T EDAER+A K RRI AD+IE+M+V +VPF+++ + YKLK+ LY E
Sbjct: 1170 KCPLLASTTLEDAERVAAKLRRISVADIIESMEVQIVPFSIQGSQVSTVYKLKMHLYPSE 1229
Query: 1279 NYPSHSRISLEKCKSIFEEVF 1217
YPS+S + L+ C S F
Sbjct: 1230 LYPSYSDLKLQDCLSTLRSTF 1250
Score = 209 bits (531), Expect = 1e-51
Identities = 105/200 (52%), Positives = 145/200 (72%), Gaps = 1/200 (0%)
Frame = -1
Query: 721 SGRTLTWEYSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDDPPIPALQT 542
+G Y + +LLA IA+K A +YV+S +I++C+V E ++K++ LQ+
Sbjct: 1436 NGLNFEVHYMFRDEPRVLLAEIAQKTAKSIYVKSCKSIERCSVAEPQKKEETH---MLQS 1492
Query: 541 NGINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYGITVDRRH 362
G+NF+AFW L+ LDIN+L++NDI+ +L YGVEAA ATI+ EV+ +F +YGI V+ RH
Sbjct: 1493 VGVNFQAFWDLEEYLDINKLISNDIHAMLNTYGVEAARATIIREVKELFQAYGIDVNIRH 1552
Query: 361 LSLIADFMTFNGGYRPLNRIGI-DSSTSPFLKISFETATKFLVDSCLQGETDYLASPSAR 185
LSLIADFMTFNGGYRP+NR+G+ + +TSPF K++FETA+KF+V S GE D L +PSA
Sbjct: 1553 LSLIADFMTFNGGYRPMNRLGMGEYNTSPFGKMTFETASKFIVGSAFHGEVDTLDAPSAS 1612
Query: 184 IVLGQVAKMGTGCFDILQNL 125
I LGQ K GTGC D++QNL
Sbjct: 1613 ICLGQPVKFGTGCLDLMQNL 1632
>XP_010922210.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Elaeis
guineensis]
Length = 1674
Score = 637 bits (1644), Expect = 0.0
Identities = 331/565 (58%), Positives = 411/565 (72%), Gaps = 1/565 (0%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VIT IL++ITRG PF+++ GR+P Y G++ EL+++I N+L+ G++DKAQFGKYGL
Sbjct: 732 VITAILNHITRGRPPFTVENKGRIPKEYLGKDHNELKLLIYKNDLIHGMVDKAQFGKYGL 791
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH VHELYGAD AG LLSVFSRLFT F+QMHGFTCG DLLL +++ R+ L K++
Sbjct: 792 VHTVHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSDMERKRILEKSEAL 851
Query: 2536 GDKAHAQFLG-KDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSV 2360
+ H +F KD + R++ ES++A LDR+MS ++N +TSEVN ++
Sbjct: 852 SEDVHIRFTAFKDGDRDPVKLQREIEKTLCRNR-ESATASLDRMMSSSMNVLTSEVNQTL 910
Query: 2359 FPDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSP 2180
FP GL+KPFL+NCLSLMT TGAKGG+VN TQISSLLGQQELEGKRVPRM+SGKTLPCF P
Sbjct: 911 FPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPP 970
Query: 2179 WDTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLT 2000
WD RAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCL+KNLECL
Sbjct: 971 WDISCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLVKNLECLK 1030
Query: 1999 VFYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDR 1820
V YDHTVRD+DGSVIQF YGEDGVDV K+S ++ LAANQ ++ +L + D
Sbjct: 1031 VSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDRLSSQ----LEDA 1086
Query: 1819 KLARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSL 1640
L++ N ++P L+E A + + L ++R+ K + L+++KY SSL
Sbjct: 1087 HLSKSNGYLK-----ELPYLLRENATTFARLSKNHQGSLRQIRR-KDLMKLMKLKYLSSL 1140
Query: 1639 AEPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVM 1460
AEPGE VGV+A QSVGEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS +I TPVM
Sbjct: 1141 AEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIRTPVM 1200
Query: 1459 TCRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPE 1280
C + DG+TRE AE+LA K RR+ AD++E+M+V VPF + + YKL++ LY PE
Sbjct: 1201 KCPLHDGRTREAAEQLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMNLYPPE 1260
Query: 1279 NYPSHSRISLEKCKSIFEEVFSKEM 1205
YP HS ++LE C + F M
Sbjct: 1261 LYPPHSDLTLEDCMTTLRTYFIDAM 1285
Score = 220 bits (561), Expect = 3e-55
Identities = 113/201 (56%), Positives = 150/201 (74%), Gaps = 1/201 (0%)
Frame = -1
Query: 718 GRTLTWEYSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDDPPIPALQTN 539
G T Y + ILLA +A+K A VYV+ NI+ C+V E KKD+P +LQT
Sbjct: 1478 GLTFEVHYIFKKEPRILLAEVAQKAAKSVYVKESKNIELCSVPE--PKKDEPL--SLQTA 1533
Query: 538 GINFEAFWKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYGITVDRRHL 359
G+NF+AFW L++ LDIN++ +NDI+ +L YGVEAA ATI+ EV+ VFD+YGI V+ RHL
Sbjct: 1534 GVNFQAFWDLEDHLDINKITSNDIHAMLNTYGVEAARATIIKEVKGVFDAYGIRVNIRHL 1593
Query: 358 SLIADFMTFNGGYRPLNRIGIDS-STSPFLKISFETATKFLVDSCLQGETDYLASPSARI 182
+LIADFMTF+GGYRP+NRIG+++ +TSPF K++FETATKF+V S GE D L +PSA +
Sbjct: 1594 TLIADFMTFHGGYRPMNRIGMNNFNTSPFGKMTFETATKFIVGSAFHGEVDTLDAPSASV 1653
Query: 181 VLGQVAKMGTGCFDILQNLEV 119
LGQ KMGTGCFD++QNL++
Sbjct: 1654 CLGQPVKMGTGCFDLMQNLQL 1674
>AIO05696.1 putative RNA polymerase AI large subunit, partial [Cocos nucifera]
Length = 1669
Score = 636 bits (1640), Expect = 0.0
Identities = 328/564 (58%), Positives = 410/564 (72%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VIT IL++IT+G PF+++ GR+P Y G++ EL+++I N+L+ G+IDKAQFGKYGL
Sbjct: 729 VITAILNHITQGRPPFTVENKGRIPKEYLGKDHNELKLLIYKNDLIHGMIDKAQFGKYGL 788
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH VHELYGAD AG LLSVFSRLFT F+QMHGFTCG DLLL +++ R+ L K++
Sbjct: 789 VHTVHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSDMERKRILEKSEAL 848
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
+ H +F + R++ ES++ LDR+MS ++N +TSEVN ++F
Sbjct: 849 SEDVHIRFTAFKDGDRDPVKLQMEIEVLCRNR-ESATTLLDRMMSSSMNVLTSEVNQTLF 907
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P GL+KPFL+NCLSLMT TGAKGG+VN TQISSLLGQQELEGKRVPRM+SGKTLPCF PW
Sbjct: 908 PSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPRMVSGKTLPCFPPW 967
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D RAGGFISDRFL+GLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCL+KNLECL V
Sbjct: 968 DISCRAGGFISDRFLSGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLVKNLECLKV 1027
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
YDHTVRD+DGSVIQF YGEDGVDV K+S ++ LAANQ ++ +L + D
Sbjct: 1028 SYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDRLSSQ----LEDAH 1083
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
L++ N ++P L+E A + + L ++R+ + + L+++KY SSLA
Sbjct: 1084 LSKSNGYIK-----ELPYLLRENATTFARLSKNHQGSLHQIRR-RDLMKLMKLKYMSSLA 1137
Query: 1636 EPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVMT 1457
EPGE VGV+A QSVGEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS +I TPVM
Sbjct: 1138 EPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIRTPVMK 1197
Query: 1456 CRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPEN 1277
C + DG+TREDAERLA K RR+ AD++E+M+V VPF + + YKL++ LY PE
Sbjct: 1198 CPLHDGRTREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMNLYPPEL 1257
Query: 1276 YPSHSRISLEKCKSIFEEVFSKEM 1205
YP HS ++LE C + F +M
Sbjct: 1258 YPQHSDLTLEDCMTTLRTNFIDDM 1281
Score = 218 bits (556), Expect = 1e-54
Identities = 110/193 (56%), Positives = 146/193 (75%), Gaps = 1/193 (0%)
Frame = -1
Query: 697 YSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDDPPIPALQTNGINFEAF 518
Y E ILLA +A+K A VYV+ NI+ C+V E KKD+P +LQT G+NF+AF
Sbjct: 1481 YIFKEEPRILLAEVAQKTAKSVYVRDSKNIELCSVAE--PKKDEPL--SLQTAGVNFQAF 1536
Query: 517 WKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYGITVDRRHLSLIADFM 338
W L++ LD+N++ +NDI+ +L YGVE A ATI+ EV+ VFD+YGI V+ RHL+LIADFM
Sbjct: 1537 WDLEDHLDVNKITSNDIHAMLNTYGVEVARATIIKEVKGVFDAYGIRVNIRHLTLIADFM 1596
Query: 337 TFNGGYRPLNRIGIDS-STSPFLKISFETATKFLVDSCLQGETDYLASPSARIVLGQVAK 161
TF+GGYRP+NRIG+++ +TSPF K++FETATKF+V S GE D L +PSA + LGQ K
Sbjct: 1597 TFHGGYRPMNRIGMNNFNTSPFGKMTFETATKFIVGSAFHGEVDALDAPSASVCLGQPVK 1656
Query: 160 MGTGCFDILQNLE 122
MGTGCFD++QNL+
Sbjct: 1657 MGTGCFDLMQNLQ 1669
>AAS55442.1 RNA polymerase I largest subunit, partial [Pinus nigra]
Length = 547
Score = 599 bits (1544), Expect = 0.0
Identities = 299/442 (67%), Positives = 358/442 (80%), Gaps = 4/442 (0%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VITT+L YIT+G PF++KK GRVP YWG+ S ELEV+IQNNEL+CGVIDKAQFGKYG+
Sbjct: 106 VITTVLHYITKGRPPFTVKKSGRVPGDYWGKSSGELEVLIQNNELICGVIDKAQFGKYGM 165
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH+V ELYGADAAG LLSVFSRLFT ++QMHGFTCG VDLLL P AE R++KL K+++
Sbjct: 166 VHIVQELYGADAAGHLLSVFSRLFTGYLQMHGFTCGVVDLLLVPQAEDDRKKKLEKSEKL 225
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
GDK H QFLG D +LR+KGE +S+RLDRLMS ALN+ITSEVN S+F
Sbjct: 226 GDKIHLQFLGGDRADIDVMCIEEEIEKVLRTKGEVASSRLDRLMSSALNRITSEVNNSLF 285
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P GL KPF NCLSLMT+TGAKGG+VNFTQISSLLGQQELEGKRVPRM+SGKTLPCF PW
Sbjct: 286 PKGLLKPFPGNCLSLMTMTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFPPW 345
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D++ RAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTA+KTSRSGYLQRCLIKNLECL V
Sbjct: 346 DSRSRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLECLKV 405
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDF---- 1829
+YD+TVRDSDGSVIQF YGEDG+DV K SCLT FE+LA NQKL+ Q+L + ++
Sbjct: 406 YYDYTVRDSDGSVIQFNYGEDGLDVMKISCLTEFEVLATNQKLVRQRLGTNKLDELGSQH 465
Query: 1828 TDRKLARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYN 1649
+ ++ ++ SS + A D+PE L++K ++I LS +++ KL+ KFL+++ +KY
Sbjct: 466 SKKEKFKEKSSVAGSYAKDLPEALEKKVQEFIGGLSKEKRQSLKLKNQNKFLNMMGLKYV 525
Query: 1648 SSLAEPGEAVGVVAGQSVGEPS 1583
SSLA+PGEAVGV+AGQS+GEPS
Sbjct: 526 SSLAQPGEAVGVIAGQSIGEPS 547
>AAS55443.1 RNA polymerase I largest subunit, partial [Cycas revoluta]
Length = 547
Score = 597 bits (1539), Expect = 0.0
Identities = 298/438 (68%), Positives = 348/438 (79%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VIT +L+Y+TRGS PF+MKK GRVP YWG+ S EL+V+IQNNEL+CGV+DKAQFGKYGL
Sbjct: 113 VITALLNYVTRGSPPFTMKKAGRVPGDYWGKSSGELKVIIQNNELICGVLDKAQFGKYGL 172
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH+V ELYGADAAG LLSVFSRLFT ++QMHGFTCG DLLL P AE R +KL KA+
Sbjct: 173 VHIVQELYGADAAGHLLSVFSRLFTGYLQMHGFTCGVADLLLVPQAEDYREKKLGKAEML 232
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
GD H+QF+G D LR KGE +S RLDRLMS ALN++TSEVN +F
Sbjct: 233 GDTVHSQFIGVDGDCIDLEQMEGDIEKHLRGKGEVASNRLDRLMSSALNRVTSEVNNVLF 292
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P GL KPF NCLSLMT+TGAKGG+VNFTQISSLLGQQELEGKRVPRM+SGKTLPCF PW
Sbjct: 293 PKGLLKPFPSNCLSLMTVTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFPPW 352
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D++ RAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTA+KTSRSGYLQRCLIKNLECL V
Sbjct: 353 DSRARAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLECLKV 412
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
YD+TVRDSDGSVIQF YGEDG+DV K+SCLT F++LAANQKL+S++L F + +
Sbjct: 413 HYDYTVRDSDGSVIQFTYGEDGLDVMKTSCLTEFKVLAANQKLVSRRLGGGNFTELNCQY 472
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
+K+S + + +PE + K +I LS K+K KLRK KFL+L+R+KY SSLA
Sbjct: 473 SDKKSSDSYI---KSLPEAFENKLQTFINGLSKKKKRSLKLRKQNKFLNLMRLKYISSLA 529
Query: 1636 EPGEAVGVVAGQSVGEPS 1583
+PGE VGV+AGQS+GEPS
Sbjct: 530 QPGEPVGVIAGQSIGEPS 547
>AAS55436.1 RNA polymerase I largest subunit, partial [Podocarpus macrophyllus]
Length = 550
Score = 595 bits (1535), Expect = 0.0
Identities = 295/438 (67%), Positives = 353/438 (80%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VITT+L++IT+G F+M K G+VP YWGR S EL+V+IQNNELVCGV+DKAQFGKYGL
Sbjct: 113 VITTVLNHITKGRPRFTMNKSGKVPGDYWGRNSGELDVLIQNNELVCGVVDKAQFGKYGL 172
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VHVV EL+GA+ AG LLS+FSRLFT ++QMHGFTCG DLLL P AE R + L K+++
Sbjct: 173 VHVVQELFGANVAGHLLSIFSRLFTGYLQMHGFTCGIADLLLIPQAEDGREKILEKSEKL 232
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
GDK H QFLG D +LR+KG+++SARLDRLMS ALN+ITS+VN S+F
Sbjct: 233 GDKVHLQFLGGDQDRTDLLNLGEDIEKVLRNKGDAASARLDRLMSSALNRITSDVNNSIF 292
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P GL K F NCLSLMT +GAKGG+VNFTQISSLLGQQELEGKRVPRMISGKTLPCF PW
Sbjct: 293 PKGLLKSFPSNCLSLMTTSGAKGGLVNFTQISSLLGQQELEGKRVPRMISGKTLPCFPPW 352
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
DT+ RAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECL V
Sbjct: 353 DTRARAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLKV 412
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
+YD+TVRDSDGS+IQF YGEDGVDV K+SCLT F+ILA NQKL+ Q+L K QF++ +
Sbjct: 413 YYDYTVRDSDGSIIQFHYGEDGVDVMKTSCLTQFDILATNQKLVIQRLGKHQFDELNCKS 472
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
+++ SS S +D+PE L+ KA +I LS +++ + +L P FL+L+R+KY +SLA
Sbjct: 473 SSKERSSISENYTSDLPEALRFKAQDFINNLSKQKRQILELEDPSNFLNLMRLKYVTSLA 532
Query: 1636 EPGEAVGVVAGQSVGEPS 1583
+PGE VGV+AGQS+GEPS
Sbjct: 533 QPGEPVGVIAGQSIGEPS 550
>JAT60449.1 DNA-directed RNA polymerase I subunit rpa1 [Anthurium amnicola]
Length = 1469
Score = 622 bits (1603), Expect = 0.0
Identities = 320/553 (57%), Positives = 395/553 (71%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VIT IL+++TRG PF++ ++P Y G + E E ++ NE V GV+DK QF KYGL
Sbjct: 544 VITAILNHVTRGHSPFTVANTVKIPKEYLGNDRCEFEFLVHENEFVHGVLDKNQFVKYGL 603
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH VHELYG D AG LLS FSRLFT F+QMHGFTCG DLL+ P ++ R+ L ++
Sbjct: 604 VHTVHELYGPDTAGILLSAFSRLFTVFLQMHGFTCGVDDLLIDPRLDVERKRILENCEKR 663
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
+ H +F+ + I+R+ GE + RLD +MS ALN +TSE+N +F
Sbjct: 664 SKEVHCKFILAEDGYRDPRGLQLEIENIIRNNGEPAITRLDHMMSNALNHLTSELNKILF 723
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P GL+K +NCLSLMT TGAKGG+VNFTQISSLLGQQELEGKRVPRM+SGKTLPCF PW
Sbjct: 724 PGGLQKSLPRNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFPPW 783
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D RAGGFI DRFLTGLRPQEYYFHCMAGRDGLVDTA+KTSRSGYLQRCLIKNLE L V
Sbjct: 784 DIASRAGGFIGDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLESLKV 843
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
YDHTVRD DGSVIQF YGEDGVDV ++S L FE L NQ ++ ++L + +R
Sbjct: 844 SYDHTVRDVDGSVIQFLYGEDGVDVHQNSFLMQFEALDINQNVVQERL------NSHNRD 897
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
K S+A V +P KLK +A +++KLS K++ L++ K + L+++KY SSL
Sbjct: 898 ADLKESNAYV---KHLPYKLKREATTFLHKLSKKQRGSLHLKRQKNLMKLVKLKYLSSLV 954
Query: 1636 EPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVMT 1457
+PGE VGV+A QSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRL+EILM A + I TP+M
Sbjct: 955 QPGEPVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILMTAKEKIRTPIMA 1014
Query: 1456 CRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPEN 1277
C V D TRE A+ LA K RRI A+++E+M+V +VPF + + YKL +KLYSP+
Sbjct: 1015 CPVHDFITREAADHLATKMRRITVAEIVESMEVCIVPFCALGREVASVYKLHLKLYSPQQ 1074
Query: 1276 YPSHSRISLEKCK 1238
YP +S +S EKC+
Sbjct: 1075 YPPYSDVSQEKCE 1087
Score = 217 bits (553), Expect = 2e-54
Identities = 110/191 (57%), Positives = 140/191 (73%)
Frame = -1
Query: 697 YSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDDPPIPALQTNGINFEAF 518
+++ SHILLA IA+KVA +V ++ NI++C+V E K K AL+T G+NF AF
Sbjct: 1281 FTINNESHILLAEIAQKVAKRVCIKDSRNIEQCSVTEDKVTKRI----ALETAGVNFRAF 1336
Query: 517 WKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYGITVDRRHLSLIADFM 338
W L+ LDIN + +NDI+ +L YGVEAA + I+ EV+NVFD Y I+VD RHLSLIADFM
Sbjct: 1337 WDLEEYLDINHIRSNDIHAILNTYGVEAARSAIINEVKNVFDYYKISVDIRHLSLIADFM 1396
Query: 337 TFNGGYRPLNRIGIDSSTSPFLKISFETATKFLVDSCLQGETDYLASPSARIVLGQVAKM 158
T NG YRP+NRIG+ STSPF K++FETATKF+V + GE D L SPSA + LGQ KM
Sbjct: 1397 TANGDYRPMNRIGVFHSTSPFSKMTFETATKFIVQAASHGEVDMLESPSASVCLGQPVKM 1456
Query: 157 GTGCFDILQNL 125
GTGCFD++QNL
Sbjct: 1457 GTGCFDLMQNL 1467
>ACJ63314.1 RNA polymerase I large subunit, partial [Illicium parviflorum]
Length = 540
Score = 591 bits (1524), Expect = 0.0
Identities = 294/438 (67%), Positives = 351/438 (80%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VITT+L Y+T+GS+PF+MK+ G+VP YWG+ S EL+V IQNNEL+CGVIDKAQFGK+GL
Sbjct: 111 VITTVLHYVTKGSVPFTMKRAGKVPGDYWGKNSGELKVRIQNNELICGVIDKAQFGKHGL 170
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH+V ELYGAD AG LLSVFSRLFT ++QMHGFTCG DLLL P AE R++KL K++E
Sbjct: 171 VHIVQELYGADVAGHLLSVFSRLFTGYLQMHGFTCGVADLLLVPQAEDDRQKKLEKSEEL 230
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
GD H QF+G + LRSKG+++SARLDRLMS ALN++TSEVN ++F
Sbjct: 231 GDNVHFQFIGANGDQIDLESMEEETEKHLRSKGDAASARLDRLMSSALNRVTSEVNNALF 290
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P GL KPF NCLSLMT+TGAKGG+VNFTQISSLLGQQELEGKRVPR+ISGKTLPCF PW
Sbjct: 291 PKGLLKPFPSNCLSLMTMTGAKGGLVNFTQISSLLGQQELEGKRVPRVISGKTLPCFLPW 350
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D++ RAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTA+KT+RSGYLQRCLIKNLECL V
Sbjct: 351 DSRARAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTTRSGYLQRCLIKNLECLKV 410
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
+YD+TVRDSDGSVIQF YGEDG+DV K+SCLT F++LAAN KL+SQKL K+QF+
Sbjct: 411 YYDYTVRDSDGSVIQFNYGEDGLDVMKTSCLTQFKVLAANNKLVSQKLGKDQFDG----- 465
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
S +S D+PE L+ K +I LS +++ L+K FL+L+R+KY SSLA
Sbjct: 466 ---SKSLSSDSYIKDLPEALENKVQDFISGLSKQKRQSLNLKKRTGFLNLMRLKYMSSLA 522
Query: 1636 EPGEAVGVVAGQSVGEPS 1583
+PGE VGV+AGQS+GEPS
Sbjct: 523 QPGEPVGVIAGQSIGEPS 540
>JAT44689.1 DNA-directed RNA polymerase I subunit RPA190 [Anthurium amnicola]
Length = 1605
Score = 622 bits (1605), Expect = 0.0
Identities = 322/554 (58%), Positives = 396/554 (71%), Gaps = 1/554 (0%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VIT IL+++TRG PF++ ++P Y G + E E ++ NE V GV+DK QF KYGL
Sbjct: 679 VITAILNHVTRGHSPFTVANTVKIPKEYLGNDRCEFEFLVHENEFVHGVLDKNQFVKYGL 738
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH VHELYG D AG LLS FSRLFT F+QMHGFTCG DLL+ P ++ R+ L ++
Sbjct: 739 VHTVHELYGPDTAGILLSAFSRLFTVFLQMHGFTCGVDDLLIDPRLDVERKRILENCEKR 798
Query: 2536 GDKAHAQF-LGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSV 2360
+ H +F L +D I+R+ GE + RLD +MS ALN +TSE+N +
Sbjct: 799 SKEVHCKFILAEDGYRADPRGLQLEIENIIRNNGEPAITRLDHMMSNALNHLTSELNKIL 858
Query: 2359 FPDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSP 2180
FP GL+K +NCLSLMT TGAKGG+VNFTQISSLLGQQELEGKRVPRM+SGKTLPCF P
Sbjct: 859 FPGGLQKSLPRNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFPP 918
Query: 2179 WDTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLT 2000
WD RAGGFI DRFLTGLRPQEYYFHCMAGRDGLVDTA+KTSRSGYLQRCLIKNLE L
Sbjct: 919 WDIASRAGGFIGDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLIKNLESLK 978
Query: 1999 VFYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDR 1820
V YDHTVRD DGSVIQF YGEDGVDV ++S L FE L NQ ++ ++L + +R
Sbjct: 979 VSYDHTVRDVDGSVIQFLYGEDGVDVHQNSFLMQFEALDINQNVVQERL------NSHNR 1032
Query: 1819 KLARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSL 1640
K S+A V +P KLK +A +++KLS K++ L++ K + L+++KY SSL
Sbjct: 1033 DADLKESNAYV---KHLPYKLKREATTFLHKLSKKQRGSLHLKRQKNLMKLVKLKYLSSL 1089
Query: 1639 AEPGEAVGVVAGQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMAASKNILTPVM 1460
+PGE VGV+A QSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRL+EILM A + I TP+M
Sbjct: 1090 VQPGEPVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILMTAKEKIRTPIM 1149
Query: 1459 TCRVKDGKTREDAERLAGKFRRIRFADLIETMDVGVVPFAVKAGVMQNTYKLKIKLYSPE 1280
C V D TRE A+ LA K RRI A+++E+M+V +VPF + + YKL +KLYSP+
Sbjct: 1150 ACPVHDFITREAADHLATKMRRITVAEIVESMEVCIVPFCALGREVASVYKLHLKLYSPQ 1209
Query: 1279 NYPSHSRISLEKCK 1238
YP +S +S EKC+
Sbjct: 1210 QYPPYSDVSQEKCE 1223
Score = 217 bits (553), Expect = 3e-54
Identities = 110/191 (57%), Positives = 140/191 (73%)
Frame = -1
Query: 697 YSVMENSHILLAPIAEKVANKVYVQSVTNIDKCAVIEIKEKKDDPPIPALQTNGINFEAF 518
+++ SHILLA IA+KVA +V ++ NI++C+V E K K AL+T G+NF AF
Sbjct: 1417 FTINNESHILLAEIAQKVAKRVCIKDSRNIEQCSVTEDKVTKRI----ALETAGVNFRAF 1472
Query: 517 WKLDNELDINRLMTNDINKVLEVYGVEAACATIVLEVQNVFDSYGITVDRRHLSLIADFM 338
W L+ LDIN + +NDI+ +L YGVEAA + I+ EV+NVFD Y I+VD RHLSLIADFM
Sbjct: 1473 WDLEEYLDINHIRSNDIHAILNTYGVEAARSAIINEVKNVFDYYKISVDIRHLSLIADFM 1532
Query: 337 TFNGGYRPLNRIGIDSSTSPFLKISFETATKFLVDSCLQGETDYLASPSARIVLGQVAKM 158
T NG YRP+NRIG+ STSPF K++FETATKF+V + GE D L SPSA + LGQ KM
Sbjct: 1533 TANGDYRPMNRIGVFHSTSPFSKMTFETATKFIVQAASHGEVDMLESPSASVCLGQPVKM 1592
Query: 157 GTGCFDILQNL 125
GTGCFD++QNL
Sbjct: 1593 GTGCFDLMQNL 1603
>AAS55445.1 RNA polymerase I largest subunit, partial [Ginkgo biloba]
Length = 542
Score = 588 bits (1517), Expect = 0.0
Identities = 294/438 (67%), Positives = 349/438 (79%)
Frame = -1
Query: 2896 VITTILDYITRGSLPFSMKKLGRVPAIYWGRESWELEVVIQNNELVCGVIDKAQFGKYGL 2717
VITT+L Y+T+GS+PF+MK+ G+VP YWG+ S EL+V IQNNEL+CGVIDKAQFGK+GL
Sbjct: 113 VITTVLHYVTKGSVPFTMKRAGKVPGDYWGKNSGELKVRIQNNELICGVIDKAQFGKHGL 172
Query: 2716 VHVVHELYGADAAGRLLSVFSRLFTCFMQMHGFTCGAVDLLLFPHAEIARREKLAKAKEE 2537
VH+V ELYGAD AG LLSVFSRLFT ++QMHGFTCG DLLL P AE R++KL K++E
Sbjct: 173 VHIVQELYGADVAGHLLSVFSRLFTGYLQMHGFTCGVADLLLVPQAEDDRQKKLEKSEEL 232
Query: 2536 GDKAHAQFLGKDAXXXXXXXXXXXXXXILRSKGESSSARLDRLMSGALNKITSEVNGSVF 2357
GD H QF+G + LRSKG+++SARLDRLMS ALN++TSEVN ++F
Sbjct: 233 GDNVHFQFIGANGDQIDLESMEEETEKHLRSKGDAASARLDRLMSSALNRVTSEVNNALF 292
Query: 2356 PDGLRKPFLKNCLSLMTLTGAKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPW 2177
P GL KPF NCLSLMT+TGAKGG+VNFTQISSLLGQQELEGKRVPRMISGKTLPCF PW
Sbjct: 293 PKGLLKPFPSNCLSLMTMTGAKGGLVNFTQISSLLGQQELEGKRVPRMISGKTLPCFLPW 352
Query: 2176 DTQPRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYLQRCLIKNLECLTV 1997
D++ RAGGFISDRFLTGLRPQEYYF CMA RDGLVDTA+KTSRSGYLQRCLIKNLECL V
Sbjct: 353 DSRARAGGFISDRFLTGLRPQEYYFQCMAARDGLVDTAIKTSRSGYLQRCLIKNLECLKV 412
Query: 1996 FYDHTVRDSDGSVIQFCYGEDGVDVTKSSCLTGFEILAANQKLLSQKLCKEQFNDFTDRK 1817
+YD+TVRDSDGSVIQF YGEDG+DV K+SCLT F++LAAN KL+SQKL K+QF+
Sbjct: 413 YYDYTVRDSDGSVIQFNYGEDGLDVMKTSCLTQFKVLAANNKLVSQKLGKDQFDG----- 467
Query: 1816 LARKNSSASVCDATDIPEKLKEKAHKYIYKLSGKEKHLWKLRKPKKFLDLLRVKYNSSLA 1637
S +S D+PE L+ K +I LS +++ L+K FL+L+R+KY SSLA
Sbjct: 468 ---SKSLSSDSYIKDLPEALENKVQDFINGLSKQKRQSLNLKKRTGFLNLMRLKYMSSLA 524
Query: 1636 EPGEAVGVVAGQSVGEPS 1583
+PGE VGV+AGQS+GEPS
Sbjct: 525 QPGEPVGVIAGQSIGEPS 542