BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00010512
         (1948 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010275189.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   353   e-111
XP_008808794.1 PREDICTED: RNA polymerase sigma factor sigA [Phoe...   351   e-110
XP_006878659.1 PREDICTED: RNA polymerase sigma factor sigA [Ambo...   350   e-110
XP_010266387.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   350   e-110
XP_003534364.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   348   e-109
AKC88635.1 sigma factor [Monsonia marlothii]                          348   e-109
XP_003539986.1 PREDICTED: RNA polymerase sigma factor sigA [Glyc...   347   e-109
ONK58865.1 uncharacterized protein A4U43_C08F530 [Asparagus offi...   347   e-109
AKC88634.1 sigma factor [Monsonia emarginata]                         346   e-108
EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao]                 346   e-108
XP_019454365.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   345   e-108
AKC88633.1 sigma factor [Melianthus villosus]                         345   e-108
XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isofo...   345   e-108
XP_011012457.1 PREDICTED: RNA polymerase sigma factor sigA [Popu...   345   e-108
XP_010550940.1 PREDICTED: RNA polymerase sigma factor sigA [Tare...   345   e-108
KDO48032.1 hypothetical protein CISIN_1g010521mg [Citrus sinensi...   344   e-108
XP_002325882.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Po...   344   e-108
XP_006437403.1 hypothetical protein CICLE_v10031289mg [Citrus cl...   344   e-108
JAT47854.1 RNA polymerase sigma factor rpoD [Anthurium amnicola]...   343   e-107
XP_013442452.1 RNA polymerase sigma factor [Medicago truncatula]...   343   e-107

>XP_010275189.1 PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
            XP_010275190.1 PREDICTED: RNA polymerase sigma factor
            sigA-like [Nelumbo nucifera] XP_010275191.1 PREDICTED:
            RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  353 bits (907), Expect = e-111
 Identities = 199/508 (39%), Positives = 315/508 (62%), Gaps = 13/508 (2%)
 Frame = -3

Query: 1865 AQMSTAAIVGISAGKRLLNTSFTHIEVSKPF---HDQGMSTITTLPRHGIIVCARKVTNA 1695
            + M+TAA++G++AGKRLL+++F + +V+      +D G++   T P   +++ A+K +N 
Sbjct: 9    SSMATAAVIGLNAGKRLLSSTFYYSDVTDRLASVYDHGLAQYQTAPSKSVVI-AKKSSNF 67

Query: 1694 RT--RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIME 1521
                   +H Q +KA ++       +T ++        SD  E+ N  L  SLE+L++++
Sbjct: 68   DHDFASNRHNQSIKALKEHLNTFSTSTEDMWLQT----SDHLEEGNSDLDYSLEALLLLQ 123

Query: 1520 KTMLEKQW----DEYSNDGSEDKEASEVVRSHKP--SARERRLASRRK--STEGCYKGDV 1365
            K++LEKQW    ++    G+  +E  + ++  +   SAR+RR  +R+K  +T+       
Sbjct: 124  KSLLEKQWNLSFEKSMRKGAPKEETRKKIQVTRSGVSARQRRTNTRKKYLNTDSSMMQTT 183

Query: 1364 MNKILRRNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQ 1185
              + L     + +L      + +G  +        +L   EV  LS+KI+ G+ L   + 
Sbjct: 184  RRRHLGSMVSEELLQSRLKGYVKGVISEE------LLTHSEVVQLSKKIKVGISLEEHKM 237

Query: 1184 RLKAKLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGL 1005
            RLK +LG EPS  Q A S+ +S  EL  K++E S+AR+++ MSNVRLV+SIA KY+N+G 
Sbjct: 238  RLKERLGCEPSDEQLATSLRISRAELQMKMIECSLAREKIAMSNVRLVMSIAHKYDNMGA 297

Query: 1004 EIGDLIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQER 825
            E+ DL++ GL GL RGIEKFD SKG   STYVYWWIRQ ++RAL ++S+T +   HM ER
Sbjct: 298  EMADLVQGGLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPSHMHER 357

Query: 824  VYQILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKS 645
            +  I + K  LE +G  P+ +R+A+ LNIS   V+NA +   +V+S+D +A+P  N    
Sbjct: 358  LSLIRNAKIRLEEKGITPSIDRIAECLNISQKKVRNATEAVNKVISLDREAFPSLNGLPG 417

Query: 644  STFQDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWED 465
             T   +IAD+ I++ PW+ ++  +L+++V +LL +TL +RE+ I RLYYGLD E  TWED
Sbjct: 418  ETLHSYIADNRIENNPWHGVDEWSLKDEVNNLLNTTLRERERDIIRLYYGLDEECLTWED 477

Query: 464  ISKQLGLSRERVRQIGIVSMEKLKHTMR 381
            IS+++GLSRERVRQ+G+V++EKLKH  R
Sbjct: 478  ISRRIGLSRERVRQVGLVALEKLKHAAR 505


>XP_008808794.1 PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
            XP_008808795.1 PREDICTED: RNA polymerase sigma factor
            sigA [Phoenix dactylifera] XP_008808796.1 PREDICTED: RNA
            polymerase sigma factor sigA [Phoenix dactylifera]
            XP_008808797.1 PREDICTED: RNA polymerase sigma factor
            sigA [Phoenix dactylifera]
          Length = 508

 Score =  351 bits (901), Expect = e-110
 Identities = 211/509 (41%), Positives = 305/509 (59%), Gaps = 16/509 (3%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPFH---DQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+S GKRLL+TSF   ++++      D G    +T      I  A++ +N  T
Sbjct: 1    MATAAVIGLSTGKRLLSTSFYPADLAEKLFAVPDHGSMQFSTSSTKNTIA-AKRSSNFGT 59

Query: 1688 R--KKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKT 1515
                 +H Q +KA ++       +TA+          D  ED    L+ SLE L++++K+
Sbjct: 60   NIPSNRHSQAIKALKEHVDTAALSTAD----AWFRRPDPLEDGESDLEYSLEVLILLQKS 115

Query: 1514 MLEKQWD------EYSNDGSEDKEASEVVRSHKPSARERRLASRRKSTEGC-----YKGD 1368
            MLEKQW       +  +D  E  + +EV+RS   SAR+RR  +RR+          + G 
Sbjct: 116  MLEKQWKLPFEQIKTVDDPRESCKKTEVIRSGI-SARKRRTVTRRRCFNRSAYMEPFNGG 174

Query: 1367 VMNKILRRNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIR 1188
               K LR      +L      +  G  + +      +L   EV  LS+KI+ GL L   R
Sbjct: 175  EEGKELRSTVSPELLQTRVRGYVRGTVSEN------LLTHAEVVHLSRKIRAGLSLEEKR 228

Query: 1187 QRLKAKLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLG 1008
             +LK KLG+EPS  Q A+ + MS  EL++KL E S+AR++L MSNVRLV+SIA+KY+NLG
Sbjct: 229  MKLKEKLGFEPSDKQLASFLRMSHAELHSKLTECSLAREKLAMSNVRLVMSIAQKYDNLG 288

Query: 1007 LEIGDLIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQE 828
             E+ DLI+ GL GL RGIEKFD SKG   STYVYWWIRQ ++RAL ++S+T +   H+ E
Sbjct: 289  AEMADLIQGGLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPSHLHE 348

Query: 827  RVYQILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGK 648
            R+  I + K  LE +G  P+ + +A++LN+S   VKNA +   +V S+D +A+P  N   
Sbjct: 349  RLSLIRNAKIRLEDKGVMPSIDNIAESLNMSPKKVKNATEAVSKVFSLDREAFPSLNGLP 408

Query: 647  SSTFQDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWE 468
              T   +IAD ++ + PW+  E  +L+++V  LL +TL+KRE+ I RLYYG+  E  TWE
Sbjct: 409  GETLHSYIADKNLANIPWHGFEDWSLKDEVNKLLHATLSKRERAIIRLYYGIGNETHTWE 468

Query: 467  DISKQLGLSRERVRQIGIVSMEKLKHTMR 381
            DIS+Q GLSRERVRQ+G+V++EKLKH  R
Sbjct: 469  DISRQFGLSRERVRQVGLVALEKLKHAAR 497


>XP_006878659.1 PREDICTED: RNA polymerase sigma factor sigA [Amborella trichopoda]
            ERM94804.1 hypothetical protein AMTR_s00011p00266100
            [Amborella trichopoda]
          Length = 497

 Score =  350 bits (897), Expect = e-110
 Identities = 200/503 (39%), Positives = 304/503 (60%), Gaps = 9/503 (1%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSK--PFHDQGMSTITTLPRHGIIVCARKVT-NART 1689
            M+TAA++GIS GKRLL +SF   ++ +  P +D G +    +     IV  +       +
Sbjct: 1    MATAAVIGISTGKRLLRSSFLASDIERVIPIYDFGATQFPAVSHKSFIVSKKSPGFGPNS 60

Query: 1688 RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKTML 1509
               +  QY+ A +           E + +  +S+S    + N   + SLE+L++++K+ML
Sbjct: 61   PSNRQTQYINAIK-----------EHVNAPSSSSSSSTTEANPDFESSLEALILLQKSML 109

Query: 1508 EKQWD------EYSNDGSEDKEASEVVRSHKPSARERRLASRRKSTEGCYKGDVMNKILR 1347
            EKQW+        S D  E+      V S   SAR+RR + RR   +    G V+   +R
Sbjct: 110  EKQWNLSFDQAGTSTDLCEESCKKLGVISSGASARQRRNSLRRPLNQRA--GTVL---VR 164

Query: 1346 RNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLKAKL 1167
            R K+   ++   +  G            ++L   EV  LS KI+ GL L   + RLK KL
Sbjct: 165  RKKQATPIVSPELLQGHFRGYVKGISNDSLLSHAEVVHLSWKIRAGLSLEEHKSRLKEKL 224

Query: 1166 GYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIGDLI 987
            G++PS    A+S+ +S  EL++KL+E S+A+++L MSN+RLV+SIA+KY+N+G+E+ DLI
Sbjct: 225  GFDPSDELLASSLKISRSELHSKLIECSLAKEKLAMSNIRLVMSIAQKYDNMGIEMADLI 284

Query: 986  REGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQILS 807
            + GL GL RGIEKFD SKG+  STYVYWWIRQ ++RA+ ++S+T +   H+ ER+  I +
Sbjct: 285  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRAMVENSRTLRLPTHLHERLSLIRN 344

Query: 806  VKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTFQDF 627
             K  L+ QG  P+  R+AK+LN+S   VKNA +   +V S+D +A+P  N     T   +
Sbjct: 345  AKIRLKEQGLTPSIHRIAKSLNMSKKKVKNATEAMTKVFSLDREAFPTLNGLPGETLHSY 404

Query: 626  IADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISKQLG 447
            IAD+++ + PW+ ++   L+ +V  L+ STL +REQ I RLYYGLD E  TWEDIS+++G
Sbjct: 405  IADNNLMNNPWHGVDEWLLKAEVNKLISSTLAEREQDIIRLYYGLDKECHTWEDISRKIG 464

Query: 446  LSRERVRQIGIVSMEKLKHTMRS 378
            LSRERVRQ+G+V++EKLK+  R+
Sbjct: 465  LSRERVRQVGLVALEKLKNAARN 487


>XP_010266387.1 PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  350 bits (897), Expect = e-110
 Identities = 201/505 (39%), Positives = 316/505 (62%), Gaps = 12/505 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPF---HDQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+SAGKRLLN++F + +V+      +D G++         +I+ ARK +N   
Sbjct: 1    MATAAVIGLSAGKRLLNSTFYYSDVTDRLLSVYDHGLAQYQATSAKNVII-ARKSSNFGD 59

Query: 1688 RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKTML 1509
                + Q++++ R  +  V   +    A V   +S   E+EN  L  S+++L++++K +L
Sbjct: 60   SFPSN-QHIQSIRALKEHVNTLSTPSTADVWLQSSGLLEEENTDLDYSVDALLLLQKFLL 118

Query: 1508 EKQW----DEYSNDGSEDKEASEVVRSHKP--SARERRLASRRKSTEGCYKGDVMNKILR 1347
            EKQW    ++   DG+  +E  + ++  +   SAR+RR ++RR       K  +M    R
Sbjct: 119  EKQWNLSFEQTITDGAPGEETHKKIQVTRSGVSARQRRTSTRRTCLSP--KHSIMQPTKR 176

Query: 1346 RNKRQRV---LLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLK 1176
            +     V   LL S   + +G  +        +L   EV  LS+KI+ GL L   + RLK
Sbjct: 177  KQLGSMVSPELLKSHYGYVKGVISEE------LLTHAEVVQLSKKIKAGLSLEEHKLRLK 230

Query: 1175 AKLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIG 996
             +LG +PS  Q A+S+ +S  EL +K++E S+AR++L MSNVRLV+SIA+KY+N+G E+ 
Sbjct: 231  ERLGCDPSDEQLASSLRISRAELQSKVIECSLAREKLTMSNVRLVMSIAQKYDNMGAEMA 290

Query: 995  DLIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQ 816
            DL++ GL GL RGIEKFD SKG+  STYVYWWIRQ ++RAL ++S+T +   H+ ER+  
Sbjct: 291  DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLCL 350

Query: 815  ILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTF 636
            I + K  L  +G  P+ +R+A+ LN+S   V+NA +   +V S+D +A+P  N     T 
Sbjct: 351  IRNAKIRLAEKGITPSIDRIAECLNMSEKKVRNATEAVNKVFSLDREAFPSLNGLPRETL 410

Query: 635  QDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISK 456
              +IAD+ +++ PW+ ++  +L+++V +LL +TL +RE+ I RLYYGLD E  TWEDIS+
Sbjct: 411  HSYIADNRLENNPWHGVDEWSLKDEVNNLLSTTLEERERDIIRLYYGLDKECLTWEDISR 470

Query: 455  QLGLSRERVRQIGIVSMEKLKHTMR 381
            ++GLSRERVRQ+G+V++EKLKH  R
Sbjct: 471  RIGLSRERVRQVGLVALEKLKHAAR 495


>XP_003534364.1 PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
            XP_006587676.1 PREDICTED: RNA polymerase sigma factor
            sigA-like [Glycine max] KRH39837.1 hypothetical protein
            GLYMA_09G223600 [Glycine max] KRH39838.1 hypothetical
            protein GLYMA_09G223600 [Glycine max]
          Length = 503

 Score =  348 bits (893), Expect = e-109
 Identities = 202/508 (39%), Positives = 309/508 (60%), Gaps = 15/508 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPFH---DQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+S GKRLL++S+ + +V +      D G +    +P   +I   +      T
Sbjct: 1    MATAAVIGLSGGKRLLSSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTPT 60

Query: 1688 --RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKT 1515
                 +  Q +KA ++     P        S     S+  E E+  +  S+E+L++++K+
Sbjct: 61   FPASNQQNQSIKALKEHVDDAPTIADSWFQSCN---SNDLEVESSEMGYSVEALLLLQKS 117

Query: 1514 MLEKQWD---------EYSNDGSEDKEASEVVRSHKPSARERRLASRRKST-EGCYKGDV 1365
            MLEKQW+         E+S+ G + K+ +  V     SAR+RR+ ++RK+  + C    +
Sbjct: 118  MLEKQWNLSFEREVLTEHSSKGKKCKKVA--VTCSGVSARQRRMNTKRKTAIKTCGAMQL 175

Query: 1364 MNKILRRNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQ 1185
             +KI        +L H    + +G  +        +L   EV  LS++I+ GL L   + 
Sbjct: 176  KSKI-----SPELLQHRLKGYVKGIVSEE------LLSHAEVVNLSERIKVGLSLEEHKS 224

Query: 1184 RLKAKLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGL 1005
            RLK +LG EPS  Q A S+ +S  EL A+++E ++AR++L MSNVRLV+SIA+KY+NLG 
Sbjct: 225  RLKERLGCEPSDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGA 284

Query: 1004 EIGDLIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQER 825
            E+GDL++ GL GL RGIEKFD SKG+  STYVYWWIRQ ++RAL ++S+T +   H+ ER
Sbjct: 285  EMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHER 344

Query: 824  VYQILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKS 645
            +  I + K  LE +G  PT +R+AK LN+S   V+NA +   + +S+D +A+P  N  + 
Sbjct: 345  LSLIRNAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKTISLDREAFPSLNGIQG 404

Query: 644  STFQDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWED 465
             T   +IADD +++ PW  ++  AL+++V  L+  TL +RE+ I RLYYGLD E  TWED
Sbjct: 405  ETHHSYIADDRVENIPWNGVDEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWED 464

Query: 464  ISKQLGLSRERVRQIGIVSMEKLKHTMR 381
            ISK++GLSRERVRQ+G+V++EKLKH  R
Sbjct: 465  ISKRIGLSRERVRQVGLVALEKLKHAAR 492


>AKC88635.1 sigma factor [Monsonia marlothii]
          Length = 500

 Score =  348 bits (892), Expect = e-109
 Identities = 202/502 (40%), Positives = 310/502 (61%), Gaps = 9/502 (1%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPFH---DQGMSTITTLPRHGIIVCARKVTN--- 1698
            MSTAA++G+SAGKRLL TSF   +VS  F    D  +S     P   +I  A+K +N   
Sbjct: 2    MSTAAVIGLSAGKRLLTTSFFCYDVSDKFSVVSDHVLSNYQHAPAMSVIT-AKKSSNYGP 60

Query: 1697 ARTRKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEK 1518
            +     +H+  + A ++    V   +    A      S++ EDEN  ++ S+E+L++++K
Sbjct: 61   SFPSSNRHKHTVNALKECLDTVSIPST---AEQWPQTSEELEDENSEMEYSVEALLLLQK 117

Query: 1517 TMLEKQWDEYSNDGSEDKEASEVVRSHKPSARERRLASRRKSTEGCYKGDVMNKILRRNK 1338
            +MLEKQW+  S +    K+ S V      SAR+RR++S+RK T    K   +++I+   +
Sbjct: 118  SMLEKQWN-LSTEQKTRKKVSVVCSG--TSARQRRISSKRKVTG---KSGSLSQIVTSEQ 171

Query: 1337 RQRVL---LHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLKAKL 1167
             + ++   +  + F G G    S ++    L   EV  LS+KI+ GL + + R RL+ +L
Sbjct: 172  LKAIINPEIIQNRFQGYGKGTVSNQR----LSHAEVVRLSKKIKVGLSIAKHRLRLQERL 227

Query: 1166 GYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIGDLI 987
            G EPS  Q A S+ +S VEL  KL+E SMAR++L MSN+RLV+SIA+KYEN+G ++ DL+
Sbjct: 228  GNEPSDKQLAMSLKISTVELQIKLLESSMAREKLAMSNIRLVISIAKKYENMGGDMDDLV 287

Query: 986  REGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQILS 807
            + GL GL RGIE+FD +KG   STYVYWWIRQ +++AL ++S T +   H+ ER+  I  
Sbjct: 288  QGGLIGLMRGIERFDSTKGCRLSTYVYWWIRQGVSKALIENSTTMKLPSHLYERLNLIRE 347

Query: 806  VKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTFQDF 627
               +L+ QG  P+ E +AK LN++   VKN     K+++S+D +A+P  N     T  ++
Sbjct: 348  ATTKLQEQGITPSVENIAKCLNMTEKKVKNGTMAMKKIISLDREAFPSLNGLPGDTMHNY 407

Query: 626  IADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISKQLG 447
             AD   +  PW+A++  AL+E++  ++   L +RE+ I  LYYGL+ E+ TWE+ISK++G
Sbjct: 408  FADPRPEHDPWHAVQKWALKEEINKIINIALGEREREIIILYYGLNGESLTWEEISKRIG 467

Query: 446  LSRERVRQIGIVSMEKLKHTMR 381
            LSRERVRQ+G+V++EKLKH  R
Sbjct: 468  LSRERVRQVGLVALEKLKHIAR 489


>XP_003539986.1 PREDICTED: RNA polymerase sigma factor sigA [Glycine max] KHN46496.1
            RNA polymerase sigma factor rpoD [Glycine soja]
            KRH23963.1 hypothetical protein GLYMA_12G013300 [Glycine
            max]
          Length = 503

 Score =  347 bits (891), Expect = e-109
 Identities = 202/506 (39%), Positives = 310/506 (61%), Gaps = 13/506 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPFH---DQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+S GKRLL++S+ + ++ +      D G +    +P   +IV  +      T
Sbjct: 1    MATAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVPTKSLIVAKKSSNYTPT 60

Query: 1688 --RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKT 1515
                 +  Q +KA ++     P        S     S+  E E+  +  S+E+L++++K+
Sbjct: 61   FPASNQQNQSIKALKEHVDDAPTIADPWFQSYN---SNDLEVESSEMGYSVEALLLLQKS 117

Query: 1514 MLEKQW------DEYSNDGSEDKEASEV-VRSHKPSARERRLASRRKST-EGCYKGDVMN 1359
            MLEKQW      +  + + S+ K+  +V V     SAR+RR+ ++RK+  + C    + +
Sbjct: 118  MLEKQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRKTAIKTCGAMQLKS 177

Query: 1358 KILRRNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRL 1179
            KI        +L H    + +G  +        +L   EV  LS+KI+ GL L   + RL
Sbjct: 178  KI-----SPELLQHRLKGYVKGLVSEE------LLSHAEVVNLSEKIKVGLSLEEHKSRL 226

Query: 1178 KAKLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEI 999
            K KLG EPS  Q A S+ +S  EL A+++E S+AR++L MSNVRLV+SIA+KY+NLG E+
Sbjct: 227  KEKLGCEPSDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEM 286

Query: 998  GDLIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVY 819
            GDL++ GL GL RGIEKFD SKG+  STYVYWWIRQ ++RAL ++S+T +   H+ ER+ 
Sbjct: 287  GDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLS 346

Query: 818  QILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSST 639
             I + K  LE +G  PT +R+AK LN+S   V+NA +   +++S+D +A+P  N  +  T
Sbjct: 347  LIRNAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKIISLDREAFPSLNGLQGET 406

Query: 638  FQDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDIS 459
               +IAD+ +++ PW  ++  AL+++V  L+  TL +RE+ I RLYYGL+ E  TWEDIS
Sbjct: 407  HHSYIADNRVENIPWNGVDEWALKDEVNRLINVTLVEREREIIRLYYGLEKECLTWEDIS 466

Query: 458  KQLGLSRERVRQIGIVSMEKLKHTMR 381
            K++GLSRERVRQ+G+V++EKLKH  R
Sbjct: 467  KRIGLSRERVRQVGLVALEKLKHAAR 492


>ONK58865.1 uncharacterized protein A4U43_C08F530 [Asparagus officinalis]
          Length = 521

 Score =  347 bits (890), Expect = e-109
 Identities = 209/522 (40%), Positives = 310/522 (59%), Gaps = 29/522 (5%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPFHDQGMSTITTLPRHGIIVCARKV-TNARTRK 1683
            M+TAA++G++AGKR+L+++F   E +  F D G    +      II+  R    N     
Sbjct: 2    MATAAVIGLNAGKRILSSTFYSSEFT--FIDHGSPQFSAPTSKSIIIARRSSHPNTSVPS 59

Query: 1682 KKHRQYLKASRDFEGLV-PCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKTMLE 1506
            ++H   +KA ++    + P AT +    +E     +EED +  ++ SLE  ++++K+MLE
Sbjct: 60   ERHSVSIKAVKEHTDTISPIATDDWSDLIE-----EEEDGDSDIKSSLEVFLLLQKSMLE 114

Query: 1505 KQWDEYSNDGS------EDKEASEVVRSHKPSARERRLASRRKS-TEGCYKGDVMNKILR 1347
            KQW    N  S      E    +EV+RS   SAR+RR ++R KS  +  Y G     I+ 
Sbjct: 115  KQWKLSFNQMSTATAPGETCRKTEVIRSGI-SARKRRTSTRTKSINQSSYVG-----IME 168

Query: 1346 RNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLKAKL 1167
              K+ R  +   +   +         +  +L   EV  LS+KI+ GL L   R ++K KL
Sbjct: 169  EGKQLRAAVSPELLQAKLTGYVRGTVSEDLLTHSEVVHLSKKIKAGLSLEDHRAKMKGKL 228

Query: 1166 GYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIGD-- 993
            G+EPS  Q A+S+ MS  EL +KL E S+AR++L MSN+RLV+SIA+KY+NLG E+ D  
Sbjct: 229  GFEPSDKQLASSLRMSHSELRSKLTECSLAREKLAMSNIRLVMSIAQKYDNLGAEMADNE 288

Query: 992  ------------------LIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALAD 867
                              LI+ GL GL RGIEKFD SKG+  STYVYWWIRQ ++R LA+
Sbjct: 289  QYSTFAQKYDNLGAEMADLIQGGLIGLVRGIEKFDSSKGFRISTYVYWWIRQGVSRTLAE 348

Query: 866  HSKTTQGAGHMQERVYQILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVS 687
            +S+T +   H+ ER+  I + K  LE +G  P+ +++AK L IS   V+NA +   +V+S
Sbjct: 349  NSRTLRLPLHLHERLSSIRNAKIRLEERGITPSVDKLAKCLKISEKKVRNATEAVSKVLS 408

Query: 686  MDMQAYPKSNLGKSSTFQDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITR 507
            +D +A+P  N   S T   +IAD+++++ PW+  E  +L+++V  LL +TL +RE+ I R
Sbjct: 409  LDREAFPSLNGLPSETLHSYIADNNVENIPWHGFEEWSLKDEVNKLLCATLGEREREIIR 468

Query: 506  LYYGLDTENQTWEDISKQLGLSRERVRQIGIVSMEKLKHTMR 381
            LYYG+D E  TWEDIS+Q GLSRERVRQ+G+V++EKLKH  R
Sbjct: 469  LYYGIDNECHTWEDISRQFGLSRERVRQVGLVALEKLKHAAR 510


>AKC88634.1 sigma factor [Monsonia emarginata]
          Length = 499

 Score =  346 bits (887), Expect = e-108
 Identities = 200/502 (39%), Positives = 313/502 (62%), Gaps = 9/502 (1%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPFH---DQGMSTITTLPRHGIIVCARKVTN--- 1698
            MST A++G+SAGKRLL TSF   +V+  F    D  +S     P   +I  A+K +N   
Sbjct: 1    MSTTAVIGLSAGKRLLTTSFFCYDVNDKFSVVSDHVLSNYQHAPAMSVIT-AKKSSNYGP 59

Query: 1697 ARTRKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEK 1518
            +     +H+Q + A ++    V   +    A      S++ EDEN  ++ S+E+L++++K
Sbjct: 60   SFPSSNRHKQSVNALKECLDTVSIPST---AEQWPQTSEEIEDENSEMEYSVEALLLLQK 116

Query: 1517 TMLEKQWDEYSNDGSEDKEASEVVRSHKPSARERRLASRRKSTEGCYKGDVMNKILRRNK 1338
            +MLEKQW+   + G + ++   VV S   SAR+RR++S+RK T    K   +++I+  ++
Sbjct: 117  SMLEKQWN--LSTGQKTRKKVSVVCSGT-SARQRRISSKRKVTG---KSGSLSQIVT-SE 169

Query: 1337 RQRVLLHSSV---FHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLKAKL 1167
            + + +++  +   F G G    S ++    L  E+V  LS+KIQ GL + + R RL+ +L
Sbjct: 170  QLKAIINPEIRNRFQGYGKGTVSNQR----LSHEDVVRLSKKIQVGLSIDKHRLRLEERL 225

Query: 1166 GYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIGDLI 987
            G+EPS  Q A  + +S VEL  KL+E SMAR++L  SN+RLV+SIA+KYEN+G ++ DL+
Sbjct: 226  GHEPSDKQLAMYLKISTVELQIKLLESSMAREKLATSNIRLVISIAKKYENMGGDMDDLV 285

Query: 986  REGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQILS 807
            + GL GL  GIE+FD +KG   STYVYWWIRQ +++AL ++S T +   H+ ER+  I  
Sbjct: 286  QGGLIGLMHGIERFDSTKGCRLSTYVYWWIRQGVSKALNENSTTMKLPSHLYERLNLIRE 345

Query: 806  VKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTFQDF 627
               +L+ QG  P+ + +AK LN++   VKN     K+++S+D +A+P  N     T  ++
Sbjct: 346  ATAKLQEQGITPSVKNIAKCLNMTEKKVKNGTMAMKKIISLDREAFPSLNGIPGDTMHNY 405

Query: 626  IADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISKQLG 447
             AD   +  PWYA++  AL+E++  +L   L +RE+ I  LYYGL+ E+ TWE+ISK++G
Sbjct: 406  FADPRPEHDPWYAVQKWALKEEINKILNIALGEREREIIILYYGLNGESLTWEEISKRMG 465

Query: 446  LSRERVRQIGIVSMEKLKHTMR 381
            LSRERVRQ+G+V++EKLKH  R
Sbjct: 466  LSRERVRQVGLVALEKLKHAAR 487


>EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  346 bits (887), Expect = e-108
 Identities = 204/504 (40%), Positives = 306/504 (60%), Gaps = 11/504 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPF---HDQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G++ GKRLL++SF++ ++ +     +D G S   T     +IV A+K +N   
Sbjct: 2    MATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIV-AKKSSNCSQ 60

Query: 1688 RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKTML 1509
                  +  ++ +  +  V  A+    A      S+  E E+  L  S+E+L++++K+ML
Sbjct: 61   SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSML 120

Query: 1508 EKQWDEYSNDGSEDKEASEVVRSHKP------SARERRLASRRKSTEGCYKGDVMNK-IL 1350
            EKQW          +  S  +    P      SAR+RR  ++RK         + NK I+
Sbjct: 121  EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKIL-------IQNKSII 173

Query: 1349 RRNKRQ-RVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLKA 1173
            + N +Q R L+   +             +  +L   EV  LS+KI+ GL L   R RLK 
Sbjct: 174  QPNAKQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKE 233

Query: 1172 KLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIGD 993
            +LG EPS  Q A S+ +S  EL +KL+E S+AR++L MSNVRLV+SIA++Y+N+G E+ D
Sbjct: 234  RLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSD 293

Query: 992  LIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQI 813
            LI+ GL GL RGIEKFD SKGY  STYVYWWIRQ ++RAL ++S+T +   H+ ER+  I
Sbjct: 294  LIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 353

Query: 812  LSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTFQ 633
             + K  LE +G  PT +R+A++LN+S   V+NA +   +V S+D  A+P  N     T  
Sbjct: 354  RNAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHH 413

Query: 632  DFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISKQ 453
             +IAD+ +++ PW+ ++  AL+++V  L+  TL +RE+ I RLYYGLD E+ TWEDISK+
Sbjct: 414  SYIADNHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKR 473

Query: 452  LGLSRERVRQIGIVSMEKLKHTMR 381
            +GLSRERVRQ+G+V++EKLKH  R
Sbjct: 474  IGLSRERVRQVGLVALEKLKHAAR 497


>XP_019454365.1 PREDICTED: RNA polymerase sigma factor sigA-like [Lupinus
            angustifolius] XP_019454366.1 PREDICTED: RNA polymerase
            sigma factor sigA-like [Lupinus angustifolius] OIW05565.1
            hypothetical protein TanjilG_23351 [Lupinus
            angustifolius]
          Length = 500

 Score =  345 bits (885), Expect = e-108
 Identities = 201/507 (39%), Positives = 301/507 (59%), Gaps = 14/507 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPFH---DQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+S GKRLL++S+ + ++++      D G +     P   +I+  +      T
Sbjct: 1    MATAAVIGLSGGKRLLSSSYHYSDITEKLFYGSDFGFTHYQIAPTKYVIISKKSSNYTPT 60

Query: 1688 ----RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIME 1521
                 K+K  Q +KA ++     P    +     +    D  E E   +  S+++L++++
Sbjct: 61   FPSCNKEKEIQSIKALKEHVDAAPTIADQWFEGYDNC--DVLEVEGSDMDNSMDALLLLQ 118

Query: 1520 KTMLEKQWDEYSNDG-------SEDKEASEVVRSHKPSARERRLASRRKSTEGCYKGDVM 1362
            K+MLEKQW+     G        E     + V     SAR+RR++++RK T G     ++
Sbjct: 119  KSMLEKQWNLSFQRGVLRKKSKREKSRRKDTVTCSGVSARQRRMSTKRK-TPGMQLRSII 177

Query: 1361 NKILRRNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQR 1182
            +  L +N+ +  +    V   E            +L   EV  LSQKI+ GL L   + R
Sbjct: 178  SPELLQNRLKGYV--KGVLSEE------------LLSHAEVVNLSQKIKVGLSLDEHKCR 223

Query: 1181 LKAKLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLE 1002
            LK +LG EPS  Q A S+ +S  EL A+++E S+AR+ L MSNVRLV+SIA++Y+NLG E
Sbjct: 224  LKERLGCEPSDDQIATSLKISCAELRARMIECSLARERLTMSNVRLVMSIAQRYDNLGAE 283

Query: 1001 IGDLIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERV 822
            + DL++ GL GL RGIEKFD SKG+  STYVYWWIRQ ++RAL ++S+T +   H+ ER+
Sbjct: 284  MADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL 343

Query: 821  YQILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSS 642
              I + K  LE +G  PT ER+AK+LN+S   VKNA +   +V+S+D +A+P  N     
Sbjct: 344  SLIRNAKLRLEEKGITPTIERIAKSLNMSQKKVKNATEAINKVISLDREAFPSLNGLPGE 403

Query: 641  TFQDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDI 462
            T   +IAD   ++ PW  ++  AL+++V  L+  TL +RE+ I R YYGLD E  TWEDI
Sbjct: 404  THHSYIADSRHENIPWNGVDEWALKDEVNKLINVTLVEREREIIRFYYGLDKECLTWEDI 463

Query: 461  SKQLGLSRERVRQIGIVSMEKLKHTMR 381
            SK++GLSRERVRQ+G+V++EKLKH  R
Sbjct: 464  SKRIGLSRERVRQVGLVALEKLKHAAR 490


>AKC88633.1 sigma factor [Melianthus villosus]
          Length = 506

 Score =  345 bits (885), Expect = e-108
 Identities = 197/502 (39%), Positives = 307/502 (61%), Gaps = 9/502 (1%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPF---HDQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+SAGKRLL++S  + + ++     +D G    T       +V A+K +N   
Sbjct: 1    MATAAVIGLSAGKRLLSSSLYYSDYAEKLSYANDHGHYNATPTKT---VVIAKKSSNCSP 57

Query: 1688 RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKTML 1509
            R     +  ++ +  +  V   +    A      S+  +++N  ++ S+E+L++++K+ML
Sbjct: 58   RFPSSNRKTQSIKALKEHVDDISGPSTAESWFQRSNDVDEQNFDIEYSVEALLLLQKSML 117

Query: 1508 EKQWD-----EYSNDGSEDKEASEV-VRSHKPSARERRLASRRKSTEGCYKGDVMNKILR 1347
            EKQW+         D  ++K    + V     SAR+RR++++RK      +   M +  R
Sbjct: 118  EKQWNLSFDKTMLTDLVKEKTCKRIPVTCSGVSARQRRMSNKRKILS---ENSSMMQTSR 174

Query: 1346 RNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLKAKL 1167
             N R R ++   +             +  +L   EV  LS+KI+CGL L   + RLK +L
Sbjct: 175  CN-RLRTIIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKKIKCGLSLEEHKLRLKKRL 233

Query: 1166 GYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIGDLI 987
            G EPS  Q A S+ +S  EL +K +E  +AR++L MSNVRLV+SIA++Y+N+G E+ DL+
Sbjct: 234  GCEPSDEQLATSLRISRAELRSKWIESGLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLV 293

Query: 986  REGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQILS 807
            + GL GL RGIEKFD +KG+  STYVYWWIRQ ++RAL ++S+T +   H+ ER+  I +
Sbjct: 294  QGGLIGLLRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENSRTLRLPTHLHERLGLIRN 353

Query: 806  VKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTFQDF 627
             K  LE +G  P+ ER+A+ LN+S   ++NA +   +V S+D +A+P  N     T   +
Sbjct: 354  AKIRLEEKGITPSIERLAECLNMSKKKIRNATEAISKVFSLDREAFPSLNGLPGETHHSY 413

Query: 626  IADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISKQLG 447
            IAD+ +D+ PW+ ++  AL+++VK L+E TL +RE+ I RLY+GLD E  TWEDISK++G
Sbjct: 414  IADNCLDNNPWHGVDEWALKDEVKKLIEMTLGEREREIIRLYHGLDNECLTWEDISKRIG 473

Query: 446  LSRERVRQIGIVSMEKLKHTMR 381
            LSRERVRQ+G+V+MEKLKH  R
Sbjct: 474  LSRERVRQVGLVAMEKLKHAAR 495


>XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Theobroma
            cacao]
          Length = 508

 Score =  345 bits (885), Expect = e-108
 Identities = 204/504 (40%), Positives = 305/504 (60%), Gaps = 11/504 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPF---HDQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G++ GKRLL++SF++ ++ +     +D G S   T     +IV A+K +N   
Sbjct: 2    MATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIV-AKKSSNCSQ 60

Query: 1688 RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKTML 1509
                  +  ++ +  +  V  A+    A      S+  E E+  L  S+E+L++++K+ML
Sbjct: 61   SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNHLEVESYDLDYSVEALLLLQKSML 120

Query: 1508 EKQWDEYSNDGSEDKEASEVVRSHKP------SARERRLASRRKSTEGCYKGDVMNK-IL 1350
            EKQW          +  S  +    P      SAR+RR  ++RK           NK I+
Sbjct: 121  EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILS-------QNKSII 173

Query: 1349 RRNKRQ-RVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLKA 1173
            + N +Q R L+   +             +  +L   EV  LS+KI+ GL L   R RLK 
Sbjct: 174  QPNAKQLRSLISPELLQSRLKGYVKGVVSEELLSHAEVVRLSKKIKAGLSLEEHRLRLKE 233

Query: 1172 KLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIGD 993
            +LG EPS  Q A S+ +S  EL +KL+E S+AR++L MSNVRLV+SIA++Y+N+G E+ D
Sbjct: 234  RLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSD 293

Query: 992  LIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQI 813
            LI+ GL GL RGIEKFD SKGY  STYVYWWIRQ ++RAL ++S+T +   H+ ER+  I
Sbjct: 294  LIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 353

Query: 812  LSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTFQ 633
             + K  LE +G  PT +R+A++LN+S   V+NA +   +V S+D  A+P  N     T  
Sbjct: 354  RNAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHH 413

Query: 632  DFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISKQ 453
             +IAD+ +++ PW+ ++  AL+++V  L+  TL +RE+ I RLYYGLD E+ TWEDISK+
Sbjct: 414  SYIADNHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKR 473

Query: 452  LGLSRERVRQIGIVSMEKLKHTMR 381
            +GLSRERVRQ+G+V++EKLKH  R
Sbjct: 474  IGLSRERVRQVGLVALEKLKHAAR 497


>XP_011012457.1 PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
            XP_011012458.1 PREDICTED: RNA polymerase sigma factor
            sigA [Populus euphratica]
          Length = 509

 Score =  345 bits (884), Expect = e-108
 Identities = 199/505 (39%), Positives = 310/505 (61%), Gaps = 12/505 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPF---HDQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+S GKRLL++SF + ++++     +D G++   T     ++V A+K +N   
Sbjct: 2    MATAAVIGLSTGKRLLSSSFYYSDLTEKLSSVNDHGITYCPTATTKNVVV-AKKSSNYGP 60

Query: 1688 RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKTML 1509
                  +   + +  +  V  A+A    +      D  E+E+  L  S+E+L++++K+ML
Sbjct: 61   NFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 1508 EKQWD-----EYSNDGSEDKEASEV-VRSHKPSARERRLASRRKSTEGCYKGDVMNKILR 1347
            EKQW+       S+D +  K   ++ V     SAR+RR+ +RRK+          +K + 
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQN-------QSKFMS 173

Query: 1346 RN---KRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLK 1176
            ++   K  R ++   +             +  VL   EV  LS+ I+ GL     + RLK
Sbjct: 174  QSSDFKFLRSVISPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLK 233

Query: 1175 AKLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIG 996
             +LG EPS  Q A S+ +S  +L AKL++ S+AR++L MSNVRLV+SIA+KY+N+G E+ 
Sbjct: 234  ERLGCEPSDEQIADSLRISRADLQAKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMA 293

Query: 995  DLIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQ 816
            DL++ GL GL RGIEKFD SKG+  STYVYWWIRQ ++RAL D+S+T +   H+ ER+  
Sbjct: 294  DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGL 353

Query: 815  ILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTF 636
            I + K  LE +G  P+ +R+A++LN+S   V+NA +   +V S+D +A+P  N     T 
Sbjct: 354  IRNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETH 413

Query: 635  QDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISK 456
              +IAD+  ++ PW+ ++  AL+E+V  L++STL +RE+ I RLY+GLD E  TWEDISK
Sbjct: 414  HSYIADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISK 473

Query: 455  QLGLSRERVRQIGIVSMEKLKHTMR 381
            ++GLSRERVRQ+G+V++EKLKH  R
Sbjct: 474  RMGLSRERVRQVGLVALEKLKHAAR 498


>XP_010550940.1 PREDICTED: RNA polymerase sigma factor sigA [Tarenaya hassleriana]
          Length = 512

 Score =  345 bits (884), Expect = e-108
 Identities = 206/507 (40%), Positives = 315/507 (62%), Gaps = 14/507 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPF---HDQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+SAGKRLL++SF H +V++ F   +DQ  +    +P    ++ ++K ++  +
Sbjct: 2    MATAAVIGLSAGKRLLSSSFCHSDVTEKFLYGNDQS-AVQYQIPHTKTVIISKKPSSNYS 60

Query: 1688 RK---KKHR-QYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIME 1521
                   HR Q  KA ++  G+   A +     ++   +D+ E+E+  L   +E+L++++
Sbjct: 61   PSLPSSTHRTQSAKAVKETLGVASSAPSSGQLWLQ-GYNDELEEESYDLD--VEALLLLQ 117

Query: 1520 KTMLEKQWD-----EYSNDGSEDKEASEV-VRSHKPSARERRLASRRKSTEGCYKGDVMN 1359
            K+MLEKQW+       S+D S  K   ++ V     SAR+RR+ +++K+     K     
Sbjct: 118  KSMLEKQWNLSFEKTISSDLSTKKTRKKISVTCSGISARQRRINAKKKNAMSQNKAV--- 174

Query: 1358 KILRRNKRQRVLLHSSVFHGEGANNSSRKQ-TYTVLKREEVTWLSQKIQCGLHLHRIRQR 1182
              +   K+QR++ +S +          +   +  VL   EV  LS+KI+ GL L   + R
Sbjct: 175  SHVSATKQQRIITNSELLRQNRVKGYVKGVISDAVLSHAEVVCLSKKIKSGLLLDEHKSR 234

Query: 1181 LKAKLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLE 1002
            LK +LG EPS  Q A S+ +S  EL  +LME  +AR++L MSNVRLV+SIA++Y+N+G E
Sbjct: 235  LKERLGCEPSDDQLAMSLKISRAELQTRLMECHLAREKLAMSNVRLVMSIAQRYDNMGAE 294

Query: 1001 IGDLIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERV 822
            + DL++ GL GL RGIEKFD SKG+  STYVYWWIRQ ++RAL ++S+T +   H+ ER+
Sbjct: 295  MSDLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL 354

Query: 821  YQILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSS 642
              I + K  LE +G  P+ ER+AK+LN+S   VKNA +   +V S+D  A+P  N     
Sbjct: 355  GLIRNAKLRLEEKGITPSIERIAKSLNMSQKKVKNATEAVSKVFSLDRDAFPSLNGLPGE 414

Query: 641  TFQDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDI 462
            T   +IAD+ +++ PW+  +  AL+ +V  LL + L  RE+ I RLYYGLD E+ TWEDI
Sbjct: 415  THHSYIADNRLENNPWHGYDEWALKNEVNKLLNAILGDREREIVRLYYGLDRESLTWEDI 474

Query: 461  SKQLGLSRERVRQIGIVSMEKLKHTMR 381
            SK++GLSRERVRQ+G+V++EKLKH  R
Sbjct: 475  SKRIGLSRERVRQVGLVALEKLKHAAR 501


>KDO48032.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis] KDO48033.1
            hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  344 bits (883), Expect = e-108
 Identities = 209/508 (41%), Positives = 313/508 (61%), Gaps = 15/508 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPF---HDQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+SAGKRLL++SF + ++S+ F   +D G S  + +     +V A+K +N   
Sbjct: 2    MATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLG-SANSQVGSTKNVVAAKKSSNYNP 60

Query: 1688 R---KKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEK 1518
                  +  Q +KA ++       +TAE  A    S     E+E+  L  S+E+L++++K
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSI----EEESSELDYSVEALLLLQK 116

Query: 1517 TMLEKQWD-----EYSNDGSEDKEASEV-VRSHKPSARERRLASRRKSTEGCYKGDVMNK 1356
            +MLEKQW+         D    K   +V V     SAR+RRL S++K           NK
Sbjct: 117  SMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILS-------QNK 169

Query: 1355 -ILRRN--KRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQ 1185
             IL++N  K+ R ++   +             +  +L   EV  LS+KI+ GL L   + 
Sbjct: 170  SILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKL 229

Query: 1184 RLKAKLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGL 1005
            RLK +LG EPS  Q AAS+ +S  EL + LME S+AR++L MSNVRLV+SIA++Y+N+G 
Sbjct: 230  RLKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGA 289

Query: 1004 EIGDLIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQER 825
            ++ DL++ GL GL RGIEKFD SKG+  STYVYWWIRQ ++RAL ++S+T +   H+ ER
Sbjct: 290  DMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHER 349

Query: 824  VYQILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKS 645
            +  I + K  LE +G  P+ +R+A+ LN+S   V+NA +   +V S+D +A+P  N    
Sbjct: 350  LGLIRNAKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPG 409

Query: 644  STFQDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWED 465
             T   +IAD+ +++ PW+ ++  AL+++V  L+  TL +RE+ I RLYYGLD E  TWED
Sbjct: 410  ETHHSYIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWED 469

Query: 464  ISKQLGLSRERVRQIGIVSMEKLKHTMR 381
            ISK++GLSRERVRQ+G+V++EKLKH  R
Sbjct: 470  ISKRIGLSRERVRQVGLVALEKLKHAAR 497


>XP_002325882.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            EEF00264.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein
            [Populus trichocarpa]
          Length = 509

 Score =  344 bits (883), Expect = e-108
 Identities = 201/504 (39%), Positives = 313/504 (62%), Gaps = 11/504 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPF---HDQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+S+GKRLL++SF + ++++     +D G++   T     +IV A+K +N   
Sbjct: 2    MATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIV-AKKSSNYGP 60

Query: 1688 RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKTML 1509
                  +   + +  +  V  A+A    +      D  E+E+  L  S+E+L++++K+ML
Sbjct: 61   SFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 1508 EKQWD-----EYSNDGSEDKEASEV-VRSHKPSARERRLASRRKS-TEGCYKGDVMN-KI 1353
            EKQW+       S+D +  K   ++ V     SAR+RR+ +RRK+  +  +     + K 
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKF 180

Query: 1352 LRRNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLKA 1173
            LR      +L +    + +G  +        VL   EV  LS+ I+ GL     + RLK 
Sbjct: 181  LRSVSSPDLLQNRLKGYVKGVVSDE------VLPHTEVVRLSRIIRAGLSFEDHKSRLKE 234

Query: 1172 KLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIGD 993
            +LG EPS  Q A S+ +S  +L +KL++ S+AR++L MSNVRLV+SIA+KY+N+G E+ D
Sbjct: 235  RLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMAD 294

Query: 992  LIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQI 813
            L++ GL GL RGIEKFD SKG+  STYVYWWIRQ ++RAL D+S+T +   H+ ER+  I
Sbjct: 295  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLI 354

Query: 812  LSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTFQ 633
             + K  LE +G  P+ +R+A++LN+S   V+NA +   +V S+D +A+P  N     T  
Sbjct: 355  RNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHH 414

Query: 632  DFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISKQ 453
             +IAD+  ++ PW+ ++  AL+E+V  L++STL +RE+ I RLY+GLD E  TWEDISK+
Sbjct: 415  SYIADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKR 474

Query: 452  LGLSRERVRQIGIVSMEKLKHTMR 381
            +GLSRERVRQ+G+V++EKLKH  R
Sbjct: 475  MGLSRERVRQVGLVALEKLKHAAR 498


>XP_006437403.1 hypothetical protein CICLE_v10031289mg [Citrus clementina] ESR50643.1
            hypothetical protein CICLE_v10031289mg [Citrus
            clementina]
          Length = 508

 Score =  344 bits (882), Expect = e-108
 Identities = 209/508 (41%), Positives = 312/508 (61%), Gaps = 15/508 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPF---HDQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+SAGKRLL++SF + ++S+ F   +D G S  + +     +V A+K +N   
Sbjct: 2    MATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLG-SANSQVGSTKNVVAAKKSSNYNP 60

Query: 1688 R---KKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEK 1518
                  +  Q +KA ++       +TAE  A    S     E+E+  L  S+E+L++++K
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSI----EEESSELDYSVEALLLLQK 116

Query: 1517 TMLEKQWD-----EYSNDGSEDKEASEV-VRSHKPSARERRLASRRKSTEGCYKGDVMNK 1356
            +MLEKQW+         D    K   +V V     SAR+RRL S++K           NK
Sbjct: 117  SMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILS-------QNK 169

Query: 1355 -ILRRN--KRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQ 1185
             +L++N  K+ R ++   +             +  +L   EV  LS+KI+ GL L   + 
Sbjct: 170  SVLQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKL 229

Query: 1184 RLKAKLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGL 1005
            RLK +LG EPS  Q AAS+ +S  EL + LME S+AR++L MSNVRLV+SIA++Y+N+G 
Sbjct: 230  RLKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGA 289

Query: 1004 EIGDLIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQER 825
            ++ DLI+ GL GL RGIEKFD SKG+  STYVYWWIRQ ++RAL ++S+T +   H+ ER
Sbjct: 290  DMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHER 349

Query: 824  VYQILSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKS 645
            +  I + K  LE +G  P  +R+A+ LN+S   V+NA +   +V S+D +A+P  N    
Sbjct: 350  LGLIRNAKLRLEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPG 409

Query: 644  STFQDFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWED 465
             T   +IAD+ +++ PW+ ++  AL+++V  L+  TL +RE+ I RLYYGLD E  TWED
Sbjct: 410  ETHHSYIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWED 469

Query: 464  ISKQLGLSRERVRQIGIVSMEKLKHTMR 381
            ISK++GLSRERVRQ+G+V++EKLKH  R
Sbjct: 470  ISKRIGLSRERVRQVGLVALEKLKHAAR 497


>JAT47854.1 RNA polymerase sigma factor rpoD [Anthurium amnicola] JAT55305.1 RNA
            polymerase sigma factor rpoD [Anthurium amnicola]
          Length = 504

 Score =  343 bits (881), Expect = e-107
 Identities = 201/503 (39%), Positives = 307/503 (61%), Gaps = 10/503 (1%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPFH---DQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G++AGKRLL+TSF   ++++      D GM           IV  R    ++ 
Sbjct: 1    MATAAVIGLTAGKRLLSTSFCPSDLTEKLFSSPDHGMGQFRAASTKNFIVAKRTPNFSQN 60

Query: 1688 RK-KKHRQYLKASRDF-EGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKT 1515
                +H Q +KA R++ +     +TA+   S    ++    D++   +  LE+L++++K+
Sbjct: 61   APCHRHTQSIKAPREYADASSAMSTAD---SWFQRSNISANDDDLDAESPLEALLLLQKS 117

Query: 1514 MLEKQWDEYSNDGS-----EDKEASEVVRSHKPSARERRLASRRKSTEGCYKGDVMNKIL 1350
            MLEKQW    +  +     E  +   V RS   SAR+RR + RR+S             L
Sbjct: 118  MLEKQWILSCHQSALVSTGESYKQPGVTRSGI-SARQRRTSIRRRSLNQSIPS------L 170

Query: 1349 RRNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLKAK 1170
             + K+   ++   +   +         +  +L   EV  LS+KI+ GL L   + +LK K
Sbjct: 171  NKRKQPGPIVSPELVQNQFRGYVRGTISEHLLSHAEVVNLSEKIKFGLFLEEHKSKLKEK 230

Query: 1169 LGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIGDL 990
            LG+EPS  Q A+S++MS  EL +K++E S+AR++L MSNVRLVLSIA+KY N+G E+ DL
Sbjct: 231  LGFEPSDKQLASSLSMSHPELQSKMIECSLAREKLAMSNVRLVLSIAQKYVNMGAELPDL 290

Query: 989  IREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQIL 810
            ++ GL GL RGIEKFD S+G+  STY YWW+RQ ++RAL ++SK  +   H+ ER++ I 
Sbjct: 291  VQGGLLGLLRGIEKFDSSRGFRISTYAYWWVRQGVSRALVENSKILRLPSHLHERMFSIR 350

Query: 809  SVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTFQD 630
            +V+  LE +G AP+ E++A+ +N+S+  V+NA++   RV S+D +A+P  N     TF  
Sbjct: 351  NVQIRLEERGVAPSIEKLAECMNMSTKKVRNAIEAVSRVFSLDREAFPSLNGLLGETFHS 410

Query: 629  FIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISKQL 450
            +IAD+  ++ PW+ ++  +L+E+V  LL STLT+RE+ I  LYYGL  E  TWEDI KQ 
Sbjct: 411  YIADNHPENNPWHGVDEWSLKEEVNRLLCSTLTERERDIICLYYGLRKEPHTWEDIGKQF 470

Query: 449  GLSRERVRQIGIVSMEKLKHTMR 381
            GLSRERVRQ+G+V++EKLKH  R
Sbjct: 471  GLSRERVRQVGLVALEKLKHAAR 493


>XP_013442452.1 RNA polymerase sigma factor [Medicago truncatula] KEH16477.1 RNA
            polymerase sigma factor [Medicago truncatula]
          Length = 504

 Score =  343 bits (881), Expect = e-107
 Identities = 205/504 (40%), Positives = 305/504 (60%), Gaps = 11/504 (2%)
 Frame = -3

Query: 1859 MSTAAIVGISAGKRLLNTSFTHIEVSKPFH---DQGMSTITTLPRHGIIVCARKVTNART 1689
            M+TAA++G+S GKRLL++S+ + ++ + F    D G +     P   +IV  +      T
Sbjct: 1    MATAAVIGLSGGKRLLSSSYHYSDIIEKFSHACDFGSTQYQLPPSKSVIVAKKSSKYTPT 60

Query: 1688 -RKKKHRQYLKASRDFEGLVPCATAELIASVETSASDKEEDENKHLQQSLESLMIMEKTM 1512
               ++  Q +KA +  E +V  A A+     +   S+  E E+  +  SL+SL++++K+M
Sbjct: 61   FPPERKNQSIKALK--EHVVDSAQADSEQWFQGYNSNDFEVESSDMDYSLDSLLLLQKSM 118

Query: 1511 LEKQWD------EYSNDGSEDKEASEV-VRSHKPSARERRLASRRKSTEGCYKGDVMNKI 1353
            LEKQW         S +   +K   +V V     SAR+RR+ ++RK      K       
Sbjct: 119  LEKQWSLSFERKVLSENSRREKIRRKVSVTCSGVSARQRRMTTKRKVAA---KSGSAVMQ 175

Query: 1352 LRRNKRQRVLLHSSVFHGEGANNSSRKQTYTVLKREEVTWLSQKIQCGLHLHRIRQRLKA 1173
            LR      ++ +    + +G           +L   EV  LS+KI+ GL L   + RLK 
Sbjct: 176  LRSTISPELIQNRLKGYVKGVVCDE------LLSHAEVVKLSEKIKAGLSLDEHKSRLKE 229

Query: 1172 KLGYEPSKAQWAASMNMSLVELNAKLMEYSMARDELKMSNVRLVLSIARKYENLGLEIGD 993
            +LG EPS  Q A S+ +S  +L AK++E S+AR++L MSNVRLVLSIA++Y+N+G E+GD
Sbjct: 230  RLGSEPSDDQVATSLKISRADLRAKIIECSLAREKLTMSNVRLVLSIAQRYDNMGAEMGD 289

Query: 992  LIREGLAGLSRGIEKFDPSKGYNFSTYVYWWIRQSITRALADHSKTTQGAGHMQERVYQI 813
            L++ GL GL RGIEKFD SKG+  STYVYWWIRQ ++RAL ++S+T +   H+ ER+  I
Sbjct: 290  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLI 349

Query: 812  LSVKQELESQGTAPTNERVAKALNISSLMVKNAMKTNKRVVSMDMQAYPKSNLGKSSTFQ 633
             + + +LE +G  PT +R+AK+LN+S   V+NA +   +V S+D +A+P  N     T  
Sbjct: 350  RNAEYKLEERGITPTIDRIAKSLNMSQRKVRNATEATSKVFSLDREAFPSLNGLPGDTHH 409

Query: 632  DFIADDSIDSQPWYAIEGDALREDVKDLLESTLTKREQMITRLYYGLDTENQTWEDISKQ 453
             FIAD   ++ PW  ++  AL+E+V  L+  TL +RE+ I RLYYGLD E  TWEDISK+
Sbjct: 410  SFIADKQNENIPWNVVDEWALKEEVNRLINLTLVEREREIIRLYYGLDKECLTWEDISKR 469

Query: 452  LGLSRERVRQIGIVSMEKLKHTMR 381
            +GLSRERVRQ+G+V++EKLKH  R
Sbjct: 470  IGLSRERVRQVGLVALEKLKHAAR 493