BLASTX nr result
ID: Ephedra29_contig00010253
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00010253
(586 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ADE76390.1 unknown [Picea sitchensis] 88 3e-17
XP_008777145.1 PREDICTED: DNA repair protein XRCC4 [Phoenix dact... 74 8e-13
XP_010932893.1 PREDICTED: DNA repair protein XRCC4 [Elaeis guine... 74 2e-12
XP_006420172.1 hypothetical protein CICLE_v10007171mg, partial [... 73 2e-12
XP_006420162.1 hypothetical protein CICLE_v10005690mg [Citrus cl... 73 4e-12
XP_018680100.1 PREDICTED: DNA repair protein XRCC4 isoform X2 [M... 73 4e-12
KVH91293.1 DNA repair protein XRCC4 [Cynara cardunculus var. sco... 73 4e-12
XP_009396066.1 PREDICTED: DNA repair protein XRCC4 isoform X1 [M... 73 5e-12
JAT63847.1 DNA repair protein XRCC4, partial [Anthurium amnicola] 72 6e-12
CBI26376.3 unnamed protein product, partial [Vitis vinifera] 72 8e-12
XP_010650008.1 PREDICTED: DNA repair protein XRCC4 isoform X2 [V... 72 8e-12
XP_008391163.1 PREDICTED: DNA repair protein XRCC4 isoform X1 [M... 72 8e-12
XP_002284388.2 PREDICTED: DNA repair protein XRCC4 isoform X1 [V... 72 8e-12
XP_002466484.1 hypothetical protein SORBIDRAFT_01g008590 [Sorghu... 72 1e-11
OAY77272.1 DNA repair protein XRCC4 [Ananas comosus] 71 2e-11
XP_016673668.1 PREDICTED: DNA repair protein XRCC4-like [Gossypi... 71 2e-11
XP_015887826.1 PREDICTED: DNA repair protein XRCC4 [Ziziphus juj... 71 2e-11
XP_015389146.1 PREDICTED: DNA repair protein XRCC4 [Citrus sinen... 71 2e-11
XP_017639926.1 PREDICTED: DNA repair protein XRCC4 isoform X2 [G... 71 2e-11
XP_016678948.1 PREDICTED: DNA repair protein XRCC4-like [Gossypi... 71 2e-11
>ADE76390.1 unknown [Picea sitchensis]
Length = 334
Score = 87.8 bits (216), Expect = 3e-17
Identities = 69/184 (37%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK-------SQNLRQQ-X 156
EAEKCL QSEKFKNEK EFE ++AKFVAVLNSKKAKLRELREK +N+R+
Sbjct: 153 EAEKCLAQSEKFKNEKAEFETTIFAKFVAVLNSKKAKLRELREKCLHSEPAKKNVREDAS 212
Query: 157 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSEDADTTRKLSKSKAYLAGKSKANTDIEEE 336
K SE A+ +K KS G S A ++ E
Sbjct: 213 DFSEEETDMESDQNDNEESSAGPTHSDSKDSEGAEINKKPLKS---TGGVSPAPSNKATE 269
Query: 337 KPTQKTNTDDAKLQNISEPA-------------KNLVDEDEXXXXXXXXXXXXNYTSAPK 477
+K N+ D K SEP D E YTSAPK
Sbjct: 270 NRLEKQNSTDEKKNITSEPTDPDATQVLGDAEISKDSDHGEPSASAAGLLAVSEYTSAPK 329
Query: 478 RRRR 489
+RRR
Sbjct: 330 KRRR 333
>XP_008777145.1 PREDICTED: DNA repair protein XRCC4 [Phoenix dactylifera]
Length = 233
Score = 74.3 bits (181), Expect = 8e-13
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREKSQNL 144
EAE+CL+QSEKF NEK EFE VY+KFVAVLNSKKAKLRELR++ L
Sbjct: 157 EAERCLLQSEKFNNEKAEFESAVYSKFVAVLNSKKAKLRELRDRISKL 204
>XP_010932893.1 PREDICTED: DNA repair protein XRCC4 [Elaeis guineensis]
Length = 264
Score = 73.9 bits (180), Expect = 2e-12
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREKSQNL 144
EAE+CL+QSEKF NEK EFE VY KFVAVLNSKKAKLRELR++ L
Sbjct: 157 EAERCLLQSEKFNNEKAEFESAVYTKFVAVLNSKKAKLRELRDRISKL 204
>XP_006420172.1 hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
ESR33412.1 hypothetical protein CICLE_v10007171mg,
partial [Citrus clementina]
Length = 243
Score = 73.2 bits (178), Expect = 2e-12
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSE+FKNEK EFE VYAKF+ VLNSKK+KLRELR+K
Sbjct: 138 EAEKCLAQSERFKNEKLEFESAVYAKFLGVLNSKKSKLRELRDK 181
>XP_006420162.1 hypothetical protein CICLE_v10005690mg [Citrus clementina]
ESR33402.1 hypothetical protein CICLE_v10005690mg
[Citrus clementina]
Length = 256
Score = 72.8 bits (177), Expect = 4e-12
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSE+FKNEK EFE +YAKF+ VLNSKK+KLRELR+K
Sbjct: 152 EAEKCLAQSERFKNEKLEFESAIYAKFLGVLNSKKSKLRELRDK 195
>XP_018680100.1 PREDICTED: DNA repair protein XRCC4 isoform X2 [Musa acuminata
subsp. malaccensis]
Length = 264
Score = 72.8 bits (177), Expect = 4e-12
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL+QSE+F NEK EFE VY KFVA+LNSKKAKLRELR++
Sbjct: 157 EAEKCLLQSERFSNEKVEFESAVYTKFVAILNSKKAKLRELRDR 200
>KVH91293.1 DNA repair protein XRCC4 [Cynara cardunculus var. scolymus]
Length = 264
Score = 72.8 bits (177), Expect = 4e-12
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREKSQN 141
EAEKCL QSEKF+NEK EFE +Y KFV VLNSKK+KLRELR++ N
Sbjct: 166 EAEKCLAQSEKFQNEKAEFETTIYTKFVGVLNSKKSKLRELRDRLSN 212
>XP_009396066.1 PREDICTED: DNA repair protein XRCC4 isoform X1 [Musa acuminata
subsp. malaccensis]
Length = 271
Score = 72.8 bits (177), Expect = 5e-12
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL+QSE+F NEK EFE VY KFVA+LNSKKAKLRELR++
Sbjct: 164 EAEKCLLQSERFSNEKVEFESAVYTKFVAILNSKKAKLRELRDR 207
>JAT63847.1 DNA repair protein XRCC4, partial [Anthurium amnicola]
Length = 263
Score = 72.4 bits (176), Expect = 6e-12
Identities = 36/44 (81%), Positives = 38/44 (86%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSEKF NEK EFE VY KFVAVLNSKKAKLRELR++
Sbjct: 185 EAEKCLAQSEKFCNEKVEFESVVYGKFVAVLNSKKAKLRELRDR 228
>CBI26376.3 unnamed protein product, partial [Vitis vinifera]
Length = 258
Score = 72.0 bits (175), Expect = 8e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSEKF NEK EFE +YAKF+ VLNSKKAKLRELR++
Sbjct: 153 EAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQ 196
>XP_010650008.1 PREDICTED: DNA repair protein XRCC4 isoform X2 [Vitis vinifera]
Length = 259
Score = 72.0 bits (175), Expect = 8e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSEKF NEK EFE +YAKF+ VLNSKKAKLRELR++
Sbjct: 153 EAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQ 196
>XP_008391163.1 PREDICTED: DNA repair protein XRCC4 isoform X1 [Malus domestica]
Length = 259
Score = 72.0 bits (175), Expect = 8e-12
Identities = 35/47 (74%), Positives = 38/47 (80%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREKSQN 141
EAEKCL QSEK NEK EFE +YAKF+ VLNSKKAKLRELR+K N
Sbjct: 154 EAEKCLAQSEKITNEKIEFESAIYAKFLGVLNSKKAKLRELRDKLSN 200
>XP_002284388.2 PREDICTED: DNA repair protein XRCC4 isoform X1 [Vitis vinifera]
Length = 259
Score = 72.0 bits (175), Expect = 8e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSEKF NEK EFE +YAKF+ VLNSKKAKLRELR++
Sbjct: 153 EAEKCLAQSEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQ 196
>XP_002466484.1 hypothetical protein SORBIDRAFT_01g008590 [Sorghum bicolor]
EER93482.1 hypothetical protein SORBI_001G095800
[Sorghum bicolor]
Length = 283
Score = 71.6 bits (174), Expect = 1e-11
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSE+F NEKTEFE ++KFVAVLNSKKAKLR+LR+K
Sbjct: 166 EAEKCLQQSERFNNEKTEFEQATFSKFVAVLNSKKAKLRQLRDK 209
>OAY77272.1 DNA repair protein XRCC4 [Ananas comosus]
Length = 264
Score = 71.2 bits (173), Expect = 2e-11
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREKSQNL 144
EAE+CL QSE+F NEK EFE VY+KFVA+LNSKKAKLR+LR++ L
Sbjct: 161 EAERCLQQSERFSNEKVEFESSVYSKFVAILNSKKAKLRDLRDRISKL 208
>XP_016673668.1 PREDICTED: DNA repair protein XRCC4-like [Gossypium hirsutum]
Length = 256
Score = 70.9 bits (172), Expect = 2e-11
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSE+F NEK EFE ++YAKF+ VLNSKKAKLRELR++
Sbjct: 151 EAEKCLEQSERFTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQ 194
>XP_015887826.1 PREDICTED: DNA repair protein XRCC4 [Ziziphus jujuba]
Length = 256
Score = 70.9 bits (172), Expect = 2e-11
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREKSQ 138
E+EKCL QSEK NEK EFE VYAKF+AVLNSKKAKLRELR++ Q
Sbjct: 152 ESEKCLAQSEKLTNEKMEFESAVYAKFLAVLNSKKAKLRELRDQLQ 197
>XP_015389146.1 PREDICTED: DNA repair protein XRCC4 [Citrus sinensis]
Length = 256
Score = 70.9 bits (172), Expect = 2e-11
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSE+F NEK EFE +YAKF+ VLNSKK+KLRELR+K
Sbjct: 151 EAEKCLAQSERFNNEKLEFESAIYAKFLGVLNSKKSKLRELRDK 194
>XP_017639926.1 PREDICTED: DNA repair protein XRCC4 isoform X2 [Gossypium arboreum]
Length = 261
Score = 70.9 bits (172), Expect = 2e-11
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSE+F NEK EFE ++YAKF+ VLNSKKAKLRELR++
Sbjct: 156 EAEKCLEQSERFTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQ 199
>XP_016678948.1 PREDICTED: DNA repair protein XRCC4-like [Gossypium hirsutum]
Length = 261
Score = 70.9 bits (172), Expect = 2e-11
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +1
Query: 1 EAEKCLVQSEKFKNEKTEFEHDVYAKFVAVLNSKKAKLRELREK 132
EAEKCL QSE+F NEK EFE ++YAKF+ VLNSKKAKLRELR++
Sbjct: 156 EAEKCLEQSERFTNEKMEFESEIYAKFLGVLNSKKAKLRELRDQ 199