BLASTX nr result

ID: Ephedra29_contig00010212 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00010212
         (947 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006851241.1 PREDICTED: myb-like protein AA [Amborella trichop...    63   3e-07
XP_001758325.1 predicted protein [Physcomitrella patens] EDQ7672...    59   8e-06

>XP_006851241.1 PREDICTED: myb-like protein AA [Amborella trichopoda] ERN12822.1
           hypothetical protein AMTR_s00180p00027580 [Amborella
           trichopoda]
          Length = 937

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 49/127 (38%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
 Frame = -2

Query: 421 RPKKYAPRVS--SSLHESDSHKDTERANQKKRRVGSPHNNHVTNIGSGKDR---GYGSDD 257
           R  K +P V   S  +E D  +  E    KKRR  S  +  V   G    R      SD 
Sbjct: 18  RRSKASPAVKLVSVCNEGDGGR-REIVLSKKRRWESQEDRVVVEYGGRGQREGDNNNSDG 76

Query: 256 AEMGRSDEEYDDLPPPSHSSR---------PWKLKLHTKVREELSPINSAVVPRKLRTAM 104
            E   S+EE DDLPPP+  S          PWK+KL  K  EE + ++ A VPRKLR+AM
Sbjct: 77  YETVGSEEEDDDLPPPTFGSSTSSATVAGYPWKIKLQGKAWEEANTMDRAPVPRKLRSAM 136

Query: 103 TKRQHPS 83
            KR   S
Sbjct: 137 NKRNRES 143


>XP_001758325.1 predicted protein [Physcomitrella patens] EDQ76727.1 predicted
           protein [Physcomitrella patens]
          Length = 2105

 Score = 58.5 bits (140), Expect = 8e-06
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
 Frame = -2

Query: 484 SNEDGDDMIDNETSSQSRVQDRPKKYAPRVSSSLHESDSHKDTERANQKKRRVGSPHNNH 305
           + +DGDDM+  E     R+++R KK    V+SS H + S      +  K++R GS     
Sbjct: 34  AGDDGDDMM--EDGHNGRLRERGKKDGGGVTSS-HGAGSSIVGSSSRSKRKRYGSQEKQR 90

Query: 304 VTNIGSGKDRGYGSD-------DAEMGRSDEEYDDLPPPSHSSRPWKLKLHTKVREELSP 146
               G G+ R   ++       D EMG S+++ DD PPP    R  K +   K  E+ + 
Sbjct: 91  Q---GQGQGRRSPAEEVEETTEDTEMGASEDD-DDQPPPIIVRRSGKARAQAKFSEDGNG 146

Query: 145 INSAVVPRKLRTAMTKR 95
           ++   VPRK RTA+ KR
Sbjct: 147 VDLPAVPRKARTAIGKR 163


Top