BLASTX nr result
ID: Ephedra29_contig00010127
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00010127
(1579 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_008082186.1 photosystem I assembly protein ycf3 (chloroplast)... 161 9e-45
YP_001152170.1 ORF82b [Pinus koraiensis] YP_009243505.1 photosys... 161 1e-44
AEQ94199.1 photosystem I assembly protein Ycf3, partial (chlorop... 159 4e-44
APX55429.1 photosystem I assembly protein Ycf3 (chloroplast) [To... 159 7e-44
YP_002519946.1 photosystem I assembly protein Ycf3 (chloroplast)... 160 5e-43
XP_006431325.1 hypothetical protein CICLE_v10030468mg [Citrus cl... 155 3e-42
AEQ94200.1 photosystem I assembly protein Ycf3, partial (chlorop... 154 3e-42
EYU35343.1 hypothetical protein MIMGU_mgv11b014479mg [Erythranth... 154 4e-42
YP_398330.1 photosystem I assembly protein Ycf3 [Lactuca sativa]... 154 4e-42
AMA21044.1 hypothetical chloroplast RF34 (plastid) [Welwitschia ... 157 5e-42
AKJ77620.1 photosystem I assembly protein Ycf3 (chloroplast) [Fa... 153 1e-41
YP_009144114.1 photosystem I assembly protein Ycf3 (chloroplast)... 157 1e-41
YP_001876568.1 hypothetical chloroplast RF3 [Welwitschia mirabil... 155 3e-41
ACG30634.1 hypothetical protein [Zea mays] 152 3e-41
BAH11237.1 photosystem I assembly protein Ycf3 (chloroplast) [We... 155 3e-41
ANZ53649.1 hypothetical chloroplast RF34 (plastid) [Gnetum gnemon] 155 4e-41
YP_002519791.1 photosystem I assembly protein Ycf3 [Gnetum parvi... 155 4e-41
YP_009117835.1 hypothetical chloroplast RF34 (plastid) [Gnetum g... 155 4e-41
YP_009193292.1 photosystem I assembly protein Ycf3 (chloroplast)... 155 4e-41
YP_009185746.1 photosystem I assembly protein Ycf3 (chloroplast)... 155 4e-41
>YP_008082186.1 photosystem I assembly protein ycf3 (chloroplast) [Gnetum montanum]
AGL11031.1 photosystem I assembly protein ycf3
(chloroplast) [Gnetum montanum]
Length = 82
Score = 161 bits (408), Expect = 9e-45
Identities = 77/80 (96%), Positives = 78/80 (97%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMRLE+DPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN
Sbjct: 1 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 60
Query: 834 PTLPQAFNNTALICHYVRLS 893
P LPQA NNTALICHYVRLS
Sbjct: 61 PILPQALNNTALICHYVRLS 80
>YP_001152170.1 ORF82b [Pinus koraiensis] YP_009243505.1 photosystem I assembly
protein Ycf3 (chloroplast) [Pinus armandii] ABP35416.1
ORF82b (chloroplast) [Pinus koraiensis] AJT70481.1
photosystem I assembly protein Ycf3 (chloroplast) [Pinus
armandii]
Length = 82
Score = 161 bits (407), Expect = 1e-44
Identities = 77/81 (95%), Positives = 78/81 (96%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMRLE DPYDRSYILYNIGLVHTSNGEH KALEYYFQALERN
Sbjct: 1 MSAQSEGEYAEALQNYYEAMRLETDPYDRSYILYNIGLVHTSNGEHTKALEYYFQALERN 60
Query: 834 PTLPQAFNNTALICHYVRLSV 896
P+LPQA NNTALICHYVRLSV
Sbjct: 61 PSLPQALNNTALICHYVRLSV 81
>AEQ94199.1 photosystem I assembly protein Ycf3, partial (chloroplast) [Catalpa
bungei]
Length = 80
Score = 159 bits (403), Expect = 4e-44
Identities = 76/80 (95%), Positives = 77/80 (96%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMRLE DPYDRSYILYNIGLVHTSNGEH KALEYYFQALERN
Sbjct: 1 MSAQSEGEYAEALQNYYEAMRLETDPYDRSYILYNIGLVHTSNGEHTKALEYYFQALERN 60
Query: 834 PTLPQAFNNTALICHYVRLS 893
P+LPQA NNTALICHYVRLS
Sbjct: 61 PSLPQALNNTALICHYVRLS 80
>APX55429.1 photosystem I assembly protein Ycf3 (chloroplast) [Torreya jackii]
Length = 82
Score = 159 bits (402), Expect = 7e-44
Identities = 75/81 (92%), Positives = 78/81 (96%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMR E+DPYDRSYILYNIGL+HTSNGEH KALEYYFQALERN
Sbjct: 1 MSAQSEGEYAEALQNYYEAMRPEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERN 60
Query: 834 PTLPQAFNNTALICHYVRLSV 896
P+LPQA NNTALICHYVRLSV
Sbjct: 61 PSLPQALNNTALICHYVRLSV 81
>YP_002519946.1 photosystem I assembly protein Ycf3 (chloroplast) [Ephedra
equisetina] YP_009231414.1 photosystem I assembly
protein Ycf3 (chloroplast) [Ephedra foeminea] BAH11314.1
photosystem I assembly protein Ycf3 (chloroplast)
[Ephedra equisetina] ALV90130.1 photosystem I assembly
protein Ycf3 (chloroplast) [Ephedra foeminea]
Length = 168
Score = 160 bits (404), Expect = 5e-43
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 102
Query: 834 PTLPQAFNNTALICHY 881
PTLPQAFNNTALICHY
Sbjct: 103 PTLPQAFNNTALICHY 118
>XP_006431325.1 hypothetical protein CICLE_v10030468mg [Citrus clementina]
XP_006435531.1 hypothetical protein CICLE_v10010876mg
[Citrus clementina] XP_006445528.1 hypothetical protein
CICLE_v10004110mg [Citrus clementina] ESR44565.1
hypothetical protein CICLE_v10030468mg [Citrus
clementina] ESR48771.1 hypothetical protein
CICLE_v10010876mg [Citrus clementina] ESR58768.1
hypothetical protein CICLE_v10004110mg [Citrus
clementina]
Length = 82
Score = 155 bits (391), Expect = 3e-42
Identities = 72/81 (88%), Positives = 77/81 (95%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGL+HTSNGEH KALEYYF+ALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 834 PTLPQAFNNTALICHYVRLSV 896
P LPQAFNN A+ICHYVRLS+
Sbjct: 61 PFLPQAFNNMAVICHYVRLSL 81
>AEQ94200.1 photosystem I assembly protein Ycf3, partial (chloroplast)
[Fraxinus chinensis]
Length = 80
Score = 154 bits (390), Expect = 3e-42
Identities = 72/80 (90%), Positives = 76/80 (95%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGL+HTSNGEH KALEYYF+ALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 834 PTLPQAFNNTALICHYVRLS 893
P LPQAFNN A+ICHYVRLS
Sbjct: 61 PFLPQAFNNMAVICHYVRLS 80
>EYU35343.1 hypothetical protein MIMGU_mgv11b014479mg [Erythranthe guttata]
Length = 82
Score = 154 bits (390), Expect = 4e-42
Identities = 72/80 (90%), Positives = 76/80 (95%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGL+HTSNGEH KALEYYF+ALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 834 PTLPQAFNNTALICHYVRLS 893
P LPQAFNN A+ICHYVRLS
Sbjct: 61 PFLPQAFNNMAVICHYVRLS 80
>YP_398330.1 photosystem I assembly protein Ycf3 [Lactuca sativa] XP_002888370.1
photosystem I assembly protein Ycf3 [Arabidopsis lyrata
subsp. lyrata] BAE47595.1 photosystem I assembly protein
ycf3 (chloroplast) [Lactuca sativa] ACU16011.1 unknown
[Glycine max] EFH64629.1 photosystem I assembly protein
Ycf3 [Arabidopsis lyrata subsp. lyrata] KHN39943.1
Photosystem I assembly protein ycf3 [Glycine soja]
AJE73883.1 photosystem I assembly protein Ycf3 (plastid)
[Vernonia baldwinii] AKJ77455.1 photosystem I assembly
protein Ycf3 (chloroplast) [Carthamus tinctorius]
ANC95058.1 hypothetical chloroplast RF34 (chloroplast)
[Dunalia spathulata] ONI30742.1 hypothetical protein
PRUPE_1G271000 [Prunus persica] prf||1211235AE ORF 82
Length = 82
Score = 154 bits (390), Expect = 4e-42
Identities = 72/80 (90%), Positives = 76/80 (95%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGL+HTSNGEH KALEYYF+ALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 834 PTLPQAFNNTALICHYVRLS 893
P LPQAFNN A+ICHYVRLS
Sbjct: 61 PFLPQAFNNMAVICHYVRLS 80
>AMA21044.1 hypothetical chloroplast RF34 (plastid) [Welwitschia mirabilis]
Length = 169
Score = 157 bits (397), Expect = 5e-42
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = +3
Query: 651 RMSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALER 830
RMSAQSEGEYAEALQNYYEAMRLE+DPYDRSYILYNIGLVHTSNGEHAKALEYYFQALER
Sbjct: 43 RMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALER 102
Query: 831 NPTLPQAFNNTALICHY 881
NP LPQA NNTALICHY
Sbjct: 103 NPALPQALNNTALICHY 119
>AKJ77620.1 photosystem I assembly protein Ycf3 (chloroplast) [Fagopyrum
cymosum]
Length = 82
Score = 153 bits (387), Expect = 1e-41
Identities = 71/80 (88%), Positives = 76/80 (95%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGL+HTSNG+H KALEYYF+ALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGDHTKALEYYFRALERN 60
Query: 834 PTLPQAFNNTALICHYVRLS 893
P LPQAFNN A+ICHYVRLS
Sbjct: 61 PFLPQAFNNMAVICHYVRLS 80
>YP_009144114.1 photosystem I assembly protein Ycf3 (chloroplast) [Wollemia
nobilis] AKE36587.1 photosystem I assembly protein Ycf3
(chloroplast) [Wollemia nobilis]
Length = 180
Score = 157 bits (396), Expect = 1e-41
Identities = 73/78 (93%), Positives = 76/78 (97%)
Frame = +3
Query: 660 AQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERNPT 839
AQSEGEYAEALQNYYEAMRLE+DPYDRSYILYNIGL+HTSNGEH KALEYYFQALERNP+
Sbjct: 42 AQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPS 101
Query: 840 LPQAFNNTALICHYVRLS 893
LPQA NNTALICHYVRLS
Sbjct: 102 LPQALNNTALICHYVRLS 119
>YP_001876568.1 hypothetical chloroplast RF3 [Welwitschia mirabilis] ABY26781.1
hypothetical chloroplast RF3 (chloroplast) [Welwitschia
mirabilis]
Length = 168
Score = 155 bits (392), Expect = 3e-41
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMRLE+DPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 102
Query: 834 PTLPQAFNNTALICHY 881
P LPQA NNTALICHY
Sbjct: 103 PALPQALNNTALICHY 118
>ACG30634.1 hypothetical protein [Zea mays]
Length = 82
Score = 152 bits (384), Expect = 3e-41
Identities = 71/80 (88%), Positives = 75/80 (93%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
M AQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGL+HTSNGEH KALEYYF+ALERN
Sbjct: 1 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 834 PTLPQAFNNTALICHYVRLS 893
P LPQAFNN A+ICHYVRLS
Sbjct: 61 PFLPQAFNNMAVICHYVRLS 80
>BAH11237.1 photosystem I assembly protein Ycf3 (chloroplast) [Welwitschia
mirabilis]
Length = 169
Score = 155 bits (392), Expect = 3e-41
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMRLE+DPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN
Sbjct: 44 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 103
Query: 834 PTLPQAFNNTALICHY 881
P LPQA NNTALICHY
Sbjct: 104 PALPQALNNTALICHY 119
>ANZ53649.1 hypothetical chloroplast RF34 (plastid) [Gnetum gnemon]
Length = 168
Score = 155 bits (391), Expect = 4e-41
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMRLE+DPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 102
Query: 834 PTLPQAFNNTALICHY 881
P LPQA NNTALICHY
Sbjct: 103 PILPQALNNTALICHY 118
>YP_002519791.1 photosystem I assembly protein Ycf3 [Gnetum parvifolium] A6BM62.1
RecName: Full=Photosystem I assembly protein Ycf3
BAF64907.1 photosystem I assembly protein Ycf3
(chloroplast) [Gnetum parvifolium] BAH11302.1
photosystem I assembly protein Ycf3 (chloroplast)
[Gnetum parvifolium]
Length = 168
Score = 155 bits (391), Expect = 4e-41
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMRLE+DPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 102
Query: 834 PTLPQAFNNTALICHY 881
P LPQA NNTALICHY
Sbjct: 103 PILPQALNNTALICHY 118
>YP_009117835.1 hypothetical chloroplast RF34 (plastid) [Gnetum gnemon] AJE71463.1
hypothetical chloroplast RF34 (plastid) [Gnetum gnemon]
Length = 168
Score = 155 bits (391), Expect = 4e-41
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMRLE+DPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 102
Query: 834 PTLPQAFNNTALICHY 881
P LPQA NNTALICHY
Sbjct: 103 PILPQALNNTALICHY 118
>YP_009193292.1 photosystem I assembly protein Ycf3 (chloroplast) [Gnetum ula]
BAN16920.1 photosystem I assembly protein Ycf3
(chloroplast) [Gnetum ula] BAT70202.1 photosystem I
assembly protein Ycf3 (chloroplast) [Gnetum ula]
ANZ53583.1 hypothetical chloroplast RF34 (plastid)
[Gnetum gnemon] ANZ53715.1 hypothetical chloroplast RF34
(plastid) [Gnetum parvifolium] ANZ53781.1 hypothetical
chloroplast RF34 (plastid) [Gnetum parvifolium]
ANZ53847.1 hypothetical chloroplast RF34 (plastid)
[Gnetum parvifolium] ANZ53913.1 hypothetical chloroplast
RF34 (plastid) [Gnetum hainanense] ANZ53979.1
hypothetical chloroplast RF34 (plastid) [Gnetum
hainanense] ANZ54045.1 hypothetical chloroplast RF34
(plastid) [Gnetum montanum] ANZ54111.1 hypothetical
chloroplast RF34 (plastid) [Gnetum montanum] ANZ54177.1
hypothetical chloroplast RF34 (plastid) [Gnetum
pendulum] ANZ54243.1 hypothetical chloroplast RF34
(plastid) [Gnetum pendulum]
Length = 168
Score = 155 bits (391), Expect = 4e-41
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +3
Query: 654 MSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 833
MSAQSEGEYAEALQNYYEAMRLE+DPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALERN 102
Query: 834 PTLPQAFNNTALICHY 881
P LPQA NNTALICHY
Sbjct: 103 PILPQALNNTALICHY 118
>YP_009185746.1 photosystem I assembly protein Ycf3 (chloroplast) [Picea glauca]
ALO64263.1 photosystem I assembly protein Ycf3
(chloroplast) [Picea glauca] AOG75929.1 photosystem I
assembly protein Ycf3 (chloroplast) [Picea sitchensis]
Length = 170
Score = 155 bits (391), Expect = 4e-41
Identities = 73/77 (94%), Positives = 74/77 (96%)
Frame = +3
Query: 651 RMSAQSEGEYAEALQNYYEAMRLEVDPYDRSYILYNIGLVHTSNGEHAKALEYYFQALER 830
RMSAQSEGEYAEALQNYYEAMRLE DPYDRSYILYNIGLVHTSNGEH KALEYYFQALER
Sbjct: 43 RMSAQSEGEYAEALQNYYEAMRLETDPYDRSYILYNIGLVHTSNGEHTKALEYYFQALER 102
Query: 831 NPTLPQAFNNTALICHY 881
NP+LPQA NNTALICHY
Sbjct: 103 NPSLPQALNNTALICHY 119