BLASTX nr result
ID: Ephedra29_contig00010084
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00010084 (612 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_003624931.2 transcription elongation factor (TFIIS) family pr... 64 1e-08 XP_003624929.2 transcription elongation factor (TFIIS) family pr... 64 1e-08 XP_003624930.1 transcription elongation factor (TFIIS) family pr... 64 2e-08 XP_003624928.1 transcription elongation factor (TFIIS) family pr... 64 2e-08 AFK48326.1 unknown [Medicago truncatula] 63 3e-08 XP_019458617.1 PREDICTED: probable mediator of RNA polymerase II... 62 1e-07 XP_017242361.1 PREDICTED: probable mediator of RNA polymerase II... 61 1e-07 XP_019162677.1 PREDICTED: probable mediator of RNA polymerase II... 59 8e-07 XP_019162675.1 PREDICTED: probable mediator of RNA polymerase II... 59 8e-07 XP_006836259.1 PREDICTED: probable mediator of RNA polymerase II... 59 8e-07 XP_009790095.1 PREDICTED: probable mediator of RNA polymerase II... 58 2e-06 XP_019228595.1 PREDICTED: probable mediator of RNA polymerase II... 57 3e-06 XP_007145438.1 hypothetical protein PHAVU_007G239100g [Phaseolus... 57 3e-06 KOM34378.1 hypothetical protein LR48_Vigan02g052800 [Vigna angul... 57 4e-06 XP_017415780.1 PREDICTED: probable mediator of RNA polymerase II... 57 4e-06 KVH94777.1 Transcription elongation factor, TFIIS/CRSP70, N-term... 57 5e-06 XP_014514874.1 PREDICTED: probable mediator of RNA polymerase II... 57 5e-06 EYU18603.1 hypothetical protein MIMGU_mgv1a006753mg [Erythranthe... 56 7e-06 >XP_003624931.2 transcription elongation factor (TFIIS) family protein [Medicago truncatula] AES81149.2 transcription elongation factor (TFIIS) family protein [Medicago truncatula] Length = 322 Score = 63.9 bits (154), Expect = 1e-08 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 18/124 (14%) Frame = +3 Query: 279 DSVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYS------SNCLH 404 +S+++WR +F+ I+VA DCPKE KSRRDGIA+RL+S C Sbjct: 4 ESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEK 63 Query: 405 CCLDYDDSNNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDGNRNGVLSYEDVEALTDE 584 L D +N L +SV E K+ + +D N S+ + EALTDE Sbjct: 64 VELSVPDDDNGDELCKRSSVR-EGASKESKVDCSREENGVMDANPISNYSFGEAEALTDE 122 Query: 585 IDER 596 ++E+ Sbjct: 123 LEEQ 126 >XP_003624929.2 transcription elongation factor (TFIIS) family protein [Medicago truncatula] AES81147.2 transcription elongation factor (TFIIS) family protein [Medicago truncatula] Length = 325 Score = 63.9 bits (154), Expect = 1e-08 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 18/124 (14%) Frame = +3 Query: 279 DSVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYS------SNCLH 404 +S+++WR +F+ I+VA DCPKE KSRRDGIA+RL+S C Sbjct: 7 ESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEK 66 Query: 405 CCLDYDDSNNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDGNRNGVLSYEDVEALTDE 584 L D +N L +SV E K+ + +D N S+ + EALTDE Sbjct: 67 VELSVPDDDNGDELCKRSSVR-EGASKESKVDCSREENGVMDANPISNYSFGEAEALTDE 125 Query: 585 IDER 596 ++E+ Sbjct: 126 LEEQ 129 >XP_003624930.1 transcription elongation factor (TFIIS) family protein [Medicago truncatula] AES81148.1 transcription elongation factor (TFIIS) family protein [Medicago truncatula] Length = 444 Score = 63.9 bits (154), Expect = 2e-08 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 18/124 (14%) Frame = +3 Query: 279 DSVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYS------SNCLH 404 +S+++WR +F+ I+VA DCPKE KSRRDGIA+RL+S C Sbjct: 4 ESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEK 63 Query: 405 CCLDYDDSNNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDGNRNGVLSYEDVEALTDE 584 L D +N L +SV E K+ + +D N S+ + EALTDE Sbjct: 64 VELSVPDDDNGDELCKRSSVR-EGASKESKVDCSREENGVMDANPISNYSFGEAEALTDE 122 Query: 585 IDER 596 ++E+ Sbjct: 123 LEEQ 126 >XP_003624928.1 transcription elongation factor (TFIIS) family protein [Medicago truncatula] AES81146.1 transcription elongation factor (TFIIS) family protein [Medicago truncatula] Length = 447 Score = 63.9 bits (154), Expect = 2e-08 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 18/124 (14%) Frame = +3 Query: 279 DSVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYS------SNCLH 404 +S+++WR +F+ I+VA DCPKE KSRRDGIA+RL+S C Sbjct: 7 ESLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEK 66 Query: 405 CCLDYDDSNNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDGNRNGVLSYEDVEALTDE 584 L D +N L +SV E K+ + +D N S+ + EALTDE Sbjct: 67 VELSVPDDDNGDELCKRSSVR-EGASKESKVDCSREENGVMDANPISNYSFGEAEALTDE 125 Query: 585 IDER 596 ++E+ Sbjct: 126 LEEQ 129 >AFK48326.1 unknown [Medicago truncatula] Length = 451 Score = 63.2 bits (152), Expect = 3e-08 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 18/123 (14%) Frame = +3 Query: 282 SVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYS------SNCLHC 407 S+++WR +F+ I+VA DCPKE KSRRDGIA+RL+S C Sbjct: 8 SLDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVMLNRCKGCEKV 67 Query: 408 CLDYDDSNNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDGNRNGVLSYEDVEALTDEI 587 L D +N L +SV E K+ + +D N S+ + EALTDE+ Sbjct: 68 ELSVPDDDNGDELCKRSSVR-EGASKESKVDCSREENGVMDANPISNYSFGEAEALTDEL 126 Query: 588 DER 596 +E+ Sbjct: 127 EEQ 129 >XP_019458617.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Lupinus angustifolius] XP_019458618.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Lupinus angustifolius] XP_019458619.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Lupinus angustifolius] OIW03214.1 hypothetical protein TanjilG_21846 [Lupinus angustifolius] Length = 452 Score = 61.6 bits (148), Expect = 1e-07 Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 25/129 (19%) Frame = +3 Query: 282 SVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYS---SNCLHCCL- 413 S++ WR +F+ IMVA DCPKE + RRDGIA+RL+S + C+ C + Sbjct: 5 SLDHWRSYFRSANSDIFEIIDHAIMVAASDCPKEFRLRRDGIAERLFSCKLTRCVGCDMV 64 Query: 414 -------DYDDSNNKPSLVMPN-SVESE-NRKKDFSDSYDKFPTSSIDGNRNGVLSYEDV 566 D DD +N N VE E K+ + + +D NR S+ D Sbjct: 65 ELAVSADDGDDEHNDDDDDRDNDGVEFEAGASKESKVNCSREDHGDMDVNRVSNFSFGDA 124 Query: 567 EALTDEIDE 593 EALTDEI+E Sbjct: 125 EALTDEIEE 133 >XP_017242361.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Daucus carota subsp. sativus] KZN00373.1 hypothetical protein DCAR_009127 [Daucus carota subsp. sativus] Length = 445 Score = 61.2 bits (147), Expect = 1e-07 Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 22/127 (17%) Frame = +3 Query: 279 DSVEKWRKFFQX-------------IMVAVFDCPKELKSRRDGIAQRLYSSNCLHCCLDY 419 +++EKWR +F+ I+VA DCP+E K+RRD IA+ L+SS L C+ Sbjct: 8 NNLEKWRSYFRTCSGSDIFDIIENGILVAATDCPQEFKARRDRIAETLFSSK-LTKCVGC 66 Query: 420 DDSNNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDGNRNGVL---------SYEDVEA 572 D + SV SE+RK D K S +RNG + SY D EA Sbjct: 67 DR--------VDLSVASEDRKVDEGSKESK--VESFSDDRNGGMNVNKFENDYSYRDAEA 116 Query: 573 LTDEIDE 593 LTDE++E Sbjct: 117 LTDELEE 123 >XP_019162677.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Ipomoea nil] Length = 447 Score = 58.9 bits (141), Expect = 8e-07 Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 28/139 (20%) Frame = +3 Query: 279 DSVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYSSNCLHCCLDYD 422 ++++KWR +F+ +MVA DCPKE K RRD IA+ L++ C Sbjct: 6 ETMDKWRDYFRSANSDIFGIIEHAVMVAAMDCPKEFKLRRDRIAEMLFTCKATRC----- 60 Query: 423 DSNNKPSLVMPNSVESENRKKDFS----------------DSYDKFPTSSIDGNRNGVLS 554 N L +PN E + ++K+ DS D ++ N S Sbjct: 61 SGCNNVELALPNEDEVKEKRKNTGFAREFENGVSKESKTCDSRDDRAEMNVKQVSN--YS 118 Query: 555 YEDVEALTDEIDERDADVQ 611 Y D EALTDEI+E V+ Sbjct: 119 YGDAEALTDEIEEESLTVR 137 >XP_019162675.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Ipomoea nil] Length = 448 Score = 58.9 bits (141), Expect = 8e-07 Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 28/139 (20%) Frame = +3 Query: 279 DSVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYSSNCLHCCLDYD 422 ++++KWR +F+ +MVA DCPKE K RRD IA+ L++ C Sbjct: 6 ETMDKWRDYFRSANSDIFGIIEHAVMVAAMDCPKEFKLRRDRIAEMLFTCKATRC----- 60 Query: 423 DSNNKPSLVMPNSVESENRKKDFS----------------DSYDKFPTSSIDGNRNGVLS 554 N L +PN E + ++K+ DS D ++ N S Sbjct: 61 SGCNNVELALPNEDEVKEKRKNTGFAREFENGVSKESKTCDSRDDRAEMNVKQVSN--YS 118 Query: 555 YEDVEALTDEIDERDADVQ 611 Y D EALTDEI+E V+ Sbjct: 119 YGDAEALTDEIEEESLTVR 137 >XP_006836259.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Amborella trichopoda] XP_011620727.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Amborella trichopoda] ERM99112.1 hypothetical protein AMTR_s00101p00137160 [Amborella trichopoda] Length = 454 Score = 58.9 bits (141), Expect = 8e-07 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 14/123 (11%) Frame = +3 Query: 285 VEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYSSNCLHCCLDYDDS 428 ++ WR+FF+ I +A DCPKE + RRD IA+RLY+ + C Sbjct: 6 LDDWREFFREAGSDIFSVIEYAITIAASDCPKEFRLRRDKIAERLYACKLIRC-----GE 60 Query: 429 NNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDGNRNGV--LSYEDVEALTDEIDERDA 602 + ++ MP + K +SS D +RN + SY++ EALT+EI+E Sbjct: 61 CDNVTVAMPGEERESGFEGGSGGKESKVNSSSDDVDRNRISNYSYDEAEALTEEIEEESE 120 Query: 603 DVQ 611 V+ Sbjct: 121 IVR 123 >XP_009790095.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Nicotiana sylvestris] XP_016462384.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Nicotiana tabacum] Length = 457 Score = 57.8 bits (138), Expect = 2e-06 Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 24/128 (18%) Frame = +3 Query: 282 SVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYSSNCLHCCLDYDD 425 ++EKWR +F+ IMVA DCPKE K RRD IA+ L++ C Sbjct: 7 TLEKWRDYFRTANSDIFDIIEHAIMVAATDCPKEFKLRRDKIAEMLFTCKVTRCF----- 61 Query: 426 SNNKPSLVMPNSVESENRKKDFS------DSYDKFPTSSIDG------NRNGVLSYEDVE 569 +K L +P + + E + K+ S ++ + SSID N+ SY D E Sbjct: 62 GCDKVELAVPLANDDEGKNKNKSEFGGGFEAKESKANSSIDHHIELNVNQVSNYSYGDAE 121 Query: 570 ALTDEIDE 593 ALT+EI+E Sbjct: 122 ALTEEIEE 129 >XP_019228595.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Nicotiana attenuata] OIT30625.1 putative mediator of rna polymerase ii transcription subunit 26b [Nicotiana attenuata] Length = 457 Score = 57.4 bits (137), Expect = 3e-06 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 24/128 (18%) Frame = +3 Query: 282 SVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYSSNCLHCCLDYDD 425 ++EKWR +F+ +MVA DCPKE K RRD IA+ L++ C Sbjct: 7 TLEKWRDYFRTANSDIFDIIEHAVMVAATDCPKEFKLRRDKIAEMLFTCKVTRCF----- 61 Query: 426 SNNKPSLVMPNSVESENRKKDFS------DSYDKFPTSSIDG------NRNGVLSYEDVE 569 +K L +P + + E + K+ S ++ + SSID N+ SY D E Sbjct: 62 GCDKVELAVPLANDDEGKNKNKSEFGGGFEAKESKANSSIDHHIELNVNQVSNYSYGDAE 121 Query: 570 ALTDEIDE 593 ALT+EI+E Sbjct: 122 ALTEEIEE 129 >XP_007145438.1 hypothetical protein PHAVU_007G239100g [Phaseolus vulgaris] ESW17432.1 hypothetical protein PHAVU_007G239100g [Phaseolus vulgaris] Length = 457 Score = 57.4 bits (137), Expect = 3e-06 Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 30/140 (21%) Frame = +3 Query: 282 SVEKWRKFF------------QXIMVAVFDCPKELKSRRDGIAQRLYS---SNCLHC--- 407 S++ WR +F IMVA DCP+E + RRDGIA+RL+S S CL C Sbjct: 8 SLDYWRNYFGAANSDIFGIIDHAIMVAASDCPEEFRMRRDGIAERLFSCRLSRCLGCERV 67 Query: 408 --CLDYDDSNNKPSLVMPNSV-------ESE---NRKKDFSDSYDKFPTSSIDGNRNGVL 551 + DD + + V ESE +++ + + D P ++ NR Sbjct: 68 ELAVSVDDDGGEGGGGCKSGVDGAGAEFESEAGASKESKVNSARDDDP-GEMNTNRVSNY 126 Query: 552 SYEDVEALTDEIDERDADVQ 611 SY + EALTDEI+E V+ Sbjct: 127 SYGEAEALTDEIEEESQYVE 146 >KOM34378.1 hypothetical protein LR48_Vigan02g052800 [Vigna angularis] Length = 442 Score = 57.0 bits (136), Expect = 4e-06 Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 28/139 (20%) Frame = +3 Query: 279 DSVEKWRKFF------------QXIMVAVFDCPKELKSRRDGIAQRLYS---SNCLHC-- 407 +S++ WR +F IMVA DCP+E + RRDGIA+RL+S S CL C Sbjct: 4 ESLDYWRNYFGAANSDIFGIIDHAIMVAASDCPEEFRMRRDGIAERLFSCRLSRCLGCER 63 Query: 408 -----CLDYDDSNNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDG------NRNGVLS 554 +D D K +E + + K ++S+D NR S Sbjct: 64 VELSVPVDDDGGGCKNGF---ERAGAEFESEAGASKESKVNSASVDDPGVMNTNRASNYS 120 Query: 555 YEDVEALTDEIDERDADVQ 611 Y + EALTDEI+E V+ Sbjct: 121 YGEAEALTDEIEEESQYVE 139 >XP_017415780.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Vigna angularis] BAT96212.1 hypothetical protein VIGAN_08311400 [Vigna angularis var. angularis] Length = 445 Score = 57.0 bits (136), Expect = 4e-06 Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 28/139 (20%) Frame = +3 Query: 279 DSVEKWRKFF------------QXIMVAVFDCPKELKSRRDGIAQRLYS---SNCLHC-- 407 +S++ WR +F IMVA DCP+E + RRDGIA+RL+S S CL C Sbjct: 7 ESLDYWRNYFGAANSDIFGIIDHAIMVAASDCPEEFRMRRDGIAERLFSCRLSRCLGCER 66 Query: 408 -----CLDYDDSNNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDG------NRNGVLS 554 +D D K +E + + K ++S+D NR S Sbjct: 67 VELSVPVDDDGGGCKNGF---ERAGAEFESEAGASKESKVNSASVDDPGVMNTNRASNYS 123 Query: 555 YEDVEALTDEIDERDADVQ 611 Y + EALTDEI+E V+ Sbjct: 124 YGEAEALTDEIEEESQYVE 142 >KVH94777.1 Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type [Cynara cardunculus var. scolymus] Length = 363 Score = 56.6 bits (135), Expect = 5e-06 Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 12/115 (10%) Frame = +3 Query: 285 VEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYSSNCLHCCLDYDDS 428 ++ WR++FQ IMVA D PKE + RRDGIAQ L+S N + CC Sbjct: 10 MDYWREYFQTSNGDLFETIEKAIMVAASDYPKEFRIRRDGIAQILFSCNLIKCC-----G 64 Query: 429 NNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDGNRNGVLSYEDVEALTDEIDE 593 +K L P E E+ D D + + + I N+ Y EALTDEI+E Sbjct: 65 CDKLELGFPADDEQED---DDDDDHKELNDNII--NKVSDYDYGVAEALTDEIEE 114 >XP_014514874.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Vigna radiata var. radiata] Length = 446 Score = 56.6 bits (135), Expect = 5e-06 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 28/138 (20%) Frame = +3 Query: 282 SVEKWRKFF------------QXIMVAVFDCPKELKSRRDGIAQRLYS---SNCLHC--- 407 S++ WR +F IMVA DCP+E + RRDGIA+RL+S S CL C Sbjct: 8 SLDYWRNYFGAANSDIFGIIDHAIMVAASDCPEEFRMRRDGIAERLFSSRLSRCLGCERV 67 Query: 408 ----CLDYDDSNNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDG------NRNGVLSY 557 +D D K +E + + K ++S+D NR SY Sbjct: 68 ELSVPVDDDGGGCKNGF---EGTGAEFESEAGASKESKVNSASVDDPGVTNTNRASNYSY 124 Query: 558 EDVEALTDEIDERDADVQ 611 + EALTDEI+E V+ Sbjct: 125 GEAEALTDEIEEESQYVE 142 >EYU18603.1 hypothetical protein MIMGU_mgv1a006753mg [Erythranthe guttata] Length = 433 Score = 56.2 bits (134), Expect = 7e-06 Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 18/122 (14%) Frame = +3 Query: 282 SVEKWRKFFQX------------IMVAVFDCPKELKSRRDGIAQRLYSSNCLHCC-LDYD 422 S++KWR++F+ IMVA DCP + K +RD IA+ L++ C D Sbjct: 8 SLDKWREYFRSANSNIFGIIEHAIMVAASDCPYDFKLKRDRIAEMLFACKMTKCFGCDRI 67 Query: 423 DSNNKPSLVMPNSVESENRKKDFSDSYDKFPTSSIDGNRNGV-----LSYEDVEALTDEI 587 + +V+ S + R+ D D D +DG V SY D EALTDEI Sbjct: 68 ELAVPNGVVLEKSEDDNTREGDDDDDVD----DDVDGREMNVNHVSNYSYGDAEALTDEI 123 Query: 588 DE 593 +E Sbjct: 124 EE 125