BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00010072
         (431 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OMO89531.1 hypothetical protein CCACVL1_07779 [Corchorus capsula...    59   3e-07
XP_010055717.1 PREDICTED: probable mediator of RNA polymerase II...    54   8e-06

>OMO89531.1 hypothetical protein CCACVL1_07779 [Corchorus capsularis]
          Length = 459

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 46/173 (26%)
 Frame = -2

Query: 388 EEGLPSVPFDEGAFLSTHVSTQDIAELFETLDEDGNIISSRNKVEY----DDTKKPA--- 230
           EEGLPS P D GAF +T  ++ ++++ F+ +D+D N    RN  E+    D+ +KP+   
Sbjct: 253 EEGLPSPPLDIGAFFATQPTSMELSQFFDGMDDDEN---PRNSGEFIKNRDNRRKPSQEN 309

Query: 229 ----------------RVKHHSSQ-----------------NDNMGRPIYHDXXXXXXXX 149
                           R K   SQ                 N   GRP  HD        
Sbjct: 310 QNVSRRKQQTSSEANLRAKDERSQQMKRQEHVAKPNKPPSTNIGSGRPPKHD-------M 362

Query: 148 XXXXXXXXRVLNRS-KPTMPNYKFGSQRE-----TEQRKFEASKRRIQEGYQQ 8
                   ++LN+S K T+P     SQ++      E+RK EA+KR++QE YQQ
Sbjct: 363 EQKANIEPKLLNKSDKMTIPKKPLSSQQDKFKASDEERKLEATKRKLQERYQQ 415


>XP_010055717.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b [Eucalyptus grandis] KCW90010.1 hypothetical
           protein EUGRSUZ_A02206 [Eucalyptus grandis]
          Length = 457

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
 Frame = -2

Query: 421 QEQNESVNCDFEEGLPSVPFDEGAFLSTHVSTQDIAELFETLDEDGNI----ISSRNKVE 254
           +E+      + EEGLPS P DEGAFL  H ST +++  F+ +D+DGN      S++N+ E
Sbjct: 235 EEEEGEEEGEEEEGLPSPPLDEGAFLPPHTSTMELSRFFDGMDDDGNPRTGGESAKNR-E 293

Query: 253 YDDTKKPARVKHHSSQNDNMGRP 185
           Y   +KP++ K + S+     +P
Sbjct: 294 YG--RKPSQEKQNVSEQRRERKP 314