BLASTX nr result
ID: Ephedra29_contig00009751
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00009751
(535 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABK26542.1 unknown [Picea sitchensis] 161 1e-48
XP_004249138.1 PREDICTED: sm-like protein LSM36B [Solanum lycope... 160 5e-48
XP_016543963.1 PREDICTED: sm-like protein LSM36B [Capsicum annuum] 160 5e-48
XP_009603176.1 PREDICTED: sm-like protein LSM36B [Nicotiana tome... 160 5e-48
XP_006362264.1 PREDICTED: sm-like protein LSM36B [Solanum tubero... 160 5e-48
ABK22473.1 unknown [Picea sitchensis] 160 5e-48
XP_015089276.1 PREDICTED: sm-like protein LSM36B [Solanum pennel... 159 1e-47
XP_017632327.1 PREDICTED: sm-like protein LSM36B isoform X1 [Gos... 159 2e-47
XP_002311269.2 hypothetical protein POPTR_0008s07780g, partial [... 159 3e-47
XP_019703523.1 PREDICTED: U6 snRNA-associated Sm-like protein LS... 157 4e-47
KZV32245.1 hypothetical protein F511_29424 [Dorcoceras hygrometr... 157 4e-47
XP_004505465.1 PREDICTED: sm-like protein LSM36B [Cicer arietinu... 157 4e-47
AFK41314.1 unknown [Lotus japonicus] 157 4e-47
GAV83936.1 LSM domain-containing protein [Cephalotus follicularis] 157 4e-47
KYP64408.1 U6 snRNA-associated Sm-like protein LSm6 [Cajanus cajan] 157 4e-47
CDP08064.1 unnamed protein product [Coffea canephora] 157 4e-47
XP_002278412.1 PREDICTED: sm-like protein LSM36B [Vitis vinifera... 157 4e-47
XP_007139904.1 hypothetical protein PHAVU_008G068400g [Phaseolus... 157 4e-47
XP_003552377.1 PREDICTED: sm-like protein LSM6A [Glycine max] XP... 157 4e-47
XP_003607617.1 u6 snRNA-associated-like-Smprotein [Medicago trun... 157 4e-47
>ABK26542.1 unknown [Picea sitchensis]
Length = 91
Score = 161 bits (408), Expect = 1e-48
Identities = 79/80 (98%), Positives = 80/80 (100%)
Frame = -3
Query: 479 AKTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 300
AKTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF
Sbjct: 12 AKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 71
Query: 299 IRGNNVLYISTSKRTLGEGA 240
IRGNNVLYISTSKRTLGEGA
Sbjct: 72 IRGNNVLYISTSKRTLGEGA 91
>XP_004249138.1 PREDICTED: sm-like protein LSM36B [Solanum lycopersicum]
Length = 90
Score = 160 bits (404), Expect = 5e-48
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 12 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 71
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTLGEGA
Sbjct: 72 RGNNVLYISTSKRTLGEGA 90
>XP_016543963.1 PREDICTED: sm-like protein LSM36B [Capsicum annuum]
Length = 91
Score = 160 bits (404), Expect = 5e-48
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTLGEGA
Sbjct: 73 RGNNVLYISTSKRTLGEGA 91
>XP_009603176.1 PREDICTED: sm-like protein LSM36B [Nicotiana tomentosiformis]
XP_009777209.1 PREDICTED: U6 snRNA-associated Sm-like
protein LSm6 [Nicotiana sylvestris] XP_016471589.1
PREDICTED: sm-like protein LSM36B [Nicotiana tabacum]
XP_016471590.1 PREDICTED: sm-like protein LSM36B
[Nicotiana tabacum] XP_016435182.1 PREDICTED: sm-like
protein LSM36B [Nicotiana tabacum] XP_016435183.1
PREDICTED: sm-like protein LSM36B [Nicotiana tabacum]
XP_019254354.1 PREDICTED: sm-like protein LSM36B
[Nicotiana attenuata] XP_019254355.1 PREDICTED: sm-like
protein LSM36B [Nicotiana attenuata] OIS97670.1 sm-like
protein lsm36b [Nicotiana attenuata]
Length = 91
Score = 160 bits (404), Expect = 5e-48
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTLGEGA
Sbjct: 73 RGNNVLYISTSKRTLGEGA 91
>XP_006362264.1 PREDICTED: sm-like protein LSM36B [Solanum tuberosum]
Length = 91
Score = 160 bits (404), Expect = 5e-48
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTLGEGA
Sbjct: 73 RGNNVLYISTSKRTLGEGA 91
>ABK22473.1 unknown [Picea sitchensis]
Length = 91
Score = 160 bits (404), Expect = 5e-48
Identities = 78/80 (97%), Positives = 80/80 (100%)
Frame = -3
Query: 479 AKTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 300
AKTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF
Sbjct: 12 AKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 71
Query: 299 IRGNNVLYISTSKRTLGEGA 240
IRGNNVLYISTSKR+LGEGA
Sbjct: 72 IRGNNVLYISTSKRSLGEGA 91
>XP_015089276.1 PREDICTED: sm-like protein LSM36B [Solanum pennellii]
Length = 90
Score = 159 bits (401), Expect = 1e-47
Identities = 77/79 (97%), Positives = 79/79 (100%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 12 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 71
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSK+TLGEGA
Sbjct: 72 RGNNVLYISTSKKTLGEGA 90
>XP_017632327.1 PREDICTED: sm-like protein LSM36B isoform X1 [Gossypium arboreum]
Length = 110
Score = 159 bits (401), Expect = 2e-47
Identities = 79/94 (84%), Positives = 83/94 (88%)
Frame = -3
Query: 521 LRKMXXXXXXXXXSAKTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEE 342
+RKM + KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEE
Sbjct: 17 VRKMSTTGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEE 76
Query: 341 YVNGQLKNKYGDAFIRGNNVLYISTSKRTLGEGA 240
YVNGQLKNKYGDAFIRGNNVLYISTSKRTL +GA
Sbjct: 77 YVNGQLKNKYGDAFIRGNNVLYISTSKRTLADGA 110
>XP_002311269.2 hypothetical protein POPTR_0008s07780g, partial [Populus
trichocarpa] EEE88636.2 hypothetical protein
POPTR_0008s07780g, partial [Populus trichocarpa]
Length = 134
Score = 159 bits (403), Expect = 3e-47
Identities = 81/98 (82%), Positives = 85/98 (86%), Gaps = 2/98 (2%)
Frame = -3
Query: 527 WRLRK--MXXXXXXXXXSAKTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAME 354
W+LRK M + KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAME
Sbjct: 37 WQLRKKKMSTGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAME 96
Query: 353 QTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLGEGA 240
QTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTL +GA
Sbjct: 97 QTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLADGA 134
>XP_019703523.1 PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Elaeis
guineensis]
Length = 89
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 11 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 70
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL EGA
Sbjct: 71 RGNNVLYISTSKRTLAEGA 89
>KZV32245.1 hypothetical protein F511_29424 [Dorcoceras hygrometricum]
Length = 90
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 12 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 71
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL EGA
Sbjct: 72 RGNNVLYISTSKRTLAEGA 90
>XP_004505465.1 PREDICTED: sm-like protein LSM36B [Cicer arietinum] XP_004505466.1
PREDICTED: sm-like protein LSM36B [Cicer arietinum]
Length = 90
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 12 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 71
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL EGA
Sbjct: 72 RGNNVLYISTSKRTLAEGA 90
>AFK41314.1 unknown [Lotus japonicus]
Length = 90
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 12 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 71
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL EGA
Sbjct: 72 RGNNVLYISTSKRTLAEGA 90
>GAV83936.1 LSM domain-containing protein [Cephalotus follicularis]
Length = 91
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL +GA
Sbjct: 73 RGNNVLYISTSKRTLADGA 91
>KYP64408.1 U6 snRNA-associated Sm-like protein LSm6 [Cajanus cajan]
Length = 91
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL EGA
Sbjct: 73 RGNNVLYISTSKRTLAEGA 91
>CDP08064.1 unnamed protein product [Coffea canephora]
Length = 91
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL EGA
Sbjct: 73 RGNNVLYISTSKRTLAEGA 91
>XP_002278412.1 PREDICTED: sm-like protein LSM36B [Vitis vinifera] CBI24712.3
unnamed protein product, partial [Vitis vinifera]
Length = 91
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL EGA
Sbjct: 73 RGNNVLYISTSKRTLAEGA 91
>XP_007139904.1 hypothetical protein PHAVU_008G068400g [Phaseolus vulgaris]
XP_014497634.1 PREDICTED: sm-like protein LSM6A [Vigna
radiata var. radiata] XP_017416952.1 PREDICTED: sm-like
protein LSM6A [Vigna angularis] ESW11898.1 hypothetical
protein PHAVU_008G068400g [Phaseolus vulgaris]
KOM37140.1 hypothetical protein LR48_Vigan03g052100
[Vigna angularis]
Length = 91
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL EGA
Sbjct: 73 RGNNVLYISTSKRTLAEGA 91
>XP_003552377.1 PREDICTED: sm-like protein LSM6A [Glycine max] XP_014635027.1
PREDICTED: uncharacterized protein LOC100306112 isoform
X1 [Glycine max] KHM99405.1 U6 snRNA-associated Sm-like
protein LSm6 [Glycine soja] KHN29383.1 U6
snRNA-associated Sm-like protein LSm6 [Glycine soja]
KRH00694.1 hypothetical protein GLYMA_18G229600 [Glycine
max] KRH00695.1 hypothetical protein GLYMA_18G229600
[Glycine max] KRH40501.1 hypothetical protein
GLYMA_09G262700 [Glycine max]
Length = 91
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL EGA
Sbjct: 73 RGNNVLYISTSKRTLAEGA 91
>XP_003607617.1 u6 snRNA-associated-like-Smprotein [Medicago truncatula] AES89814.1
u6 snRNA-associated-like-Smprotein [Medicago truncatula]
AFK39181.1 unknown [Medicago truncatula]
Length = 91
Score = 157 bits (398), Expect = 4e-47
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = -3
Query: 476 KTPADFLKSIKGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 297
KTPADFLKSI+GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72
Query: 296 RGNNVLYISTSKRTLGEGA 240
RGNNVLYISTSKRTL EGA
Sbjct: 73 RGNNVLYISTSKRTLAEGA 91