BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00009712
         (1539 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAY37838.1 hypothetical protein MANES_11G133200 [Manihot esculenta]   196   4e-56
GAU48720.1 hypothetical protein TSUD_87180 [Trifolium subterraneum]   196   8e-56
KHN32110.1 RNA and export factor-binding protein 2 [Glycine soja]     195   2e-55
XP_014620021.1 PREDICTED: THO complex subunit 4A [Glycine max]        195   2e-55
XP_010043580.1 PREDICTED: THO complex subunit 4A [Eucalyptus gra...   194   3e-55
XP_006846043.1 PREDICTED: THO complex subunit 4A isoform X1 [Amb...   192   4e-54
XP_002284215.1 PREDICTED: THO complex subunit 4A [Vitis vinifera...   190   1e-53
XP_014619530.1 PREDICTED: THO complex subunit 4A-like [Glycine m...   190   1e-53
XP_012064998.1 PREDICTED: THO complex subunit 4A [Jatropha curca...   190   1e-53
XP_010253243.1 PREDICTED: THO complex subunit 4A-like isoform X1...   190   1e-53
XP_013456083.1 RNA and export factor-binding protein [Medicago t...   190   2e-53
XP_016170198.1 PREDICTED: THO complex subunit 4A [Arachis ipaensis]   189   3e-53
KHN21975.1 RNA and export factor-binding protein 2 [Glycine soja]     189   3e-53
XP_007027070.2 PREDICTED: THO complex subunit 4B [Theobroma cacao]    189   4e-53
XP_015935654.1 PREDICTED: THO complex subunit 4A [Arachis durane...   189   5e-53
KYP68209.1 RNA and export factor-binding protein 2 [Cajanus cajan]    189   5e-53
EOY07572.1 RNA-binding family protein [Theobroma cacao]               187   2e-52
XP_010685814.1 PREDICTED: THO complex subunit 4B isoform X1 [Bet...   185   9e-52
OMO66226.1 hypothetical protein CCACVL1_21260 [Corchorus capsula...   184   3e-51
XP_007205766.1 hypothetical protein PRUPE_ppa010358mg [Prunus pe...   184   3e-51

>OAY37838.1 hypothetical protein MANES_11G133200 [Manihot esculenta]
          Length = 239

 Score =  196 bits (499), Expect = 4e-56
 Identities = 118/253 (46%), Positives = 143/253 (56%), Gaps = 3/253 (1%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS++LDMSLDD+IK NKK    +                           R  +      
Sbjct: 1    MSSALDMSLDDIIKNNKKSGSGNARGRGRPSGPGPARRLA---------NRGANRAAPYT 51

Query: 528  FSKAPETTWQHDLF-DQDMADAGPSKLIKLETGTKVVISNLDYGVSNDDLKELFSEVGDL 704
             SKAPETTWQHD+F DQ MA     +   +ETGTK+ ISNLDYGVSN+D+KELFSEVGDL
Sbjct: 52   ASKAPETTWQHDMFTDQGMAYGQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDL 111

Query: 705  KRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSSTA--P 878
            KR+++HYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+++ A  P
Sbjct: 112  KRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAPP 171

Query: 879  SNLPSLPKGNWPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKSVEDLDA 1058
            +N  S    N                                        E  S EDLDA
Sbjct: 172  ANNVSFGNSN-----GVPRGGQGRGGTTGRPRGGGGRGFGRGRGRGRGRGEKVSAEDLDA 226

Query: 1059 ELENYHAEAMQTN 1097
            +LE YH+EAMQTN
Sbjct: 227  DLEKYHSEAMQTN 239


>GAU48720.1 hypothetical protein TSUD_87180 [Trifolium subterraneum]
          Length = 261

 Score =  196 bits (499), Expect = 8e-56
 Identities = 122/267 (45%), Positives = 145/267 (54%), Gaps = 17/267 (6%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS +LDM+LDD+IK NKK    +                      A  R+ P S      
Sbjct: 1    MSAALDMTLDDIIKNNKKSGSGNPRGRSRPGPGSGPGPARRLPNRAVNRSAPYSA----- 55

Query: 528  FSKAPETTWQHDLF-DQDMADAG----PSKLIKLETGTKVVISNLDYGVSNDDLKELFSE 692
              KAPETTWQHDL+ DQ +A A       +   +ETGTK+ ISNLDYGVSNDD+KELFSE
Sbjct: 56   -PKAPETTWQHDLYGDQHVAAAAFPAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSE 114

Query: 693  VGDLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSST 872
            VGDLKRH VHYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+S+ 
Sbjct: 115  VGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTP 174

Query: 873  APSNLPSLPKGNW------------PIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1016
              + + + P GN+             +                                 
Sbjct: 175  GAAPVVNAPIGNFNAVPQSGQGRIGDLRGPGGRGQGIRRNRGRGRGSGGGRGGGRGGGRG 234

Query: 1017 XXXXETKSVEDLDAELENYHAEAMQTN 1097
                E  S EDLDAELE YHAEAMQ N
Sbjct: 235  RGRDEKVSAEDLDAELEKYHAEAMQIN 261


>KHN32110.1 RNA and export factor-binding protein 2 [Glycine soja]
          Length = 247

 Score =  195 bits (495), Expect = 2e-55
 Identities = 120/269 (44%), Positives = 148/269 (55%), Gaps = 19/269 (7%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS ++DMSLDD+IK NKK                              RTRP  +  +R+
Sbjct: 1    MSAAMDMSLDDIIKNNKKSGSGSSRG----------------------RTRPSGSGPTRR 38

Query: 528  F-------------SKAPETTWQHDLF-DQDMADAG----PSKLIKLETGTKVVISNLDY 653
                          +KAPE TWQHDL+ DQ +A AG      +   +ETGTK+ ISNLDY
Sbjct: 39   LPNRAANRAAPYATAKAPEATWQHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDY 98

Query: 654  GVSNDDLKELFSEVGDLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKP 833
            GVSNDD+KELF+EVGDLKRH VHYDRSGRSKGT EVVF+RR DA +AV+RYNNVQLDGKP
Sbjct: 99   GVSNDDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKP 158

Query: 834  LRLEIAGTNLSSTAPSNLPSLPKGNW-PIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1010
            +++EI GTN+S+   +  P+   GN+  +                               
Sbjct: 159  MKIEIVGTNISTPGVAPAPNGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGR 218

Query: 1011 XXXXXXETKSVEDLDAELENYHAEAMQTN 1097
                  E  S +DLDA+LE YHAEAMQ N
Sbjct: 219  GGGGRGEKVSADDLDADLEKYHAEAMQLN 247


>XP_014620021.1 PREDICTED: THO complex subunit 4A [Glycine max]
          Length = 247

 Score =  195 bits (495), Expect = 2e-55
 Identities = 120/269 (44%), Positives = 148/269 (55%), Gaps = 19/269 (7%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS ++DMSLDD+IK NKK                              RTRP  +  +R+
Sbjct: 1    MSAAMDMSLDDIIKNNKKSGSGSSRG----------------------RTRPSGSGPTRR 38

Query: 528  F-------------SKAPETTWQHDLF-DQDMADAG----PSKLIKLETGTKVVISNLDY 653
                          +KAPE TWQHDL+ DQ +A AG      +   +ETGTK+ ISNLDY
Sbjct: 39   LPNRAANRAAPYAPAKAPEATWQHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDY 98

Query: 654  GVSNDDLKELFSEVGDLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKP 833
            GVSNDD+KELF+EVGDLKRH VHYDRSGRSKGT EVVF+RR DA +AV+RYNNVQLDGKP
Sbjct: 99   GVSNDDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKP 158

Query: 834  LRLEIAGTNLSSTAPSNLPSLPKGNW-PIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1010
            +++EI GTN+S+   +  P+   GN+  +                               
Sbjct: 159  MKIEIVGTNISTPGVAPAPNGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGR 218

Query: 1011 XXXXXXETKSVEDLDAELENYHAEAMQTN 1097
                  E  S +DLDA+LE YHAEAMQ N
Sbjct: 219  GGGGRGEKVSADDLDADLEKYHAEAMQLN 247


>XP_010043580.1 PREDICTED: THO complex subunit 4A [Eucalyptus grandis] KCW85598.1
            hypothetical protein EUGRSUZ_B02389 [Eucalyptus grandis]
            KCW85599.1 hypothetical protein EUGRSUZ_B02389
            [Eucalyptus grandis] KCW85600.1 hypothetical protein
            EUGRSUZ_B02389 [Eucalyptus grandis]
          Length = 252

 Score =  194 bits (494), Expect = 3e-55
 Identities = 120/264 (45%), Positives = 145/264 (54%), Gaps = 15/264 (5%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS++LDMSLDD+IK NKK                                RPP+   +R 
Sbjct: 1    MSSALDMSLDDIIKSNKKSGSGAPRSGGGRGRGGGGAASGPGPTR-----RPPNRAAARA 55

Query: 528  ----FSKAPETTWQHDLF-DQDMADAG-PSKLIKLETGTKVVISNLDYGVSNDDLKELFS 689
                  KAPETTWQHD+F DQ +   G P +   +ETGTK+ ISNLDYGVSN+D+KELFS
Sbjct: 56   NPYAAPKAPETTWQHDMFADQGLTFQGQPGRASAIETGTKLYISNLDYGVSNEDIKELFS 115

Query: 690  EVGDLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSS 869
            EVGDLKRH VHYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+++
Sbjct: 116  EVGDLKRHAVHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIAT 175

Query: 870  TAPS---------NLPSLPKGNWPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1022
             A +         NL   P+G                                       
Sbjct: 176  PAATPVISNGSFGNLNGFPRGG-------QARGGAIGRPRGGASGSGRRPAARGRGRGRG 228

Query: 1023 XXETKSVEDLDAELENYHAEAMQT 1094
              E  S EDLDA+LE YH+EAM+T
Sbjct: 229  RSEKVSAEDLDADLEKYHSEAMET 252


>XP_006846043.1 PREDICTED: THO complex subunit 4A isoform X1 [Amborella trichopoda]
            XP_011624053.1 PREDICTED: THO complex subunit 4A isoform
            X1 [Amborella trichopoda] ERN07718.1 hypothetical protein
            AMTR_s00012p00035940 [Amborella trichopoda]
          Length = 253

 Score =  192 bits (487), Expect = 4e-54
 Identities = 117/257 (45%), Positives = 141/257 (54%), Gaps = 7/257 (2%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS++LDMSLDDLIK NKK                                  P + M + 
Sbjct: 1    MSSALDMSLDDLIKNNKKSGGGGGGGVMRGRNRGGTSGPVRRIQNRTANRAAPYS-MGKA 59

Query: 528  FSKAPETTWQHDLFDQDMADAG--PSKLIKLETGTKVVISNLDYGVSNDDLKELFSEVGD 701
            F  APETTWQHDLF   +   G   ++   +ETGTK+ ISNLDYGVSN+D+KELFSEVGD
Sbjct: 60   FQAAPETTWQHDLFADPVGPYGVQAARPSAIETGTKLYISNLDYGVSNEDIKELFSEVGD 119

Query: 702  LKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSSTAP- 878
            LKR+++HYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTNL + AP 
Sbjct: 120  LKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNLVTPAPI 179

Query: 879  ----SNLPSLPKGNWPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKSVE 1046
                + L + P G   I                                     E  S  
Sbjct: 180  PQVANGLLATPNG---IPRSVQPRGAGIIGRGPRGGGRGGGRGRGRGGRGGGRGEKVSAA 236

Query: 1047 DLDAELENYHAEAMQTN 1097
            DLDA+LE YH+EAMQ N
Sbjct: 237  DLDADLEKYHSEAMQIN 253


>XP_002284215.1 PREDICTED: THO complex subunit 4A [Vitis vinifera] CBI16171.3 unnamed
            protein product, partial [Vitis vinifera]
          Length = 243

 Score =  190 bits (483), Expect = 1e-53
 Identities = 116/254 (45%), Positives = 145/254 (57%), Gaps = 4/254 (1%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MSN+LDMSLDDLIK NK+                                R  + +    
Sbjct: 1    MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLP--------NRGANRITPYS 52

Query: 528  FSKAPETTWQHDLFDQDMADAGPSKLIK---LETGTKVVISNLDYGVSNDDLKELFSEVG 698
             SKAPETTWQHD+F  D A A P++  +   +ETGTK+ ISNLDYGVSN+D+KELFSEVG
Sbjct: 53   VSKAPETTWQHDMF-ADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVG 111

Query: 699  DLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSSTAP 878
            DLKR+++HYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+++  P
Sbjct: 112  DLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIAT--P 169

Query: 879  SNLPSLPKGNW-PIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKSVEDLD 1055
            + +P +  G +                                        E  S EDLD
Sbjct: 170  AAVPPVTNGTFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLD 229

Query: 1056 AELENYHAEAMQTN 1097
            A+LE YH+EAMQ N
Sbjct: 230  ADLEKYHSEAMQIN 243


>XP_014619530.1 PREDICTED: THO complex subunit 4A-like [Glycine max] KRH29829.1
            hypothetical protein GLYMA_11G141500 [Glycine max]
            KRH29830.1 hypothetical protein GLYMA_11G141500 [Glycine
            max]
          Length = 247

 Score =  190 bits (483), Expect = 1e-53
 Identities = 119/269 (44%), Positives = 146/269 (54%), Gaps = 19/269 (7%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS ++DMSLDD+IK NKK                              R RP  +  SR+
Sbjct: 1    MSAAMDMSLDDIIKNNKKSGSGSSRG----------------------RIRPSGSGPSRR 38

Query: 528  F-------------SKAPETTWQHDLF-DQDMADAG----PSKLIKLETGTKVVISNLDY 653
            F             +KAPE TWQHDL+ DQ +A AG      +   +ETGTK+ ISNLDY
Sbjct: 39   FPNRAANRAAPYATAKAPEATWQHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDY 98

Query: 654  GVSNDDLKELFSEVGDLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKP 833
            GVS+DD+KELF+EVGDLKRH VHYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP
Sbjct: 99   GVSSDDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKP 158

Query: 834  LRLEIAGTNLSSTAPSNLPSLPKGNWP-IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1010
            +++EI GTN+S+   +   +   GN+  +                               
Sbjct: 159  MKIEIVGTNISTPGVAPARNGAIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGR 218

Query: 1011 XXXXXXETKSVEDLDAELENYHAEAMQTN 1097
                  E  S +DLDA+LE YHAEAMQ N
Sbjct: 219  GGAGRGEKVSADDLDADLEKYHAEAMQLN 247


>XP_012064998.1 PREDICTED: THO complex subunit 4A [Jatropha curcas] KDP44208.1
            hypothetical protein JCGZ_05675 [Jatropha curcas]
          Length = 248

 Score =  190 bits (483), Expect = 1e-53
 Identities = 121/260 (46%), Positives = 145/260 (55%), Gaps = 10/260 (3%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS++LDMSLDD+IK NKK  P                        A  R  P S      
Sbjct: 1    MSSALDMSLDDIIKSNKK--PGSGNSRGRGRASGPGPTRRFTNRVA-NRAAPYST----- 52

Query: 528  FSKAPETTWQHDLF-DQDMADAGPS-KLIKLETGTKVVISNLDYGVSNDDLKELFSEVGD 701
             +KAPETTWQHD+F DQ M  AG   +   +ETGTK+ ISNL+YGVSN+D+KELFSEVGD
Sbjct: 53   -AKAPETTWQHDMFTDQGMGYAGQGGRASAIETGTKLYISNLEYGVSNEDIKELFSEVGD 111

Query: 702  LKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSSTAPS 881
            LKR+T+HYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+++ A  
Sbjct: 112  LKRYTIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPA-- 169

Query: 882  NLPSLPKGNWPI--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETK 1037
              PS   G +                                               E  
Sbjct: 170  -APSAANGTFGSSNAVSRGGQGRGGAVGRQRGGSGGGRGFGRGRGRGRGGGGGGGRGEKV 228

Query: 1038 SVEDLDAELENYHAEAMQTN 1097
            S EDLDA+LE YH+EAMQTN
Sbjct: 229  SAEDLDADLEKYHSEAMQTN 248


>XP_010253243.1 PREDICTED: THO complex subunit 4A-like isoform X1 [Nelumbo nucifera]
          Length = 241

 Score =  190 bits (482), Expect = 1e-53
 Identities = 118/252 (46%), Positives = 142/252 (56%), Gaps = 2/252 (0%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS+SLDMSLDDLIK NKK   ++                         RT P S   S Q
Sbjct: 1    MSSSLDMSLDDLIKNNKKSGGSNFRGRGRGSGPGPARRAPNRGA---NRTTPYSMGKSVQ 57

Query: 528  FSKAPETTWQHDLFDQDMA--DAGPSKLIKLETGTKVVISNLDYGVSNDDLKELFSEVGD 701
               AP++ WQHD+F    A   A  S+   +ETGTK+ ISNLDYGVSNDD+KELFSEVGD
Sbjct: 58   ---APDSAWQHDMFTDQAAAYPAQASRASAIETGTKLYISNLDYGVSNDDIKELFSEVGD 114

Query: 702  LKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSSTAPS 881
            LKR+T+HYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+  T P+
Sbjct: 115  LKRYTIHYDRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEIVGTNV--TTPA 172

Query: 882  NLPSLPKGNWPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKSVEDLDAE 1061
              P+   G +                                       E  + EDLDA+
Sbjct: 173  VAPAATNGKF---GNPNSVPRSGQGRGGAIGRPRGRGFGRGRGRGRGRAEQITAEDLDAD 229

Query: 1062 LENYHAEAMQTN 1097
            LE YH+EAMQ N
Sbjct: 230  LEKYHSEAMQIN 241


>XP_013456083.1 RNA and export factor-binding protein [Medicago truncatula]
            KEH30114.1 RNA and export factor-binding protein
            [Medicago truncatula]
          Length = 263

 Score =  190 bits (483), Expect = 2e-53
 Identities = 122/269 (45%), Positives = 144/269 (53%), Gaps = 19/269 (7%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPP-NHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSR 524
            MS +LDM+LDD+IK NKK    N                       A  R  P S     
Sbjct: 1    MSAALDMTLDDIIKNNKKSGSGNPRGGRSRPGPASGPGPARRILNRAGNRAAPYSA---- 56

Query: 525  QFSKAPETTWQHDLF-DQDMADAG-----PSKLIKLETGTKVVISNLDYGVSNDDLKELF 686
              +KAPETTWQHDL+ DQ +A A        +   +ETGTK+ ISNLDYGVSNDD+KELF
Sbjct: 57   --AKAPETTWQHDLYADQHVAAAAYPAAQGGRAPSIETGTKLYISNLDYGVSNDDIKELF 114

Query: 687  SEVGDLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLS 866
            SEVGDLKRH VHYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+S
Sbjct: 115  SEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNIS 174

Query: 867  STAPSNLPSLPKGNW------------PIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1010
            +   + + + P GN+                                             
Sbjct: 175  TPGAAPVVNAPIGNFNGIPQSGQGRVGEFRGPGGRGQGIRRNRGRGRGSGGPRGGGRGGG 234

Query: 1011 XXXXXXETKSVEDLDAELENYHAEAMQTN 1097
                  +  S EDLDAELE YHAEAMQ N
Sbjct: 235  RGRGRDDKVSAEDLDAELEKYHAEAMQLN 263


>XP_016170198.1 PREDICTED: THO complex subunit 4A [Arachis ipaensis]
          Length = 246

 Score =  189 bits (480), Expect = 3e-53
 Identities = 115/255 (45%), Positives = 139/255 (54%), Gaps = 5/255 (1%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS +LDM+LDD+IK NKK                                R  + L    
Sbjct: 1    MSAALDMTLDDIIKNNKKSGSAGSRGRGRQSGSGPTRRFP---------NRAANRLAPYA 51

Query: 528  FSKAPETTWQHDLFDQDMADAGPS---KLIKLETGTKVVISNLDYGVSNDDLKELFSEVG 698
             +KAPET WQHDL+      A P+   +   +ETGTK+ ISNLDYGVSNDD+KELFSEVG
Sbjct: 52   TAKAPETAWQHDLYADQAVGAFPAQGGRASSIETGTKLYISNLDYGVSNDDIKELFSEVG 111

Query: 699  DLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSSTAP 878
            DLKRHTVHYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+++ A 
Sbjct: 112  DLKRHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNITTQAV 171

Query: 879  SNLPSLPKGNWPI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKSVEDL 1052
            +   +   GN  +                                       E  S EDL
Sbjct: 172  APAANGGFGNLGVVPRSGQGRSGGPLVRPRGGGSRGRGPPRRGRGRGRGRGGEKVSAEDL 231

Query: 1053 DAELENYHAEAMQTN 1097
            DA+LE YH+EAMQ N
Sbjct: 232  DADLEKYHSEAMQLN 246


>KHN21975.1 RNA and export factor-binding protein 2 [Glycine soja]
          Length = 247

 Score =  189 bits (480), Expect = 3e-53
 Identities = 118/269 (43%), Positives = 146/269 (54%), Gaps = 19/269 (7%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS ++DMSLDD+IK NKK                              RTRP  +  +R+
Sbjct: 1    MSAAMDMSLDDIIKNNKKSGSGSSRG----------------------RTRPSGSGPTRR 38

Query: 528  F-------------SKAPETTWQHDLF-DQDMADAG----PSKLIKLETGTKVVISNLDY 653
                          +KAPE TWQHDL+ DQ +A AG      +   +ETGTK+ ISNLDY
Sbjct: 39   LPNRAANRAAPYATAKAPEATWQHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDY 98

Query: 654  GVSNDDLKELFSEVGDLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKP 833
            GVS+DD+KELF+EVGDLKRH VHYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP
Sbjct: 99   GVSSDDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKP 158

Query: 834  LRLEIAGTNLSSTAPSNLPSLPKGNWP-IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1010
            +++EI GTN+S+   +   +   GN+  +                               
Sbjct: 159  MKIEIVGTNISTPGVAPARNGAIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGR 218

Query: 1011 XXXXXXETKSVEDLDAELENYHAEAMQTN 1097
                  E  S +DLDA+LE YHAEAMQ N
Sbjct: 219  GGAGRGEKVSADDLDADLEKYHAEAMQLN 247


>XP_007027070.2 PREDICTED: THO complex subunit 4B [Theobroma cacao]
          Length = 240

 Score =  189 bits (479), Expect = 4e-53
 Identities = 115/251 (45%), Positives = 140/251 (55%), Gaps = 2/251 (0%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            M+N LDMSLDDLIK N+K  P                        A  RT P S  +   
Sbjct: 1    MTNPLDMSLDDLIKSNRKSGPTRTRPPLNSGNGPSRRFPNR----AANRTAPYSKPV--- 53

Query: 528  FSKAPETTWQHDLFDQDMAD--AGPSKLIKLETGTKVVISNLDYGVSNDDLKELFSEVGD 701
              +AP+TTWQHD+F  D A   +   +   +ETGTK+ ISNLDYGVSN+D+KELFSEVGD
Sbjct: 54   --QAPDTTWQHDMFVDDGAGFPSAAGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGD 111

Query: 702  LKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSSTAPS 881
            +KR++VHYDRSGRSKGT EVVF+RR DA  A +RYN VQLDGKP+++EI GTN+++  P 
Sbjct: 112  MKRYSVHYDRSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIVGTNVAT--PV 169

Query: 882  NLPSLPKGNWPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKSVEDLDAE 1061
             LP    G +                                       E  S EDLDA+
Sbjct: 170  ALPLATNGKF-ANPNGVPRSGQGRGGFSGRSRGPGRGARRGRGQGRGQGEKVSAEDLDAD 228

Query: 1062 LENYHAEAMQT 1094
            LENYH EAMQT
Sbjct: 229  LENYHKEAMQT 239


>XP_015935654.1 PREDICTED: THO complex subunit 4A [Arachis duranensis]
          Length = 248

 Score =  189 bits (479), Expect = 5e-53
 Identities = 116/261 (44%), Positives = 140/261 (53%), Gaps = 11/261 (4%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS +LDM+LDD+IK NKK                                R  + L    
Sbjct: 1    MSAALDMTLDDIIKNNKKSGSAGSRGRGRQSGSGPGPTRRFP-------NRAANRLTPYA 53

Query: 528  FSKAPETTWQHDLFDQDMADAGPS---KLIKLETGTKVVISNLDYGVSNDDLKELFSEVG 698
             +KAPET WQHDL+      A P+   +   +ETGTK+ ISNLDYGVSNDD+KELFSEVG
Sbjct: 54   TAKAPETAWQHDLYADQAVGAFPAQGGRASSIETGTKLYISNLDYGVSNDDIKELFSEVG 113

Query: 699  DLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSSTAP 878
            DLKRHTVHYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+++ A 
Sbjct: 114  DLKRHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNITTQAV 173

Query: 879  S--------NLPSLPKGNWPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXET 1034
            +        NL  +P+                                          E 
Sbjct: 174  APAANGGFGNLGGVPRSG------QGRSGGPLVRPRGGGGRGRGPPRRGRGRGRGRGGEK 227

Query: 1035 KSVEDLDAELENYHAEAMQTN 1097
             S EDLDA+LE YH+EAMQ N
Sbjct: 228  VSAEDLDADLEKYHSEAMQLN 248


>KYP68209.1 RNA and export factor-binding protein 2 [Cajanus cajan]
          Length = 250

 Score =  189 bits (479), Expect = 5e-53
 Identities = 114/255 (44%), Positives = 142/255 (55%), Gaps = 6/255 (2%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            MS +LDM+LDD+IK NKK    +                      A  R  P S      
Sbjct: 1    MSAALDMTLDDIIKNNKKSGSGNSRGRGARTSRSGPGPSRRFSNRAANRAAPYST----- 55

Query: 528  FSKAPETTWQHDLF-DQDMADAG----PSKLIKLETGTKVVISNLDYGVSNDDLKELFSE 692
             +KAPE TWQHD++ DQ +A  G      +   +ETGTK+ ISNLD+GVSNDD+KELFSE
Sbjct: 56   -AKAPEATWQHDMYADQHVAVGGYPAQGGRAPSIETGTKLYISNLDFGVSNDDIKELFSE 114

Query: 693  VGDLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSST 872
            VGD+KRH VHYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+++ 
Sbjct: 115  VGDMKRHGVHYDRSGRSKGTAEVVFSRRSDAVAAVKRYNNVQLDGKPMKIEIVGTNIATP 174

Query: 873  APSNLPSLPKGNW-PIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKSVED 1049
              +   +   GN+  +                                     E  S ED
Sbjct: 175  GVAPATNGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSAED 234

Query: 1050 LDAELENYHAEAMQT 1094
            LDA+LE YH+EAMQT
Sbjct: 235  LDADLEKYHSEAMQT 249


>EOY07572.1 RNA-binding family protein [Theobroma cacao]
          Length = 240

 Score =  187 bits (474), Expect = 2e-52
 Identities = 118/268 (44%), Positives = 143/268 (53%), Gaps = 19/268 (7%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNL---M 518
            M+N LDMSLDDLIK N+K                              RTRPP N     
Sbjct: 1    MTNPLDMSLDDLIKSNRKS--------------------------GLTRTRPPLNSGNGP 34

Query: 519  SRQFS--------------KAPETTWQHDLFDQDMAD--AGPSKLIKLETGTKVVISNLD 650
            SR+F               +AP+TTWQHD+F  D A   +   +   +ETGTK+ ISNLD
Sbjct: 35   SRRFPNRAANRTAPYSKPVQAPDTTWQHDMFVDDGAGFPSAAGRASSIETGTKLYISNLD 94

Query: 651  YGVSNDDLKELFSEVGDLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGK 830
            YGVSN+D+KELFSEVGD+KR++VHYDRSGRSKGT EVVF+RR DA  A +RYN VQLDGK
Sbjct: 95   YGVSNEDIKELFSEVGDMKRYSVHYDRSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGK 154

Query: 831  PLRLEIAGTNLSSTAPSNLPSLPKGNWPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1010
            P+++EI GTN+++  P  LP    G +                                 
Sbjct: 155  PMKIEIVGTNVAT--PVALPPATNGKF-ANPNGVPRSGQGRGSFSGRSRGPGRGARRGRG 211

Query: 1011 XXXXXXETKSVEDLDAELENYHAEAMQT 1094
                  E  S EDLDA+LENYH EAMQT
Sbjct: 212  QGRGQGEKVSAEDLDADLENYHKEAMQT 239


>XP_010685814.1 PREDICTED: THO complex subunit 4B isoform X1 [Beta vulgaris subsp.
            vulgaris] KMT05296.1 hypothetical protein BVRB_7g174340
            [Beta vulgaris subsp. vulgaris]
          Length = 245

 Score =  185 bits (470), Expect = 9e-52
 Identities = 117/253 (46%), Positives = 139/253 (54%), Gaps = 3/253 (1%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXX--AFKRTRPPSNLMS 521
            M N L+MSLDDLIK+NK  P                           A  R+ P S  MS
Sbjct: 1    MENRLNMSLDDLIKINKSTPSRGGGGGGGGRGRGRSGPAPSRRFANRAVNRSTPYSMPMS 60

Query: 522  RQFSKAPETTWQHDLF-DQDMADAGPSKLIKLETGTKVVISNLDYGVSNDDLKELFSEVG 698
                KAP+T WQHD+F +Q    AG      +ETGTK+ ISNLDYGVSNDD+KELFSEVG
Sbjct: 61   ----KAPDTFWQHDMFGNQGGGGAGGVGASSIETGTKLYISNLDYGVSNDDIKELFSEVG 116

Query: 699  DLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSSTAP 878
            DLKR+ VHYDRSGRSKGT EVVF+RR D   AV+RYNNV+LDGKP+++EI GTN++  A 
Sbjct: 117  DLKRYAVHYDRSGRSKGTAEVVFSRRGDGLAAVKRYNNVELDGKPMKIEIVGTNMA--AA 174

Query: 879  SNLPSLPKGNWPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKSVEDLDA 1058
              LP  P  N                                        +  S +DLDA
Sbjct: 175  GMLP--PAANGIGRNPLGPRSGQGRGGAMGRPRGGRGTARGRGRGRGREDKVVSADDLDA 232

Query: 1059 ELENYHAEAMQTN 1097
            +LE YH+EAMQTN
Sbjct: 233  DLEKYHSEAMQTN 245


>OMO66226.1 hypothetical protein CCACVL1_21260 [Corchorus capsularis]
          Length = 240

 Score =  184 bits (466), Expect = 3e-51
 Identities = 112/251 (44%), Positives = 136/251 (54%), Gaps = 2/251 (0%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            M++ LDMSLDDLIK NKK  PN                       A  RT P S  +   
Sbjct: 1    MTSPLDMSLDDLIKSNKKPGPNRTRPPRGSGPGPSRRFPNR----AGNRTAPYSKPV--- 53

Query: 528  FSKAPETTWQHDLFDQDMA--DAGPSKLIKLETGTKVVISNLDYGVSNDDLKELFSEVGD 701
              +AP+  WQHD+F  D A   A P +   LETGTK+ ISNLD+GVS +D+KELF EVGD
Sbjct: 54   --QAPDAAWQHDMFVDDGAGFSAAPGRASSLETGTKIYISNLDFGVSTEDIKELFQEVGD 111

Query: 702  LKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSSTAPS 881
            +KR+ +HYDRSGRSKGT EVVF+RR DA  A +RYN VQLDGKP+++EI GTN+++  P 
Sbjct: 112  VKRYAIHYDRSGRSKGTAEVVFSRRSDAAAAFKRYNGVQLDGKPMKIEIVGTNIAT--PG 169

Query: 882  NLPSLPKGNWPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKSVEDLDAE 1061
              P    G +                                       E  S EDLDA+
Sbjct: 170  AGPHATNGKF-ANQNGAPRSGQGRGGFSGRSRGRGRGGRRGRGRGRAQGEKVSAEDLDAD 228

Query: 1062 LENYHAEAMQT 1094
            LENYH EAMQT
Sbjct: 229  LENYHKEAMQT 239


>XP_007205766.1 hypothetical protein PRUPE_ppa010358mg [Prunus persica] ONI00311.1
            hypothetical protein PRUPE_6G081700 [Prunus persica]
            ONI00312.1 hypothetical protein PRUPE_6G081700 [Prunus
            persica] ONI00313.1 hypothetical protein PRUPE_6G081700
            [Prunus persica] ONI00314.1 hypothetical protein
            PRUPE_6G081700 [Prunus persica]
          Length = 252

 Score =  184 bits (467), Expect = 3e-51
 Identities = 118/260 (45%), Positives = 141/260 (54%), Gaps = 12/260 (4%)
 Frame = +3

Query: 348  MSNSLDMSLDDLIKMNKKQPPNHXXXXXXXXXXXXXXXXXXXXXXAFKRTRPPSNLMSRQ 527
            M + L+MSLDDLIK +KK    +                      A  RT P +      
Sbjct: 1    MQDPLNMSLDDLIKTSKKSGSGNARGRGRASGPGPARRLPNR---AANRTTPYAA----- 52

Query: 528  FSKAPETTWQHDLFDQDMADAGPSKLIK---LETGTKVVISNLDYGVSNDDLKELFSEVG 698
             +KAPET WQHDL+    A A P++  +   +ETGTK+ ISNLDYGVSN+D+KELFSEVG
Sbjct: 53   -AKAPETAWQHDLYTDQGAAAFPAQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVG 111

Query: 699  DLKRHTVHYDRSGRSKGTGEVVFARRIDAENAVRRYNNVQLDGKPLRLEIAGTNLSST-A 875
            DLKR+ VHYDRSGRSKGT EVVF+RR DA  AV+RYNNVQLDGKP+++EI GTN+S+   
Sbjct: 112  DLKRYGVHYDRSGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGG 171

Query: 876  PSNLPSLPKGNWPI--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 1031
            P  LP    GN+                                               E
Sbjct: 172  PPTLPPAANGNFGNSNGVPRGGQSRGGAFGRIRGGGGRGPRRGGRGRGSGNGGGRGRGGE 231

Query: 1032 TKSVEDLDAELENYHAEAMQ 1091
              S EDLDAELE YHAEAMQ
Sbjct: 232  KVSAEDLDAELEKYHAEAMQ 251