BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00009632
         (1575 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ADE76416.1 unknown [Picea sitchensis]                                 478   e-163
EAZ01977.1 hypothetical protein OsI_24011 [Oryza sativa Indica G...   397   e-131
XP_015641321.1 PREDICTED: tRNA pseudouridine synthase A [Oryza s...   397   e-131
BAD45865.1 pseudouridylate synthase-like [Oryza sativa Japonica ...   397   e-130
XP_012460251.1 PREDICTED: uncharacterized protein LOC105780451 i...   392   e-129
XP_011094040.1 PREDICTED: uncharacterized protein LOC105173848 i...   390   e-128
XP_004137363.1 PREDICTED: uncharacterized protein LOC101205562 [...   390   e-128
XP_012460252.1 PREDICTED: uncharacterized protein LOC105780451 i...   389   e-128
XP_012084292.1 PREDICTED: uncharacterized protein LOC105643709 [...   387   e-127
OAY58979.1 hypothetical protein MANES_02G221700 [Manihot esculenta]   387   e-127
KMZ71087.1 tRNA pseudouridine synthase A [Zostera marina]             387   e-127
XP_016680541.1 PREDICTED: tRNA pseudouridine synthase A-like [Go...   386   e-127
XP_011625774.1 PREDICTED: uncharacterized protein LOC18440774 [A...   386   e-126
KXG20542.1 hypothetical protein SORBI_010G219000 [Sorghum bicolo...   387   e-126
XP_004965639.1 PREDICTED: tRNA pseudouridine synthase A [Setaria...   384   e-126
XP_017615457.1 PREDICTED: tRNA pseudouridine synthase A isoform ...   385   e-126
XP_016738486.1 PREDICTED: tRNA pseudouridine synthase A-like iso...   385   e-126
XP_006656336.2 PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridin...   384   e-126
XP_015881730.1 PREDICTED: tRNA pseudouridine synthase A [Ziziphu...   384   e-126
XP_016738487.1 PREDICTED: tRNA pseudouridine synthase A-like iso...   384   e-126

>ADE76416.1 unknown [Picea sitchensis]
          Length = 448

 Score =  478 bits (1231), Expect = e-163
 Identities = 247/426 (57%), Positives = 297/426 (69%), Gaps = 23/426 (5%)
 Frame = +2

Query: 134  SEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLLAGHLSLNDLVFH 313
            ++ D    HVHYDHQD C++ RWTAKESY YLY+RPW+++ +FYSHL AG LSL+DLVFH
Sbjct: 26   TDVDNEKPHVHYDHQDDCREFRWTAKESYAYLYDRPWEEVMDFYSHLAAGRLSLSDLVFH 85

Query: 314  --RNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSYFDGWQKQP 487
              +   V R  G                 KK +GGKW RRTFKI+LSYDG+ FDGWQKQP
Sbjct: 86   ESKKGNVARPYGNAAVPSCTGILLENNS-KKPKGGKWARRTFKIVLSYDGNLFDGWQKQP 144

Query: 488  GLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQVCSFYTWRK 667
            G+NTVQGL+EK+LGKFV  KK +ELEAK   +EAA++VAGRTDKGVSA  QVCSFYTWRK
Sbjct: 145  GMNTVQGLVEKSLGKFVDEKKAQELEAKKASVEAAVAVAGRTDKGVSAFQQVCSFYTWRK 204

Query: 668  DVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEGEG------- 826
            D +  ++E+EIN  A   LKV S+ EV REFHPNFSAKWRRYLYILPL +GEG       
Sbjct: 205  DTSLEDIESEINAAALGKLKVVSISEVSREFHPNFSAKWRRYLYILPLKDGEGNKTVVDG 264

Query: 827  ------DGMC--------NSTKEILKMEKVSATAESECKQLNKPYNFDVALVNQFLQQLE 964
                  D +C        ++   ++ ME ++ +A  + +   KP+NF+V  VNQ LQQLE
Sbjct: 265  GSPVTYDSLCLADEGGNQSTDMNVINMEAMNISATGKHQASVKPHNFNVDTVNQLLQQLE 324

Query: 965  GRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVMCVELVANR 1144
            G+SLSY+IFARDTQASRS GPATEC ++HARAAVATLP +G+D   + + VMCVELVANR
Sbjct: 325  GQSLSYRIFARDTQASRSRGPATECFMHHARAAVATLPYMGQDHTSKGRTVMCVELVANR 384

Query: 1145 FLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNE 1324
            FLRKM                 P+  L LM ATCRRASAPPAPP+GLCLVD+GY DIN E
Sbjct: 385  FLRKMVRVLVATAVREAAAGATPDNLLKLMHATCRRASAPPAPPEGLCLVDIGYTDINQE 444

Query: 1325 NSIFLI 1342
            N  FLI
Sbjct: 445  N--FLI 448


>EAZ01977.1 hypothetical protein OsI_24011 [Oryza sativa Indica Group] EAZ37905.1
            hypothetical protein OsJ_22255 [Oryza sativa Japonica
            Group]
          Length = 417

 Score =  397 bits (1020), Expect = e-131
 Identities = 213/408 (52%), Positives = 264/408 (64%), Gaps = 4/408 (0%)
 Frame = +2

Query: 113  ITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLL---AG 283
            ++  T  +E D   +H HY+H D C  LRWTAKESYEY+Y RPW  + +FY+ L+   AG
Sbjct: 18   LSFSTAAAEGD---EHAHYNHTDACHHLRWTAKESYEYMYARPWSRVVDFYAELVRTGAG 74

Query: 284  HLSLNDLVFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSY 463
               L DL F ++                       +  KDRGG+W+R TFKI+LSY G  
Sbjct: 75   AAGLADL-FGKDENGYSLDTNGEDYTAPSENQTSTKSSKDRGGRWERVTFKIVLSYHGGS 133

Query: 464  FDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQV 643
            FDGWQKQPGLNTVQGL+EK LG+FV  KK K+LEA+ +P+E    VAGRTDKGV+AL QV
Sbjct: 134  FDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLEARSLPLEGCAVVAGRTDKGVTALQQV 193

Query: 644  CSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEGE 823
            CSFYTWRKDV + +++  IN  A + L+   V +V REFHPNF+AKWRRYLYI PL E  
Sbjct: 194  CSFYTWRKDVKSSDIKDAINKAAPDKLRPLHVSQVSREFHPNFAAKWRRYLYIFPLDE-- 251

Query: 824  GDGMCNSTKEILKMEKVSATAES-ECKQLNKPYNFDVALVNQFLQQLEGRSLSYKIFARD 1000
                    K I   E+ + T E  EC    KP +FDV  V++ ++QLEG+SLSYK+FARD
Sbjct: 252  ------DVKLISGEEQSAKTVEGPECN--IKPQSFDVGKVDKIIRQLEGKSLSYKMFARD 303

Query: 1001 TQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVMCVELVANRFLRKMXXXXXXX 1180
            TQASRS GP TEC ++H+RAAVA L    ++    T   +C+ELVANRFLRKM       
Sbjct: 304  TQASRSVGPPTECFMFHSRAAVAKLHTADENCEEGTTRAICIELVANRFLRKMVRVLVAT 363

Query: 1181 XXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNE 1324
                     + +  LNLMEATCRRA+APPAPPDGLCLVDVGYED N +
Sbjct: 364  AIREAAAGAEEDALLNLMEATCRRATAPPAPPDGLCLVDVGYEDFNRQ 411


>XP_015641321.1 PREDICTED: tRNA pseudouridine synthase A [Oryza sativa Japonica
            Group]
          Length = 425

 Score =  397 bits (1020), Expect = e-131
 Identities = 213/408 (52%), Positives = 264/408 (64%), Gaps = 4/408 (0%)
 Frame = +2

Query: 113  ITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLL---AG 283
            ++  T  +E D   +H HY+H D C  LRWTAKESYEY+Y RPW  + +FY+ L+   AG
Sbjct: 26   LSFSTAAAEGD---EHAHYNHTDACHHLRWTAKESYEYMYARPWSRVVDFYAELVRTGAG 82

Query: 284  HLSLNDLVFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSY 463
               L DL F ++                       +  KDRGG+W+R TFKI+LSY G  
Sbjct: 83   AAGLADL-FGKDENGYSLDTNGEDYTAPSENQTSTKSSKDRGGRWERVTFKIVLSYHGGS 141

Query: 464  FDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQV 643
            FDGWQKQPGLNTVQGL+EK LG+FV  KK K+LEA+ +P+E    VAGRTDKGV+AL QV
Sbjct: 142  FDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLEARSLPLEGCAVVAGRTDKGVTALQQV 201

Query: 644  CSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEGE 823
            CSFYTWRKDV + +++  IN  A + L+   V +V REFHPNF+AKWRRYLYI PL E  
Sbjct: 202  CSFYTWRKDVKSSDIKDAINKAAPDKLRPLHVSQVSREFHPNFAAKWRRYLYIFPLDE-- 259

Query: 824  GDGMCNSTKEILKMEKVSATAES-ECKQLNKPYNFDVALVNQFLQQLEGRSLSYKIFARD 1000
                    K I   E+ + T E  EC    KP +FDV  V++ ++QLEG+SLSYK+FARD
Sbjct: 260  ------DVKLISGEEQSAKTVEGPECN--IKPQSFDVGKVDKIIRQLEGKSLSYKMFARD 311

Query: 1001 TQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVMCVELVANRFLRKMXXXXXXX 1180
            TQASRS GP TEC ++H+RAAVA L    ++    T   +C+ELVANRFLRKM       
Sbjct: 312  TQASRSVGPPTECFMFHSRAAVAKLHTADENCEEGTTRAICIELVANRFLRKMVRVLVAT 371

Query: 1181 XXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNE 1324
                     + +  LNLMEATCRRA+APPAPPDGLCLVDVGYED N +
Sbjct: 372  AIREAAAGAEEDALLNLMEATCRRATAPPAPPDGLCLVDVGYEDFNRQ 419


>BAD45865.1 pseudouridylate synthase-like [Oryza sativa Japonica Group]
          Length = 495

 Score =  397 bits (1020), Expect = e-130
 Identities = 213/408 (52%), Positives = 264/408 (64%), Gaps = 4/408 (0%)
 Frame = +2

Query: 113  ITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLL---AG 283
            ++  T  +E D   +H HY+H D C  LRWTAKESYEY+Y RPW  + +FY+ L+   AG
Sbjct: 18   LSFSTAAAEGD---EHAHYNHTDACHHLRWTAKESYEYMYARPWSRVVDFYAELVRTGAG 74

Query: 284  HLSLNDLVFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSY 463
               L DL F ++                       +  KDRGG+W+R TFKI+LSY G  
Sbjct: 75   AAGLADL-FGKDENGYSLDTNGEDYTAPSENQTSTKSSKDRGGRWERVTFKIVLSYHGGS 133

Query: 464  FDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQV 643
            FDGWQKQPGLNTVQGL+EK LG+FV  KK K+LEA+ +P+E    VAGRTDKGV+AL QV
Sbjct: 134  FDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLEARSLPLEGCAVVAGRTDKGVTALQQV 193

Query: 644  CSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEGE 823
            CSFYTWRKDV + +++  IN  A + L+   V +V REFHPNF+AKWRRYLYI PL E  
Sbjct: 194  CSFYTWRKDVKSSDIKDAINKAAPDKLRPLHVSQVSREFHPNFAAKWRRYLYIFPLDE-- 251

Query: 824  GDGMCNSTKEILKMEKVSATAES-ECKQLNKPYNFDVALVNQFLQQLEGRSLSYKIFARD 1000
                    K I   E+ + T E  EC    KP +FDV  V++ ++QLEG+SLSYK+FARD
Sbjct: 252  ------DVKLISGEEQSAKTVEGPECN--IKPQSFDVGKVDKIIRQLEGKSLSYKMFARD 303

Query: 1001 TQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVMCVELVANRFLRKMXXXXXXX 1180
            TQASRS GP TEC ++H+RAAVA L    ++    T   +C+ELVANRFLRKM       
Sbjct: 304  TQASRSVGPPTECFMFHSRAAVAKLHTADENCEEGTTRAICIELVANRFLRKMVRVLVAT 363

Query: 1181 XXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNE 1324
                     + +  LNLMEATCRRA+APPAPPDGLCLVDVGYED N +
Sbjct: 364  AIREAAAGAEEDALLNLMEATCRRATAPPAPPDGLCLVDVGYEDFNRQ 411


>XP_012460251.1 PREDICTED: uncharacterized protein LOC105780451 isoform X1 [Gossypium
            raimondii] KJB76616.1 hypothetical protein
            B456_012G097600 [Gossypium raimondii]
          Length = 452

 Score =  392 bits (1008), Expect = e-129
 Identities = 207/442 (46%), Positives = 271/442 (61%), Gaps = 23/442 (5%)
 Frame = +2

Query: 77   LSRETRTSATTKITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQ 256
            + +E R      +   ++   Q     + HY+H D C   RWTA+ESY+++Y RPW+D+ 
Sbjct: 14   IGKEKRLGRFRDLVSLSSMENQTKNKIYFHYNHTDSCNSARWTARESYQFMYERPWQDVL 73

Query: 257  NFYSHLLAGHLSLNDLVFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFK 436
            +F+S+++   L+L+ +    N     TC   +              K++R G+W+R TFK
Sbjct: 74   HFFSNVVNARLTLSTMFGTDNGPQVSTCIDVVDDDYKTSEVCDE--KEERCGRWERVTFK 131

Query: 437  ILLSYDGSYFDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTD 616
            I+LSY G  FDGWQKQPGLNTVQ ++EK+LG+FV +KK + L+ K  P+E    VAGRTD
Sbjct: 132  IILSYSGYAFDGWQKQPGLNTVQEIVEKSLGRFVDDKKARLLKEKSKPLEGCAVVAGRTD 191

Query: 617  KGVSALHQVCSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYL 796
            KGVSA+ QVCSFYTWRKDV   ++E EIN+ A   L+V SV EV R FHPNFSAKWRRYL
Sbjct: 192  KGVSAIRQVCSFYTWRKDVKPCDIEGEINSAAPGKLRVVSVSEVSRVFHPNFSAKWRRYL 251

Query: 797  YILPLHEGEGDGM-CNSTKEI----------------------LKMEKVSATAESECKQL 907
            YI PL++ E +   C + KE+                        +E +      E +  
Sbjct: 252  YIFPLNDQENEKQCCENEKEVESFSFARNCNEPSNKCVESSSSENVENLIFGNNKEFEAP 311

Query: 908  NKPYNFDVALVNQFLQQLEGRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIG 1087
            NKP  F V  VNQ L+ LEG+ LSYK+FARDT+ASR+ GP TEC +YHARAA A +PC+ 
Sbjct: 312  NKPTCFSVCRVNQLLRHLEGKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCLV 371

Query: 1088 KDDGHRTKNVMCVELVANRFLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPP 1267
             ++G   + VMCVELVANRFLRKM                + +  L LMEATCRRA+APP
Sbjct: 372  HEEG---RKVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMEATCRRATAPP 428

Query: 1268 APPDGLCLVDVGYEDINNENSI 1333
            APPDGLCLVDVGY D N +N +
Sbjct: 429  APPDGLCLVDVGYTDFNPKNCL 450


>XP_011094040.1 PREDICTED: uncharacterized protein LOC105173848 isoform X1 [Sesamum
            indicum]
          Length = 426

 Score =  390 bits (1003), Expect = e-128
 Identities = 212/431 (49%), Positives = 265/431 (61%), Gaps = 25/431 (5%)
 Frame = +2

Query: 116  TMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLLAGHLSL 295
            ++P  P  +DY    VHY H D C   RWTAKESY+++Y +PW+ + + Y  ++ G LSL
Sbjct: 10   SLPPPPPPKDY----VHYHHTDACSFSRWTAKESYQFMYGKPWQKVTDLYLDVVNGRLSL 65

Query: 296  NDL------VFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDG 457
            ++L           AE+ + C                    DR G+W R TFKILLSY G
Sbjct: 66   SELFGKETYAVDGGAEIVKDCDKS---------ELVRNPAGDRTGRWARVTFKILLSYHG 116

Query: 458  SYFDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALH 637
            S FDGWQKQPGLNTVQGL+E++LGKFV  KKV+ L+ K +PI+    VAGRTDKGV+AL 
Sbjct: 117  SSFDGWQKQPGLNTVQGLIERSLGKFVDEKKVQLLKEKKLPIDGCAVVAGRTDKGVTALE 176

Query: 638  QVCSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLH- 814
            QVCSFYTWRKDVTA+E++  +N  A   ++V SV  V REFHPNFSAKWRRYLYI P + 
Sbjct: 177  QVCSFYTWRKDVTAVEIKDAVNGAAPGKIRVISVSPVSREFHPNFSAKWRRYLYIFPFND 236

Query: 815  EGEGDGMCNSTKEILKMEKVSATAESEC------------------KQLNKPYNFDVALV 940
            E   D    S K +L +         EC                  +  NKP  F+++ V
Sbjct: 237  ENMDDKEGQSKKNVLDVTVRREGQYGECFHEENCARVTDGDDQHESQTRNKPLTFEISRV 296

Query: 941  NQFLQQLEGRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVM 1120
            N  L QLEG+ LS+++FARDT+ASR+ GP TEC +YHARAA A LPC    DG RTK  M
Sbjct: 297  NHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFLYHARAAEAYLPC--SKDGTRTK-TM 353

Query: 1121 CVELVANRFLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDV 1300
            C+ELVANRFLRKM                D +  L LM+ATCRRA+APPAPPDGLCLVDV
Sbjct: 354  CIELVANRFLRKMVRVLVATAIREAAAGADDDALLKLMDATCRRATAPPAPPDGLCLVDV 413

Query: 1301 GYEDINNENSI 1333
            GY + + +N +
Sbjct: 414  GYTEFDRKNCL 424


>XP_004137363.1 PREDICTED: uncharacterized protein LOC101205562 [Cucumis sativus]
            KGN63901.1 hypothetical protein Csa_1G025830 [Cucumis
            sativus]
          Length = 444

 Score =  390 bits (1002), Expect = e-128
 Identities = 209/435 (48%), Positives = 272/435 (62%), Gaps = 23/435 (5%)
 Frame = +2

Query: 110  KITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLLAGHL 289
            KI M      +DY    +HY+H D C+  RWTA+ESY+++Y RPW+++ +FYSH + G  
Sbjct: 20   KILMENRAQRKDY----LHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRF 75

Query: 290  SLNDLVFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSYFD 469
            SL+ L+     E+ R                     KD+ G+W R TFKI+LSYDG+ FD
Sbjct: 76   SLSSLL---GTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFD 132

Query: 470  GWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQVCS 649
            GWQKQPGLNTVQGL+E++LGKFV  KK + L+ K +P+E    VAGRTDKGV+AL QVCS
Sbjct: 133  GWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCS 192

Query: 650  FYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEGEGD 829
            FYTWR DV   ++E  IN+ A   L+ +SV +V R FHPNFSAKWRRYLYILPL++GE  
Sbjct: 193  FYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENM 252

Query: 830  GMCNSTKE---------ILKMEK--------------VSATAESECKQLNKPYNFDVALV 940
               ++T E          +K+E               V +  + E    +KP  F +  V
Sbjct: 253  EPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDQELVSADKPQTFSITRV 312

Query: 941  NQFLQQLEGRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVM 1120
            NQ L++LEG+ LSYK+FARDT+ASR+ GP TEC +YHARAA   LPC+ +  G   ++VM
Sbjct: 313  NQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQGVG---RSVM 369

Query: 1121 CVELVANRFLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDV 1300
            CVELVANRFLRKM                  +  L LM+ATCRRA+APPAPPDGL LVDV
Sbjct: 370  CVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDV 429

Query: 1301 GYEDINNENSIFLIN 1345
            GY D +++   F++N
Sbjct: 430  GYTDFDSQ-ICFILN 443


>XP_012460252.1 PREDICTED: uncharacterized protein LOC105780451 isoform X2 [Gossypium
            raimondii] KJB76613.1 hypothetical protein
            B456_012G097600 [Gossypium raimondii]
          Length = 450

 Score =  389 bits (999), Expect = e-128
 Identities = 207/442 (46%), Positives = 272/442 (61%), Gaps = 23/442 (5%)
 Frame = +2

Query: 77   LSRETRTSATTKITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQ 256
            + +E R      +   ++   Q     + HY+H D C   RWTA+ESY+++Y RPW+D+ 
Sbjct: 14   IGKEKRLGRFRDLVSLSSMENQTKNKIYFHYNHTDSCNSARWTARESYQFMYERPWQDVL 73

Query: 257  NFYSHLLAGHLSLNDLVFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFK 436
            +F+S+++   L+L+ +    N    +TC   +              K++R G+W+R TFK
Sbjct: 74   HFFSNVVNARLTLSTMFGTDNGP--QTCIDVVDDDYKTSEVCDE--KEERCGRWERVTFK 129

Query: 437  ILLSYDGSYFDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTD 616
            I+LSY G  FDGWQKQPGLNTVQ ++EK+LG+FV +KK + L+ K  P+E    VAGRTD
Sbjct: 130  IILSYSGYAFDGWQKQPGLNTVQEIVEKSLGRFVDDKKARLLKEKSKPLEGCAVVAGRTD 189

Query: 617  KGVSALHQVCSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYL 796
            KGVSA+ QVCSFYTWRKDV   ++E EIN+ A   L+V SV EV R FHPNFSAKWRRYL
Sbjct: 190  KGVSAIRQVCSFYTWRKDVKPCDIEGEINSAAPGKLRVVSVSEVSRVFHPNFSAKWRRYL 249

Query: 797  YILPLHEGEGDGM-CNSTKEI----------------------LKMEKVSATAESECKQL 907
            YI PL++ E +   C + KE+                        +E +      E +  
Sbjct: 250  YIFPLNDQENEKQCCENEKEVESFSFARNCNEPSNKCVESSSSENVENLIFGNNKEFEAP 309

Query: 908  NKPYNFDVALVNQFLQQLEGRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIG 1087
            NKP  F V  VNQ L+ LEG+ LSYK+FARDT+ASR+ GP TEC +YHARAA A +PC+ 
Sbjct: 310  NKPTCFSVCRVNQLLRHLEGKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCLV 369

Query: 1088 KDDGHRTKNVMCVELVANRFLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPP 1267
             ++G   + VMCVELVANRFLRKM                + +  L LMEATCRRA+APP
Sbjct: 370  HEEG---RKVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMEATCRRATAPP 426

Query: 1268 APPDGLCLVDVGYEDINNENSI 1333
            APPDGLCLVDVGY D N +N +
Sbjct: 427  APPDGLCLVDVGYTDFNPKNCL 448


>XP_012084292.1 PREDICTED: uncharacterized protein LOC105643709 [Jatropha curcas]
            KDP27752.1 hypothetical protein JCGZ_19781 [Jatropha
            curcas]
          Length = 447

 Score =  387 bits (994), Expect = e-127
 Identities = 208/414 (50%), Positives = 264/414 (63%), Gaps = 22/414 (5%)
 Frame = +2

Query: 158  HVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLLAGHLSLNDLV------FHRN 319
            +VHY+H D CK LRWTA+ES++++Y RPW+++  FYS+++ GHLSL++L        H N
Sbjct: 44   YVHYNHTDSCKFLRWTARESFQFMYARPWEEVVEFYSNVVNGHLSLSELFGTQIHFAHDN 103

Query: 320  AEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSYFDGWQKQPGLNT 499
            A++  +                    KD+ G+W R TFKI+LSY G+ FDGWQKQPGLNT
Sbjct: 104  AKIQDS---------FVESKLEDFSDKDKFGRWARVTFKIVLSYHGASFDGWQKQPGLNT 154

Query: 500  VQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQVCSFYTWRKDVTA 679
            VQGL+E++LG FV  KK ++L+ K  P+E    VAGRTDKGVSA  Q+CSFYTWRKDV  
Sbjct: 155  VQGLVERSLGTFVDEKKSQQLKDKCKPLEGCAVVAGRTDKGVSAFQQICSFYTWRKDVRP 214

Query: 680  LEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEGEG----------- 826
             E+E  IN+ A   L+V SV EV R FHPNFSAKWRRYLYI PL++GE            
Sbjct: 215  HEIEDAINSSAPGKLRVVSVSEVSRAFHPNFSAKWRRYLYIFPLNDGENGEDVENFSSHD 274

Query: 827  --DGMCNSTKEILKMEKVSAT---AESECKQLNKPYNFDVALVNQFLQQLEGRSLSYKIF 991
              D     + E+   EK+  +    + E +   KP  F V  VNQ LQQLEG+ LSYKIF
Sbjct: 275  KYDEQRPGSGELTSKEKLDESFIIDKDEPEGTIKPRTFSVCRVNQLLQQLEGKLLSYKIF 334

Query: 992  ARDTQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVMCVELVANRFLRKMXXXX 1171
            ARDT+ASR+ GP TEC IYHARA    LPC    D  + + V+C+ELVANRFLRKM    
Sbjct: 335  ARDTKASRNEGPPTECFIYHARATEMRLPC---SDHGQGRKVICIELVANRFLRKMVRVL 391

Query: 1172 XXXXXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSI 1333
                        + +  L LM+A+CRRASAPPAPPDGLCLVDVGY + + ++ I
Sbjct: 392  VATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLVDVGYTEFDPQSCI 445


>OAY58979.1 hypothetical protein MANES_02G221700 [Manihot esculenta]
          Length = 454

 Score =  387 bits (994), Expect = e-127
 Identities = 208/415 (50%), Positives = 265/415 (63%), Gaps = 23/415 (5%)
 Frame = +2

Query: 158  HVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLLAGHLSLNDLVFHR------N 319
            HVHY+H D CK  RWTA+ES++++Y RPW+++  FYS+++ GH SL +L   +      +
Sbjct: 51   HVHYNHTDSCKFSRWTARESFQFMYARPWQEVAEFYSNMVNGHSSLLELFGTQIHFVDDD 110

Query: 320  AEVTR-TCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSYFDGWQKQPGLN 496
            A++   +C T L             + K++ G+W R TFKI+LSYDG  FDGWQKQPGLN
Sbjct: 111  AKIQEVSCETQLEDS----------LNKEKFGRWARVTFKIVLSYDGGSFDGWQKQPGLN 160

Query: 497  TVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQVCSFYTWRKDVT 676
            TVQGL+E++LG+F+  KK ++L+ K  P+E    VAGRTDKGVSAL Q+ SFYTWRKDV 
Sbjct: 161  TVQGLVERSLGRFIDEKKSQQLKDKCKPLEGCAVVAGRTDKGVSALRQIFSFYTWRKDVR 220

Query: 677  ALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEGEG---------- 826
              E+E  IN+ A   L+V SV EV R FHPNFSAKWRRYLYI PL++GE           
Sbjct: 221  PYEIEDAINSSAPGKLRVLSVSEVSRVFHPNFSAKWRRYLYIFPLNDGEDREDLGNFTTD 280

Query: 827  ---DGMCNSTKEILKMEKVSATA---ESECKQLNKPYNFDVALVNQFLQQLEGRSLSYKI 988
               D   +   E    E V  +    + E +   KP  F +  VN  LQQLEG+ LSYKI
Sbjct: 281  EKYDNQRDGWGEFTYKENVDKSIMGDKYEPEGAKKPVTFSICKVNNLLQQLEGKLLSYKI 340

Query: 989  FARDTQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVMCVELVANRFLRKMXXX 1168
            FARDT+ASR+ GP TEC +Y ARA  A LPC  + +G   + VMCVELVANRFLRKM   
Sbjct: 341  FARDTKASRNEGPPTECFVYRARATEARLPCSDRAEG---RKVMCVELVANRFLRKMVRV 397

Query: 1169 XXXXXXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSI 1333
                         + +I + LM+A+CRRASAPPAPPDGLCLVDVGY + + EN I
Sbjct: 398  LVATSIREAAAGAEEDILIRLMDASCRRASAPPAPPDGLCLVDVGYTEFDPENCI 452


>KMZ71087.1 tRNA pseudouridine synthase A [Zostera marina]
          Length = 478

 Score =  387 bits (995), Expect = e-127
 Identities = 206/435 (47%), Positives = 268/435 (61%), Gaps = 36/435 (8%)
 Frame = +2

Query: 116  TMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLLAGHLSL 295
            +M     E++    + HY+H D CK LRWTA+ESYE++  RPW +I +FYS+L+ GH SL
Sbjct: 39   SMGKEAEEEEEEKVYAHYNHTDSCKHLRWTARESYEFMEKRPWHEINDFYSNLVIGHYSL 98

Query: 296  NDLVFHRNAEV-----TRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGS 460
            + L F  + E+        CG               +  +DR G+W R TFKI+LSY G 
Sbjct: 99   SYL-FGPSKELQIKNAVNRCGD--LPESADSLKEFKKFTEDRRGRWQRLTFKIVLSYHGG 155

Query: 461  YFDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQ 640
             FDGWQKQPGLNTVQG+LE +LG FV  KK ++L+ + +P+E ++SVAGRTDKGVSAL Q
Sbjct: 156  SFDGWQKQPGLNTVQGVLENSLGGFVDEKKAQQLKERLLPVEPSVSVAGRTDKGVSALQQ 215

Query: 641  VCSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEG 820
            +CSFYTW+KD+   ++E ++N +A   ++   V +V R+FHPNFSAKWRRYLYI PL + 
Sbjct: 216  ICSFYTWKKDIDTKDIEDDVNNVAPGKIRALVVSKVSRDFHPNFSAKWRRYLYIFPLKDE 275

Query: 821  EGDGMCNS----------------------------TKEILKMEKVSATAESEC---KQL 907
            +G    N                              KE+    +V++   S     +  
Sbjct: 276  DGPVTVNEQSISCDTVLSDKDLEENRCIEDSLDEEPKKEVADFNQVNSNGASNTMNDESQ 335

Query: 908  NKPYNFDVALVNQFLQQLEGRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIG 1087
             KP  F V+ VNQ ++QLEG+SLSYKIF+RDT+ASRS+GPATEC ++HARA    LPC  
Sbjct: 336  MKPKCFSVSKVNQLMRQLEGKSLSYKIFSRDTKASRSTGPATECYLFHARAVETILPCET 395

Query: 1088 KDDGHRTKNVMCVELVANRFLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPP 1267
            K D  R + VMCVELVANRFLRKM                D    L LM+ATCRRA+APP
Sbjct: 396  KVDAGR-QRVMCVELVANRFLRKMVRVLVSTAIREAAAGADDKALLRLMDATCRRATAPP 454

Query: 1268 APPDGLCLVDVGYED 1312
            APPDGLCLV+VGYE+
Sbjct: 455  APPDGLCLVEVGYEE 469


>XP_016680541.1 PREDICTED: tRNA pseudouridine synthase A-like [Gossypium hirsutum]
          Length = 447

 Score =  386 bits (992), Expect = e-127
 Identities = 205/439 (46%), Positives = 266/439 (60%), Gaps = 20/439 (4%)
 Frame = +2

Query: 77   LSRETRTSATTKITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQ 256
            + +E R      +   ++   Q     + HY+H D C   RWTA+ESY+++Y RPW+D+ 
Sbjct: 14   IGKEKRLGRFRDLVSLSSMENQTKNKIYFHYNHTDSCNSARWTARESYQFMYERPWQDVL 73

Query: 257  NFYSHLLAGHLSLNDLVFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFK 436
            +F+S+++   L+L+ +    N+   +TC   +              K++R G+W+R TFK
Sbjct: 74   HFFSNVVNARLTLSTMFGTDNSP--QTCIDVVDDDYKTSEVCDE--KEERCGRWERVTFK 129

Query: 437  ILLSYDGSYFDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTD 616
            I+LSY G  FDGWQKQPGLNTVQ ++EK+LG+FV +KK + L+ K  P+E    VAGRTD
Sbjct: 130  IILSYSGYAFDGWQKQPGLNTVQEIVEKSLGRFVDDKKARLLKEKSKPLEGCAVVAGRTD 189

Query: 617  KGVSALHQVCSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYL 796
            KGVSA+ QVCSFYTWRKDV   ++E EIN+ A   L+V  V EV R FHPNFSAKWRRYL
Sbjct: 190  KGVSAIRQVCSFYTWRKDVKPCDIEGEINSAAPGKLRVVLVSEVSRVFHPNFSAKWRRYL 249

Query: 797  YILPLHEGEGDGMC--------------------NSTKEILKMEKVSATAESECKQLNKP 916
            YI PL++ E +  C                    N   E    E V        K+   P
Sbjct: 250  YIFPLNDQENEKQCCENEKEVESFSFARNCNEPSNKCVESSSSENVENLIIGNNKEFEAP 309

Query: 917  YNFDVALVNQFLQQLEGRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIGKDD 1096
              F V  VNQ L+ LEG+ LSYK+FARDT+ASR+ GP TEC +YHARAA A +PC   ++
Sbjct: 310  TCFSVCRVNQLLRHLEGKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSVHEE 369

Query: 1097 GHRTKNVMCVELVANRFLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPPAPP 1276
            G   + VMCVELVANRFLRKM                + +  L LMEATCRRA+APPAPP
Sbjct: 370  G---RKVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMEATCRRATAPPAPP 426

Query: 1277 DGLCLVDVGYEDINNENSI 1333
            DGLCLVDVGY D N +N +
Sbjct: 427  DGLCLVDVGYTDFNPKNCL 445


>XP_011625774.1 PREDICTED: uncharacterized protein LOC18440774 [Amborella trichopoda]
          Length = 438

 Score =  386 bits (991), Expect = e-126
 Identities = 211/415 (50%), Positives = 258/415 (62%), Gaps = 24/415 (5%)
 Frame = +2

Query: 158  HVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLLAGHLSLNDL------VFHRN 319
            +VHY H D CK  RWT++ESY+++Y+RPW+ I +FYS L+   LSL+ +      +F   
Sbjct: 32   YVHYGHDDYCKFNRWTSRESYQFMYDRPWQHIVDFYSCLVDRRLSLSSMFVVEGNMFEDV 91

Query: 320  AEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSYFDGWQKQPGLNT 499
             E T  C                  K  RGG+W RRTFKI++SY GS FDGWQKQPGL T
Sbjct: 92   IEETHAC---------KEIESAETYKDSRGGRWARRTFKIVVSYHGSSFDGWQKQPGLRT 142

Query: 500  VQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQVCSFYTWRKDVTA 679
            VQG +E  LGKFV +KK ++L  K +P+E   +VAGRTDKGVSAL QVCSFYTWR DV  
Sbjct: 143  VQGSVESVLGKFVDDKKAQQLRDKSLPVEGCATVAGRTDKGVSALQQVCSFYTWRTDVKT 202

Query: 680  LEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPL----------HEGEGD 829
             E+E  INT+A   L+   V EV R FHPNFSAKWR YLYI PL          + G G 
Sbjct: 203  QEIEHAINTVAPGQLRAVYVSEVSRAFHPNFSAKWRHYLYIFPLKVEEESLGLENIGGGF 262

Query: 830  GMCNSTKEILKMEKVSATAESECK--------QLNKPYNFDVALVNQFLQQLEGRSLSYK 985
              CN+  E  K E V    E+ C         + +KP  F V+ V++ L+QLEGR LSYK
Sbjct: 263  IQCNNHDEERK-EWVENGLENGCSIMVDEDYLERSKPMRFSVSKVDRILRQLEGRLLSYK 321

Query: 986  IFARDTQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVMCVELVANRFLRKMXX 1165
            +FARDT++SR+ GP TEC +YHARAA   LPC  + DG+    VMCVELVANRFLRKM  
Sbjct: 322  MFARDTKSSRNEGPPTECFLYHARAAETRLPCPDEVDGNGL-GVMCVELVANRFLRKMVR 380

Query: 1166 XXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENS 1330
                            ++ L LM+ATCRRA+APPAPPDGLCLVDVGYED    N+
Sbjct: 381  VLVATSIREAAAGAGDDVLLRLMDATCRRATAPPAPPDGLCLVDVGYEDFKPGNT 435


>KXG20542.1 hypothetical protein SORBI_010G219000 [Sorghum bicolor] KXG20543.1
            hypothetical protein SORBI_010G219000 [Sorghum bicolor]
          Length = 481

 Score =  387 bits (995), Expect = e-126
 Identities = 211/423 (49%), Positives = 262/423 (61%), Gaps = 4/423 (0%)
 Frame = +2

Query: 68   QPPLSRETRTSATTKITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWK 247
            +P ++   +  A   +T  T  +    R +HVHY H D C  LRWTAKESYEY+Y RPW 
Sbjct: 65   RPLMATAAKARAPPAVTASTAAAAAVEREEHVHYKHTDACHQLRWTAKESYEYMYARPWS 124

Query: 248  DIQNFYSHLL---AGHLSLNDLVFHRNAEVTR-TCGTPLXXXXXXXXXXXXRVKKDRGGK 415
             + +FY+ L+   AG   L  L      + T  T G                  KDRGG+
Sbjct: 125  RVVDFYAELVRAGAGAAGLAKLFGKDEKDYTLFTAGENYLTPSEKTTVTTS--SKDRGGR 182

Query: 416  WDRRTFKILLSYDGSYFDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAI 595
            W+R TFK+++SY G  FDGWQKQPGLNTVQGL+EK LG+FV  +K K+LEA+ +PIE   
Sbjct: 183  WERVTFKVVISYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDERKAKQLEARSLPIEGCA 242

Query: 596  SVAGRTDKGVSALHQVCSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFS 775
             VAGRTDKGV+AL QVCSFYTWRKDV + +++  IN  A + LK   V EVPREFHPNFS
Sbjct: 243  VVAGRTDKGVTALQQVCSFYTWRKDVKSGDIKDAINEAAPDKLKPLHVSEVPREFHPNFS 302

Query: 776  AKWRRYLYILPLHEGEGDGMCNSTKEILKMEKVSATAESECKQLNKPYNFDVALVNQFLQ 955
            AKWRRY+YI PL E            ++  E  S+      +   KP +FDVA V++ L+
Sbjct: 303  AKWRRYMYIFPLDE---------DANLILGEAHSSKILENSEHNIKPQSFDVAKVDKILK 353

Query: 956  QLEGRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVMCVELV 1135
             L G++LSYK+FARDTQASRS GP TEC ++H+RAAVA L     +D      VMCVELV
Sbjct: 354  TLAGKTLSYKMFARDTQASRSVGPPTECFMFHSRAAVAKLH-YANEDYKEGMMVMCVELV 412

Query: 1136 ANRFLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDI 1315
            ANRFLRKM                  +  LNLMEAT RRA+APPAPP+GLCL+DVGYED 
Sbjct: 413  ANRFLRKMVRVLVATAIREAAAGAGDDALLNLMEATDRRATAPPAPPEGLCLIDVGYEDF 472

Query: 1316 NNE 1324
              +
Sbjct: 473  TKQ 475


>XP_004965639.1 PREDICTED: tRNA pseudouridine synthase A [Setaria italica] KQL11064.1
            hypothetical protein SETIT_006519mg [Setaria italica]
          Length = 422

 Score =  384 bits (987), Expect = e-126
 Identities = 206/395 (52%), Positives = 255/395 (64%), Gaps = 3/395 (0%)
 Frame = +2

Query: 149  RAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLL---AGHLSLNDLVFHRN 319
            R +HVHY H D C  LRWTAKESYEY+Y RPW  + +FY+ L+   AG   L  L F ++
Sbjct: 34   RDEHVHYKHTDACHHLRWTAKESYEYMYARPWSRVVDFYAELVRTGAGAAGLAKL-FGKD 92

Query: 320  AEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSYFDGWQKQPGLNT 499
             +      T                 KDRGG+W+R TFKI+LSY G  FDGWQKQPGLNT
Sbjct: 93   EKDYSLDTTGENYLAPSEKQTATISSKDRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNT 152

Query: 500  VQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQVCSFYTWRKDVTA 679
            VQGL+EK LG+FV  +K K+LEA+ +PIE    VAGRTDKGV+AL QVCSFYTWRKDV +
Sbjct: 153  VQGLVEKHLGQFVDERKAKQLEARSLPIEGGAIVAGRTDKGVTALQQVCSFYTWRKDVKS 212

Query: 680  LEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEGEGDGMCNSTKEIL 859
             +++  I   A + LK   V EV REFHPNF+AKWRRY+YI PL E     +     E+L
Sbjct: 213  EDIKDAIKEAAPDKLKPLHVSEVAREFHPNFAAKWRRYMYIFPLDEDAKSIIGEGHSEVL 272

Query: 860  KMEKVSATAESECKQLNKPYNFDVALVNQFLQQLEGRSLSYKIFARDTQASRSSGPATEC 1039
            K            + + KP +FDVA V++ L++L G++LSYK+FARDTQASRS GP TEC
Sbjct: 273  K----------NSEHIIKPQSFDVAKVDEILRKLAGKTLSYKMFARDTQASRSVGPPTEC 322

Query: 1040 TIYHARAAVATLPCIGKDDGHRTKNVMCVELVANRFLRKMXXXXXXXXXXXXXXXXDPNI 1219
             ++H+RAA A L C   +D     +VMCVELVANRFLRKM                  + 
Sbjct: 323  FMFHSRAAAAKLYC-ANEDYKEGLSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDA 381

Query: 1220 FLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNE 1324
             LNLMEAT RRA+APPAPP+GLCLVDVGY+D + +
Sbjct: 382  LLNLMEATDRRATAPPAPPEGLCLVDVGYKDFSKQ 416


>XP_017615457.1 PREDICTED: tRNA pseudouridine synthase A isoform X1 [Gossypium
            arboreum]
          Length = 452

 Score =  385 bits (989), Expect = e-126
 Identities = 205/442 (46%), Positives = 271/442 (61%), Gaps = 23/442 (5%)
 Frame = +2

Query: 77   LSRETRTSATTKITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQ 256
            +S+E R      +   ++   Q     + +Y+H D C   RWTA+ESY+++Y RPW+D+ 
Sbjct: 14   ISKEKRLGRFRDLVSLSSMENQTKDKIYFYYNHTDSCNSARWTARESYKFMYERPWQDVL 73

Query: 257  NFYSHLLAGHLSLNDLVFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFK 436
            +F+S+++   L+L+ +    N+    T    +              K++R G+W+R TFK
Sbjct: 74   HFFSNVVNARLTLSTVFGTDNSPQVSTYIDVVDDDYKTLELCDE--KEERFGRWERVTFK 131

Query: 437  ILLSYDGSYFDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTD 616
            I+LSY G  FDGWQKQPGLNTVQ ++EK+LG+FV +KK + L+ K  P+E    VAGRTD
Sbjct: 132  IILSYSGYAFDGWQKQPGLNTVQEIVEKSLGRFVDDKKARLLKEKSKPLEGCAVVAGRTD 191

Query: 617  KGVSALHQVCSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYL 796
            KGVSA+ QVCSFYTWRKDV   ++E EIN+ A   L+V SV EV R FHPNFSAKWRRYL
Sbjct: 192  KGVSAIRQVCSFYTWRKDVKPCDIEGEINSAAPGKLRVVSVSEVSRVFHPNFSAKWRRYL 251

Query: 797  YILPLHEGEGDGM-CNSTKEI----------------------LKMEKVSATAESECKQL 907
            YI PL++ E +   C + KE+                        +E +      E +  
Sbjct: 252  YIFPLNDQENEKQCCENVKEVESFSFARNCNEPSNKCVESSSSENVENLIIGNNKEFEAP 311

Query: 908  NKPYNFDVALVNQFLQQLEGRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIG 1087
            NKP  F V  VNQ L+ LEG+ LSY +FARDT+ASR+ GP TEC +YHARAA A +PC  
Sbjct: 312  NKPTCFSVCRVNQLLRHLEGKLLSYNMFARDTKASRNIGPPTECFMYHARAAEARIPCSV 371

Query: 1088 KDDGHRTKNVMCVELVANRFLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPP 1267
             ++G   + VMCVELVANRFLRKM                + ++ L LMEATCRRA+APP
Sbjct: 372  HEEG---RKVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDVLLKLMEATCRRATAPP 428

Query: 1268 APPDGLCLVDVGYEDINNENSI 1333
            APPDGLCLVDVGY D N +N +
Sbjct: 429  APPDGLCLVDVGYTDFNPKNCL 450


>XP_016738486.1 PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Gossypium
            hirsutum]
          Length = 452

 Score =  385 bits (989), Expect = e-126
 Identities = 205/442 (46%), Positives = 271/442 (61%), Gaps = 23/442 (5%)
 Frame = +2

Query: 77   LSRETRTSATTKITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQ 256
            +S+E R      +   ++   Q     + +Y+H D C   RWTA+ESY+++Y RPW+D+ 
Sbjct: 14   ISKEKRLGRFRDLVSLSSMENQTKDKIYFYYNHTDSCNSARWTARESYKFMYERPWQDVL 73

Query: 257  NFYSHLLAGHLSLNDLVFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFK 436
            +F+S+++   L+L+ +    N+    T    +              K++R G+W+R TFK
Sbjct: 74   HFFSNVVNARLTLSTVFGTDNSPQVSTYIDVVDDDYKTLELCDE--KEERFGRWERVTFK 131

Query: 437  ILLSYDGSYFDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTD 616
            I+LSY G  FDGWQKQPGLNTVQ ++EK+LG+FV +KK + L+ K  P+E    VAGRTD
Sbjct: 132  IILSYSGYAFDGWQKQPGLNTVQEIVEKSLGRFVDDKKARLLKEKSKPLEGCAVVAGRTD 191

Query: 617  KGVSALHQVCSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYL 796
            KGVSA+ QVCSFYTWRKDV   ++E EIN+ A   L+V SV EV R FHPNFSAKWRRYL
Sbjct: 192  KGVSAIRQVCSFYTWRKDVKPCDIEGEINSAAPGKLRVVSVSEVSRVFHPNFSAKWRRYL 251

Query: 797  YILPLHEGEGDGM-CNSTKEI----------------------LKMEKVSATAESECKQL 907
            YI PL++ E +   C + KE+                        +E +      E +  
Sbjct: 252  YIFPLNDQENEKQCCENVKEVESFSFARNCNEPSNKCVESSSSENVENLIIGNNKEFEAP 311

Query: 908  NKPYNFDVALVNQFLQQLEGRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIG 1087
            NKP  F V  VNQ L+ LEG+ LSY +FARDT+ASR+ GP TEC +YHARAA A +PC  
Sbjct: 312  NKPTCFSVCRVNQLLRHLEGKLLSYNMFARDTKASRNIGPPTECFMYHARAAEARIPCSV 371

Query: 1088 KDDGHRTKNVMCVELVANRFLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPP 1267
             ++G   + VMCVELVANRFLRKM                + ++ L LMEATCRRA+APP
Sbjct: 372  PEEG---RKVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDVLLKLMEATCRRATAPP 428

Query: 1268 APPDGLCLVDVGYEDINNENSI 1333
            APPDGLCLVDVGY D N +N +
Sbjct: 429  APPDGLCLVDVGYTDFNPKNCL 450


>XP_006656336.2 PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A [Oryza
            brachyantha]
          Length = 423

 Score =  384 bits (986), Expect = e-126
 Identities = 205/394 (52%), Positives = 255/394 (64%), Gaps = 5/394 (1%)
 Frame = +2

Query: 158  HVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLL---AGHLSLNDLVFHRNAEV 328
            HV Y+H D C  LRWTAKESYEY+Y RPW  + +FY+ L+   AG   L DL      + 
Sbjct: 37   HVQYNHTDACHHLRWTAKESYEYMYARPWSRVVDFYAELVCTGAGAAGLADLFGKDEIDY 96

Query: 329  TRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSYFDGWQKQPGLNTVQG 508
            T                   +  KDRGG+W+R TFKI+LSY G  FDGWQKQPGLNTVQG
Sbjct: 97   TLDANRD-DCTPPSEKQASMKPSKDRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQG 155

Query: 509  LLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQVCSFYTWRKDVTALEV 688
            L+EK LG+FV  KK K+LEA+ +PIE    VAGRTDKGV+AL QVCSFYTWRKDV + ++
Sbjct: 156  LVEKHLGQFVDEKKAKQLEARSLPIEGCAIVAGRTDKGVTALQQVCSFYTWRKDVKSRDI 215

Query: 689  EAEINTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEGEGDGMCNSTKEILKME 868
            +  IN    + L++  V EV REFHPNF+AKWRRYLYI PL E          K I   E
Sbjct: 216  KDAINKATPDKLRLLHVSEVSREFHPNFAAKWRRYLYIFPLDE--------DAKPISGEE 267

Query: 869  KVSATAESECKQLNKPYNFDVALVNQFLQQLEGRSLSYKIFARDTQASRSSGPATECTIY 1048
            + S   E     + KP +F+V  V++ ++QLEG+SLSYK+FARDTQASRS GP TEC ++
Sbjct: 268  QPSKILEGSEYNI-KPQSFNVVKVDKIIRQLEGKSLSYKMFARDTQASRSVGPPTECFMF 326

Query: 1049 HARAAVATLPCIGK--DDGHRTKNVMCVELVANRFLRKMXXXXXXXXXXXXXXXXDPNIF 1222
            H+RA+V  L    +  ++G R    +C+ELVANRFLRKM                + +  
Sbjct: 327  HSRASVVKLHSADENCEEGMR---AICIELVANRFLRKMVRVLVATAIREAAAGAEEDAL 383

Query: 1223 LNLMEATCRRASAPPAPPDGLCLVDVGYEDINNE 1324
            LNLMEATCRRA+APPAPP+GLCLVDVGY+D N +
Sbjct: 384  LNLMEATCRRATAPPAPPEGLCLVDVGYDDFNRQ 417


>XP_015881730.1 PREDICTED: tRNA pseudouridine synthase A [Ziziphus jujuba]
          Length = 452

 Score =  384 bits (987), Expect = e-126
 Identities = 206/414 (49%), Positives = 255/414 (61%), Gaps = 22/414 (5%)
 Frame = +2

Query: 158  HVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQNFYSHLLAGHLSLNDLVFHRNAEVTRT 337
            + HY+H D C+  RWTA+ESY+++Y RPW  + +FYS+L+  +LSL+ L       V   
Sbjct: 42   YFHYNHTDPCRFSRWTARESYQFMYARPWNQVLDFYSNLINANLSLSALFGPETYHVHNA 101

Query: 338  CGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFKILLSYDGSYFDGWQKQPGLNTVQGLLE 517
               P                ++R G+W R TFKI+LSY G  FDGWQKQPGLNTVQGL+E
Sbjct: 102  AEIPNISETAELKSVSP---ENRSGRWARLTFKIVLSYHGGSFDGWQKQPGLNTVQGLVE 158

Query: 518  KTLGKFVGNKKVKELEAKGIPIEAAISVAGRTDKGVSALHQVCSFYTWRKDVTALEVEAE 697
            K+LGKFV  KK + L+ K +P+E    VAGRTDKGV+AL QVCSFYTWRKD+ + ++E  
Sbjct: 159  KSLGKFVDEKKAQVLKDKCLPLEGCAVVAGRTDKGVTALQQVCSFYTWRKDIKSEDIEVA 218

Query: 698  INTLASECLKVASVYEVPREFHPNFSAKWRRYLYILPLHEGE------------------ 823
            IN+ A   L+V SV EV R FHPNFSAKWRRYLYI P ++GE                  
Sbjct: 219  INSAAPGTLRVKSVSEVSRVFHPNFSAKWRRYLYIFPFNDGEDGQQSSPSGEDIEQFRSN 278

Query: 824  --GDGMCNSTKE--ILKMEKVSATAESECKQLNKPYNFDVALVNQFLQQLEGRSLSYKIF 991
              GD + N   E     ++ +      E    NKP  F V  VNQ LQQLEG+ LSYK+F
Sbjct: 279  ESGDELNNGCGESHYESVQNLIINDNEEIDSGNKPKTFSVRRVNQLLQQLEGKLLSYKMF 338

Query: 992  ARDTQASRSSGPATECTIYHARAAVATLPCIGKDDGHRTKNVMCVELVANRFLRKMXXXX 1171
            ARDT+ASR+ GP TEC +YHARA  A LPC    +G R   VMCVELVANRFLRKM    
Sbjct: 339  ARDTKASRNVGPPTECFMYHARATEARLPCPDSIEGRR---VMCVELVANRFLRKMVRVL 395

Query: 1172 XXXXXXXXXXXXDPNIFLNLMEATCRRASAPPAPPDGLCLVDVGYEDINNENSI 1333
                        + +  L LM+ATCRRA+APPAP DGLCLVDVGY + N +N +
Sbjct: 396  VATSIREAAAGAEEDALLKLMDATCRRATAPPAPADGLCLVDVGYAEFNPQNRL 449


>XP_016738487.1 PREDICTED: tRNA pseudouridine synthase A-like isoform X2 [Gossypium
            hirsutum]
          Length = 450

 Score =  384 bits (986), Expect = e-126
 Identities = 205/442 (46%), Positives = 270/442 (61%), Gaps = 23/442 (5%)
 Frame = +2

Query: 77   LSRETRTSATTKITMPTTPSEQDYRAKHVHYDHQDLCKDLRWTAKESYEYLYNRPWKDIQ 256
            +S+E R      +   ++   Q     + +Y+H D C   RWTA+ESY+++Y RPW+D+ 
Sbjct: 14   ISKEKRLGRFRDLVSLSSMENQTKDKIYFYYNHTDSCNSARWTARESYKFMYERPWQDVL 73

Query: 257  NFYSHLLAGHLSLNDLVFHRNAEVTRTCGTPLXXXXXXXXXXXXRVKKDRGGKWDRRTFK 436
            +F+S+++   L+L+ +    N+  T                     K++R G+W+R TFK
Sbjct: 74   HFFSNVVNARLTLSTVFGTDNSPQTYID----VVDDDYKTLELCDEKEERFGRWERVTFK 129

Query: 437  ILLSYDGSYFDGWQKQPGLNTVQGLLEKTLGKFVGNKKVKELEAKGIPIEAAISVAGRTD 616
            I+LSY G  FDGWQKQPGLNTVQ ++EK+LG+FV +KK + L+ K  P+E    VAGRTD
Sbjct: 130  IILSYSGYAFDGWQKQPGLNTVQEIVEKSLGRFVDDKKARLLKEKSKPLEGCAVVAGRTD 189

Query: 617  KGVSALHQVCSFYTWRKDVTALEVEAEINTLASECLKVASVYEVPREFHPNFSAKWRRYL 796
            KGVSA+ QVCSFYTWRKDV   ++E EIN+ A   L+V SV EV R FHPNFSAKWRRYL
Sbjct: 190  KGVSAIRQVCSFYTWRKDVKPCDIEGEINSAAPGKLRVVSVSEVSRVFHPNFSAKWRRYL 249

Query: 797  YILPLHEGEGDGM-CNSTKEI----------------------LKMEKVSATAESECKQL 907
            YI PL++ E +   C + KE+                        +E +      E +  
Sbjct: 250  YIFPLNDQENEKQCCENVKEVESFSFARNCNEPSNKCVESSSSENVENLIIGNNKEFEAP 309

Query: 908  NKPYNFDVALVNQFLQQLEGRSLSYKIFARDTQASRSSGPATECTIYHARAAVATLPCIG 1087
            NKP  F V  VNQ L+ LEG+ LSY +FARDT+ASR+ GP TEC +YHARAA A +PC  
Sbjct: 310  NKPTCFSVCRVNQLLRHLEGKLLSYNMFARDTKASRNIGPPTECFMYHARAAEARIPCSV 369

Query: 1088 KDDGHRTKNVMCVELVANRFLRKMXXXXXXXXXXXXXXXXDPNIFLNLMEATCRRASAPP 1267
             ++G   + VMCVELVANRFLRKM                + ++ L LMEATCRRA+APP
Sbjct: 370  PEEG---RKVMCVELVANRFLRKMVRVLVATSIREAAAGAEEDVLLKLMEATCRRATAPP 426

Query: 1268 APPDGLCLVDVGYEDINNENSI 1333
            APPDGLCLVDVGY D N +N +
Sbjct: 427  APPDGLCLVDVGYTDFNPKNCL 448