BLASTX nr result

ID: Ephedra29_contig00009361 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00009361
         (490 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR18212.1 unknown [Picea sitchensis]                                  53   8e-09

>ABR18212.1 unknown [Picea sitchensis]
          Length = 323

 Score = 53.1 bits (126), Expect(2) = 8e-09
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = +1

Query: 202 MSQPRVTITLGRNGGVVQRAACLADERDSDKERLSGKKRP 321
           MS+PRVTITLGR+G VVQR A + DER SD+  L+ +KRP
Sbjct: 1   MSRPRVTITLGRSGQVVQRPASIPDERHSDQIPLTSRKRP 40



 Score = 33.9 bits (76), Expect(2) = 8e-09
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
 Frame = +3

Query: 330 DSASHHGDQIDAKRQRNQS-------DQNRSYNHRGNGDTKVDAHDLRYKLLRRRSSQ 482
           D+ S +  Q + KRQR          D N+  N     + KVD  DLR KLLR++ S+
Sbjct: 50  DNTSSYDHQNNLKRQRRDQRSWKYPHDNNKDGNALQFSNGKVDVQDLRMKLLRKKPSR 107


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