BLASTX nr result

ID: Ephedra29_contig00009184 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00009184
         (4476 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006859038.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1681   0.0  
XP_010242918.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1677   0.0  
XP_018684753.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1673   0.0  
JAT39990.1 DNA-directed RNA polymerase II subunit RPB2 [Anthuriu...  1672   0.0  
XP_002274051.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1671   0.0  
XP_020094305.1 DNA-directed RNA polymerase II subunit RPB2 [Anan...  1668   0.0  
XP_010920288.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ...  1663   0.0  
XP_015690688.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1658   0.0  
XP_006650345.2 PREDICTED: DNA-directed RNA polymerase II subunit...  1658   0.0  
XP_008801262.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1658   0.0  
EEE59590.1 hypothetical protein OsJ_11898 [Oryza sativa Japonica...  1658   0.0  
XP_015631661.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1658   0.0  
OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta]  1657   0.0  
XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1656   0.0  
KMZ63282.1 DNA-directed RNA polymerase [Zostera marina]              1656   0.0  
XP_003561873.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1656   0.0  
XP_016179997.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1655   0.0  
XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1654   0.0  
XP_010529417.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1654   0.0  
XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit...  1654   0.0  

>XP_006859038.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Amborella
            trichopoda] ERN20505.1 hypothetical protein
            AMTR_s00068p00181410 [Amborella trichopoda]
          Length = 1190

 Score = 1681 bits (4353), Expect = 0.0
 Identities = 831/929 (89%), Positives = 881/929 (94%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ +
Sbjct: 16   ITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAD 75

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 76   FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 135

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EELAE+QEL K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 136  HEELAEQQELTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 195

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QN+PPSSMFVRMLSR S KGGSSGQ+
Sbjct: 196  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNKPPSSMFVRMLSRTSSKGGSSGQY 255

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 256  IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRG+TVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 316  VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLVC 375

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRRPEDDRDHYGNKRLDLAGPLLG LFR +FRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 376  ALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRSYVQKCVDNGKEVNLQFAI 435

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA
Sbjct: 436  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 495

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 496  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 555

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP ATK+FVNGCWVGIHRNP+ LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD
Sbjct: 556  SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 615

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R S DEGWHDLVA+GFIEYVD       MISM
Sbjct: 616  YGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDEGWHDLVAKGFIEYVDTEEEETTMISM 675

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TI+DLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 676  TISDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 735

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 736  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 795

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 796  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 855

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKTTP+TQEE  G   RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 856  APPGTRVSGEDVIIGKTTPITQEEMQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 915

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 916  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 944



 Score =  431 bits (1109), Expect = e-125
 Identities = 206/210 (98%), Positives = 209/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 963  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1022

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1023 GFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1082

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1083 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNK 1142

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDI+QVHIPYACKLLFQELMAMAIAPRMFT
Sbjct: 1143 TDIIQVHIPYACKLLFQELMAMAIAPRMFT 1172


>XP_010242918.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo
            nucifera]
          Length = 1189

 Score = 1677 bits (4344), Expect = 0.0
 Identities = 832/930 (89%), Positives = 881/930 (94%), Gaps = 4/930 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 18   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 77

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 78   FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 137

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+ E QE  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 138  CEEVTETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 197

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPSSMFVRMLSR S KGGSSGQ+
Sbjct: 198  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 257

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 258  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 317

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRG+TVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 318  VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 377

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+Y+QKCVD+GKDVNLQ+AI
Sbjct: 378  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 437

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 438  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 497

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 498  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 557

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP ATK+FVNGCWVGIHRNP+ LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD
Sbjct: 558  SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 617

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R SS+E GWHDLVA+GFIEYVD       MIS
Sbjct: 618  YGRCSRPLFIVEKQRLLIKKKDIRALQQRESSEEGGWHDLVAKGFIEYVDTEEEETTMIS 677

Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
            MTINDLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 678  MTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 737

Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
            MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 738  MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 797

Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
            SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRPSRENT GMRHGSYDKLD+DG
Sbjct: 798  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPSRENTMGMRHGSYDKLDDDG 857

Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
            LAPPGTRVSGEDVIIGKTTP+ Q++S G   RYTRRD STS+RHSESGMVDQVLLTTN D
Sbjct: 858  LAPPGTRVSGEDVIIGKTTPIAQDDSQGQSSRYTRRDHSTSLRHSESGMVDQVLLTTNAD 917

Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            GLRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 918  GLRFVKVRMRSVRIPQIGDKFSSRHGQKGT 947



 Score =  429 bits (1102), Expect = e-124
 Identities = 205/210 (97%), Positives = 208/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 966  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1025

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1026 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1085

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1086 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1145

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELM+MAIAPRM T
Sbjct: 1146 TDIVQVHIPYACKLLFQELMSMAIAPRMLT 1175


>XP_018684753.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Musa
            acuminata subsp. malaccensis]
          Length = 1184

 Score = 1673 bits (4333), Expect = 0.0
 Identities = 821/929 (88%), Positives = 881/929 (94%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 16   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 75

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKR+ KKG +
Sbjct: 76   FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 135

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+AE Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 136  CEEVAETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 195

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR S KGGSSGQ+
Sbjct: 196  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 255

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+DIPIII+FRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 256  IRATLPYIRADIPIIIIFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 316  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 375

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 376  AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 435

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 436  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 495

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEWSTE+FEEI
Sbjct: 496  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 555

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP +TK+FVNGCWVGIHRNPD LV TLRQLRRQ+DVN EVGV+RDI LKELRLYTD
Sbjct: 556  SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 615

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R + +EGWHDLV++GFIEY+D       MISM
Sbjct: 616  YGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEEGWHDLVSKGFIEYIDTEEEETTMISM 675

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDLV AR++PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 676  TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 735

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 736  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 795

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSY+KLD+DGL
Sbjct: 796  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYEKLDDDGL 855

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKT+P+ Q+++ G   RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 856  APPGTRVSGEDVIIGKTSPIPQDDAQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 915

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 916  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 944



 Score =  429 bits (1102), Expect = e-125
 Identities = 205/210 (97%), Positives = 208/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 963  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1022

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1023 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1082

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1083 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1142

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1143 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1172


>JAT39990.1 DNA-directed RNA polymerase II subunit RPB2 [Anthurium amnicola]
            JAT42934.1 DNA-directed RNA polymerase II subunit RPB2
            [Anthurium amnicola] JAT51792.1 DNA-directed RNA
            polymerase II subunit RPB2 [Anthurium amnicola]
            JAT61623.1 DNA-directed RNA polymerase II subunit RPB2
            [Anthurium amnicola]
          Length = 1173

 Score = 1672 bits (4331), Expect = 0.0
 Identities = 823/929 (88%), Positives = 877/929 (94%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 15   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 74

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKR+ KKG +
Sbjct: 75   FLETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 134

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+AE QE  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 135  CEEVAETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 194

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNKFAYV EVRSMAE+QNRP SSMFVRMLSR S KGGSSGQ+
Sbjct: 195  IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASSMFVRMLSRTSAKGGSSGQY 254

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+D+PIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 255  IRATLPYIRADVPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 314

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 315  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 374

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SY+QKCVD+GKDVNLQ+AI
Sbjct: 375  ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVNLQFAI 434

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 435  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 494

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 495  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 554

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP ATK+FVNGCWVGIHRNPD LV TLRQLRRQVDVN EVG++RDI LKELRLYTD
Sbjct: 555  SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGIIRDIRLKELRLYTD 614

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+ Q LLI+K  I  LQ+R S +EGWHDLV +GFIEY+D       MISM
Sbjct: 615  YGRCSRPLFIVEKQTLLIKKRHIRALQQRESQEEGWHDLVTKGFIEYIDTEEEETTMISM 674

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDL+ AR++PEEAY  TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 675  TINDLINARQNPEEAYAETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 734

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 735  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 794

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+R+NT GMRHGSYDKLD+DGL
Sbjct: 795  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRDNTMGMRHGSYDKLDDDGL 854

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKT+P+ Q+ES G   RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 855  APPGTRVSGEDVIIGKTSPIPQDESQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 914

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 915  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 943



 Score =  429 bits (1102), Expect = e-125
 Identities = 205/210 (97%), Positives = 208/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 962  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1021

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1022 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1081

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN+F+CRGCKNK
Sbjct: 1082 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNTFECRGCKNK 1141

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1142 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1171


>XP_002274051.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
            vinifera] CAN72948.1 hypothetical protein VITISV_033708
            [Vitis vinifera] CBI21848.3 unnamed protein product,
            partial [Vitis vinifera]
          Length = 1193

 Score = 1671 bits (4328), Expect = 0.0
 Identities = 827/930 (88%), Positives = 880/930 (94%), Gaps = 4/930 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 22   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 81

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKR+ KKG +
Sbjct: 82   FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 141

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+ E QE  K+F+GKVPIMLRS+YCT+    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 142  LEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPSSMFVRMLSR S KGGSSGQ+
Sbjct: 202  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 262  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRG+TVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 322  VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+Y+QKCVD+GKDVNLQ+AI
Sbjct: 382  ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 441

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 442  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 502  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 561

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP +TK+FVNGCWVGIHRNPD LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD
Sbjct: 562  SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 621

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDXXXXXXXMIS 2227
            YGRCSRPLF+V+ QRLLI+K DI  LQ R S  D GWHDLV++GFIEYVD       MIS
Sbjct: 622  YGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMIS 681

Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
            MTINDL+ AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 682  MTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741

Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
            MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 742  MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801

Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
            SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DG
Sbjct: 802  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 861

Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
            LAPPGTRVSGEDVIIGKTTP++Q++S G   RYTRRD STS+RHSESGMVDQVLLTTN D
Sbjct: 862  LAPPGTRVSGEDVIIGKTTPISQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 921

Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            GLRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 922  GLRFVKVRMRSVRIPQIGDKFSSRHGQKGT 951



 Score =  431 bits (1108), Expect = e-125
 Identities = 207/210 (98%), Positives = 208/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 970  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1029

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1030 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1089

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1090 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1149

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1150 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179


>XP_020094305.1 DNA-directed RNA polymerase II subunit RPB2 [Ananas comosus]
            OAY64594.1 DNA-directed RNA polymerase II subunit RPB2
            [Ananas comosus]
          Length = 1187

 Score = 1668 bits (4320), Expect = 0.0
 Identities = 823/929 (88%), Positives = 877/929 (94%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ+E
Sbjct: 19   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSE 78

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ +K++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVT RV KKG +
Sbjct: 79   FSETLHKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTYRVVKKGHD 138

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+ E QE  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 139  CEEVTETQEYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVL 198

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR S KGGSSGQ+
Sbjct: 199  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 258

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 259  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 318

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 319  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 378

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 379  AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 438

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKT++SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 439  KAKTVTSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 498

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 499  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 558

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 559  SPAVIPQAAKIFVNGCWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 618

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+NQRLLI+K DI  LQ+R S +EGWHDLVA+GFIEY+D       MISM
Sbjct: 619  YGRCSRPLFIVENQRLLIKKKDIRALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMISM 678

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDLV AR++P+EAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 679  TINDLVNARQNPDEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 738

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 739  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 798

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 799  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 858

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKT+P++Q++S G   RYTRRD ST +RHSESGMVDQVLLTTN DG
Sbjct: 859  APPGTRVSGEDVIIGKTSPISQDDSQGQASRYTRRDHSTCLRHSESGMVDQVLLTTNADG 918

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 919  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 947



 Score =  425 bits (1093), Expect = e-123
 Identities = 204/210 (97%), Positives = 207/210 (98%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 966  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1025

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1026 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1085

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1086 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1145

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1146 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1175


>XP_010920288.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB2 [Elaeis guineensis]
          Length = 1187

 Score = 1663 bits (4306), Expect = 0.0
 Identities = 820/929 (88%), Positives = 878/929 (94%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPGRQ++
Sbjct: 17   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGRQSD 76

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTK+V KKG +
Sbjct: 77   FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKVIKKGHD 136

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+ E QE  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 137  CEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSM E+Q+RP S+MFVRMLSR S KGGSSGQ+
Sbjct: 197  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVRMLSRTSAKGGSSGQY 256

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 257  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 317  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 376

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 377  ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 437  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEW TE+FEEI
Sbjct: 497  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP A+K+FVNG WVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 557  SPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 616

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+NQRLLI+K DI  LQ+R S +EGWHDLVA+GFIEY+D       MI+M
Sbjct: 617  YGRCSRPLFIVENQRLLIKKKDIQALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMIAM 676

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDLV AR++PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677  TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 737  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 797  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 856

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKT+P+ Q++S G   RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 857  APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVDQVLLTTNADG 916

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 917  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 945



 Score =  432 bits (1111), Expect = e-126
 Identities = 207/210 (98%), Positives = 209/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 964  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1023

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1024 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1083

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1084 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1143

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRMFT
Sbjct: 1144 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 1173


>XP_015690688.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
            [Oryza brachyantha] XP_015690689.1 PREDICTED:
            DNA-directed RNA polymerase II subunit RPB2 isoform X3
            [Oryza brachyantha]
          Length = 1219

 Score = 1658 bits (4294), Expect = 0.0
 Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 51   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 110

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 111  FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 170

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+ E  E  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 171  CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 230

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 231  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 290

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 291  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 350

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 351  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 410

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 411  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 470

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 471  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 530

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 531  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 590

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 591  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 650

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+NQRLLI+K  I  LQ+R + +EGWHDLVA+GFIEY+D       MISM
Sbjct: 651  YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 710

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 711  TINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 770

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 771  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 830

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 831  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 890

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKT+P+ Q+++ G   RYT+RD STS+RHSESGMVDQVLLTTN DG
Sbjct: 891  APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 950

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 951  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 979



 Score =  425 bits (1093), Expect = e-123
 Identities = 204/210 (97%), Positives = 207/210 (98%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 998  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1057

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1058 GFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1117

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1118 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1177

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1178 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1207


>XP_006650345.2 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
            [Oryza brachyantha]
          Length = 1254

 Score = 1658 bits (4294), Expect = 0.0
 Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 86   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 145

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 146  FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 205

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+ E  E  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 206  CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 265

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 266  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 325

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 326  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 385

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 386  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 445

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 446  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 505

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 506  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 565

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 566  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 625

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 626  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 685

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+NQRLLI+K  I  LQ+R + +EGWHDLVA+GFIEY+D       MISM
Sbjct: 686  YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 745

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 746  TINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 805

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 806  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 865

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 866  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 925

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKT+P+ Q+++ G   RYT+RD STS+RHSESGMVDQVLLTTN DG
Sbjct: 926  APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 985

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 986  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 1014



 Score =  425 bits (1093), Expect = e-123
 Identities = 204/210 (97%), Positives = 207/210 (98%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 1033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1092

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1093 GFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1152

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1153 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1212

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1213 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1242


>XP_008801262.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Phoenix
            dactylifera]
          Length = 1187

 Score = 1658 bits (4293), Expect = 0.0
 Identities = 818/929 (88%), Positives = 876/929 (94%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPGRQ++
Sbjct: 17   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGRQSD 76

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTK+V KKG +
Sbjct: 77   FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKVIKKGHD 136

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+ E QE  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 137  CEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSM E+Q+RP S+MFVRMLSR S KGGSSGQ+
Sbjct: 197  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVRMLSRTSAKGGSSGQY 256

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 257  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 317  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 376

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 377  ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQAN AG RAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 437  KAKTITSGLKYSLATGNWGQANQAGARAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEW TE+FEEI
Sbjct: 497  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP A+K+FVNG WVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 557  SPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 616

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+NQRLLI+K  I  LQ+R S +EGWHDLVA+GFIEY+D       MI+M
Sbjct: 617  YGRCSRPLFIVENQRLLIKKRHIQALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMIAM 676

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDLV AR++PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677  TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 737  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 797  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 856

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKT+P+ Q++S G   RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 857  APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVDQVLLTTNADG 916

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 917  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 945



 Score =  430 bits (1105), Expect = e-125
 Identities = 205/210 (97%), Positives = 209/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 964  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1023

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGR+L AMIF+GPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1024 GFETMYNGHTGRKLTAMIFIGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1083

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1084 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1143

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRMF+
Sbjct: 1144 TDIVQVHIPYACKLLFQELMAMAIAPRMFS 1173


>EEE59590.1 hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
          Length = 1218

 Score = 1658 bits (4293), Expect = 0.0
 Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 50   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 109

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 110  FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 169

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+ E  E  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 170  CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 229

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 230  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 289

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 290  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 349

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 350  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 409

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 410  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 469

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 470  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 529

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 530  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 589

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 590  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 649

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+NQRLLI+K  I  LQ+R + +EGWHDLVA+GFIEY+D       MISM
Sbjct: 650  YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 709

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDL+ AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 710  TINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 769

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 770  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 829

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 830  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 889

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKT+P+ Q+++ G   RYT+RD STS+RHSESGMVDQVLLTTN DG
Sbjct: 890  APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 949

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 950  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 978



 Score =  425 bits (1093), Expect = e-123
 Identities = 204/210 (97%), Positives = 207/210 (98%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 997  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1056

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1057 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1116

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1117 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1176

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1177 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1206


>XP_015631661.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Oryza sativa
            Japonica Group] ABF97884.1 DNA-directed RNA polymerase II
            135 kDa polypeptide, putative, expressed [Oryza sativa
            Japonica Group] EAY91202.1 hypothetical protein OsI_12811
            [Oryza sativa Indica Group]
          Length = 1222

 Score = 1658 bits (4293), Expect = 0.0
 Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 54   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 113

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 114  FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 173

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+ E  E  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 174  CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 233

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 234  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 293

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 294  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 353

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 354  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 413

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 414  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 473

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 474  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 533

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 534  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 593

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 594  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 653

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+NQRLLI+K  I  LQ+R + +EGWHDLVA+GFIEY+D       MISM
Sbjct: 654  YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 713

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDL+ AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 714  TINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 773

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 774  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 833

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 834  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 893

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKT+P+ Q+++ G   RYT+RD STS+RHSESGMVDQVLLTTN DG
Sbjct: 894  APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 953

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 954  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 982



 Score =  425 bits (1093), Expect = e-123
 Identities = 204/210 (97%), Positives = 207/210 (98%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 1001 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1060

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1061 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1120

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1121 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1180

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1181 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1210


>OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta]
          Length = 1192

 Score = 1657 bits (4290), Expect = 0.0
 Identities = 821/930 (88%), Positives = 873/930 (93%), Gaps = 4/930 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 21   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ YK+ FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 81   FAETIYKICFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 141  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 201  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 260

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 261  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 321  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 380

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 381  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 440

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 441  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 501  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP ATK+FVNGCWVGIHRNPD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 561  SPAVIPQATKIFVNGCWVGIHRNPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R SS+E GWHDLVA+GFIEY+D       MIS
Sbjct: 621  YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 680

Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
            MTI+DLVQAR +PEEAY  TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681  MTIHDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740

Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
            MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800

Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
            SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 801  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 860

Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
            LAPPGTRVSGEDVIIGKTTP++QE++ G   RYTRRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 861  LAPPGTRVSGEDVIIGKTTPISQEDAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 920

Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 921  GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 950



 Score =  430 bits (1105), Expect = e-125
 Identities = 206/210 (98%), Positives = 208/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMR
Sbjct: 969  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMR 1028

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1029 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1088

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1089 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1148

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1149 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1178


>XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ricinus
            communis] EEF43271.1 DNA-directed RNA polymerase II
            subunit, putative [Ricinus communis]
          Length = 1194

 Score = 1656 bits (4289), Expect = 0.0
 Identities = 821/930 (88%), Positives = 874/930 (93%), Gaps = 4/930 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 263  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 563  SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R SS+E GWHDLVA+GFIEY+D       MIS
Sbjct: 623  YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 682

Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
            MTI+DLVQAR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683  MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742

Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
            MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802

Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
            SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 803  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862

Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
            LAPPGTRVSGEDVIIGKTTP+ QEE+ G   RYTRRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 863  LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 922

Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 923  GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 952



 Score =  431 bits (1108), Expect = e-125
 Identities = 207/210 (98%), Positives = 208/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 971  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1030

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1031 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1090

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1091 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1150

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1151 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180


>KMZ63282.1 DNA-directed RNA polymerase [Zostera marina]
          Length = 1186

 Score = 1656 bits (4288), Expect = 0.0
 Identities = 813/929 (87%), Positives = 876/929 (94%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA +EIRPESQHNPGRQ++
Sbjct: 18   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAHMEIRPESQHNPGRQSD 77

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
             +E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDV++R+ KKG +
Sbjct: 78   CVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSRRIIKKGHD 137

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+AE Q+  K+F+GKVPIMLRS+YCTL  + EKDL ELGECPYDQGGYF+INGSEKVL
Sbjct: 138  CEEVAESQDFAKVFIGKVPIMLRSSYCTLYQSSEKDLTELGECPYDQGGYFVINGSEKVL 197

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYVGEVRSMAE+QNRP SSMFVRML+R S KGGSSGQ+
Sbjct: 198  IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPASSMFVRMLARTSAKGGSSGQY 257

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 258  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 317

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRG+TVGVT++KRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 318  VALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 377

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SY+QKCVD+GKDVNLQ+AI
Sbjct: 378  ALGRRQEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVNLQFAI 437

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA
Sbjct: 438  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 497

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 498  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 557

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP ATK+FVNGCWVGIHRNPD LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD
Sbjct: 558  SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 617

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R + +EGWHDLV +GFIEY+D       MISM
Sbjct: 618  YGRCSRPLFIVERQRLLIKKRDIRALQQRETQEEGWHDLVTKGFIEYIDTEEEETTMISM 677

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDL+ AR++P +AY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 678  TINDLINARQNPNDAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 737

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 738  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 797

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+L+KEDFG P+RENT GMRHGSYDKLD DGL
Sbjct: 798  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGCPNRENTMGMRHGSYDKLDIDGL 857

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKTTP+ Q+E+ G   RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 858  APPGTRVSGEDVIIGKTTPIVQDETQGQATRYTRRDHSTSLRHSESGMVDQVLLTTNADG 917

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 918  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 946



 Score =  417 bits (1073), Expect = e-120
 Identities = 199/210 (94%), Positives = 206/210 (98%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 965  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1024

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFE MYNGHTGR+L A+IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1025 GFEAMYNGHTGRKLTALIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1084

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKK+S++CRGCKNK
Sbjct: 1085 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEQCGLIAIANLKKSSYECRGCKNK 1144

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELM+MAIAPRM T
Sbjct: 1145 TDIVQVHIPYACKLLFQELMSMAIAPRMMT 1174


>XP_003561873.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Brachypodium
            distachyon] KQK13978.1 hypothetical protein BRADI_1g13720
            [Brachypodium distachyon]
          Length = 1228

 Score = 1656 bits (4288), Expect = 0.0
 Identities = 818/929 (88%), Positives = 871/929 (93%), Gaps = 3/929 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 60   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 119

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 120  FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVVKKGHD 179

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
             EE+ E  E  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYF+INGSEKVL
Sbjct: 180  CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVL 239

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNKFAYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 240  IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 299

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 300  IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 359

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 360  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 419

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 420  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 479

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 480  KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 539

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 540  KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 599

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 600  SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 659

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
            YGRCSRPLF+V  QRLLI+K  I  LQ+R + DEGWHDLVA+GFIEY+D       MISM
Sbjct: 660  YGRCSRPLFIVDGQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDTEEEETTMISM 719

Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
            TINDLV AR +P+EAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 720  TINDLVSARNNPQEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 779

Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
            GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 780  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 839

Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 840  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 899

Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
            APPGTRVSGEDVIIGKT+P+ Q+++ G   RY++RD STS+RHSESGMVDQVLLTTN DG
Sbjct: 900  APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYSKRDHSTSLRHSESGMVDQVLLTTNADG 959

Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 960  LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 988



 Score =  425 bits (1093), Expect = e-123
 Identities = 204/210 (97%), Positives = 207/210 (98%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 1007 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1066

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1067 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1126

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1127 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1186

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1187 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1216


>XP_016179997.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Arachis
            ipaensis]
          Length = 1194

 Score = 1655 bits (4287), Expect = 0.0
 Identities = 820/930 (88%), Positives = 872/930 (93%), Gaps = 4/930 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 23   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 83   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 143  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 203  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRASSKGGSSGQY 262

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIRS+IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 263  IRATLPYIRSEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 323  VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR Y+QKCVD+GKDVNLQ+AI
Sbjct: 383  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEW TE+FEEI
Sbjct: 503  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAASPILEFLEEWGTENFEEI 562

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 563  SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
            YGRCSRPLF+V  QRLLI+K DI  LQ+R S +E GWHDLV++GFIEY+D       MIS
Sbjct: 623  YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 682

Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
            MTINDLVQAR +PEEAY  TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683  MTINDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742

Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
            MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802

Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
            SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 803  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 862

Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
            LAPPGTRVSGEDVIIGKTTP++QEE+ G   RYTRRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 863  LAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYTRRDHSISLRHSETGIVDQVLLTTNAD 922

Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 923  GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 952



 Score =  427 bits (1099), Expect = e-124
 Identities = 205/210 (97%), Positives = 208/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 971  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1030

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1031 GFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1090

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1091 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1150

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQV+IPYACKLLFQELMAMAIAPRM T
Sbjct: 1151 TDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180


>XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha
            curcas]
          Length = 1193

 Score = 1654 bits (4284), Expect = 0.0
 Identities = 820/930 (88%), Positives = 873/930 (93%), Gaps = 4/930 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q +
Sbjct: 22   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 81

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 82   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 141

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 142  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPSSMFVRMLSR S KGGSSGQ+
Sbjct: 202  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 262  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 322  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLT+DVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 382  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKDVRSYVQKCVDNGKDVNLQFAI 441

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 442  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 502  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 561

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 562  SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 621

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R SS+E GWHDLVA+GFIEY+D       MIS
Sbjct: 622  YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 681

Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
            MTI+DLVQAR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 682  MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741

Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
            MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 742  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801

Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
            SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 802  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 861

Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
            LAPPGTRVSGEDVIIGKTTP+ QEE+ G   RYTRRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 862  LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 921

Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 922  GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 951



 Score =  431 bits (1108), Expect = e-125
 Identities = 207/210 (98%), Positives = 208/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 970  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1029

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1030 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1089

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1090 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1149

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1150 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179


>XP_010529417.1 PREDICTED: DNA-directed RNA polymerase II subunit 2-like [Tarenaya
            hassleriana]
          Length = 1192

 Score = 1654 bits (4283), Expect = 0.0
 Identities = 815/930 (87%), Positives = 872/930 (93%), Gaps = 4/930 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 20   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 80   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 140  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 200  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSTMFVRMLSRASSKGGSSGQY 259

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IR TLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MME LRPSLEEAFVIQ+QQ
Sbjct: 260  IRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEFLRPSLEEAFVIQNQQ 319

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT++KRIKYAKDILQKEMLPHVG G+ CETKKAYYFGYIIHRLLLC
Sbjct: 320  VALDYIGKRGATVGVTRDKRIKYAKDILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 379

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 380  AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKT++SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 440  KAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 500  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 560  SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
            YGRCSRPLF+V+NQ LLI+K DI  LQ+R SS+E GWHDLVA+GFIEY+D       MIS
Sbjct: 620  YGRCSRPLFIVENQALLIKKKDIYALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 679

Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
            MTINDLVQAR  PE+AY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680  MTINDLVQARLRPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739

Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
            MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799

Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
            SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 800  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859

Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
            LAPPGTRVSGEDVIIGKTTP++QEE+ G   RYTRRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 860  LAPPGTRVSGEDVIIGKTTPLSQEEAQGQASRYTRRDHSISLRHSETGIVDQVLLTTNAD 919

Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 920  GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 949



 Score =  416 bits (1070), Expect = e-120
 Identities = 199/210 (94%), Positives = 204/210 (97%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTV+NIS+ALHKCGYQ R
Sbjct: 968  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVENISRALHKCGYQQR 1027

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFE MYNGHTGR L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1028 GFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1087

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+ANLKKNSF+CRGCKNK
Sbjct: 1088 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCECCGLIALANLKKNSFECRGCKNK 1147

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQVHIPYACKLLFQELM+MAIAPRM T
Sbjct: 1148 TDIVQVHIPYACKLLFQELMSMAIAPRMLT 1177


>XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Theobroma
            cacao] EOY28253.1 DNA-directed RNA polymerase family
            protein isoform 1 [Theobroma cacao]
          Length = 1189

 Score = 1654 bits (4283), Expect = 0.0
 Identities = 818/930 (87%), Positives = 873/930 (93%), Gaps = 4/930 (0%)
 Frame = +2

Query: 254  ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
            ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 20   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79

Query: 434  FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
            F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 80   FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139

Query: 614  GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
            GEE+ E Q+  K+F+GKVPIMLRS+YCTL    EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 140  GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199

Query: 794  IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
            IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 200  IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259

Query: 971  IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
            IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD  MMELLRPSLEEAFVIQ+QQ
Sbjct: 260  IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319

Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
            VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVG+ CETKKAYYFGYIIHRLLLC
Sbjct: 320  VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379

Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
            ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 380  ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439

Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
            KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 440  KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499

Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
            KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 500  KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559

Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
            SPAVIP ATK+FVNGCWVG+HRNPD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 560  SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619

Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDXXXXXXXMIS 2227
            YGRCSRPLF+V+ QRLLI+K DI  LQ+R S  D GWHDLVA+GFIEY+D       MIS
Sbjct: 620  YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679

Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
            MTINDLVQAR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680  MTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739

Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
            MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740  MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799

Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
            SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 800  SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859

Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
            LAPPGTRVSGEDVIIGKTTP++QEE+ G   RY+RRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 860  LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHSETGIVDQVLLTTNAD 919

Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
            GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 920  GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 949



 Score =  427 bits (1099), Expect = e-124
 Identities = 205/210 (97%), Positives = 208/210 (99%)
 Frame = +3

Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
            PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMR
Sbjct: 968  PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMR 1027

Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
            GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1028 GFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1087

Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
            LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1088 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1147

Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
            TDIVQV+IPYACKLLFQELMAMAIAPRM T
Sbjct: 1148 TDIVQVYIPYACKLLFQELMAMAIAPRMLT 1177


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