BLASTX nr result
ID: Ephedra29_contig00009184
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00009184 (4476 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_006859038.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1681 0.0 XP_010242918.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1677 0.0 XP_018684753.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1673 0.0 JAT39990.1 DNA-directed RNA polymerase II subunit RPB2 [Anthuriu... 1672 0.0 XP_002274051.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1671 0.0 XP_020094305.1 DNA-directed RNA polymerase II subunit RPB2 [Anan... 1668 0.0 XP_010920288.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 1663 0.0 XP_015690688.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1658 0.0 XP_006650345.2 PREDICTED: DNA-directed RNA polymerase II subunit... 1658 0.0 XP_008801262.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1658 0.0 EEE59590.1 hypothetical protein OsJ_11898 [Oryza sativa Japonica... 1658 0.0 XP_015631661.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1658 0.0 OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta] 1657 0.0 XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1656 0.0 KMZ63282.1 DNA-directed RNA polymerase [Zostera marina] 1656 0.0 XP_003561873.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1656 0.0 XP_016179997.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1655 0.0 XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1654 0.0 XP_010529417.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1654 0.0 XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1654 0.0 >XP_006859038.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Amborella trichopoda] ERN20505.1 hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda] Length = 1190 Score = 1681 bits (4353), Expect = 0.0 Identities = 831/929 (89%), Positives = 881/929 (94%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ + Sbjct: 16 ITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAD 75 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG + Sbjct: 76 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 135 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EELAE+QEL K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 136 HEELAEQQELTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 195 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QN+PPSSMFVRMLSR S KGGSSGQ+ Sbjct: 196 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNKPPSSMFVRMLSRTSSKGGSSGQY 255 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 256 IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRG+TVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C Sbjct: 316 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLVC 375 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRRPEDDRDHYGNKRLDLAGPLLG LFR +FRKLTRDVRSY+QKCVD+GK+VNLQ+AI Sbjct: 376 ALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRSYVQKCVDNGKEVNLQFAI 435 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA Sbjct: 436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 495 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI Sbjct: 496 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 555 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP ATK+FVNGCWVGIHRNP+ LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD Sbjct: 556 SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 615 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+ QRLLI+K DI LQ+R S DEGWHDLVA+GFIEYVD MISM Sbjct: 616 YGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDEGWHDLVAKGFIEYVDTEEEETTMISM 675 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TI+DLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 676 TISDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 735 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS Sbjct: 736 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 795 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL Sbjct: 796 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 855 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKTTP+TQEE G RYTRRD STS+RHSESGMVDQVLLTTN DG Sbjct: 856 APPGTRVSGEDVIIGKTTPITQEEMQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 915 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 916 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 944 Score = 431 bits (1109), Expect = e-125 Identities = 206/210 (98%), Positives = 209/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 963 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1022 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1023 GFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1082 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK Sbjct: 1083 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNK 1142 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDI+QVHIPYACKLLFQELMAMAIAPRMFT Sbjct: 1143 TDIIQVHIPYACKLLFQELMAMAIAPRMFT 1172 >XP_010242918.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo nucifera] Length = 1189 Score = 1677 bits (4344), Expect = 0.0 Identities = 832/930 (89%), Positives = 881/930 (94%), Gaps = 4/930 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++ Sbjct: 18 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 77 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG + Sbjct: 78 FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 137 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+ E QE K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 138 CEEVTETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 197 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPSSMFVRMLSR S KGGSSGQ+ Sbjct: 198 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 257 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 258 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 317 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRG+TVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 318 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 377 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+Y+QKCVD+GKDVNLQ+AI Sbjct: 378 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 437 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 438 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 497 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI Sbjct: 498 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 557 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP ATK+FVNGCWVGIHRNP+ LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD Sbjct: 558 SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 617 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227 YGRCSRPLF+V+ QRLLI+K DI LQ+R SS+E GWHDLVA+GFIEYVD MIS Sbjct: 618 YGRCSRPLFIVEKQRLLIKKKDIRALQQRESSEEGGWHDLVAKGFIEYVDTEEEETTMIS 677 Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407 MTINDLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA Sbjct: 678 MTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 737 Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED Sbjct: 738 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 797 Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRPSRENT GMRHGSYDKLD+DG Sbjct: 798 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPSRENTMGMRHGSYDKLDDDG 857 Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941 LAPPGTRVSGEDVIIGKTTP+ Q++S G RYTRRD STS+RHSESGMVDQVLLTTN D Sbjct: 858 LAPPGTRVSGEDVIIGKTTPIAQDDSQGQSSRYTRRDHSTSLRHSESGMVDQVLLTTNAD 917 Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 GLRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 918 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGT 947 Score = 429 bits (1102), Expect = e-124 Identities = 205/210 (97%), Positives = 208/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 966 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1025 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1026 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1085 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK Sbjct: 1086 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1145 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELM+MAIAPRM T Sbjct: 1146 TDIVQVHIPYACKLLFQELMSMAIAPRMLT 1175 >XP_018684753.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Musa acuminata subsp. malaccensis] Length = 1184 Score = 1673 bits (4333), Expect = 0.0 Identities = 821/929 (88%), Positives = 881/929 (94%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++ Sbjct: 16 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 75 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKR+ KKG + Sbjct: 76 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 135 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+AE Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 136 CEEVAETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 195 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR S KGGSSGQ+ Sbjct: 196 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 255 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+DIPIII+FRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 256 IRATLPYIRADIPIIIIFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 316 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 375 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI Sbjct: 376 AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 435 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 436 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 495 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEWSTE+FEEI Sbjct: 496 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 555 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP +TK+FVNGCWVGIHRNPD LV TLRQLRRQ+DVN EVGV+RDI LKELRLYTD Sbjct: 556 SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 615 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+ QRLLI+K DI LQ+R + +EGWHDLV++GFIEY+D MISM Sbjct: 616 YGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEEGWHDLVSKGFIEYIDTEEEETTMISM 675 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDLV AR++PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 676 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 735 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS Sbjct: 736 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 795 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSY+KLD+DGL Sbjct: 796 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYEKLDDDGL 855 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKT+P+ Q+++ G RYTRRD STS+RHSESGMVDQVLLTTN DG Sbjct: 856 APPGTRVSGEDVIIGKTSPIPQDDAQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 915 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 916 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 944 Score = 429 bits (1102), Expect = e-125 Identities = 205/210 (97%), Positives = 208/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 963 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1022 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1023 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1082 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK Sbjct: 1083 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1142 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1143 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1172 >JAT39990.1 DNA-directed RNA polymerase II subunit RPB2 [Anthurium amnicola] JAT42934.1 DNA-directed RNA polymerase II subunit RPB2 [Anthurium amnicola] JAT51792.1 DNA-directed RNA polymerase II subunit RPB2 [Anthurium amnicola] JAT61623.1 DNA-directed RNA polymerase II subunit RPB2 [Anthurium amnicola] Length = 1173 Score = 1672 bits (4331), Expect = 0.0 Identities = 823/929 (88%), Positives = 877/929 (94%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++ Sbjct: 15 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 74 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKR+ KKG + Sbjct: 75 FLETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 134 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+AE QE K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 135 CEEVAETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 194 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNKFAYV EVRSMAE+QNRP SSMFVRMLSR S KGGSSGQ+ Sbjct: 195 IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASSMFVRMLSRTSAKGGSSGQY 254 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+D+PIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 255 IRATLPYIRADVPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 314 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 315 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 374 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SY+QKCVD+GKDVNLQ+AI Sbjct: 375 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVNLQFAI 434 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 435 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 494 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI Sbjct: 495 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 554 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP ATK+FVNGCWVGIHRNPD LV TLRQLRRQVDVN EVG++RDI LKELRLYTD Sbjct: 555 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGIIRDIRLKELRLYTD 614 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+ Q LLI+K I LQ+R S +EGWHDLV +GFIEY+D MISM Sbjct: 615 YGRCSRPLFIVEKQTLLIKKRHIRALQQRESQEEGWHDLVTKGFIEYIDTEEEETTMISM 674 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDL+ AR++PEEAY TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 675 TINDLINARQNPEEAYAETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 734 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS Sbjct: 735 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 794 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+R+NT GMRHGSYDKLD+DGL Sbjct: 795 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRDNTMGMRHGSYDKLDDDGL 854 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKT+P+ Q+ES G RYTRRD STS+RHSESGMVDQVLLTTN DG Sbjct: 855 APPGTRVSGEDVIIGKTSPIPQDESQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 914 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 915 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 943 Score = 429 bits (1102), Expect = e-125 Identities = 205/210 (97%), Positives = 208/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 962 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1021 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1022 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1081 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN+F+CRGCKNK Sbjct: 1082 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNTFECRGCKNK 1141 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1142 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1171 >XP_002274051.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis vinifera] CAN72948.1 hypothetical protein VITISV_033708 [Vitis vinifera] CBI21848.3 unnamed protein product, partial [Vitis vinifera] Length = 1193 Score = 1671 bits (4328), Expect = 0.0 Identities = 827/930 (88%), Positives = 880/930 (94%), Gaps = 4/930 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++ Sbjct: 22 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 81 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKR+ KKG + Sbjct: 82 FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 141 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+ E QE K+F+GKVPIMLRS+YCT+ EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 142 LEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPSSMFVRMLSR S KGGSSGQ+ Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRG+TVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 322 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+Y+QKCVD+GKDVNLQ+AI Sbjct: 382 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 441 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI Sbjct: 502 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 561 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP +TK+FVNGCWVGIHRNPD LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD Sbjct: 562 SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 621 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDXXXXXXXMIS 2227 YGRCSRPLF+V+ QRLLI+K DI LQ R S D GWHDLV++GFIEYVD MIS Sbjct: 622 YGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMIS 681 Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407 MTINDL+ AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA Sbjct: 682 MTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741 Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED Sbjct: 742 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801 Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DG Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 861 Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941 LAPPGTRVSGEDVIIGKTTP++Q++S G RYTRRD STS+RHSESGMVDQVLLTTN D Sbjct: 862 LAPPGTRVSGEDVIIGKTTPISQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 921 Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 GLRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 922 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGT 951 Score = 431 bits (1108), Expect = e-125 Identities = 207/210 (98%), Positives = 208/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 970 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1029 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1030 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1089 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK Sbjct: 1090 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1149 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1150 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179 >XP_020094305.1 DNA-directed RNA polymerase II subunit RPB2 [Ananas comosus] OAY64594.1 DNA-directed RNA polymerase II subunit RPB2 [Ananas comosus] Length = 1187 Score = 1668 bits (4320), Expect = 0.0 Identities = 823/929 (88%), Positives = 877/929 (94%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ+E Sbjct: 19 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSE 78 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ +K++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVT RV KKG + Sbjct: 79 FSETLHKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTYRVVKKGHD 138 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+ E QE K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 139 CEEVTETQEYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVL 198 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR S KGGSSGQ+ Sbjct: 199 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 258 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 259 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 318 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 319 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 378 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI Sbjct: 379 AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 438 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKT++SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 439 KAKTVTSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 498 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI Sbjct: 499 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 558 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD Sbjct: 559 SPAVIPQAAKIFVNGCWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 618 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+NQRLLI+K DI LQ+R S +EGWHDLVA+GFIEY+D MISM Sbjct: 619 YGRCSRPLFIVENQRLLIKKKDIRALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMISM 678 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDLV AR++P+EAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 679 TINDLVNARQNPDEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 738 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS Sbjct: 739 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 798 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL Sbjct: 799 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 858 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKT+P++Q++S G RYTRRD ST +RHSESGMVDQVLLTTN DG Sbjct: 859 APPGTRVSGEDVIIGKTSPISQDDSQGQASRYTRRDHSTCLRHSESGMVDQVLLTTNADG 918 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 919 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 947 Score = 425 bits (1093), Expect = e-123 Identities = 204/210 (97%), Positives = 207/210 (98%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 966 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1025 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1026 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1085 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK Sbjct: 1086 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1145 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1146 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1175 >XP_010920288.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2 [Elaeis guineensis] Length = 1187 Score = 1663 bits (4306), Expect = 0.0 Identities = 820/929 (88%), Positives = 878/929 (94%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPGRQ++ Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGRQSD 76 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTK+V KKG + Sbjct: 77 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKVIKKGHD 136 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+ E QE K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 137 CEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSM E+Q+RP S+MFVRMLSR S KGGSSGQ+ Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVRMLSRTSAKGGSSGQY 256 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 376 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 437 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEW TE+FEEI Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP A+K+FVNG WVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD Sbjct: 557 SPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 616 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+NQRLLI+K DI LQ+R S +EGWHDLVA+GFIEY+D MI+M Sbjct: 617 YGRCSRPLFIVENQRLLIKKKDIQALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMIAM 676 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDLV AR++PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 677 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 856 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKT+P+ Q++S G RYTRRD STS+RHSESGMVDQVLLTTN DG Sbjct: 857 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVDQVLLTTNADG 916 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 945 Score = 432 bits (1111), Expect = e-126 Identities = 207/210 (98%), Positives = 209/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 964 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1023 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1024 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1083 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK Sbjct: 1084 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1143 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRMFT Sbjct: 1144 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 1173 >XP_015690688.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2 [Oryza brachyantha] XP_015690689.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X3 [Oryza brachyantha] Length = 1219 Score = 1658 bits (4294), Expect = 0.0 Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E Sbjct: 51 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 110 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG + Sbjct: 111 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 170 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+ E E K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 171 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 230 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+ Sbjct: 231 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 290 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 291 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 350 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C Sbjct: 351 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 410 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI Sbjct: 411 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 470 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 471 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 530 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI Sbjct: 531 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 590 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD Sbjct: 591 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 650 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+NQRLLI+K I LQ+R + +EGWHDLVA+GFIEY+D MISM Sbjct: 651 YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 710 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 711 TINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 770 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS Sbjct: 771 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 830 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL Sbjct: 831 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 890 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKT+P+ Q+++ G RYT+RD STS+RHSESGMVDQVLLTTN DG Sbjct: 891 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 950 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 951 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 979 Score = 425 bits (1093), Expect = e-123 Identities = 204/210 (97%), Positives = 207/210 (98%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 998 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1057 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1058 GFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1117 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK Sbjct: 1118 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1177 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1178 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1207 >XP_006650345.2 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1 [Oryza brachyantha] Length = 1254 Score = 1658 bits (4294), Expect = 0.0 Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E Sbjct: 86 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 145 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG + Sbjct: 146 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 205 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+ E E K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 206 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 265 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+ Sbjct: 266 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 325 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 326 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 385 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C Sbjct: 386 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 445 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI Sbjct: 446 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 505 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 506 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 565 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI Sbjct: 566 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 625 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD Sbjct: 626 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 685 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+NQRLLI+K I LQ+R + +EGWHDLVA+GFIEY+D MISM Sbjct: 686 YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 745 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 746 TINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 805 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS Sbjct: 806 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 865 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL Sbjct: 866 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 925 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKT+P+ Q+++ G RYT+RD STS+RHSESGMVDQVLLTTN DG Sbjct: 926 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 985 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 986 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 1014 Score = 425 bits (1093), Expect = e-123 Identities = 204/210 (97%), Positives = 207/210 (98%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 1033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1092 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1093 GFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1152 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK Sbjct: 1153 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1212 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1213 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1242 >XP_008801262.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Phoenix dactylifera] Length = 1187 Score = 1658 bits (4293), Expect = 0.0 Identities = 818/929 (88%), Positives = 876/929 (94%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPGRQ++ Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGRQSD 76 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTK+V KKG + Sbjct: 77 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKVIKKGHD 136 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+ E QE K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 137 CEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSM E+Q+RP S+MFVRMLSR S KGGSSGQ+ Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVRMLSRTSAKGGSSGQY 256 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 376 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQAN AG RAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 437 KAKTITSGLKYSLATGNWGQANQAGARAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEW TE+FEEI Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP A+K+FVNG WVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD Sbjct: 557 SPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 616 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+NQRLLI+K I LQ+R S +EGWHDLVA+GFIEY+D MI+M Sbjct: 617 YGRCSRPLFIVENQRLLIKKRHIQALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMIAM 676 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDLV AR++PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 677 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 856 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKT+P+ Q++S G RYTRRD STS+RHSESGMVDQVLLTTN DG Sbjct: 857 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVDQVLLTTNADG 916 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 945 Score = 430 bits (1105), Expect = e-125 Identities = 205/210 (97%), Positives = 209/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 964 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1023 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGR+L AMIF+GPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1024 GFETMYNGHTGRKLTAMIFIGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1083 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK Sbjct: 1084 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1143 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRMF+ Sbjct: 1144 TDIVQVHIPYACKLLFQELMAMAIAPRMFS 1173 >EEE59590.1 hypothetical protein OsJ_11898 [Oryza sativa Japonica Group] Length = 1218 Score = 1658 bits (4293), Expect = 0.0 Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E Sbjct: 50 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 109 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG + Sbjct: 110 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 169 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+ E E K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 170 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 229 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+ Sbjct: 230 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 289 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 290 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 349 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C Sbjct: 350 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 409 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI Sbjct: 410 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 469 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 470 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 529 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI Sbjct: 530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 589 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD Sbjct: 590 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 649 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+NQRLLI+K I LQ+R + +EGWHDLVA+GFIEY+D MISM Sbjct: 650 YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 709 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDL+ AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 710 TINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 769 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS Sbjct: 770 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 829 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL Sbjct: 830 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 889 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKT+P+ Q+++ G RYT+RD STS+RHSESGMVDQVLLTTN DG Sbjct: 890 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 949 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 950 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 978 Score = 425 bits (1093), Expect = e-123 Identities = 204/210 (97%), Positives = 207/210 (98%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 997 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1056 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1057 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1116 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK Sbjct: 1117 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1176 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1177 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1206 >XP_015631661.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Oryza sativa Japonica Group] ABF97884.1 DNA-directed RNA polymerase II 135 kDa polypeptide, putative, expressed [Oryza sativa Japonica Group] EAY91202.1 hypothetical protein OsI_12811 [Oryza sativa Indica Group] Length = 1222 Score = 1658 bits (4293), Expect = 0.0 Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E Sbjct: 54 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 113 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG + Sbjct: 114 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 173 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+ E E K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 174 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 233 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+ Sbjct: 234 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 293 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 294 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 353 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C Sbjct: 354 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 413 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI Sbjct: 414 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 473 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 474 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 533 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI Sbjct: 534 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 593 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD Sbjct: 594 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 653 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+NQRLLI+K I LQ+R + +EGWHDLVA+GFIEY+D MISM Sbjct: 654 YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 713 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDL+ AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 714 TINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 773 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS Sbjct: 774 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 833 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL Sbjct: 834 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 893 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKT+P+ Q+++ G RYT+RD STS+RHSESGMVDQVLLTTN DG Sbjct: 894 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 953 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 954 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 982 Score = 425 bits (1093), Expect = e-123 Identities = 204/210 (97%), Positives = 207/210 (98%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 1001 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1060 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1061 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1120 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK Sbjct: 1121 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1180 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1181 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1210 >OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta] Length = 1192 Score = 1657 bits (4290), Expect = 0.0 Identities = 821/930 (88%), Positives = 873/930 (93%), Gaps = 4/930 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++ Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ YK+ FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG + Sbjct: 81 FAETIYKICFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+ Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 260 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 261 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 321 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 380 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 440 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP ATK+FVNGCWVGIHRNPD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRNPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227 YGRCSRPLF+V+ QRLLI+K DI LQ+R SS+E GWHDLVA+GFIEY+D MIS Sbjct: 621 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 680 Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407 MTI+DLVQAR +PEEAY TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA Sbjct: 681 MTIHDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740 Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587 MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800 Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG Sbjct: 801 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 860 Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941 LAPPGTRVSGEDVIIGKTTP++QE++ G RYTRRD S S+RHSE+G+VDQVLLTTN D Sbjct: 861 LAPPGTRVSGEDVIIGKTTPISQEDAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 920 Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT Sbjct: 921 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 950 Score = 430 bits (1105), Expect = e-125 Identities = 206/210 (98%), Positives = 208/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMR Sbjct: 969 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMR 1028 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1029 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1088 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK Sbjct: 1089 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1148 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1149 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1178 >XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ricinus communis] EEF43271.1 DNA-directed RNA polymerase II subunit, putative [Ricinus communis] Length = 1194 Score = 1656 bits (4289), Expect = 0.0 Identities = 821/930 (88%), Positives = 874/930 (93%), Gaps = 4/930 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++ Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG + Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+ Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227 YGRCSRPLF+V+ QRLLI+K DI LQ+R SS+E GWHDLVA+GFIEY+D MIS Sbjct: 623 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 682 Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407 MTI+DLVQAR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA Sbjct: 683 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742 Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587 MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802 Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862 Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941 LAPPGTRVSGEDVIIGKTTP+ QEE+ G RYTRRD S S+RHSE+G+VDQVLLTTN D Sbjct: 863 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 922 Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 952 Score = 431 bits (1108), Expect = e-125 Identities = 207/210 (98%), Positives = 208/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 971 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1030 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1031 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1090 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK Sbjct: 1091 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1150 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1151 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180 >KMZ63282.1 DNA-directed RNA polymerase [Zostera marina] Length = 1186 Score = 1656 bits (4288), Expect = 0.0 Identities = 813/929 (87%), Positives = 876/929 (94%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA +EIRPESQHNPGRQ++ Sbjct: 18 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAHMEIRPESQHNPGRQSD 77 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 +E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDV++R+ KKG + Sbjct: 78 CVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSRRIIKKGHD 137 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+AE Q+ K+F+GKVPIMLRS+YCTL + EKDL ELGECPYDQGGYF+INGSEKVL Sbjct: 138 CEEVAESQDFAKVFIGKVPIMLRSSYCTLYQSSEKDLTELGECPYDQGGYFVINGSEKVL 197 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYVGEVRSMAE+QNRP SSMFVRML+R S KGGSSGQ+ Sbjct: 198 IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPASSMFVRMLARTSAKGGSSGQY 257 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 258 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 317 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRG+TVGVT++KRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 318 VALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 377 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SY+QKCVD+GKDVNLQ+AI Sbjct: 378 ALGRRQEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVNLQFAI 437 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA Sbjct: 438 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 497 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI Sbjct: 498 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 557 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP ATK+FVNGCWVGIHRNPD LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD Sbjct: 558 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 617 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V+ QRLLI+K DI LQ+R + +EGWHDLV +GFIEY+D MISM Sbjct: 618 YGRCSRPLFIVERQRLLIKKRDIRALQQRETQEEGWHDLVTKGFIEYIDTEEEETTMISM 677 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDL+ AR++P +AY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 678 TINDLINARQNPNDAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 737 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS Sbjct: 738 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 797 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+L+KEDFG P+RENT GMRHGSYDKLD DGL Sbjct: 798 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGCPNRENTMGMRHGSYDKLDIDGL 857 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKTTP+ Q+E+ G RYTRRD STS+RHSESGMVDQVLLTTN DG Sbjct: 858 APPGTRVSGEDVIIGKTTPIVQDETQGQATRYTRRDHSTSLRHSESGMVDQVLLTTNADG 917 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 918 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 946 Score = 417 bits (1073), Expect = e-120 Identities = 199/210 (94%), Positives = 206/210 (98%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 965 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1024 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFE MYNGHTGR+L A+IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1025 GFEAMYNGHTGRKLTALIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1084 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKK+S++CRGCKNK Sbjct: 1085 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEQCGLIAIANLKKSSYECRGCKNK 1144 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELM+MAIAPRM T Sbjct: 1145 TDIVQVHIPYACKLLFQELMSMAIAPRMMT 1174 >XP_003561873.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Brachypodium distachyon] KQK13978.1 hypothetical protein BRADI_1g13720 [Brachypodium distachyon] Length = 1228 Score = 1656 bits (4288), Expect = 0.0 Identities = 818/929 (88%), Positives = 871/929 (93%), Gaps = 3/929 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E Sbjct: 60 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 119 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG + Sbjct: 120 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVVKKGHD 179 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 EE+ E E K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYF+INGSEKVL Sbjct: 180 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVL 239 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNKFAYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+ Sbjct: 240 IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 299 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 300 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 359 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C Sbjct: 360 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 419 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI Sbjct: 420 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 479 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 480 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 539 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI Sbjct: 540 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 599 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD Sbjct: 600 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 659 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230 YGRCSRPLF+V QRLLI+K I LQ+R + DEGWHDLVA+GFIEY+D MISM Sbjct: 660 YGRCSRPLFIVDGQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDTEEEETTMISM 719 Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410 TINDLV AR +P+EAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM Sbjct: 720 TINDLVSARNNPQEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 779 Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS Sbjct: 780 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 839 Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770 VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL Sbjct: 840 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 899 Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944 APPGTRVSGEDVIIGKT+P+ Q+++ G RY++RD STS+RHSESGMVDQVLLTTN DG Sbjct: 900 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYSKRDHSTSLRHSESGMVDQVLLTTNADG 959 Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 LRFVK+RMRSVRIPQIGDKFSSRHGQKGT Sbjct: 960 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 988 Score = 425 bits (1093), Expect = e-123 Identities = 204/210 (97%), Positives = 207/210 (98%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 1007 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1066 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1067 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1126 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK Sbjct: 1127 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1186 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1187 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1216 >XP_016179997.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Arachis ipaensis] Length = 1194 Score = 1655 bits (4287), Expect = 0.0 Identities = 820/930 (88%), Positives = 872/930 (93%), Gaps = 4/930 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++ Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG + Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+ Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRASSKGGSSGQY 262 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIRS+IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 263 IRATLPYIRSEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR Y+QKCVD+GKDVNLQ+AI Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEW TE+FEEI Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAASPILEFLEEWGTENFEEI 562 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227 YGRCSRPLF+V QRLLI+K DI LQ+R S +E GWHDLV++GFIEY+D MIS Sbjct: 623 YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 682 Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407 MTINDLVQAR +PEEAY TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA Sbjct: 683 MTINDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742 Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587 MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802 Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 862 Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941 LAPPGTRVSGEDVIIGKTTP++QEE+ G RYTRRD S S+RHSE+G+VDQVLLTTN D Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYTRRDHSISLRHSETGIVDQVLLTTNAD 922 Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 952 Score = 427 bits (1099), Expect = e-124 Identities = 205/210 (97%), Positives = 208/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 971 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1030 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1031 GFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1090 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK Sbjct: 1091 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1150 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQV+IPYACKLLFQELMAMAIAPRM T Sbjct: 1151 TDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180 >XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha curcas] Length = 1193 Score = 1654 bits (4284), Expect = 0.0 Identities = 820/930 (88%), Positives = 873/930 (93%), Gaps = 4/930 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q + Sbjct: 22 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 81 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG + Sbjct: 82 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 141 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 142 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPSSMFVRMLSR S KGGSSGQ+ Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC Sbjct: 322 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLT+DVRSY+QKCVD+GKDVNLQ+AI Sbjct: 382 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKDVRSYVQKCVDNGKDVNLQFAI 441 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI Sbjct: 502 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 561 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD Sbjct: 562 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 621 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227 YGRCSRPLF+V+ QRLLI+K DI LQ+R SS+E GWHDLVA+GFIEY+D MIS Sbjct: 622 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 681 Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407 MTI+DLVQAR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA Sbjct: 682 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741 Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587 MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED Sbjct: 742 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801 Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 861 Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941 LAPPGTRVSGEDVIIGKTTP+ QEE+ G RYTRRD S S+RHSE+G+VDQVLLTTN D Sbjct: 862 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 921 Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT Sbjct: 922 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 951 Score = 431 bits (1108), Expect = e-125 Identities = 207/210 (98%), Positives = 208/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR Sbjct: 970 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1029 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1030 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1089 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK Sbjct: 1090 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1149 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELMAMAIAPRM T Sbjct: 1150 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179 >XP_010529417.1 PREDICTED: DNA-directed RNA polymerase II subunit 2-like [Tarenaya hassleriana] Length = 1192 Score = 1654 bits (4283), Expect = 0.0 Identities = 815/930 (87%), Positives = 872/930 (93%), Gaps = 4/930 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++ Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG + Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRPPS+MFVRMLSR S KGGSSGQ+ Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSTMFVRMLSRASSKGGSSGQY 259 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IR TLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MME LRPSLEEAFVIQ+QQ Sbjct: 260 IRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEFLRPSLEEAFVIQNQQ 319 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT++KRIKYAKDILQKEMLPHVG G+ CETKKAYYFGYIIHRLLLC Sbjct: 320 VALDYIGKRGATVGVTRDKRIKYAKDILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 379 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI Sbjct: 380 AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKT++SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 440 KAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD Sbjct: 560 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227 YGRCSRPLF+V+NQ LLI+K DI LQ+R SS+E GWHDLVA+GFIEY+D MIS Sbjct: 620 YGRCSRPLFIVENQALLIKKKDIYALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 679 Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407 MTINDLVQAR PE+AY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA Sbjct: 680 MTINDLVQARLRPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739 Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587 MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799 Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859 Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941 LAPPGTRVSGEDVIIGKTTP++QEE+ G RYTRRD S S+RHSE+G+VDQVLLTTN D Sbjct: 860 LAPPGTRVSGEDVIIGKTTPLSQEEAQGQASRYTRRDHSISLRHSETGIVDQVLLTTNAD 919 Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 949 Score = 416 bits (1070), Expect = e-120 Identities = 199/210 (94%), Positives = 204/210 (97%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTV+NIS+ALHKCGYQ R Sbjct: 968 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVENISRALHKCGYQQR 1027 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFE MYNGHTGR L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1028 GFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1087 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+ANLKKNSF+CRGCKNK Sbjct: 1088 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCECCGLIALANLKKNSFECRGCKNK 1147 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQVHIPYACKLLFQELM+MAIAPRM T Sbjct: 1148 TDIVQVHIPYACKLLFQELMSMAIAPRMLT 1177 >XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Theobroma cacao] EOY28253.1 DNA-directed RNA polymerase family protein isoform 1 [Theobroma cacao] Length = 1189 Score = 1654 bits (4283), Expect = 0.0 Identities = 818/930 (87%), Positives = 873/930 (93%), Gaps = 4/930 (0%) Frame = +2 Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++ Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79 Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613 F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG + Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139 Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793 GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199 Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970 IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+ Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259 Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150 IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319 Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330 VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVG+ CETKKAYYFGYIIHRLLLC Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379 Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510 ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439 Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690 KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499 Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870 KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559 Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050 SPAVIP ATK+FVNGCWVG+HRNPD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619 Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDXXXXXXXMIS 2227 YGRCSRPLF+V+ QRLLI+K DI LQ+R S D GWHDLVA+GFIEY+D MIS Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679 Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407 MTINDLVQAR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA Sbjct: 680 MTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739 Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587 MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799 Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859 Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941 LAPPGTRVSGEDVIIGKTTP++QEE+ G RY+RRD S S+RHSE+G+VDQVLLTTN D Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHSETGIVDQVLLTTNAD 919 Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031 GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 949 Score = 427 bits (1099), Expect = e-124 Identities = 205/210 (97%), Positives = 208/210 (99%) Frame = +3 Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMR Sbjct: 968 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMR 1027 Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392 GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG Sbjct: 1028 GFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1087 Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK Sbjct: 1088 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1147 Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662 TDIVQV+IPYACKLLFQELMAMAIAPRM T Sbjct: 1148 TDIVQVYIPYACKLLFQELMAMAIAPRMLT 1177