BLASTX nr result
ID: Ephedra29_contig00009184
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00009184
(4476 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006859038.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1681 0.0
XP_010242918.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1677 0.0
XP_018684753.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1673 0.0
JAT39990.1 DNA-directed RNA polymerase II subunit RPB2 [Anthuriu... 1672 0.0
XP_002274051.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1671 0.0
XP_020094305.1 DNA-directed RNA polymerase II subunit RPB2 [Anan... 1668 0.0
XP_010920288.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 1663 0.0
XP_015690688.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1658 0.0
XP_006650345.2 PREDICTED: DNA-directed RNA polymerase II subunit... 1658 0.0
XP_008801262.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1658 0.0
EEE59590.1 hypothetical protein OsJ_11898 [Oryza sativa Japonica... 1658 0.0
XP_015631661.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1658 0.0
OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta] 1657 0.0
XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1656 0.0
KMZ63282.1 DNA-directed RNA polymerase [Zostera marina] 1656 0.0
XP_003561873.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1656 0.0
XP_016179997.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1655 0.0
XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1654 0.0
XP_010529417.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1654 0.0
XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit... 1654 0.0
>XP_006859038.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Amborella
trichopoda] ERN20505.1 hypothetical protein
AMTR_s00068p00181410 [Amborella trichopoda]
Length = 1190
Score = 1681 bits (4353), Expect = 0.0
Identities = 831/929 (89%), Positives = 881/929 (94%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ +
Sbjct: 16 ITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAD 75
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 76 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 135
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EELAE+QEL K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 136 HEELAEQQELTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 195
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QN+PPSSMFVRMLSR S KGGSSGQ+
Sbjct: 196 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNKPPSSMFVRMLSRTSSKGGSSGQY 255
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 256 IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRG+TVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 316 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLVC 375
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRRPEDDRDHYGNKRLDLAGPLLG LFR +FRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 376 ALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRSYVQKCVDNGKEVNLQFAI 435
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA
Sbjct: 436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 495
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 496 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 555
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP ATK+FVNGCWVGIHRNP+ LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD
Sbjct: 556 SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 615
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+ QRLLI+K DI LQ+R S DEGWHDLVA+GFIEYVD MISM
Sbjct: 616 YGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDEGWHDLVAKGFIEYVDTEEEETTMISM 675
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TI+DLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 676 TISDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 735
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 736 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 795
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 796 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 855
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKTTP+TQEE G RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 856 APPGTRVSGEDVIIGKTTPITQEEMQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 915
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 916 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 944
Score = 431 bits (1109), Expect = e-125
Identities = 206/210 (98%), Positives = 209/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 963 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1022
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1023 GFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1082
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1083 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNK 1142
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDI+QVHIPYACKLLFQELMAMAIAPRMFT
Sbjct: 1143 TDIIQVHIPYACKLLFQELMAMAIAPRMFT 1172
>XP_010242918.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo
nucifera]
Length = 1189
Score = 1677 bits (4344), Expect = 0.0
Identities = 832/930 (89%), Positives = 881/930 (94%), Gaps = 4/930 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 18 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 77
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 78 FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 137
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+ E QE K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 138 CEEVTETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 197
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPSSMFVRMLSR S KGGSSGQ+
Sbjct: 198 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 257
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 258 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 317
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRG+TVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 318 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 377
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+Y+QKCVD+GKDVNLQ+AI
Sbjct: 378 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 437
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 438 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 497
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 498 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 557
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP ATK+FVNGCWVGIHRNP+ LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD
Sbjct: 558 SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 617
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
YGRCSRPLF+V+ QRLLI+K DI LQ+R SS+E GWHDLVA+GFIEYVD MIS
Sbjct: 618 YGRCSRPLFIVEKQRLLIKKKDIRALQQRESSEEGGWHDLVAKGFIEYVDTEEEETTMIS 677
Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
MTINDLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 678 MTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 737
Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 738 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 797
Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRPSRENT GMRHGSYDKLD+DG
Sbjct: 798 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPSRENTMGMRHGSYDKLDDDG 857
Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
LAPPGTRVSGEDVIIGKTTP+ Q++S G RYTRRD STS+RHSESGMVDQVLLTTN D
Sbjct: 858 LAPPGTRVSGEDVIIGKTTPIAQDDSQGQSSRYTRRDHSTSLRHSESGMVDQVLLTTNAD 917
Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
GLRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 918 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGT 947
Score = 429 bits (1102), Expect = e-124
Identities = 205/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 966 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1025
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1026 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1085
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1086 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1145
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELM+MAIAPRM T
Sbjct: 1146 TDIVQVHIPYACKLLFQELMSMAIAPRMLT 1175
>XP_018684753.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Musa
acuminata subsp. malaccensis]
Length = 1184
Score = 1673 bits (4333), Expect = 0.0
Identities = 821/929 (88%), Positives = 881/929 (94%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 16 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 75
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKR+ KKG +
Sbjct: 76 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 135
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+AE Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 136 CEEVAETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 195
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR S KGGSSGQ+
Sbjct: 196 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 255
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+DIPIII+FRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 256 IRATLPYIRADIPIIIIFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 316 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 375
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 376 AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 435
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 436 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 495
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEWSTE+FEEI
Sbjct: 496 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 555
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP +TK+FVNGCWVGIHRNPD LV TLRQLRRQ+DVN EVGV+RDI LKELRLYTD
Sbjct: 556 SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 615
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+ QRLLI+K DI LQ+R + +EGWHDLV++GFIEY+D MISM
Sbjct: 616 YGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEEGWHDLVSKGFIEYIDTEEEETTMISM 675
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDLV AR++PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 676 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 735
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 736 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 795
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSY+KLD+DGL
Sbjct: 796 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYEKLDDDGL 855
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKT+P+ Q+++ G RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 856 APPGTRVSGEDVIIGKTSPIPQDDAQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 915
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 916 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 944
Score = 429 bits (1102), Expect = e-125
Identities = 205/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 963 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1022
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1023 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1082
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1083 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1142
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1143 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1172
>JAT39990.1 DNA-directed RNA polymerase II subunit RPB2 [Anthurium amnicola]
JAT42934.1 DNA-directed RNA polymerase II subunit RPB2
[Anthurium amnicola] JAT51792.1 DNA-directed RNA
polymerase II subunit RPB2 [Anthurium amnicola]
JAT61623.1 DNA-directed RNA polymerase II subunit RPB2
[Anthurium amnicola]
Length = 1173
Score = 1672 bits (4331), Expect = 0.0
Identities = 823/929 (88%), Positives = 877/929 (94%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 15 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 74
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKR+ KKG +
Sbjct: 75 FLETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 134
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+AE QE K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 135 CEEVAETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 194
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNKFAYV EVRSMAE+QNRP SSMFVRMLSR S KGGSSGQ+
Sbjct: 195 IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASSMFVRMLSRTSAKGGSSGQY 254
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+D+PIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 255 IRATLPYIRADVPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 314
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 315 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 374
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SY+QKCVD+GKDVNLQ+AI
Sbjct: 375 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVNLQFAI 434
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 435 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 494
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 495 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 554
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP ATK+FVNGCWVGIHRNPD LV TLRQLRRQVDVN EVG++RDI LKELRLYTD
Sbjct: 555 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGIIRDIRLKELRLYTD 614
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+ Q LLI+K I LQ+R S +EGWHDLV +GFIEY+D MISM
Sbjct: 615 YGRCSRPLFIVEKQTLLIKKRHIRALQQRESQEEGWHDLVTKGFIEYIDTEEEETTMISM 674
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDL+ AR++PEEAY TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 675 TINDLINARQNPEEAYAETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 734
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 735 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 794
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+R+NT GMRHGSYDKLD+DGL
Sbjct: 795 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRDNTMGMRHGSYDKLDDDGL 854
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKT+P+ Q+ES G RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 855 APPGTRVSGEDVIIGKTSPIPQDESQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 914
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 915 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 943
Score = 429 bits (1102), Expect = e-125
Identities = 205/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 962 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1021
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1022 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1081
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN+F+CRGCKNK
Sbjct: 1082 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNTFECRGCKNK 1141
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1142 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1171
>XP_002274051.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] CAN72948.1 hypothetical protein VITISV_033708
[Vitis vinifera] CBI21848.3 unnamed protein product,
partial [Vitis vinifera]
Length = 1193
Score = 1671 bits (4328), Expect = 0.0
Identities = 827/930 (88%), Positives = 880/930 (94%), Gaps = 4/930 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 22 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 81
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F+E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKR+ KKG +
Sbjct: 82 FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 141
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+ E QE K+F+GKVPIMLRS+YCT+ EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 142 LEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPSSMFVRMLSR S KGGSSGQ+
Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRG+TVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 322 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+Y+QKCVD+GKDVNLQ+AI
Sbjct: 382 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 441
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 502 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 561
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP +TK+FVNGCWVGIHRNPD LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD
Sbjct: 562 SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 621
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDXXXXXXXMIS 2227
YGRCSRPLF+V+ QRLLI+K DI LQ R S D GWHDLV++GFIEYVD MIS
Sbjct: 622 YGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMIS 681
Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
MTINDL+ AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 682 MTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741
Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 742 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801
Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DG
Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 861
Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
LAPPGTRVSGEDVIIGKTTP++Q++S G RYTRRD STS+RHSESGMVDQVLLTTN D
Sbjct: 862 LAPPGTRVSGEDVIIGKTTPISQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 921
Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
GLRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 922 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGT 951
Score = 431 bits (1108), Expect = e-125
Identities = 207/210 (98%), Positives = 208/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 970 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1029
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1030 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1089
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1090 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1149
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1150 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>XP_020094305.1 DNA-directed RNA polymerase II subunit RPB2 [Ananas comosus]
OAY64594.1 DNA-directed RNA polymerase II subunit RPB2
[Ananas comosus]
Length = 1187
Score = 1668 bits (4320), Expect = 0.0
Identities = 823/929 (88%), Positives = 877/929 (94%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ+E
Sbjct: 19 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSE 78
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ +K++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVT RV KKG +
Sbjct: 79 FSETLHKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTYRVVKKGHD 138
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+ E QE K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 139 CEEVTETQEYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVL 198
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR S KGGSSGQ+
Sbjct: 199 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 258
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 259 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 318
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 319 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 378
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 379 AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 438
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKT++SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 439 KAKTVTSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 498
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 499 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 558
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 559 SPAVIPQAAKIFVNGCWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 618
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+NQRLLI+K DI LQ+R S +EGWHDLVA+GFIEY+D MISM
Sbjct: 619 YGRCSRPLFIVENQRLLIKKKDIRALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMISM 678
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDLV AR++P+EAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 679 TINDLVNARQNPDEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 738
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 739 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 798
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 799 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 858
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKT+P++Q++S G RYTRRD ST +RHSESGMVDQVLLTTN DG
Sbjct: 859 APPGTRVSGEDVIIGKTSPISQDDSQGQASRYTRRDHSTCLRHSESGMVDQVLLTTNADG 918
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 919 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 947
Score = 425 bits (1093), Expect = e-123
Identities = 204/210 (97%), Positives = 207/210 (98%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 966 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1025
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1026 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1085
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1086 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1145
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1146 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1175
>XP_010920288.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB2 [Elaeis guineensis]
Length = 1187
Score = 1663 bits (4306), Expect = 0.0
Identities = 820/929 (88%), Positives = 878/929 (94%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPGRQ++
Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGRQSD 76
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTK+V KKG +
Sbjct: 77 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKVIKKGHD 136
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+ E QE K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 137 CEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSM E+Q+RP S+MFVRMLSR S KGGSSGQ+
Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVRMLSRTSAKGGSSGQY 256
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 376
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 437 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEW TE+FEEI
Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP A+K+FVNG WVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 557 SPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 616
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+NQRLLI+K DI LQ+R S +EGWHDLVA+GFIEY+D MI+M
Sbjct: 617 YGRCSRPLFIVENQRLLIKKKDIQALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMIAM 676
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDLV AR++PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 856
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKT+P+ Q++S G RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 857 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVDQVLLTTNADG 916
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 945
Score = 432 bits (1111), Expect = e-126
Identities = 207/210 (98%), Positives = 209/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 964 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1023
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1024 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1083
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1084 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1143
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRMFT
Sbjct: 1144 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 1173
>XP_015690688.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
[Oryza brachyantha] XP_015690689.1 PREDICTED:
DNA-directed RNA polymerase II subunit RPB2 isoform X3
[Oryza brachyantha]
Length = 1219
Score = 1658 bits (4294), Expect = 0.0
Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 51 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 110
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 111 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 170
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+ E E K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 171 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 230
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 231 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 290
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 291 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 350
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 351 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 410
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 411 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 470
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 471 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 530
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 531 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 590
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 591 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 650
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+NQRLLI+K I LQ+R + +EGWHDLVA+GFIEY+D MISM
Sbjct: 651 YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 710
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 711 TINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 770
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 771 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 830
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 831 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 890
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKT+P+ Q+++ G RYT+RD STS+RHSESGMVDQVLLTTN DG
Sbjct: 891 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 950
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 951 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 979
Score = 425 bits (1093), Expect = e-123
Identities = 204/210 (97%), Positives = 207/210 (98%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 998 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1057
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1058 GFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1117
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1118 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1177
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1178 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1207
>XP_006650345.2 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Oryza brachyantha]
Length = 1254
Score = 1658 bits (4294), Expect = 0.0
Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 86 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 145
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 146 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 205
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+ E E K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 206 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 265
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 266 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 325
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 326 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 385
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 386 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 445
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 446 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 505
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 506 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 565
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 566 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 625
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 626 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 685
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+NQRLLI+K I LQ+R + +EGWHDLVA+GFIEY+D MISM
Sbjct: 686 YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 745
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDLV AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 746 TINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 805
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 806 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 865
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 866 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 925
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKT+P+ Q+++ G RYT+RD STS+RHSESGMVDQVLLTTN DG
Sbjct: 926 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 985
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 986 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 1014
Score = 425 bits (1093), Expect = e-123
Identities = 204/210 (97%), Positives = 207/210 (98%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 1033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1092
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1093 GFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1152
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1153 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1212
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1213 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1242
>XP_008801262.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Phoenix
dactylifera]
Length = 1187
Score = 1658 bits (4293), Expect = 0.0
Identities = 818/929 (88%), Positives = 876/929 (94%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPGRQ++
Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGRQSD 76
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTK+V KKG +
Sbjct: 77 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKVIKKGHD 136
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+ E QE K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 137 CEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSM E+Q+RP S+MFVRMLSR S KGGSSGQ+
Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVRMLSRTSAKGGSSGQY 256
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 376
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQAN AG RAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 437 KAKTITSGLKYSLATGNWGQANQAGARAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEW TE+FEEI
Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP A+K+FVNG WVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 557 SPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 616
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+NQRLLI+K I LQ+R S +EGWHDLVA+GFIEY+D MI+M
Sbjct: 617 YGRCSRPLFIVENQRLLIKKRHIQALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMIAM 676
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDLV AR++PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 856
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKT+P+ Q++S G RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 857 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVDQVLLTTNADG 916
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 945
Score = 430 bits (1105), Expect = e-125
Identities = 205/210 (97%), Positives = 209/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 964 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1023
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGR+L AMIF+GPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1024 GFETMYNGHTGRKLTAMIFIGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1083
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1084 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1143
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRMF+
Sbjct: 1144 TDIVQVHIPYACKLLFQELMAMAIAPRMFS 1173
>EEE59590.1 hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
Length = 1218
Score = 1658 bits (4293), Expect = 0.0
Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 50 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 109
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 110 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 169
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+ E E K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 170 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 229
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 230 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 289
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 290 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 349
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 350 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 409
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 410 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 469
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 470 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 529
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 589
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 590 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 649
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+NQRLLI+K I LQ+R + +EGWHDLVA+GFIEY+D MISM
Sbjct: 650 YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 709
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDL+ AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 710 TINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 769
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 770 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 829
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 830 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 889
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKT+P+ Q+++ G RYT+RD STS+RHSESGMVDQVLLTTN DG
Sbjct: 890 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 949
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 950 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 978
Score = 425 bits (1093), Expect = e-123
Identities = 204/210 (97%), Positives = 207/210 (98%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 997 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1056
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1057 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1116
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1117 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1176
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1177 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1206
>XP_015631661.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Oryza sativa
Japonica Group] ABF97884.1 DNA-directed RNA polymerase II
135 kDa polypeptide, putative, expressed [Oryza sativa
Japonica Group] EAY91202.1 hypothetical protein OsI_12811
[Oryza sativa Indica Group]
Length = 1222
Score = 1658 bits (4293), Expect = 0.0
Identities = 819/929 (88%), Positives = 873/929 (93%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 54 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 113
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 114 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 173
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+ E E K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 174 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 233
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 234 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 293
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 294 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 353
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 354 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 413
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GK+VNLQ+AI
Sbjct: 414 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 473
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 474 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 533
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 534 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 593
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 594 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 653
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+NQRLLI+K I LQ+R + +EGWHDLVA+GFIEY+D MISM
Sbjct: 654 YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 713
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDL+ AR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 714 TINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 773
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 774 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 833
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 834 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 893
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKT+P+ Q+++ G RYT+RD STS+RHSESGMVDQVLLTTN DG
Sbjct: 894 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 953
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 954 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 982
Score = 425 bits (1093), Expect = e-123
Identities = 204/210 (97%), Positives = 207/210 (98%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 1001 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1060
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1061 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1120
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1121 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1180
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1181 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1210
>OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta]
Length = 1192
Score = 1657 bits (4290), Expect = 0.0
Identities = 821/930 (88%), Positives = 873/930 (93%), Gaps = 4/930 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ YK+ FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 81 FAETIYKICFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 260
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 261 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 321 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 380
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 440
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP ATK+FVNGCWVGIHRNPD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRNPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
YGRCSRPLF+V+ QRLLI+K DI LQ+R SS+E GWHDLVA+GFIEY+D MIS
Sbjct: 621 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 680
Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
MTI+DLVQAR +PEEAY TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681 MTIHDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800
Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 801 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 860
Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
LAPPGTRVSGEDVIIGKTTP++QE++ G RYTRRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPISQEDAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 920
Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 921 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 950
Score = 430 bits (1105), Expect = e-125
Identities = 206/210 (98%), Positives = 208/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMR
Sbjct: 969 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMR 1028
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1029 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1088
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1089 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1148
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1149 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1178
>XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ricinus
communis] EEF43271.1 DNA-directed RNA polymerase II
subunit, putative [Ricinus communis]
Length = 1194
Score = 1656 bits (4289), Expect = 0.0
Identities = 821/930 (88%), Positives = 874/930 (93%), Gaps = 4/930 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
YGRCSRPLF+V+ QRLLI+K DI LQ+R SS+E GWHDLVA+GFIEY+D MIS
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
MTI+DLVQAR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
LAPPGTRVSGEDVIIGKTTP+ QEE+ G RYTRRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 952
Score = 431 bits (1108), Expect = e-125
Identities = 207/210 (98%), Positives = 208/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 971 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1030
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1031 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1090
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1091 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1150
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1151 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>KMZ63282.1 DNA-directed RNA polymerase [Zostera marina]
Length = 1186
Score = 1656 bits (4288), Expect = 0.0
Identities = 813/929 (87%), Positives = 876/929 (94%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA +EIRPESQHNPGRQ++
Sbjct: 18 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAHMEIRPESQHNPGRQSD 77
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
+E+ YK++FGQIYLS+PMMTE+DGE++TLFPKAARLRNLTYSAPLYVDV++R+ KKG +
Sbjct: 78 CVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSRRIIKKGHD 137
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+AE Q+ K+F+GKVPIMLRS+YCTL + EKDL ELGECPYDQGGYF+INGSEKVL
Sbjct: 138 CEEVAESQDFAKVFIGKVPIMLRSSYCTLYQSSEKDLTELGECPYDQGGYFVINGSEKVL 197
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYVGEVRSMAE+QNRP SSMFVRML+R S KGGSSGQ+
Sbjct: 198 IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPASSMFVRMLARTSAKGGSSGQY 257
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 258 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 317
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRG+TVGVT++KRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 318 VALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 377
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SY+QKCVD+GKDVNLQ+AI
Sbjct: 378 ALGRRQEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVNLQFAI 437
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA
Sbjct: 438 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 497
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEWSTE+FEEI
Sbjct: 498 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 557
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP ATK+FVNGCWVGIHRNPD LV TLRQLRRQVDVN EVGV+RDI LKELRLYTD
Sbjct: 558 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 617
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V+ QRLLI+K DI LQ+R + +EGWHDLV +GFIEY+D MISM
Sbjct: 618 YGRCSRPLFIVERQRLLIKKRDIRALQQRETQEEGWHDLVTKGFIEYIDTEEEETTMISM 677
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDL+ AR++P +AY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 678 TINDLINARQNPNDAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 737
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 738 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 797
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+L+KEDFG P+RENT GMRHGSYDKLD DGL
Sbjct: 798 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGCPNRENTMGMRHGSYDKLDIDGL 857
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKTTP+ Q+E+ G RYTRRD STS+RHSESGMVDQVLLTTN DG
Sbjct: 858 APPGTRVSGEDVIIGKTTPIVQDETQGQATRYTRRDHSTSLRHSESGMVDQVLLTTNADG 917
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 918 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 946
Score = 417 bits (1073), Expect = e-120
Identities = 199/210 (94%), Positives = 206/210 (98%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 965 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1024
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFE MYNGHTGR+L A+IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1025 GFEAMYNGHTGRKLTALIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1084
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKK+S++CRGCKNK
Sbjct: 1085 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEQCGLIAIANLKKSSYECRGCKNK 1144
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELM+MAIAPRM T
Sbjct: 1145 TDIVQVHIPYACKLLFQELMSMAIAPRMMT 1174
>XP_003561873.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Brachypodium
distachyon] KQK13978.1 hypothetical protein BRADI_1g13720
[Brachypodium distachyon]
Length = 1228
Score = 1656 bits (4288), Expect = 0.0
Identities = 818/929 (88%), Positives = 871/929 (93%), Gaps = 3/929 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ E
Sbjct: 60 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 119
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ +K++FGQIYLSKPMMTEADGE++TLFPK+ARLRNLTYSAPLYVDV+ RV KKG +
Sbjct: 120 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVVKKGHD 179
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
EE+ E E K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYF+INGSEKVL
Sbjct: 180 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVL 239
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSRSG-KGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNKFAYV EVRSMAENQNRP SSMFVRMLSR+G KGGSSGQ+
Sbjct: 240 IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 299
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR+DIPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 300 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 359
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLL+C
Sbjct: 360 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 419
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 420 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 479
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 480 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 539
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS+ANPILEFLEEW TE+FEEI
Sbjct: 540 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 599
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP A K+FVNGCWVGIHRNPD LV TLR+LRRQ+DVN EVGVVRDI LKELRLYTD
Sbjct: 600 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 659
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDEGWHDLVARGFIEYVDXXXXXXXMISM 2230
YGRCSRPLF+V QRLLI+K I LQ+R + DEGWHDLVA+GFIEY+D MISM
Sbjct: 660 YGRCSRPLFIVDGQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDTEEEETTMISM 719
Query: 2231 TINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2410
TINDLV AR +P+EAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 720 TINDLVSARNNPQEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 779
Query: 2411 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2590
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 780 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 839
Query: 2591 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDGL 2770
VIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKE+FGRP+RENT GMRHGSYDKLD+DGL
Sbjct: 840 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 899
Query: 2771 APPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQDG 2944
APPGTRVSGEDVIIGKT+P+ Q+++ G RY++RD STS+RHSESGMVDQVLLTTN DG
Sbjct: 900 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYSKRDHSTSLRHSESGMVDQVLLTTNADG 959
Query: 2945 LRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
LRFVK+RMRSVRIPQIGDKFSSRHGQKGT
Sbjct: 960 LRFVKVRMRSVRIPQIGDKFSSRHGQKGT 988
Score = 425 bits (1093), Expect = e-123
Identities = 204/210 (97%), Positives = 207/210 (98%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 1007 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1066
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGR+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1067 GFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1126
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1127 LRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1186
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1187 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1216
>XP_016179997.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Arachis
ipaensis]
Length = 1194
Score = 1655 bits (4287), Expect = 0.0
Identities = 820/930 (88%), Positives = 872/930 (93%), Gaps = 4/930 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRASSKGGSSGQY 262
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIRS+IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 263 IRATLPYIRSEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVTKEKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR Y+QKCVD+GKDVNLQ+AI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A+PILEFLEEW TE+FEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAASPILEFLEEWGTENFEEI 562
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
YGRCSRPLF+V QRLLI+K DI LQ+R S +E GWHDLV++GFIEY+D MIS
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 682
Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
MTINDLVQAR +PEEAY TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 862
Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
LAPPGTRVSGEDVIIGKTTP++QEE+ G RYTRRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 952
Score = 427 bits (1099), Expect = e-124
Identities = 205/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 971 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1030
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1031 GFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1090
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSF+CRGCKNK
Sbjct: 1091 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNK 1150
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQV+IPYACKLLFQELMAMAIAPRM T
Sbjct: 1151 TDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha
curcas]
Length = 1193
Score = 1654 bits (4284), Expect = 0.0
Identities = 820/930 (88%), Positives = 873/930 (93%), Gaps = 4/930 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q +
Sbjct: 22 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 81
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 82 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 141
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 142 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPSSMFVRMLSR S KGGSSGQ+
Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGE CETKKAYYFGYIIHRLLLC
Sbjct: 322 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLT+DVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 382 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKDVRSYVQKCVDNGKDVNLQFAI 441
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 502 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 561
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 562 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 621
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
YGRCSRPLF+V+ QRLLI+K DI LQ+R SS+E GWHDLVA+GFIEY+D MIS
Sbjct: 622 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 681
Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
MTI+DLVQAR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 682 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741
Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 742 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801
Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 861
Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
LAPPGTRVSGEDVIIGKTTP+ QEE+ G RYTRRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 862 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 921
Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 922 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 951
Score = 431 bits (1108), Expect = e-125
Identities = 207/210 (98%), Positives = 208/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR
Sbjct: 970 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 1029
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1030 GFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1089
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1090 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1149
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELMAMAIAPRM T
Sbjct: 1150 TDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>XP_010529417.1 PREDICTED: DNA-directed RNA polymerase II subunit 2-like [Tarenaya
hassleriana]
Length = 1192
Score = 1654 bits (4283), Expect = 0.0
Identities = 815/930 (87%), Positives = 872/930 (93%), Gaps = 4/930 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAENQNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSTMFVRMLSRASSKGGSSGQY 259
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IR TLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MME LRPSLEEAFVIQ+QQ
Sbjct: 260 IRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEFLRPSLEEAFVIQNQQ 319
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT++KRIKYAKDILQKEMLPHVG G+ CETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTRDKRIKYAKDILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 379
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
A+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 380 AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKT++SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP ATK+FVNGCWVGIHR+PD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTSSDE-GWHDLVARGFIEYVDXXXXXXXMIS 2227
YGRCSRPLF+V+NQ LLI+K DI LQ+R SS+E GWHDLVA+GFIEY+D MIS
Sbjct: 620 YGRCSRPLFIVENQALLIKKKDIYALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
MTINDLVQAR PE+AY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARLRPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
LAPPGTRVSGEDVIIGKTTP++QEE+ G RYTRRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPLSQEEAQGQASRYTRRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 949
Score = 416 bits (1070), Expect = e-120
Identities = 199/210 (94%), Positives = 204/210 (97%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTV+NIS+ALHKCGYQ R
Sbjct: 968 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVENISRALHKCGYQQR 1027
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFE MYNGHTGR L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1028 GFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1087
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIA+ANLKKNSF+CRGCKNK
Sbjct: 1088 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCECCGLIALANLKKNSFECRGCKNK 1147
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQVHIPYACKLLFQELM+MAIAPRM T
Sbjct: 1148 TDIVQVHIPYACKLLFQELMSMAIAPRMLT 1177
>XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Theobroma
cacao] EOY28253.1 DNA-directed RNA polymerase family
protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 1654 bits (4283), Expect = 0.0
Identities = 818/930 (87%), Positives = 873/930 (93%), Gaps = 4/930 (0%)
Frame = +2
Query: 254 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQTE 433
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q++
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 434 FIESYYKVTFGQIYLSKPMMTEADGESSTLFPKAARLRNLTYSAPLYVDVTKRVFKKGIE 613
F E+ YK++FGQIYLSKPMMTE+DGE++TLFPKAARLRNLTYSAPLYVDVTKRV KKG +
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 614 GEELAEKQELGKIFLGKVPIMLRSTYCTLASTQEKDLQELGECPYDQGGYFIINGSEKVL 793
GEE+ E Q+ K+F+GKVPIMLRS+YCTL EKDL ELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 794 IAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPPSSMFVRMLSR-SGKGGSSGQF 970
IAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAE+QNRPPS+MFVRMLSR S KGGSSGQ+
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 971 IRATLPYIRSDIPIIIVFRALGFVADKDILEHICYDFSDGPMMELLRPSLEEAFVIQSQQ 1150
IRATLPYIR++IPIIIVFRALGFVADKDILEHICYDFSD MMELLRPSLEEAFVIQ+QQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 1151 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGELCETKKAYYFGYIIHRLLLC 1330
VALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVG+ CETKKAYYFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379
Query: 1331 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYLQKCVDSGKDVNLQYAI 1510
ALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY+QKCVD+GKDVNLQ+AI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 1511 KAKTISSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1690
KAKTI+SGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1691 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSSANPILEFLEEWSTESFEEI 1870
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS+A PILEFLEEW TE+FEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1871 SPAVIPTATKVFVNGCWVGIHRNPDQLVNTLRQLRRQVDVNPEVGVVRDIPLKELRLYTD 2050
SPAVIP ATK+FVNGCWVG+HRNPD LV TLR+LRR+VDVN EVGVVRDI LKELR+YTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 2051 YGRCSRPLFVVKNQRLLIRKPDIIRLQERTS-SDEGWHDLVARGFIEYVDXXXXXXXMIS 2227
YGRCSRPLF+V+ QRLLI+K DI LQ+R S D GWHDLVA+GFIEY+D MIS
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 2228 MTINDLVQARRHPEEAYTTTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2407
MTINDLVQAR +PEEAY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2408 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2587
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 2588 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGSLVKEDFGRPSRENTAGMRHGSYDKLDEDG 2767
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMG+LVKEDFGRP R NT GMRHGSYDKLD+DG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 2768 LAPPGTRVSGEDVIIGKTTPVTQEESMG--GRYTRRDQSTSMRHSESGMVDQVLLTTNQD 2941
LAPPGTRVSGEDVIIGKTTP++QEE+ G RY+RRD S S+RHSE+G+VDQVLLTTN D
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 2942 GLRFVKIRMRSVRIPQIGDKFSSRHGQKGT 3031
GLRFVK+R+RSVRIPQIGDKFSSRHGQKGT
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGT 949
Score = 427 bits (1099), Expect = e-124
Identities = 205/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 3033 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMR 3212
PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMR
Sbjct: 968 PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMR 1027
Query: 3213 GFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 3392
GFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG
Sbjct: 1028 GFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGG 1087
Query: 3393 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFDCRGCKNK 3572
LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF+CRGCKNK
Sbjct: 1088 LRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNK 1147
Query: 3573 TDIVQVHIPYACKLLFQELMAMAIAPRMFT 3662
TDIVQV+IPYACKLLFQELMAMAIAPRM T
Sbjct: 1148 TDIVQVYIPYACKLLFQELMAMAIAPRMLT 1177