BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00009175
         (1367 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJA90770.1 RNA-dependent RNA polymerase 2 [Ephedra trifurca]          829   0.0  
AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis]         540   e-179
AJP06346.1 RDR2 [Pinus tabuliformis]                                  532   e-176
AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta]            532   e-176
AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba]             531   e-176
XP_010271987.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nelumb...   451   e-145
APO15851.1 RNA-dependent RNA polymerase 1 [Sesuvium portulacastrum]   434   e-138
CDP05599.1 unnamed protein product [Coffea canephora]                 433   e-138
XP_019703492.1 PREDICTED: probable RNA-dependent RNA polymerase ...   433   e-138
XP_016510714.1 PREDICTED: RNA-dependent RNA polymerase 1-like [N...   419   e-137
XP_015581229.1 PREDICTED: RNA-dependent RNA polymerase 2 isoform...   427   e-137
XP_006469265.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform...   432   e-137
XP_015382841.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform...   432   e-137
XP_002311536.1 RNA-directed RNA Polymerase family protein [Popul...   431   e-137
XP_002511431.1 PREDICTED: RNA-dependent RNA polymerase 2 isoform...   427   e-137
KNA07851.1 hypothetical protein SOVF_168010 isoform B, partial [...   430   e-137
CDP05596.1 unnamed protein product [Coffea canephora]                 430   e-137
KNA07850.1 hypothetical protein SOVF_168010 isoform A, partial [...   430   e-137
XP_013466607.1 RNA-dependent RNA polymerase family protein [Medi...   413   e-137
XP_011024314.1 PREDICTED: RNA-dependent RNA polymerase 1-like is...   430   e-137

>AJA90770.1 RNA-dependent RNA polymerase 2 [Ephedra trifurca]
          Length = 1111

 Score =  829 bits (2142), Expect = 0.0
 Identities = 400/410 (97%), Positives = 404/410 (98%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEELETHVI 1186
            LSELKSKCRIFVPRGNVLIGCLDET TLDYGEVFIQVSKTKIKGNYDG SSLEELE HVI
Sbjct: 702  LSELKSKCRIFVPRGNVLIGCLDETGTLDYGEVFIQVSKTKIKGNYDGASSLEELERHVI 761

Query: 1185 EGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDGDLYF 1006
            EGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDGDLYF
Sbjct: 762  EGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDGDLYF 821

Query: 1005 VSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANAHVVH 826
            VSWDPMLVPPK+EPEEPMDY GRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANAHVVH
Sbjct: 822  VSWDPMLVPPKKEPEEPMDYTGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANAHVVH 881

Query: 825  ADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMYESTS 646
            ADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMYESTS
Sbjct: 882  ADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMYESTS 941

Query: 645  ILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDSKLAA 466
            ILGKLYRDSYDRMEEDP VLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDSKLAA
Sbjct: 942  ILGKLYRDSYDRMEEDPHVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDSKLAA 1001

Query: 465  LMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDESCKL 286
            LMKYYGVQNEAE+ISGNIRMPSRGTINEKKKHSDRKDKILMAVEALR EARGWFDESCKL
Sbjct: 1002 LMKYYGVQNEAEMISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRIEARGWFDESCKL 1061

Query: 285  HHKSFALASAWYHVTYHSSYWSKGNLISFPWIRYDLMLKTKRYNDTKIQK 136
            HHK+FALASAWYHVTYHSSYWSKGNLISFPWIRYDL+LKTKRYNDTKIQK
Sbjct: 1062 HHKNFALASAWYHVTYHSSYWSKGNLISFPWIRYDLLLKTKRYNDTKIQK 1111


>AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis]
          Length = 1114

 Score =  540 bits (1390), Expect = e-179
 Identities = 265/412 (64%), Positives = 320/412 (77%), Gaps = 5/412 (1%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSS---LEELET 1195
            L EL++KCRIF+P+G VLIGCLDET TL+YGEVFIQVSK   K   DG S+   ++  +T
Sbjct: 703  LLELRTKCRIFIPKGRVLIGCLDETGTLNYGEVFIQVSKANTKIYDDGLSASGFIDRDKT 762

Query: 1194 HVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVH--MVDCAVFPQKGNRPHPNECSGSDLD 1021
            ++++G VVVAKNPCLHPGDIR L AVNVPGL H  MVDC VFPQKG RPHP ECSGSDLD
Sbjct: 763  YILQGKVVVAKNPCLHPGDIRVLHAVNVPGLDHEYMVDCLVFPQKGERPHPYECSGSDLD 822

Query: 1020 GDLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIAN 841
            GDLYFVSWD +L+PP  E + PMDY+GR  I+LDH+VTI+EIQEYFVNYMLNDSLG+IAN
Sbjct: 823  GDLYFVSWDELLIPP--EQDSPMDYVGRQPIKLDHDVTIKEIQEYFVNYMLNDSLGVIAN 880

Query: 840  AHVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPM 661
            AHVV+ADR+PLKARS KC  LARLH+KAVDFAKTG PAEMPL LIP+E+PDFMEK  KPM
Sbjct: 881  AHVVYADRDPLKARSRKCQLLARLHSKAVDFAKTGVPAEMPLSLIPKEFPDFMEKANKPM 940

Query: 660  YESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYD 481
            Y S+ ILGKLYR   D  +E P   M +R      YD   + EGF++ + +A   KSWYD
Sbjct: 941  YISSGILGKLYRAIKDSSKEMPCASMSTREDAHKAYDNDLKVEGFEEFIDDALTQKSWYD 1000

Query: 480  SKLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFD 301
            SKL ALM+YYGVQ+EAEI+SGNI   S+    EKK++ D K+K+++AV ALR EAR WF 
Sbjct: 1001 SKLGALMEYYGVQSEAEILSGNIIHFSKFFDKEKKRYGDIKEKVMVAVRALRNEARAWFQ 1060

Query: 300  ESCKLHHKSFALASAWYHVTYHSSYWSKGNLISFPWIRYDLMLKTKRYNDTK 145
            E+C++H K  ALA AWYHVTYH  YW++ + ISFPW+ YD++L  K++N  K
Sbjct: 1061 ETCRVHRKDSALACAWYHVTYHPDYWTEVHFISFPWVVYDVLLNVKKFNHLK 1112


>AJP06346.1 RDR2 [Pinus tabuliformis]
          Length = 1123

 Score =  532 bits (1371), Expect = e-176
 Identities = 266/421 (63%), Positives = 320/421 (76%), Gaps = 14/421 (3%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSS---LEELET 1195
            L EL++KCRIFVP+G VLIGCLDET TL+YGEVFIQVSK   K   DG S+   ++  +T
Sbjct: 703  LLELRTKCRIFVPKGRVLIGCLDETGTLNYGEVFIQVSKANTKIYDDGLSASGFIDRDKT 762

Query: 1194 HVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVH--MVDCAVFPQKGNRPHPNECSGSDLD 1021
            ++++G VVVAKNPCLHPGDIR L AVNVPGL H  MVDC VFPQKG RPHP ECSGSDLD
Sbjct: 763  YILQGKVVVAKNPCLHPGDIRVLHAVNVPGLDHEYMVDCLVFPQKGERPHPYECSGSDLD 822

Query: 1020 GDLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTI---------EEIQEYFVNYML 868
            GDLYFVSWD +L+PP  E + PMDY+GR  I+LDH+VTI         +EIQEYFVNYML
Sbjct: 823  GDLYFVSWDELLIPP--EQDSPMDYVGRQPIKLDHDVTIKDLSNAFLIQEIQEYFVNYML 880

Query: 867  NDSLGIIANAHVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPD 688
            NDSLG+IANAHVV+ADR+PLKARS+KC  LARLH+KAVDFAKTG PAEMPL LIP+E+PD
Sbjct: 881  NDSLGVIANAHVVYADRDPLKARSQKCQLLARLHSKAVDFAKTGVPAEMPLSLIPKEFPD 940

Query: 687  FMEKEGKPMYESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKE 508
            FMEK  KPMY S+ ILGKLYR   D  +E P   M +R      YD   + EGF++ +  
Sbjct: 941  FMEKGNKPMYISSGILGKLYRAIKDSSKEIPCASMSTREDAHKAYDNDLKVEGFEEFIDN 1000

Query: 507  AELHKSWYDSKLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEAL 328
            A   KSWYDSKL ALM+YYGVQ+EAEI+SGNI   S+    EKK++ D K+K+++AV AL
Sbjct: 1001 ALTQKSWYDSKLGALMEYYGVQSEAEILSGNIIHFSKFFDKEKKRYGDIKEKVMVAVRAL 1060

Query: 327  RTEARGWFDESCKLHHKSFALASAWYHVTYHSSYWSKGNLISFPWIRYDLMLKTKRYNDT 148
            R EAR WF E+C++H K  ALA AWYHVTYH  YW++ + ISFPW+ YD++L  K++N  
Sbjct: 1061 RNEARAWFQETCRVHRKDSALACAWYHVTYHPDYWTEVHFISFPWVVYDVLLNVKKFNHL 1120

Query: 147  K 145
            K
Sbjct: 1121 K 1121


>AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta]
          Length = 1117

 Score =  532 bits (1370), Expect = e-176
 Identities = 258/411 (62%), Positives = 315/411 (76%), Gaps = 4/411 (0%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEE----LE 1198
            LS+L++KCRIFV +G VL+GCLDET  L+YGEVF+QVS+   K  YDG +S         
Sbjct: 705  LSDLRTKCRIFVSKGRVLMGCLDETEVLNYGEVFVQVSRINTKFCYDGLASFGYDKWGKS 764

Query: 1197 THVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDG 1018
              +++G VVVAKNPCLHPGDIR L AV+VPGL HMVDC VFPQKG RPHPNECSGSDLDG
Sbjct: 765  NCIVQGKVVVAKNPCLHPGDIRLLHAVDVPGLHHMVDCLVFPQKGERPHPNECSGSDLDG 824

Query: 1017 DLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANA 838
            DLYFVSWD +L+PP ++  +PMDY+GR  I+LDH VTIEEIQEYFVNYMLNDSLG+IAN 
Sbjct: 825  DLYFVSWDELLIPPDQD--QPMDYVGRQPIQLDHEVTIEEIQEYFVNYMLNDSLGVIANT 882

Query: 837  HVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMY 658
            HVV+ADREP KARS  C  LA LH+KAVDF KTGAPAEMPL L P+EYPDFMEK  KPMY
Sbjct: 883  HVVYADREPSKARSPTCQRLAMLHSKAVDFPKTGAPAEMPLLLFPKEYPDFMEKWDKPMY 942

Query: 657  ESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDS 478
             ST ILGKLYR   D  +E+  + + +    +  YD   + EG  + +++A +HKSWYD+
Sbjct: 943  MSTGILGKLYRAVKDNSKENNFISIFTGEDVQNAYDNDLKVEGLHNFVQDALMHKSWYDT 1002

Query: 477  KLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDE 298
            KLAALM+YYGV++EAEI+SGNI   S+    +KKK+ D K+KI++AV +LR EARGWF++
Sbjct: 1003 KLAALMEYYGVKSEAEIVSGNINRFSKFFEKDKKKYGDIKEKIMVAVRSLRKEARGWFED 1062

Query: 297  SCKLHHKSFALASAWYHVTYHSSYWSKGNLISFPWIRYDLMLKTKRYNDTK 145
            SCK+HH   A+ASAWYHVTYH  YW+K + ISFPW+ YD++L  K  N  K
Sbjct: 1063 SCKVHHNHSAMASAWYHVTYHPDYWTKVHFISFPWVIYDILLNIKSLNQRK 1113


>AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba]
          Length = 1114

 Score =  531 bits (1367), Expect = e-176
 Identities = 253/408 (62%), Positives = 321/408 (78%), Gaps = 4/408 (0%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSL----EELE 1198
            LSEL++KCRIF+P+G VL+GCLDET  L+YGEVF+Q+S+   K  YDG S+     ++  
Sbjct: 707  LSELRTKCRIFIPKGRVLMGCLDETGALNYGEVFVQISRVNTK-LYDGLSTFGFKKKDKT 765

Query: 1197 THVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDG 1018
              +++G V+VAKNPCLHPGDIR L AVNVPGL HMVDC VFPQKG+RPHPNECSGSDLDG
Sbjct: 766  PCILQGKVIVAKNPCLHPGDIRVLHAVNVPGLHHMVDCLVFPQKGDRPHPNECSGSDLDG 825

Query: 1017 DLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANA 838
            DLYF SWD +L+PP+++P  P DY+GR  I+LDH VTIEEIQEYFVNYMLND+LG+IAN 
Sbjct: 826  DLYFGSWDELLLPPEQDP--PTDYIGRQPIQLDHEVTIEEIQEYFVNYMLNDTLGVIANT 883

Query: 837  HVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMY 658
            +VVHADREP KARS+KC  LARL +KAVDF K GA AEMPL LIP+EYPDFMEKE KPMY
Sbjct: 884  YVVHADREPSKARSKKCQLLARLQSKAVDFPKKGASAEMPLSLIPKEYPDFMEKEDKPMY 943

Query: 657  ESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDS 478
             S+ ILGKLYR   D + ++ ++   +R      YDK  E EGF++ ++++ +HK WYD+
Sbjct: 944  TSSGILGKLYRMVKD-ISKESRIFHSTREDAHKAYDKDLEVEGFENFIEDSLMHKKWYDT 1002

Query: 477  KLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDE 298
            KLA+LM+YYG+Q+EAEI+ GNI   S+    EK+++ D K+KI++AV++LRTEARGWF +
Sbjct: 1003 KLASLMEYYGIQSEAEIVGGNINRFSKFFDKEKRRYGDIKEKIMVAVKSLRTEARGWFQD 1062

Query: 297  SCKLHHKSFALASAWYHVTYHSSYWSKGNLISFPWIRYDLMLKTKRYN 154
            SCK HH   A+A AWYHVTYH  YW++G+ ISFPW+ YD++L  K+ N
Sbjct: 1063 SCKEHHNDAAIACAWYHVTYHPDYWTQGHFISFPWVIYDVLLNIKKNN 1110


>XP_010271987.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
          Length = 1115

 Score =  451 bits (1159), Expect = e-145
 Identities = 221/406 (54%), Positives = 287/406 (70%), Gaps = 5/406 (1%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEELE--TH 1192
            LS+++SKCRI VP+G VL+GCLDET  L+YG+VFI+V+ TK +  +D  S   +++  T 
Sbjct: 706  LSDIRSKCRILVPKGRVLLGCLDETGILNYGQVFIRVTMTKAEQCHDDQSFFHQVDETTS 765

Query: 1191 VIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVH--MVDCAVFPQKGNRPHPNECSGSDLDG 1018
            ++ G VV+ KNPCLHPGDIR L A+    L    +VDC VFPQKG RPHPNECSG DLDG
Sbjct: 766  IVIGKVVITKNPCLHPGDIRVLDAIYESALEEKGLVDCLVFPQKGERPHPNECSGGDLDG 825

Query: 1017 DLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANA 838
            DL+FV WD  L+P   + + PMDY+GR +  +DH VT+EEIQ+YFVNYM+ND+LG+I+ A
Sbjct: 826  DLFFVCWDENLIP--SQTDTPMDYIGRRSRLMDHEVTLEEIQKYFVNYMINDTLGVISTA 883

Query: 837  HVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMY 658
            HV+HADREP KARS KCL+LA LH+ AVDFAKTGAPAEMP  L P+EYPDFME+  +PMY
Sbjct: 884  HVIHADREPSKARSPKCLQLAALHSMAVDFAKTGAPAEMPRVLKPKEYPDFMERGDRPMY 943

Query: 657  ESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDS 478
             S  ILGKLYR + D  +      + +  V +  YDK  E  GF+  ++ AE HK  Y  
Sbjct: 944  ASPGILGKLYRSTIDSTKNQEPDFVWNEEVAQAAYDKDLEVRGFESFVETAESHKKLYTE 1003

Query: 477  KLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDE 298
            KL+ LM YYG ++E EI++GN+R PS     +K ++ + KD++L+AV  L+ EA+GWF  
Sbjct: 1004 KLSTLMNYYGARSEDEILTGNLRSPSLCLQRDKIRYGEMKDRVLIAVRNLQKEAKGWFHS 1063

Query: 297  SCKLHHKSFALASAWYHVTYHSSYWSKG-NLISFPWIRYDLMLKTK 163
            SCK  H+   +ASAWYHVTYH  Y   G N +SFPWI  D++L  K
Sbjct: 1064 SCK-SHECHKMASAWYHVTYHPKYCHNGMNSLSFPWILDDILLNIK 1108


>APO15851.1 RNA-dependent RNA polymerase 1 [Sesuvium portulacastrum]
          Length = 1128

 Score =  434 bits (1116), Expect = e-138
 Identities = 219/419 (52%), Positives = 282/419 (67%), Gaps = 17/419 (4%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEELET--- 1195
            L EL++K RIFVPRG  ++GCLDET+ L+YG+VF+QVS  + +    G+  L  + T   
Sbjct: 695  LQELRTKSRIFVPRGRAMMGCLDETKALEYGQVFVQVSGARFRNV--GNELLTHVGTEYE 752

Query: 1194 ---HVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDL 1024
               +V++G VVVAKNPCLHPGD+R L AV+VP L HMVDC +FPQKGNRPHPNECSGSDL
Sbjct: 753  PCNYVVKGKVVVAKNPCLHPGDVRVLMAVDVPSLHHMVDCVIFPQKGNRPHPNECSGSDL 812

Query: 1023 DGDLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIA 844
            DGD+YFV WD  L+PP++    PMDY       LDH+VTIEE+ EYF NY++NDSLGIIA
Sbjct: 813  DGDIYFVCWDSDLIPPRQVA--PMDYSPAKCEELDHDVTIEEVMEYFANYIINDSLGIIA 870

Query: 843  NAHVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKP 664
            NAH   AD+EP KA S  C+ELA+L + AVDF KTG PA +P  L  +EYPDFMEK  KP
Sbjct: 871  NAHTAFADKEPGKAMSSSCIELAKLFSIAVDFPKTGVPAVIPRNLYVKEYPDFMEKPDKP 930

Query: 663  MYESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWY 484
             YES +++GKL+R+  +R  + P +   +  +   +YD+  EY+GF+DHL +A  +KS Y
Sbjct: 931  TYESVNVIGKLFREVKERSPQAPSIRRFTLEIAMRSYDRDMEYDGFEDHLADAHYYKSQY 990

Query: 483  DSKLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWF 304
            D KL  LM+YYG++ EAEI+SGNI   S      K       + I MAV +LR EAR WF
Sbjct: 991  DFKLGNLMEYYGIKTEAEILSGNIMRMSNSFDRRKD-----VEAITMAVRSLRKEARTWF 1045

Query: 303  DE----SCKLHHKSFALASAWYHVTYHSSYW-------SKGNLISFPWIRYDLMLKTKR 160
            +E    S       +A ASAWYHVTYH SYW       ++ + +SFPW  YD ++  K+
Sbjct: 1046 NEKGTDSSSGADNMYAKASAWYHVTYHPSYWGSYNEGMNRDHFLSFPWSVYDRLITIKK 1104


>CDP05599.1 unnamed protein product [Coffea canephora]
          Length = 1113

 Score =  433 bits (1114), Expect = e-138
 Identities = 216/417 (51%), Positives = 286/417 (68%), Gaps = 7/417 (1%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEELETHVI 1186
            L EL++K RIF+P G  +IGCLDETRTL+YG+VF+Q+S     G +  DS+    +  ++
Sbjct: 690  LLELRTKTRIFIPNGRSMIGCLDETRTLEYGQVFVQLSSAG-HGQFYDDSNQYSEQNVIL 748

Query: 1185 EGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDGDLYF 1006
            E  VVVAKNPCLHPGD+R LKAVN+P L HM+DC VFPQKG RPHPNECSGSDLDGD YF
Sbjct: 749  EEKVVVAKNPCLHPGDVRILKAVNLPALHHMMDCVVFPQKGKRPHPNECSGSDLDGDTYF 808

Query: 1005 VSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANAHVVH 826
            V WDP L+PP+++   PMDY   P ++LDH VTIEE++EYF +Y++N+SLGIIANAH V 
Sbjct: 809  VCWDPDLIPPRQD--RPMDYTPAPTMQLDHKVTIEEVEEYFTDYIVNNSLGIIANAHTVF 866

Query: 825  ADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMYESTS 646
            ADREPLKARSE CLELA LH+ AVDF KTG PAE+P  L  +E+PDFMEK  KPMY+S  
Sbjct: 867  ADREPLKARSEPCLELAELHSIAVDFPKTGVPAEIPSHLRVKEFPDFMEKSDKPMYDSQR 926

Query: 645  ILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDSKLAA 466
            ++GKL+R+   +      +   ++ V + +YD   E +GF+D++ EA  +KS YD KL  
Sbjct: 927  VIGKLFREVKGKAPLTSSIKSFTKQVARKSYDSDMEVDGFEDYIAEAFDYKSEYDYKLGN 986

Query: 465  LMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDESCKL 286
            LM YYG++ EAEI+SG I   SR          +  + +  A+ +LR EA+ WF+ +   
Sbjct: 987  LMDYYGIETEAEILSGGIMKMSRSF-----DRRNDAEAVGRAMTSLRKEAKTWFNTNGDH 1041

Query: 285  HHKSFALASAWYHVTYHSSYW-------SKGNLISFPWIRYDLMLKTKRYNDTKIQK 136
               + A ASAWYHVTYH  YW       ++ + ISFPW  YD +++ K+ +  + Q+
Sbjct: 1042 FGDACAKASAWYHVTYHPKYWGCYNKGLNRAHYISFPWCVYDKLIQIKKASIRRSQQ 1098


>XP_019703492.1 PREDICTED: probable RNA-dependent RNA polymerase 2 [Elaeis
            guineensis]
          Length = 1117

 Score =  433 bits (1114), Expect = e-138
 Identities = 215/415 (51%), Positives = 292/415 (70%), Gaps = 5/415 (1%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIK---GNYDGDSSLEELET 1195
            LS+++SKCRIFVP+G VL+GCLDET +LDYG+V+++++ TK +    N      +++   
Sbjct: 701  LSDIRSKCRIFVPKGRVLLGCLDETGSLDYGQVYVKITMTKEELQDTNQTFFDKVDQTAA 760

Query: 1194 HVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHM--VDCAVFPQKGNRPHPNECSGSDLD 1021
             VI+  VVV +NPCLHPGD+R L+AV  P L +M  VDC VFPQ+G RPHP+ECSG DLD
Sbjct: 761  AVIQ-KVVVTRNPCLHPGDVRVLQAVYNPQLDNMGLVDCIVFPQRGRRPHPSECSGGDLD 819

Query: 1020 GDLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIAN 841
            GDLYFV WD  L+PPK +   PMDY  R     DH+VT+EEIQ++FV+YM+ND+LG+I+ 
Sbjct: 820  GDLYFVCWDEKLIPPKTDT--PMDYYARRQRHTDHDVTLEEIQKFFVDYMINDTLGVIST 877

Query: 840  AHVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPM 661
            AH+V+ADREP KARS KCL+LA LH+ AVDFAKTG+ AEMP  L P+E+PDFME+  +PM
Sbjct: 878  AHLVYADREPAKARSPKCLQLANLHSMAVDFAKTGSSAEMPRILRPKEFPDFMERWDRPM 937

Query: 660  YESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYD 481
            Y ST ILGKLYR +   +E     LMD+  + +  YD   +  GF+  L+ AE +++ Y 
Sbjct: 938  YVSTGILGKLYRSASSHIERPNTDLMDAEMLPQSAYDYDLQVSGFEAFLEVAEDYRNMYS 997

Query: 480  SKLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFD 301
             +L++LM YYG ++E EI++GN+R  S     +KKK+ + KD+IL+ V++L  E +GWF 
Sbjct: 998  ERLSSLMNYYGAEHEDEILTGNLRSRSMYLQRDKKKYGEMKDRILLGVKSLHKEVQGWFK 1057

Query: 300  ESCKLHHKSFALASAWYHVTYHSSYWSKGNLISFPWIRYDLMLKTKRYNDTKIQK 136
             SC    +S  +ASAWYHVTYH SY+S+   +SFPWI  D +L  K     K Q+
Sbjct: 1058 RSC-AESESLRMASAWYHVTYHPSYYSENRFLSFPWILSDALLSIKASKSHKRQR 1111


>XP_016510714.1 PREDICTED: RNA-dependent RNA polymerase 1-like [Nicotiana tabacum]
          Length = 658

 Score =  419 bits (1077), Expect = e-137
 Identities = 209/413 (50%), Positives = 282/413 (68%), Gaps = 11/413 (2%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEELET--- 1195
            L +L+++ RIF+P G  ++GCLDE+RTL+YG+VF+Q S    +  ++      +  +   
Sbjct: 229  LLDLRTRTRIFIPNGRTMMGCLDESRTLEYGQVFVQFSGAGRRQFFEESHPFNDSGSANC 288

Query: 1194 -HVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDG 1018
              +++G+VVVAKNPCLHPGDIR L+AV+VP L HMVDC VFPQKG RPHPNECSGSDLDG
Sbjct: 289  DFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDG 348

Query: 1017 DLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANA 838
            D+YFV WDP L+PP++   +PMDY   P  +LDH+VTIEE++EYF NY++NDSLGIIANA
Sbjct: 349  DIYFVCWDPDLIPPRQV--QPMDYTPAPTTQLDHDVTIEEVEEYFTNYIINDSLGIIANA 406

Query: 837  HVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMY 658
            HVV ADREP  A S+ C +LA+L + AVDF KTG PAE+P +L P+EYPDFMEK  KP Y
Sbjct: 407  HVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEYPDFMEKPDKPTY 466

Query: 657  ESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDS 478
             S  ++GKL++   ++  +   +   +R V + +YD     +GF+D++ EA  +KS YD+
Sbjct: 467  PSEKVIGKLFQKVKNKTPQASSIATFTRDVARKSYDSDMIVDGFEDYIDEAFYYKSEYDN 526

Query: 477  KLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDE 298
            KL  LM YYG++ EAEI+SG I   S+ T + +K      + I +AV  LR EAR WF  
Sbjct: 527  KLGNLMDYYGIKTEAEILSGGIMKASK-TFDRRKD----AEAIGVAVRCLRKEARAWFKR 581

Query: 297  SCKLHHKSFALASAWYHVTYHSSYW-------SKGNLISFPWIRYDLMLKTKR 160
               +     A ASAWYHVTYH +YW        + + ISFPW  YD +++ K+
Sbjct: 582  RSDI-DDMLAKASAWYHVTYHHTYWGLYNEGLKRDHFISFPWCVYDQLIQIKK 633


>XP_015581229.1 PREDICTED: RNA-dependent RNA polymerase 2 isoform X2 [Ricinus
            communis]
          Length = 930

 Score =  427 bits (1098), Expect = e-137
 Identities = 209/414 (50%), Positives = 287/414 (69%), Gaps = 5/414 (1%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEELE--TH 1192
            L EL+S+CRIFVP+G +LIGCLDETR LDYG+V+++++ TK +      +S   ++  T 
Sbjct: 503  LVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAELQDADQASFHRVDETTA 562

Query: 1191 VIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVH--MVDCAVFPQKGNRPHPNECSGSDLDG 1018
            V+ G V+V KNPCLHPGDIR L+AV    L    +VDC +FPQKG RPHPNECSG DLDG
Sbjct: 563  VVTGKVIVTKNPCLHPGDIRVLEAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDG 622

Query: 1017 DLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANA 838
            D +F+SWD  L+P   E E PMDY GR   ++DH+VT+EEIQ++F++YM+ND+LG I+ A
Sbjct: 623  DQFFISWDKGLIPG--ETESPMDYQGRRPRKMDHDVTLEEIQKFFIDYMINDTLGAISTA 680

Query: 837  HVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMY 658
            H+VHADREP KARS KCL+LA LH+ AVDFAKTGAPAEMP  L P+E+PDFME+  K MY
Sbjct: 681  HLVHADREPDKARSSKCLQLAELHSMAVDFAKTGAPAEMPKALKPKEFPDFMERIDKKMY 740

Query: 657  ESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDS 478
             S  +LGKLYR + D   +     + +  + +  YD   E +GF++ ++ A  HK  Y  
Sbjct: 741  ISGGVLGKLYRGTLDSTRQQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAISHKDMYVE 800

Query: 477  KLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDE 298
            KL+ LM YY  + E EI++GN++  +     + +++ D KD+IL++V++L+ EA+ WF+ 
Sbjct: 801  KLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILISVKSLQKEAKEWFES 860

Query: 297  SCKLHHKSFALASAWYHVTYHSSYWSKG-NLISFPWIRYDLMLKTKRYNDTKIQ 139
             C+   K   LASAWYHVTYH SY+ +G   +SFPWI  D++L  K  N   ++
Sbjct: 861  CCQAKEKQ-RLASAWYHVTYHPSYFQEGITCLSFPWIVADILLNIKSANSKNLK 913


>XP_006469265.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Citrus
            sinensis] XP_015382842.1 PREDICTED: RNA-dependent RNA
            polymerase 1 isoform X2 [Citrus sinensis]
          Length = 1132

 Score =  432 bits (1110), Expect = e-137
 Identities = 219/416 (52%), Positives = 284/416 (68%), Gaps = 14/416 (3%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKT---KIKGNYDGDSSLEELET 1195
            L EL++K RIF+P G  ++GCLDETRTL+YG+VF+Q+S     ++ G     SS    + 
Sbjct: 703  LLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQR 762

Query: 1194 HVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDGD 1015
             +++G VVVAKNPCLHPGD+R LKAVNVP L HMVDC VFPQKG RPHPNECSGSDLDGD
Sbjct: 763  FIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGD 822

Query: 1014 LYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANAH 835
            +YFV WD  L+PP+++P  PMDY    +++LDH+V IE+++EYF NY++NDSLGIIANAH
Sbjct: 823  IYFVCWDDELIPPQQDP--PMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAH 880

Query: 834  VVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMYE 655
             V ADREP KARSE CL+LA   + AVDF KTG PAE+P  L  +EYPDFMEK  KP YE
Sbjct: 881  TVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYE 940

Query: 654  STSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDSK 475
            S +++GKL+R   D       + + ++ V + +YD   E +GF+DH+ +A  HK  YD K
Sbjct: 941  SQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYK 1000

Query: 474  LAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKD--KILMAVEALRTEARGWFD 301
            L  LM YYG++ EAEI++G+I   S       K  + R+D   I MAV ALR EAR WF 
Sbjct: 1001 LGNLMDYYGIKTEAEILTGSIMKMS-------KSFTKRRDAEAIGMAVRALRKEARAWFK 1053

Query: 300  E--SCKLHHKSFALASAWYHVTYHSSYW-------SKGNLISFPWIRYDLMLKTKR 160
            E         ++A ASAWYHVTYH  YW       ++ + +SFPW  YD +++ K+
Sbjct: 1054 EKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCVYDRLVEIKK 1109


>XP_015382841.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X1 [Citrus
            sinensis]
          Length = 1138

 Score =  432 bits (1110), Expect = e-137
 Identities = 219/416 (52%), Positives = 284/416 (68%), Gaps = 14/416 (3%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKT---KIKGNYDGDSSLEELET 1195
            L EL++K RIF+P G  ++GCLDETRTL+YG+VF+Q+S     ++ G     SS    + 
Sbjct: 709  LLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLHGESSLFSSSRSRQR 768

Query: 1194 HVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDGD 1015
             +++G VVVAKNPCLHPGD+R LKAVNVP L HMVDC VFPQKG RPHPNECSGSDLDGD
Sbjct: 769  FIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMRPHPNECSGSDLDGD 828

Query: 1014 LYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANAH 835
            +YFV WD  L+PP+++P  PMDY    +++LDH+V IE+++EYF NY++NDSLGIIANAH
Sbjct: 829  IYFVCWDDELIPPQQDP--PMDYTPAQSMQLDHDVQIEDVEEYFTNYIVNDSLGIIANAH 886

Query: 834  VVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMYE 655
             V ADREP KARSE CL+LA   + AVDF KTG PAE+P  L  +EYPDFMEK  KP YE
Sbjct: 887  TVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVPAEIPPHLYVKEYPDFMEKPDKPTYE 946

Query: 654  STSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDSK 475
            S +++GKL+R   D       + + ++ V + +YD   E +GF+DH+ +A  HK  YD K
Sbjct: 947  SQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYK 1006

Query: 474  LAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKD--KILMAVEALRTEARGWFD 301
            L  LM YYG++ EAEI++G+I   S       K  + R+D   I MAV ALR EAR WF 
Sbjct: 1007 LGNLMDYYGIKTEAEILTGSIMKMS-------KSFTKRRDAEAIGMAVRALRKEARAWFK 1059

Query: 300  E--SCKLHHKSFALASAWYHVTYHSSYW-------SKGNLISFPWIRYDLMLKTKR 160
            E         ++A ASAWYHVTYH  YW       ++ + +SFPW  YD +++ K+
Sbjct: 1060 EKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCVYDRLVEIKK 1115


>XP_002311536.1 RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            EEE88903.1 RNA-directed RNA Polymerase family protein
            [Populus trichocarpa]
          Length = 1133

 Score =  431 bits (1108), Expect = e-137
 Identities = 218/437 (49%), Positives = 295/437 (67%), Gaps = 14/437 (3%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEEL---ET 1195
            L EL++K RIF+P G  ++GCLDETRTL++G+VF++ S ++ +  YD      E    + 
Sbjct: 699  LLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFSGSRFRNLYDSSDMFSERGRGQC 758

Query: 1194 HVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDGD 1015
            ++I+G VVVAKNPCLHPGD+R LKAV+VP L HMVDC VFPQKG RPHPNECSGSDLDGD
Sbjct: 759  YLIKGSVVVAKNPCLHPGDLRILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGD 818

Query: 1014 LYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANAH 835
            +YFV WDP L+P ++    PMDY   P ++LDH+VTIEE++EYF NY++NDSLG+IANAH
Sbjct: 819  IYFVCWDPELIPSQQI--SPMDYTPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAH 876

Query: 834  VVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMYE 655
              HAD+E LKA SE C+ELAR  + AVDF KTG PAE+P  L  REYPDFMEK  KP YE
Sbjct: 877  TAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYE 936

Query: 654  STSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDSK 475
            S +++GKL+R+  D       +   +  V +  YD   E +GF+D++ +A  +KS YD K
Sbjct: 937  SRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYK 996

Query: 474  LAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDE- 298
            L  LM+YYG++ EAE++SG+    S+    ++       + I MAV +L+ EAR WF+E 
Sbjct: 997  LGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRD-----AEAIGMAVRSLKKEARSWFNEK 1051

Query: 297  SCKLHHKS---FALASAWYHVTYHSSYW-------SKGNLISFPWIRYDLMLKTKRYNDT 148
               L  ++    A ASAWYHVTYH +YW       ++ + +SFPW  YD +++ KR N  
Sbjct: 1052 GSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSA 1111

Query: 147  KIQK*KELVSFQKSKKR 97
            +I++   L S ++   R
Sbjct: 1112 RIRRSLILPSVERQFSR 1128


>XP_002511431.1 PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Ricinus
            communis] EEF52033.1 RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 983

 Score =  427 bits (1098), Expect = e-137
 Identities = 209/414 (50%), Positives = 287/414 (69%), Gaps = 5/414 (1%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEELE--TH 1192
            L EL+S+CRIFVP+G +LIGCLDETR LDYG+V+++++ TK +      +S   ++  T 
Sbjct: 556  LVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAELQDADQASFHRVDETTA 615

Query: 1191 VIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVH--MVDCAVFPQKGNRPHPNECSGSDLDG 1018
            V+ G V+V KNPCLHPGDIR L+AV    L    +VDC +FPQKG RPHPNECSG DLDG
Sbjct: 616  VVTGKVIVTKNPCLHPGDIRVLEAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDG 675

Query: 1017 DLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANA 838
            D +F+SWD  L+P   E E PMDY GR   ++DH+VT+EEIQ++F++YM+ND+LG I+ A
Sbjct: 676  DQFFISWDKGLIPG--ETESPMDYQGRRPRKMDHDVTLEEIQKFFIDYMINDTLGAISTA 733

Query: 837  HVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMY 658
            H+VHADREP KARS KCL+LA LH+ AVDFAKTGAPAEMP  L P+E+PDFME+  K MY
Sbjct: 734  HLVHADREPDKARSSKCLQLAELHSMAVDFAKTGAPAEMPKALKPKEFPDFMERIDKKMY 793

Query: 657  ESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDS 478
             S  +LGKLYR + D   +     + +  + +  YD   E +GF++ ++ A  HK  Y  
Sbjct: 794  ISGGVLGKLYRGTLDSTRQQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAISHKDMYVE 853

Query: 477  KLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDE 298
            KL+ LM YY  + E EI++GN++  +     + +++ D KD+IL++V++L+ EA+ WF+ 
Sbjct: 854  KLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILISVKSLQKEAKEWFES 913

Query: 297  SCKLHHKSFALASAWYHVTYHSSYWSKG-NLISFPWIRYDLMLKTKRYNDTKIQ 139
             C+   K   LASAWYHVTYH SY+ +G   +SFPWI  D++L  K  N   ++
Sbjct: 914  CCQAKEKQ-RLASAWYHVTYHPSYFQEGITCLSFPWIVADILLNIKSANSKNLK 966


>KNA07851.1 hypothetical protein SOVF_168010 isoform B, partial [Spinacia
            oleracea]
          Length = 1112

 Score =  430 bits (1106), Expect = e-137
 Identities = 225/429 (52%), Positives = 283/429 (65%), Gaps = 21/429 (4%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIK--GN-------YDGDSS 1213
            L EL++K RIFVPRG  ++GCLDET+TL+YG+VF+QVS  + +  GN       YD    
Sbjct: 681  LQELRTKSRIFVPRGRAMMGCLDETQTLEYGQVFVQVSGARFRDVGNELLTCTGYDS--- 737

Query: 1212 LEELETHVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSG 1033
              E   +V++G VVVAKNPCLHPGD+R L AV+VP L HMVDC VFPQKG RPHPNECSG
Sbjct: 738  --EPYNYVVKGKVVVAKNPCLHPGDVRVLMAVDVPALSHMVDCVVFPQKGKRPHPNECSG 795

Query: 1032 SDLDGDLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLG 853
            SDLDGD+YFV WD  L+PP ++  EPMDY    + +LDH+VT+EE+ +YF +Y++NDSLG
Sbjct: 796  SDLDGDIYFVCWDTELIPPHQQ--EPMDYTAAESTKLDHDVTMEEVMDYFTDYIINDSLG 853

Query: 852  IIANAHVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKE 673
            IIANAH   ADRE LKA S  C++LA L + AVDF KTG PA  P  L  +EYPDFM+K 
Sbjct: 854  IIANAHTAFADREHLKAMSSPCIQLAELFSIAVDFPKTGIPAVTPAALRVKEYPDFMDKP 913

Query: 672  GKPMYESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHK 493
             KP YES +++GKL+R+  +R      +   +R +   +YD   EY+GF+DHL +AE +K
Sbjct: 914  DKPTYESHNVIGKLFREVKERSPSSASIRSFTREIAGCSYDPDMEYDGFEDHLDDAEYYK 973

Query: 492  SWYDSKLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKD--KILMAVEALRTE 319
            S YD KL  LM YYG+  EAEI+SGNI   S       K    RKD   I MAV +LR E
Sbjct: 974  SQYDYKLGNLMDYYGITTEAEILSGNIMRMS-------KSFDRRKDAEAITMAVRSLRKE 1026

Query: 318  ARGWFDESCKLHHKSFALASAWYHVTYHSSYWSKGN-------LISFPWIRYDLML---K 169
            AR WF+         +A ASAWY VTYH SY+ K N        +SFPW  YD ++   K
Sbjct: 1027 ARAWFNTDPDSGGDMYAKASAWYFVTYHPSYFGKYNEGLKRDHFLSFPWCVYDRLITIKK 1086

Query: 168  TKRYNDTKI 142
            TKR + T +
Sbjct: 1087 TKRRSSTNV 1095


>CDP05596.1 unnamed protein product [Coffea canephora]
          Length = 1112

 Score =  430 bits (1106), Expect = e-137
 Identities = 220/417 (52%), Positives = 285/417 (68%), Gaps = 7/417 (1%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEELETHVI 1186
            L +L++K RIF+P G  +IGCLDETRTL+YG+VF+Q S    +  YD   S  E +T ++
Sbjct: 689  LLDLRTKTRIFIPDGRSMIGCLDETRTLEYGQVFVQFSSAGCRQFYDDSISYYEHKT-IL 747

Query: 1185 EGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDGDLYF 1006
            +G VVVAKNPCLHPGDIR LKAV++P L HMVDC VFPQKG RPH NECSGSDLDGD+YF
Sbjct: 748  KGTVVVAKNPCLHPGDIRILKAVDLPTLHHMVDCVVFPQKGKRPHTNECSGSDLDGDIYF 807

Query: 1005 VSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANAHVVH 826
            V WDP L+PP+++  EPMDY   P ++L+H VTIEE++EYF NY++NDSLGIIANAH V 
Sbjct: 808  VCWDPDLIPPRQD--EPMDYTPAPTMQLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVF 865

Query: 825  ADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMYESTS 646
            ADRE LKARS+ CLELARL + AVDF KTG PAE+   L  +EYPDFMEK  K  Y+S  
Sbjct: 866  ADRELLKARSKPCLELARLFSIAVDFPKTGVPAEITSHLRVKEYPDFMEKSDKTTYDSQH 925

Query: 645  ILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDSKLAA 466
            ++GKL+R+  +       +   +R V + +YD   E +GF+D++ EA  +KS YD KL  
Sbjct: 926  VIGKLFREVKEIAPHTSSIRSFTREVARKSYDIDMEVDGFEDYVDEAFDYKSEYDYKLGN 985

Query: 465  LMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDESCKL 286
            LM YYG++ EAEI+SG I   SR     K       + + MAV +LR EAR WF+ +   
Sbjct: 986  LMDYYGIKTEAEILSGGIMKMSRSFDRRKD-----AEAVGMAVRSLRKEARTWFNRNGGH 1040

Query: 285  HHKSFALASAWYHVTYHSSYW-------SKGNLISFPWIRYDLMLKTKRYNDTKIQK 136
               +FA ASAWY+VTYH  YW       ++ + ISFPW  YD +++ K+    + Q+
Sbjct: 1041 SDDAFAKASAWYYVTYHPRYWGCYNEGLNRAHYISFPWCIYDRLIQIKKARTRRAQQ 1097


>KNA07850.1 hypothetical protein SOVF_168010 isoform A, partial [Spinacia
            oleracea]
          Length = 1124

 Score =  430 bits (1106), Expect = e-137
 Identities = 225/429 (52%), Positives = 283/429 (65%), Gaps = 21/429 (4%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIK--GN-------YDGDSS 1213
            L EL++K RIFVPRG  ++GCLDET+TL+YG+VF+QVS  + +  GN       YD    
Sbjct: 693  LQELRTKSRIFVPRGRAMMGCLDETQTLEYGQVFVQVSGARFRDVGNELLTCTGYDS--- 749

Query: 1212 LEELETHVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSG 1033
              E   +V++G VVVAKNPCLHPGD+R L AV+VP L HMVDC VFPQKG RPHPNECSG
Sbjct: 750  --EPYNYVVKGKVVVAKNPCLHPGDVRVLMAVDVPALSHMVDCVVFPQKGKRPHPNECSG 807

Query: 1032 SDLDGDLYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLG 853
            SDLDGD+YFV WD  L+PP ++  EPMDY    + +LDH+VT+EE+ +YF +Y++NDSLG
Sbjct: 808  SDLDGDIYFVCWDTELIPPHQQ--EPMDYTAAESTKLDHDVTMEEVMDYFTDYIINDSLG 865

Query: 852  IIANAHVVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKE 673
            IIANAH   ADRE LKA S  C++LA L + AVDF KTG PA  P  L  +EYPDFM+K 
Sbjct: 866  IIANAHTAFADREHLKAMSSPCIQLAELFSIAVDFPKTGIPAVTPAALRVKEYPDFMDKP 925

Query: 672  GKPMYESTSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHK 493
             KP YES +++GKL+R+  +R      +   +R +   +YD   EY+GF+DHL +AE +K
Sbjct: 926  DKPTYESHNVIGKLFREVKERSPSSASIRSFTREIAGCSYDPDMEYDGFEDHLDDAEYYK 985

Query: 492  SWYDSKLAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKD--KILMAVEALRTE 319
            S YD KL  LM YYG+  EAEI+SGNI   S       K    RKD   I MAV +LR E
Sbjct: 986  SQYDYKLGNLMDYYGITTEAEILSGNIMRMS-------KSFDRRKDAEAITMAVRSLRKE 1038

Query: 318  ARGWFDESCKLHHKSFALASAWYHVTYHSSYWSKGN-------LISFPWIRYDLML---K 169
            AR WF+         +A ASAWY VTYH SY+ K N        +SFPW  YD ++   K
Sbjct: 1039 ARAWFNTDPDSGGDMYAKASAWYFVTYHPSYFGKYNEGLKRDHFLSFPWCVYDRLITIKK 1098

Query: 168  TKRYNDTKI 142
            TKR + T +
Sbjct: 1099 TKRRSSTNV 1107


>XP_013466607.1 RNA-dependent RNA polymerase family protein [Medicago truncatula]
            KEH40648.1 RNA-dependent RNA polymerase family protein
            [Medicago truncatula]
          Length = 554

 Score =  413 bits (1062), Expect = e-137
 Identities = 209/413 (50%), Positives = 276/413 (66%), Gaps = 11/413 (2%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEELETHVI 1186
            L EL+ + RIF+P+G  ++G LDETRTL+YGEVF+Q S  +               +HV+
Sbjct: 138  LLELRQRTRIFIPKGRAMMGVLDETRTLEYGEVFVQYSHKR-----------HSCLSHVV 186

Query: 1185 EGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDGDLYF 1006
            +G+VVVAKNPCLHPGD+R LKAV+VP L HMVDC VFPQKG+RPHPNECSGSDLDGD+YF
Sbjct: 187  KGEVVVAKNPCLHPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYF 246

Query: 1005 VSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANAHVVH 826
            V WDP L+PP+    EPM+Y    +  L+H+V IEE++EYF NYMLNDSLGII+NAH V 
Sbjct: 247  VCWDPELIPPRTI--EPMEYNSAQSTLLNHDVEIEEVEEYFTNYMLNDSLGIISNAHTVF 304

Query: 825  ADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMYESTS 646
            AD+EP KA SE C+ELA+L + AVDF KTG PA +P  L  +EYPDFMEK  K  Y+S +
Sbjct: 305  ADKEPAKAMSEPCIELAKLFSIAVDFPKTGIPAVIPPHLFAKEYPDFMEKPDKTTYKSKN 364

Query: 645  ILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDSKLAA 466
            ++GKL+R+      E   +   +  V K +YD   E+EGF D++ +A  HK+ YD KL  
Sbjct: 365  VIGKLFREIQGISTEGGSLTSFTLEVAKESYDSDMEFEGFMDYVDDAFYHKTNYDYKLGN 424

Query: 465  LMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDESC-- 292
            LM YYG++ E+EI+SGNI   S+     +       D I MAV +LR EAR WF++    
Sbjct: 425  LMDYYGIKTESEILSGNIMKMSKSFTKRRD-----ADAITMAVRSLRKEARSWFNDGAAD 479

Query: 291  --KLHHKSFALASAWYHVTYHSSYW-------SKGNLISFPWIRYDLMLKTKR 160
                   ++A ASAWY+V+YH SY+        + + +SFPW  Y L+++ K+
Sbjct: 480  VDAGSDDAYAKASAWYYVSYHHSYYGLYNEGMKRDHFLSFPWCVYHLLVQIKK 532


>XP_011024314.1 PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
            euphratica]
          Length = 1132

 Score =  430 bits (1105), Expect = e-137
 Identities = 220/437 (50%), Positives = 296/437 (67%), Gaps = 14/437 (3%)
 Frame = -3

Query: 1365 LSELKSKCRIFVPRGNVLIGCLDETRTLDYGEVFIQVSKTKIKGNYDGDSSLEEL---ET 1195
            L EL++K RIF+P G +++GCLDETRTL++G+VF+Q S ++ +  YD      E    + 
Sbjct: 699  LLELRTKTRIFIPNGRLMMGCLDETRTLEHGQVFVQFSGSRFRNLYDSSDVFSERGRGQC 758

Query: 1194 HVIEGDVVVAKNPCLHPGDIRKLKAVNVPGLVHMVDCAVFPQKGNRPHPNECSGSDLDGD 1015
            ++IEG VVVAKNPCLHPGD+R LKAV+VP L HMVDC VFPQKG RPHPN+CSGSDLDGD
Sbjct: 759  YLIEGSVVVAKNPCLHPGDVRILKAVDVPALHHMVDCVVFPQKGPRPHPNQCSGSDLDGD 818

Query: 1014 LYFVSWDPMLVPPKEEPEEPMDYMGRPAIRLDHNVTIEEIQEYFVNYMLNDSLGIIANAH 835
            +YFV WDP L+P ++    PMDY   P ++LDH+VTIEE++EYF NY++NDSLGIIANAH
Sbjct: 819  IYFVCWDPELIPSQQI--SPMDYTPEPTLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAH 876

Query: 834  VVHADREPLKARSEKCLELARLHAKAVDFAKTGAPAEMPLRLIPREYPDFMEKEGKPMYE 655
               AD+E LKA SE CLELAR  + AVDF KTG PAE+P  L  REYPDFMEK  KP YE
Sbjct: 877  TAFADKESLKAMSEPCLELARKFSIAVDFPKTGVPAEIPSNLRVREYPDFMEKPDKPSYE 936

Query: 654  STSILGKLYRDSYDRMEEDPQVLMDSRGVCKINYDKSFEYEGFQDHLKEAELHKSWYDSK 475
            S +++GKL+R+  D       +   +  V +  YD   E +GF+D++ +A  +KS YD K
Sbjct: 937  SRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYK 996

Query: 474  LAALMKYYGVQNEAEIISGNIRMPSRGTINEKKKHSDRKDKILMAVEALRTEARGWFDE- 298
            L  LM+YYG++ EAE++SG+    S+    ++       + I MAV +LR EAR WF+E 
Sbjct: 997  LGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRD-----AEAIGMAVRSLRKEARSWFNEK 1051

Query: 297  SCKLHHKS---FALASAWYHVTYHSSYW-------SKGNLISFPWIRYDLMLKTKRYNDT 148
               L  ++    A ASAWYHVTYH +YW       ++ + +SFPW  YD +++ K+ N  
Sbjct: 1052 GSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCLYDKLIQIKK-NSA 1110

Query: 147  KIQK*KELVSFQKSKKR 97
            +I++ + L S ++   R
Sbjct: 1111 RIRRSRILHSVERQFSR 1127