BLASTX nr result
ID: Ephedra29_contig00009173
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00009173
(351 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABR16859.1 unknown [Picea sitchensis] 67 8e-11
NP_001319913.1 transcription initiation factor IIF subunit alpha... 62 6e-09
AAR28013.1 mutant TFIIF-alpha, partial [Arabidopsis thaliana] 62 6e-09
NP_001319914.1 transcription initiation factor IIF subunit alpha... 62 6e-09
KZV16118.1 transcription initiation factor IIF subunit alpha [Do... 60 3e-08
XP_006396740.1 hypothetical protein EUTSA_v10028564mg [Eutrema s... 60 3e-08
XP_018455547.1 PREDICTED: transcription initiation factor IIF su... 60 5e-08
XP_018453803.1 PREDICTED: transcription initiation factor IIF su... 60 5e-08
XP_002872663.1 mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyr... 59 7e-08
KNA09631.1 hypothetical protein SOVF_151770 [Spinacia oleracea] 59 1e-07
ONK70150.1 uncharacterized protein A4U43_C05F30770 [Asparagus of... 58 2e-07
XP_019174246.1 PREDICTED: uncharacterized protein LOC109169788 i... 58 2e-07
XP_019174232.1 PREDICTED: uncharacterized protein LOC109169788 i... 58 2e-07
XP_010422237.1 PREDICTED: transcription initiation factor IIF su... 58 2e-07
XP_019084093.1 PREDICTED: transcription initiation factor IIF su... 58 2e-07
XP_013732691.1 PREDICTED: transcription initiation factor IIF su... 57 3e-07
XP_013676955.1 PREDICTED: transcription initiation factor IIF su... 57 3e-07
XP_013659195.1 PREDICTED: transcription initiation factor IIF su... 57 3e-07
XP_009114609.1 PREDICTED: transcription initiation factor IIF su... 57 3e-07
XP_013609275.1 PREDICTED: transcription initiation factor IIF su... 57 3e-07
>ABR16859.1 unknown [Picea sitchensis]
Length = 366
Score = 67.4 bits (163), Expect = 8e-11
Identities = 34/102 (33%), Positives = 56/102 (54%)
Frame = -1
Query: 315 KDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTS 136
++A+C C +KKDLYAS C H+DP+C+ CA A + + C C + +T+V RR+ +K
Sbjct: 6 ENAKCMKCEAKKDLYASQCKHLDPICITCATVMAKDKTPCPTCLQLVTKVFRRYDLKSYL 65
Query: 135 QKGWSGFVGILPPEQQEDASEDPDMSDVNQQKLSFFPETDNQ 10
+ F+ P+ S D+ V++Q + TDN+
Sbjct: 66 PGNATKFLAKFSPK----PSGSVDIVGVDKQPAAGKNTTDNK 103
>NP_001319913.1 transcription initiation factor IIF subunit alpha RAP74
[Arabidopsis thaliana] OAP00193.1 hypothetical protein
AXX17_AT4G14230 [Arabidopsis thaliana] AEE83155.2
transcription initiation factor IIF subunit alpha RAP74
[Arabidopsis thaliana]
Length = 543
Score = 62.4 bits (150), Expect = 6e-09
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ + C C S+ DLY S C HM LCLKC R A S C EC +T++IR + V+
Sbjct: 4 CLQLNTSCVGCGSQSDLYGSSCRHMT-LCLKCGRTMAQNKSKCHECGTVVTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AAAPTDKNYFIG 74
>AAR28013.1 mutant TFIIF-alpha, partial [Arabidopsis thaliana]
Length = 640
Score = 62.4 bits (150), Expect = 6e-09
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ + C C S+ DLY S C HM LCLKC R A S C EC +T++IR + V+
Sbjct: 4 CLQLNTSCVGCGSQSDLYGSSCRHMT-LCLKCGRTMAQNKSKCHECGTVVTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AAAPTDKNYFIG 74
>NP_001319914.1 transcription initiation factor IIF subunit alpha RAP74
[Arabidopsis thaliana] Q9SU25.1 RecName:
Full=Transcription initiation factor IIF subunit alpha;
Short=TFIIF-alpha; AltName: Full=General transcription
factor IIF subunit 1; AltName: Full=Transcription
initiation factor RAP74 homolog; Short=AtRAP74
CAB53754.1 putative protein [Arabidopsis thaliana]
CAB78304.1 putative protein [Arabidopsis thaliana]
AEE83156.2 transcription initiation factor IIF subunit
alpha RAP74 [Arabidopsis thaliana]
Length = 649
Score = 62.4 bits (150), Expect = 6e-09
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ + C C S+ DLY S C HM LCLKC R A S C EC +T++IR + V+
Sbjct: 4 CLQLNTSCVGCGSQSDLYGSSCRHMT-LCLKCGRTMAQNKSKCHECGTVVTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AAAPTDKNYFIG 74
>KZV16118.1 transcription initiation factor IIF subunit alpha [Dorcoceras
hygrometricum]
Length = 537
Score = 60.5 bits (145), Expect = 3e-08
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = -1
Query: 303 CQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 124
C C S DLY S C H+ LCL C + A+ + C EC PIT++IR + V+ +S
Sbjct: 11 CGGCGSTVDLYGSTCKHLT-LCLTCGKTMAENRAKCYECGTPITRLIREYNVRASSSSNK 69
Query: 123 SGFVGILP 100
+ F+G P
Sbjct: 70 NHFIGRFP 77
>XP_006396740.1 hypothetical protein EUTSA_v10028564mg [Eutrema salsugineum]
ESQ38193.1 hypothetical protein EUTSA_v10028564mg
[Eutrema salsugineum]
Length = 542
Score = 60.5 bits (145), Expect = 3e-08
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = -1
Query: 333 SLKCMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRF 154
S C+ +EC C S DLY S C HM LC KC + A+ S C +C +T++IR +
Sbjct: 2 SSHCLTLKSECMRCKSPSDLYGSSCRHMT-LCFKCGKTMAENKSKCIDCGTIVTRLIREY 60
Query: 153 RVKRTSQKGWSGFVG 109
V+ + + F+G
Sbjct: 61 NVRAAAPTDKNYFIG 75
>XP_018455547.1 PREDICTED: transcription initiation factor IIF subunit alpha-like
[Raphanus sativus]
Length = 519
Score = 59.7 bits (143), Expect = 5e-08
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ C C SK DLY S C HM LCLKC + A+ + C +C +T++IR + V+
Sbjct: 4 CLTLKPACMGCGSKSDLYGSSCRHMT-LCLKCGKTMAENKAKCLDCGTVLTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AATPTDKNYFIG 74
>XP_018453803.1 PREDICTED: transcription initiation factor IIF subunit alpha-like
[Raphanus sativus]
Length = 523
Score = 59.7 bits (143), Expect = 5e-08
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ C C SK DLY S C HM LCLKC + A+ + C +C +T++IR + V+
Sbjct: 4 CLTLKPACMGCGSKSDLYGSSCRHMT-LCLKCGKTMAENKAKCLDCGTVLTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AATPTDKNYFIG 74
>XP_002872663.1 mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyrata] EFH48922.1
mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 59.3 bits (142), Expect = 7e-08
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ C C S+ DLY S C HM LCLKC R A+ + C +C +T++IR + V+
Sbjct: 4 CLQLKPACMGCGSQSDLYGSSCRHMT-LCLKCGRTMAENKAKCLDCGTVLTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AAAPTDKNYFIG 74
>KNA09631.1 hypothetical protein SOVF_151770 [Spinacia oleracea]
Length = 541
Score = 58.5 bits (140), Expect = 1e-07
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = -1
Query: 303 CQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 124
C C S DLY S C H+ LCL C + A+ + C EC P+T++IR + V+ +S
Sbjct: 11 CGRCGSNNDLYGSNCKHLT-LCLSCGKNMAENRAKCFECGTPVTRLIREYNVRTSSSIDK 69
Query: 123 SGFVGILP 100
+ F+G P
Sbjct: 70 NYFIGRFP 77
>ONK70150.1 uncharacterized protein A4U43_C05F30770 [Asparagus officinalis]
Length = 533
Score = 57.8 bits (138), Expect = 2e-07
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Frame = -1
Query: 339 MSSLKCMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIR 160
MSS + K A C+ C S DLY S C H LC C ++ A+ + C+ C PIT++IR
Sbjct: 3 MSSFDLILKPA-CEGCGSPSDLYGSNCKHKT-LCASCGKRMAESRARCNICGIPITKLIR 60
Query: 159 RFRVKRTSQKGWSGFVGI----LPPEQQEDASED 70
+ V+ ++ S F+G LPP ++ +E+
Sbjct: 61 EYNVRASASTDKSYFIGRFVTGLPPFSKKKYAEN 94
>XP_019174246.1 PREDICTED: uncharacterized protein LOC109169788 isoform X3 [Ipomoea
nil]
Length = 535
Score = 57.8 bits (138), Expect = 2e-07
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = -1
Query: 303 CQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 124
C C S +LY S C H+ LC+ C + A+ C++C PIT++IR + V+ S
Sbjct: 11 CSGCGSSSELYGSACKHLT-LCVSCGKTMAENHGTCNKCGAPITRLIREYNVRACSTNDK 69
Query: 123 SGFVGILP 100
+ F+G P
Sbjct: 70 NYFIGRFP 77
>XP_019174232.1 PREDICTED: uncharacterized protein LOC109169788 isoform X2 [Ipomoea
nil] XP_019174239.1 PREDICTED: uncharacterized protein
LOC109169788 isoform X2 [Ipomoea nil]
Length = 538
Score = 57.8 bits (138), Expect = 2e-07
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = -1
Query: 303 CQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVKRTSQKGW 124
C C S +LY S C H+ LC+ C + A+ C++C PIT++IR + V+ S
Sbjct: 11 CSGCGSSSELYGSACKHLT-LCVSCGKTMAENHGTCNKCGAPITRLIREYNVRACSTNDK 69
Query: 123 SGFVGILP 100
+ F+G P
Sbjct: 70 NYFIGRFP 77
>XP_010422237.1 PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X2 [Camelina sativa]
Length = 540
Score = 57.8 bits (138), Expect = 2e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ C C S+ DLY S C HM LCLKC + A+ + C +C +T++IR + V+
Sbjct: 4 CLQLKPACIGCQSQSDLYGSSCRHMT-LCLKCGKTMAENKAKCLDCGTVLTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AAAPTDKNYFIG 74
>XP_019084093.1 PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Camelina sativa]
Length = 541
Score = 57.8 bits (138), Expect = 2e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ C C S+ DLY S C HM LCLKC + A+ + C +C +T++IR + V+
Sbjct: 4 CLQLKPACIGCQSQSDLYGSSCRHMT-LCLKCGKTMAENKAKCLDCGTVLTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AAAPTDKNYFIG 74
>XP_013732691.1 PREDICTED: transcription initiation factor IIF subunit alpha-like
[Brassica napus]
Length = 336
Score = 57.4 bits (137), Expect = 3e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ C C S+ DLY S C HM LCLKC + A+ + C +C +T++IR + V+
Sbjct: 4 CLVLKPSCMGCGSQSDLYGSSCRHMT-LCLKCGKTMAENKAKCLDCGTVLTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AATPTDKNYFIG 74
>XP_013676955.1 PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Brassica napus] XP_013676956.1 PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Brassica napus]
Length = 504
Score = 57.4 bits (137), Expect = 3e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ C C S+ DLY S C HM LCLKC + A+ + C +C +T++IR + V+
Sbjct: 4 CLILKPACMGCGSRSDLYGSSCRHMT-LCLKCGKTMAENKAKCLDCGTVLTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AATPTDKNYFIG 74
>XP_013659195.1 PREDICTED: transcription initiation factor IIF subunit alpha-like
[Brassica napus]
Length = 507
Score = 57.4 bits (137), Expect = 3e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ C C S+ DLY S C HM LCLKC + A+ + C +C +T++IR + V+
Sbjct: 4 CLVLKPACMGCGSRSDLYGSSCRHMT-LCLKCGKTMAENKAKCLDCGTVLTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AATPTDKNYFIG 74
>XP_009114609.1 PREDICTED: transcription initiation factor IIF subunit alpha
[Brassica rapa]
Length = 507
Score = 57.4 bits (137), Expect = 3e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ C C S+ DLY S C HM LCLKC + A+ + C +C +T++IR + V+
Sbjct: 4 CLVLKPACMGCGSRSDLYGSSCRHMT-LCLKCGKTMAENKAKCLDCGTVLTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AATPTDKNYFIG 74
>XP_013609275.1 PREDICTED: transcription initiation factor IIF subunit alpha
[Brassica oleracea var. oleracea]
Length = 510
Score = 57.4 bits (137), Expect = 3e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -1
Query: 324 CMNKDAECQDCHSKKDLYASVCTHMDPLCLKCARKYADESSACSECNEPITQVIRRFRVK 145
C+ C C S+ DLY S C HM LCLKC + A+ + C +C +T++IR + V+
Sbjct: 4 CLILKPACMGCGSRSDLYGSSCRHMT-LCLKCGKTMAENKAKCLDCGTVLTRLIREYNVR 62
Query: 144 RTSQKGWSGFVG 109
+ + F+G
Sbjct: 63 AATPTDKNYFIG 74