BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00008750
         (837 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016500687.1 PREDICTED: DNA repair helicase XPB1-like [Nicotia...   211   5e-63
XP_006439501.1 hypothetical protein CICLE_v100190882mg, partial ...   205   8e-62
XP_018623264.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana to...   211   3e-61
EDZ71579.1 YIL143Cp-like protein [Saccharomyces cerevisiae AWRI1...   202   1e-60
KDO76291.1 hypothetical protein CISIN_1g010184mg [Citrus sinensis]    207   6e-60
KDO76293.1 hypothetical protein CISIN_1g010184mg [Citrus sinensis]    207   6e-60
XP_004298821.1 PREDICTED: DNA repair helicase XPB1-like [Fragari...   211   1e-59
XP_019267166.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana at...   211   1e-59
OEL33778.1 DNA repair helicase XPB2, partial [Dichanthelium olig...   205   1e-59
OAY56500.1 hypothetical protein MANES_02G021700 [Manihot esculenta]   211   1e-59
KJB20625.1 hypothetical protein B456_003G156900 [Gossypium raimo...   206   2e-59
XP_018633737.1 PREDICTED: DNA repair helicase XPB1-like [Nicotia...   211   2e-59
XP_016498300.1 PREDICTED: DNA repair helicase XPB1-like [Nicotia...   211   2e-59
XP_016476264.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana ta...   211   2e-59
XP_009790427.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana sy...   211   2e-59
XP_015896113.1 PREDICTED: DNA repair helicase XPB1 [Ziziphus juj...   211   2e-59
4ERN_A Chain A, Crystal Structure Of The C-terminal Domain Of Hu...   199   3e-59
BAS73810.1 Os01g0691600, partial [Oryza sativa Japonica Group]        205   4e-59
JAT61922.1 DNA repair helicase XPB1 [Anthurium amnicola]              210   4e-59
AAH24446.1 Ercc3 protein, partial [Mus musculus]                      197   5e-59

>XP_016500687.1 PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
           XP_016500745.1 PREDICTED: DNA repair helicase XPB1-like
           [Nicotiana tabacum]
          Length = 351

 Score =  211 bits (536), Expect = 5e-63
 Identities = 114/204 (55%), Positives = 145/204 (71%), Gaps = 5/204 (2%)
 Frame = -2

Query: 827 REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
           ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 75  KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 134

Query: 650 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
           G TSH ER  +L+ F+T  +  TVFLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 135 GATSHVERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 194

Query: 470 RILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 303
           RILR K R+ Q  ++GG     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 195 RILRAKGRH-QDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 253

Query: 302 PPEGRGDLIFARPEVQAQLLKEAL 231
           PP+   +L + R + Q QLL + L
Sbjct: 254 PPDSGPELSYHRLDDQLQLLGKVL 277


>XP_006439501.1 hypothetical protein CICLE_v100190882mg, partial [Citrus
           clementina] ESR52741.1 hypothetical protein
           CICLE_v100190882mg, partial [Citrus clementina]
          Length = 269

 Score =  205 bits (521), Expect = 8e-62
 Identities = 110/193 (56%), Positives = 135/193 (69%), Gaps = 4/193 (2%)
 Frame = -2

Query: 797 LYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIKGETSHEERLL 621
           LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI G TSH ER  
Sbjct: 2   LYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTK 61

Query: 620 VLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLGRILRPKIRNE 441
           +L+ F+      T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLGRILR K + E
Sbjct: 62  ILQAFKCSRDLNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLE 121

Query: 440 QGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFA 270
             M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PPP+   DL + 
Sbjct: 122 DRMAGGKEEYNAFFYSLVSTDTQEMFYSTKRQQFLIDQGYSFKVITSLPPPDSGADLSYH 181

Query: 269 RPEVQAQLLKEAL 231
           R + Q  LL + L
Sbjct: 182 RLDEQLALLGKVL 194


>XP_018623264.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana tomentosiformis]
           XP_009589972.2 PREDICTED: DNA repair helicase XPB1
           [Nicotiana tomentosiformis]
          Length = 511

 Score =  211 bits (536), Expect = 3e-61
 Identities = 114/204 (55%), Positives = 145/204 (71%), Gaps = 5/204 (2%)
 Frame = -2

Query: 827 REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
           ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 235 KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 294

Query: 650 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
           G TSH ER  +L+ F+T  +  TVFLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 295 GATSHVERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 354

Query: 470 RILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 303
           RILR K R+ Q  ++GG     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 355 RILRAKGRH-QDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 413

Query: 302 PPEGRGDLIFARPEVQAQLLKEAL 231
           PP+   +L + R + Q QLL + L
Sbjct: 414 PPDSGPELSYHRLDDQLQLLGKVL 437


>EDZ71579.1 YIL143Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 297

 Score =  202 bits (515), Expect = 1e-60
 Identities = 112/220 (50%), Positives = 146/220 (66%)
 Frame = -2

Query: 797 LYGVNPMKLMACEYLIKYHEAQKDKIIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLV 618
           LY +NP K  AC++LI+YHE + DKIIVFSDN++AL++  + + KP I G T  +ER+ +
Sbjct: 34  LYIMNPTKFQACQFLIQYHERRGDKIIVFSDNVYALQEYALKMGKPFIYGSTPQQERMNI 93

Query: 617 LKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQ 438
           L+ F+  D+  T+FLSKVGDTSIDLPEAT +IQISS   SRRQEAQRLGRILR K RN++
Sbjct: 94  LQNFQYNDQINTIFLSKVGDTSIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKRRNDE 153

Query: 437 GMLSGGTAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEV 258
           G      A FYSLVS+DT EM Y+TKRQ FLV+QGY F  +T+    E   +L +A P  
Sbjct: 154 GF----NAFFYSLVSKDTQEMYYSTKRQAFLVDQGYAFKVITHLHGMENIPNLAYASPRE 209

Query: 257 QAQLLKEALQDKSVEEVPKEQPKKRKPDAGRHDLFRKRYQ 138
           + +LL+E L  K+ E    E         GR     KR++
Sbjct: 210 RRELLQEVLL-KNEEAAGIEVGDDADNSVGRGSNGHKRFK 248


>KDO76291.1 hypothetical protein CISIN_1g010184mg [Citrus sinensis]
          Length = 512

 Score =  207 bits (527), Expect = 6e-60
 Identities = 111/203 (54%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
 Frame = -2

Query: 827 REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
           ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 235 KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 294

Query: 650 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
           G TSH ER  +L+ F+      T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 295 GATSHVERTKILQAFKCSRDLNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 354

Query: 470 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 300
           RILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 355 RILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMFYSTKRQQFLIDQGYSFKVITSLPP 414

Query: 299 PEGRGDLIFARPEVQAQLLKEAL 231
           P+   DL + R + Q  LL + L
Sbjct: 415 PDSGADLSYHRLDEQLALLGKVL 437


>KDO76293.1 hypothetical protein CISIN_1g010184mg [Citrus sinensis]
          Length = 516

 Score =  207 bits (527), Expect = 6e-60
 Identities = 111/203 (54%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
 Frame = -2

Query: 827 REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
           ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 235 KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 294

Query: 650 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
           G TSH ER  +L+ F+      T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 295 GATSHVERTKILQAFKCSRDLNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 354

Query: 470 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 300
           RILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 355 RILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMFYSTKRQQFLIDQGYSFKVITSLPP 414

Query: 299 PEGRGDLIFARPEVQAQLLKEAL 231
           P+   DL + R + Q  LL + L
Sbjct: 415 PDSGADLSYHRLDEQLALLGKVL 437


>XP_004298821.1 PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp.
            vesca]
          Length = 768

 Score =  211 bits (538), Expect = 1e-59
 Identities = 113/203 (55%), Positives = 140/203 (68%), Gaps = 4/203 (1%)
 Frame = -2

Query: 827  REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
            ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 490  KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 549

Query: 650  GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
            G TSH ER  +L+ F+T     TVFLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 550  GATSHVERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 609

Query: 470  RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 300
            RILR K +    M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 610  RILRAKGKLRDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 669

Query: 299  PEGRGDLIFARPEVQAQLLKEAL 231
            P+   DL + R + Q QLL + L
Sbjct: 670  PDSGADLSYHRLDEQLQLLSKVL 692


>XP_019267166.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana attenuata] OIT34566.1
            dna repair helicase xpb1 [Nicotiana attenuata]
          Length = 769

 Score =  211 bits (538), Expect = 1e-59
 Identities = 114/204 (55%), Positives = 145/204 (71%), Gaps = 5/204 (2%)
 Frame = -2

Query: 827  REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
            ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 493  KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 552

Query: 650  GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
            G TSH ER  +L+ F+T  +  TVFLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 553  GATSHVERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 612

Query: 470  RILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 303
            RILR K R +Q  ++GG     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 613  RILRAKGR-QQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 671

Query: 302  PPEGRGDLIFARPEVQAQLLKEAL 231
            PP+   +L + R + Q QLL + L
Sbjct: 672  PPDSGPELSYHRLDEQLQLLGKVL 695


>OEL33778.1 DNA repair helicase XPB2, partial [Dichanthelium oligosanthes]
          Length = 452

 Score =  205 bits (521), Expect = 1e-59
 Identities = 110/203 (54%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
 Frame = -2

Query: 827 REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
           ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL    M L KPMI 
Sbjct: 178 KKENSKKKQVLYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTAYAMKLRKPMIY 237

Query: 650 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
           G TSH ER  +L +F+   +  T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 238 GATSHAERTRILYQFKNSPEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 297

Query: 470 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 300
           RILR K +++  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 298 RILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 357

Query: 299 PEGRGDLIFARPEVQAQLLKEAL 231
           PE   +L F   + Q  LL + L
Sbjct: 358 PEEGPNLSFYTLDDQLDLLGKVL 380


>OAY56500.1 hypothetical protein MANES_02G021700 [Manihot esculenta]
          Length = 768

 Score =  211 bits (537), Expect = 1e-59
 Identities = 115/226 (50%), Positives = 150/226 (66%), Gaps = 4/226 (1%)
 Frame = -2

Query: 827  REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
            ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 490  KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 549

Query: 650  GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
            G TSH ER  +L+ F+T  +  T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 550  GATSHAERTKILQAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 609

Query: 470  RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 300
            RILR K +++  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 610  RILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 669

Query: 299  PEGRGDLIFARPEVQAQLLKEALQDKSVEEVPKEQPKKRKPDAGRH 162
            P+   DL +   + Q  LL + L +   + V  EQ ++   D   H
Sbjct: 670  PDSGADLSYYHLDEQLSLLAKVL-NAGDDAVGLEQLEEDADDIALH 714


>KJB20625.1 hypothetical protein B456_003G156900 [Gossypium raimondii]
          Length = 497

 Score =  206 bits (523), Expect = 2e-59
 Identities = 110/203 (54%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
 Frame = -2

Query: 827 REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
           ++E    +  LY +NP K  ACE+LI++HE ++ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 218 KKENSKKKQALYVMNPNKFRACEFLIRFHERERGDKIIVFADNLFALVEYAMKLRKPMIY 277

Query: 650 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
           G TSH ER  +L+ F+T     T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 278 GATSHLERTKILQAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 337

Query: 470 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 300
           RILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 338 RILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 397

Query: 299 PEGRGDLIFARPEVQAQLLKEAL 231
           P+   DL +   + Q  LL + L
Sbjct: 398 PDAGADLSYYHLDEQLALLGKVL 420


>XP_018633737.1 PREDICTED: DNA repair helicase XPB1-like [Nicotiana tomentosiformis]
          Length = 762

 Score =  211 bits (536), Expect = 2e-59
 Identities = 114/204 (55%), Positives = 145/204 (71%), Gaps = 5/204 (2%)
 Frame = -2

Query: 827  REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
            ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 486  KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 545

Query: 650  GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
            G TSH ER  +L+ F+T  +  TVFLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 546  GATSHVERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 605

Query: 470  RILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 303
            RILR K R+ Q  ++GG     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 606  RILRAKGRH-QDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 664

Query: 302  PPEGRGDLIFARPEVQAQLLKEAL 231
            PP+   +L + R + Q QLL + L
Sbjct: 665  PPDSGPELSYHRLDDQLQLLGKVL 688


>XP_016498300.1 PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
          Length = 769

 Score =  211 bits (536), Expect = 2e-59
 Identities = 114/204 (55%), Positives = 145/204 (71%), Gaps = 5/204 (2%)
 Frame = -2

Query: 827  REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
            ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 493  KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 552

Query: 650  GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
            G TSH ER  +L+ F+T  +  TVFLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 553  GATSHVERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 612

Query: 470  RILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 303
            RILR K R+ Q  ++GG     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 613  RILRAKGRH-QDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 671

Query: 302  PPEGRGDLIFARPEVQAQLLKEAL 231
            PP+   +L + R + Q QLL + L
Sbjct: 672  PPDSGPELSYHRLDDQLQLLGKVL 695


>XP_016476264.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana tabacum]
          Length = 769

 Score =  211 bits (536), Expect = 2e-59
 Identities = 114/204 (55%), Positives = 145/204 (71%), Gaps = 5/204 (2%)
 Frame = -2

Query: 827  REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
            ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 493  KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 552

Query: 650  GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
            G TSH ER  +L+ F+T  +  TVFLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 553  GATSHVERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 612

Query: 470  RILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 303
            RILR K R+ Q  ++GG     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 613  RILRAKGRH-QDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 671

Query: 302  PPEGRGDLIFARPEVQAQLLKEAL 231
            PP+   +L + R + Q QLL + L
Sbjct: 672  PPDSGPELSYHRLDDQLQLLGKVL 695


>XP_009790427.1 PREDICTED: DNA repair helicase XPB1 [Nicotiana sylvestris]
            XP_009790428.1 PREDICTED: DNA repair helicase XPB1
            [Nicotiana sylvestris]
          Length = 769

 Score =  211 bits (536), Expect = 2e-59
 Identities = 114/204 (55%), Positives = 145/204 (71%), Gaps = 5/204 (2%)
 Frame = -2

Query: 827  REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
            ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 493  KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 552

Query: 650  GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
            G TSH ER  +L+ F+T  +  TVFLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 553  GATSHVERTKILEAFKTSKEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 612

Query: 470  RILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 303
            RILR K R+ Q  ++GG     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 613  RILRAKGRH-QDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 671

Query: 302  PPEGRGDLIFARPEVQAQLLKEAL 231
            PP+   +L + R + Q QLL + L
Sbjct: 672  PPDSGPELSYHRLDDQLQLLGKVL 695


>XP_015896113.1 PREDICTED: DNA repair helicase XPB1 [Ziziphus jujuba]
          Length = 771

 Score =  211 bits (536), Expect = 2e-59
 Identities = 124/259 (47%), Positives = 157/259 (60%), Gaps = 4/259 (1%)
 Frame = -2

Query: 827  REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
            ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL +  M L KPMI 
Sbjct: 493  KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 552

Query: 650  GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
            G TSH ER  +L+ F+T     T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 553  GATSHVERTKILEAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 612

Query: 470  RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 300
            RILR K + +  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 613  RILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 672

Query: 299  PEGRGDLIFARPEVQAQLLKEALQDKSVEEVPKEQPKKRKPDAGRHDLFRKRYQKH*RLR 120
            P+   DL + R E Q  LL + L     + V  EQ ++   D   H   R          
Sbjct: 673  PDSGADLSYHRLEDQLALLSKVL-SAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMSG 731

Query: 119  *NGLPGMNSSESPKPCQKG 63
             NG+  M  S   K   +G
Sbjct: 732  ANGMVYMEYSTGRKLAGQG 750


>4ERN_A Chain A, Crystal Structure Of The C-terminal Domain Of Human
           Xpb/ercc-3 Excision Repair Protein At 1.80 A
          Length = 289

 Score =  199 bits (506), Expect = 3e-59
 Identities = 114/215 (53%), Positives = 145/215 (67%), Gaps = 4/215 (1%)
 Frame = -2

Query: 797 LYGVNPMKLMACEYLIKYHEAQKDKIIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLV 618
           LY +NP K  AC++LIK+HE + DKIIVF+DN+FAL++  + LNKP I G TS  ER+ +
Sbjct: 40  LYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQI 99

Query: 617 LKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQ 438
           L+ F+   K  T+F+SKVGDTS DLPEA V+IQISS G SRRQEAQRLGR+LR K    +
Sbjct: 100 LQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAK----K 155

Query: 437 GMLSGG-TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPE 261
           GM++    A FYSLVSQDT EM Y+TKRQ+FLV+QGY+F  +T     E   DL F+  E
Sbjct: 156 GMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGME-EEDLAFSTKE 214

Query: 260 VQAQLLKEALQDKSV---EEVPKEQPKKRKPDAGR 165
            Q QLL++ L    +   EEV   +   R   A R
Sbjct: 215 EQQQLLQKVLAATDLDAEEEVVAGEFGSRSSQASR 249


>BAS73810.1 Os01g0691600, partial [Oryza sativa Japonica Group]
          Length = 522

 Score =  205 bits (522), Expect = 4e-59
 Identities = 109/203 (53%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
 Frame = -2

Query: 827 REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
           ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVF+DNLFAL    M L KPMI 
Sbjct: 247 KKENSKKKQVLYAMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTSYAMKLRKPMIY 306

Query: 650 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
           G TSH ER  +L +F+      T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 307 GSTSHVERTRILHQFKNSSDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 366

Query: 470 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 300
           RILR K +++  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 367 RILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 426

Query: 299 PEGRGDLIFARPEVQAQLLKEAL 231
           PE   +L +     Q +LL + L
Sbjct: 427 PEELPNLKYYTLNDQLELLAQLL 449


>JAT61922.1 DNA repair helicase XPB1 [Anthurium amnicola]
          Length = 770

 Score =  210 bits (534), Expect = 4e-59
 Identities = 113/203 (55%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
 Frame = -2

Query: 827  REEKRSVQHTLYGVNPMKLMACEYLIKYHEAQK-DKIIVFSDNLFALEKMGMVLNKPMIK 651
            ++E    +  LY +NP K  ACE+LI++HE Q+ DKIIVFSDNLFAL    M L KPMI 
Sbjct: 492  KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFSDNLFALTAYAMKLRKPMIY 551

Query: 650  GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 471
            G TSH+ER  +L  F+      T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 552  GATSHQERTRILHAFKHSPDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 611

Query: 470  RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 300
            RILR K R +  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 612  RILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMFYSTKRQQFLIDQGYSFKIITSLPP 671

Query: 299  PEGRGDLIFARPEVQAQLLKEAL 231
            P+   +L F R E Q  LL + L
Sbjct: 672  PDSGAELSFDRREDQLDLLNKLL 694


>AAH24446.1 Ercc3 protein, partial [Mus musculus]
          Length = 252

 Score =  197 bits (501), Expect = 5e-59
 Identities = 107/190 (56%), Positives = 137/190 (72%), Gaps = 1/190 (0%)
 Frame = -2

Query: 797 LYGVNPMKLMACEYLIKYHEAQKDKIIVFSDNLFALEKMGMVLNKPMIKGETSHEERLLV 618
           LY +NP K  AC++LIK+HE + DKIIVF+DN+FAL++  + LNKP I G TS  ER+ +
Sbjct: 3   LYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQI 62

Query: 617 LKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQ 438
           L+ F+   K  T+F+SKVGDTS DLPEA V+IQISS G SRRQEAQRLGR+LR K    +
Sbjct: 63  LQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAK----K 118

Query: 437 GMLSGG-TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPE 261
           GM++    A FYSLVSQDT EM Y+TKRQ+FLV+QGY+F  +T     E   +L F+  E
Sbjct: 119 GMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGME-EEELAFSTKE 177

Query: 260 VQAQLLKEAL 231
            Q QLL++ L
Sbjct: 178 EQQQLLQKVL 187