BLASTX nr result
ID: Ephedra29_contig00008459
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00008459
(1615 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010255177.1 PREDICTED: pentatricopeptide repeat-containing pr... 234 1e-66
XP_006852897.2 PREDICTED: putative pentatricopeptide repeat-cont... 226 1e-63
XP_010664915.1 PREDICTED: putative pentatricopeptide repeat-cont... 199 1e-53
XP_008777992.1 PREDICTED: putative pentatricopeptide repeat-cont... 196 2e-52
XP_010909359.1 PREDICTED: pentatricopeptide repeat-containing pr... 188 2e-49
XP_017254804.1 PREDICTED: putative pentatricopeptide repeat-cont... 187 4e-49
XP_009409010.1 PREDICTED: pentatricopeptide repeat-containing pr... 177 3e-45
ERN14364.1 hypothetical protein AMTR_s00033p00222240 [Amborella ... 171 5e-45
XP_010671552.1 PREDICTED: pentatricopeptide repeat-containing pr... 176 6e-45
KZM92608.1 hypothetical protein DCAR_020027 [Daucus carota subsp... 173 3e-44
KNA15281.1 hypothetical protein SOVF_099680 [Spinacia oleracea] 166 3e-41
XP_019174103.1 PREDICTED: pentatricopeptide repeat-containing pr... 162 4e-40
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 157 1e-38
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ... 154 1e-37
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 154 1e-37
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 153 2e-37
XP_020102032.1 pentatricopeptide repeat-containing protein At1g1... 148 2e-35
XP_010540380.1 PREDICTED: pentatricopeptide repeat-containing pr... 142 6e-33
XP_010540379.1 PREDICTED: pentatricopeptide repeat-containing pr... 142 2e-32
XP_010520854.1 PREDICTED: pentatricopeptide repeat-containing pr... 140 9e-32
>XP_010255177.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Nelumbo nucifera]
Length = 564
Score = 234 bits (598), Expect = 1e-66
Identities = 154/516 (29%), Positives = 266/516 (51%), Gaps = 11/516 (2%)
Frame = +1
Query: 4 SFRNTTPSIPSRDSSQVWKTWGNFRCLVKEISLNKSNHKVIQVLDNELRVISKLDSVSLL 183
SF TT S+ + +V+ F L++ +S N NH+ + LD L DS + +
Sbjct: 41 SFNQTTASVSPKKIGRVFYL-KEFCALIRNLSNNNRNHEALSALDLMLTKTHYFDSATSV 99
Query: 184 IMNDGLFRLKKLGRMKALLSELWRRDDLSRAFMSDIVLNCAL--GELSDIQELWRELSES 357
++ DGL RL+ LGR KALL L +S F+ +V++C + G + D W E+ S
Sbjct: 100 LVIDGLSRLRMLGRAKALLKNLRSNGKVSDYFLYSLVIHCLVNVGRIEDADSFWNEVCGS 159
Query: 358 DF------DHELLIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQA 519
D D ++YLC+ G LE ++ + V+ +L +SY+ L+ ALC +
Sbjct: 160 DLSSDRRIDSSEFVIYLCKFGRDLEIERICDRVLMGG--GALRFQSYIALIGALCRESKG 217
Query: 520 DSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSL 699
A V++ MK+ G D TY + QC +A+ +++ + + D+ + S
Sbjct: 218 HLAKAVLQEMKRKGLKPDNLTYLIMFQCFCRNGELSEADSILRKLVRRKYDMDICIYGSF 277
Query: 700 IRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRP--RTLLQLDFRTQVPKPVAFSTY 873
I GLCKS ++ EA+ LF +L + SGV + + R + QL+ + VP+ +A+ Y
Sbjct: 278 IYGLCKSSKYREADKLFKRLIKVDD-SGVSGNGSLKQGRRAIFQLNCKGAVPEIMAYEYY 336
Query: 874 IKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKI 1053
+SLC +GK++EA+ LLK+M++K +P ++R+FI A ++G + A+ F +KK
Sbjct: 337 CRSLCDMGKLDEAETLLKEMMRKRTVPEGCVYRSFIKALFQAGRDEDAIRFFNAMKKKGF 396
Query: 1054 LSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGT-MVPADICNALLHSLIEVGRIADAN 1230
+ + +V GLCE + D A +F + G+ +V I N L+ S ++V R+ +A
Sbjct: 397 VRQEEIAGFIVMGLCEMDRVDDAWMIFYDIFVKGSVLVERSISNCLIGSYLKVRRLGEAE 456
Query: 1231 EIVENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILF 1410
+ E + K G ++ +T+ V + LC+Q + A+ F + KK N Y ++
Sbjct: 457 RLFERM--KEGSFGGLDASTYVVFVNGLCEQGELTNALLVFDEMLEKKIPVNGTIYEVIL 514
Query: 1411 SGSLSMGQYKVCHELLKEMIELGHISTFARLTALLN 1518
G + G+ + H L +MIE GH+ +++R LL+
Sbjct: 515 RGLCTCGRIEEAHMYLNKMIENGHLVSYSRWKVLLD 550
Score = 64.3 bits (155), Expect = 3e-07
Identities = 85/394 (21%), Positives = 161/394 (40%), Gaps = 33/394 (8%)
Frame = +1
Query: 118 KVIQVLDNELRVISKLDSVSLLIMNDGLFRLKKLGRMKALLSELWRR----DDLSRAFMS 285
++ ++ D L L S + + L R K KA+L E+ R+ D+L+ M
Sbjct: 184 EIERICDRVLMGGGALRFQSYIALIGALCRESKGHLAKAVLQEMKRKGLKPDNLTYLIMF 243
Query: 286 DIVLNCALGELSDIQELWRELSESDFDHELLI----MY-LCENGEALEAFKLFNLVI--- 441
C GELS+ + R+L +D ++ I +Y LC++ + EA KLF +I
Sbjct: 244 QCF--CRNGELSEADSILRKLVRRKYDMDICIYGSFIYGLCKSSKYREADKLFKRLIKVD 301
Query: 442 ------NSELQSSL-------------DERSYVVLVQALCEAGQADSANNVVRHMKKLGY 564
N L+ + +Y ++LC+ G+ D A +++ M +
Sbjct: 302 DSGVSGNGSLKQGRRAIFQLNCKGAVPEIMAYEYYCRSLCDMGKLDEAETLLKEMMRKRT 361
Query: 565 SMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANN 744
+ Y I+ +A DA + M K + ++ GLC+ ++A
Sbjct: 362 VPEGCVYRSFIKALFQAGRDEDAIRFFNAMKKKGFVRQEEIAGFIVMGLCEMDRVDDAWM 421
Query: 745 LFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLL 924
+F YD+ + L++ + +Y+K + ++ EA+ L
Sbjct: 422 IF-------------YDIFVKGSVLVERSISNCL-----IGSYLK----VRRLGEAERLF 459
Query: 925 KKMLQKGWIPGNDI--WRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLC 1098
++M ++G G D + F+ C+ GE+ AL + + KI N + ++ GLC
Sbjct: 460 ERM-KEGSFGGLDASTYVVFVNGLCEQGELTNALLVFDEMLEKKIPVNGTIYEVILRGLC 518
Query: 1099 EAKKCDQAMDLFKKLMNDGTMVPADICNALLHSL 1200
+ ++A K++ +G +V LL S+
Sbjct: 519 TCGRIEEAHMYLNKMIENGHLVSYSRWKVLLDSV 552
>XP_006852897.2 PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Amborella trichopoda]
Length = 514
Score = 226 bits (575), Expect = 1e-63
Identities = 139/488 (28%), Positives = 259/488 (53%), Gaps = 6/488 (1%)
Frame = +1
Query: 73 FRCLVKEISLNKSNHKVIQVLDNELRVISKLDSVSLLIMNDGLFRLKKLGRMKALLSELW 252
F L + N + ++ LD+ L+ DS + +++ L + +L R K +LS+L
Sbjct: 4 FNSLFTVLKKENKNLQALRSLDSLLKNDLLFDSATSVLVIHRLCEINQLVRAKKVLSQLT 63
Query: 253 RRDDLSRAFMSDIVLNCAL--GELSDIQELWREL----SESDFDHELLIMYLCENGEALE 414
R +S F+ IV++C + G + D++ + E+ S ++ + + YLC+ G+A E
Sbjct: 64 RNPKISGFFLYSIVIHCIVKDGRIKDVECTFEEIIGNGSLANINVSTFMNYLCKLGKARE 123
Query: 415 AFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKL 594
A + V+ + L+ +SY+ L+ LC+ +A A V+R M++ G+ D T+ +
Sbjct: 124 AKNVCQRVLMENV--ILEYQSYLALIGGLCQKNEAFLAGEVLRAMEQNGFQPDYITHLLM 181
Query: 595 IQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTANKN 774
QC Y+A+I + M +K + D+ + S I GLCKS + EA+ LF KL NK
Sbjct: 182 FQCFCRLGLVYEADIILRSMIMKNYTLDICVYGSFIHGLCKSGKLREADKLFKKLI-NKE 240
Query: 775 MSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIP 954
+ +V R + QL+ +P+ +A+ Y +SLC +G++EEA +LK ++ K +P
Sbjct: 241 TTLRVPNVKPGRRAIFQLNVSGAIPEIMAYEAYCRSLCNVGQLEEAGVVLKALMSKRNVP 300
Query: 955 GNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAMDLF 1134
++ +FI C++G V +A+EF ++K +SN + +C++ LCE K ++A+ LF
Sbjct: 301 ETCVYGSFIRGLCRAGRVSEAMEFFNTMRKKGWVSNVEITLCVIKALCEIAKTNEALGLF 360
Query: 1135 KKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGECVIMNVTTHNVLLKIL 1314
+L G + + N L ++ DA + E IM +G C + +T+++++ L
Sbjct: 361 DELSKGGFVPTTSVINDFLTGYWRERQLNDAMRLFERIM--DGSCGKPDASTYSIMVTGL 418
Query: 1315 CDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIELGHISTF 1494
C+ ++ +A+ FQ + K N Y I+ G +G ++ H LL EMIE G+++++
Sbjct: 419 CENGHLSKALCIFQEMINNKVPVNGSLYDIIIRGLCKIGSFQEAHMLLNEMIENGYLASY 478
Query: 1495 ARLTALLN 1518
++L++
Sbjct: 479 LGWSSLVD 486
>XP_010664915.1 PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Vitis vinifera]
Length = 536
Score = 199 bits (507), Expect = 1e-53
Identities = 142/503 (28%), Positives = 252/503 (50%), Gaps = 6/503 (1%)
Frame = +1
Query: 22 PSIPSRDSSQVWKTWGNFRCLVKEISLNKSNHKVIQVLDNELRVISKLDSVSLLIMNDGL 201
P+ P SS + + + +S N N+K + L++ L LD+ + +++ L
Sbjct: 23 PAAPPPPSSDHFLYLKDLFSIFTALSNNPRNYKALSTLNSLLSQAHHLDAATSVLVIHAL 82
Query: 202 FRLKKLGRMKALLSELWRRDDLSRAFMSDIVLNCAL--GELSDIQELWRELSESD-FDHE 372
+L KL R K+L+ L + +LS F+ +V++ + G + +++ W ++ D
Sbjct: 83 SQLNKLQRAKSLIFNLKSQANLSHYFLYSVVIDSVVKHGTIDEVEAFWADIFRPPTIDVS 142
Query: 373 LLIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRHMK 552
++Y+C+ G+A + ++ + ++ S L ++SY L+ ALC + A V+R MK
Sbjct: 143 DYVIYVCKFGDANDIRRVSHRILMG--CSGLRQQSYAGLIGALCRENEGVLAKEVLRQMK 200
Query: 553 KLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSREFE 732
G+ D T L +C N +A++ +++ + + DV + S I GLCKS +F
Sbjct: 201 SRGFRCDDITSFVLFRCFCRNGNLDEADLILRKLVKRRYHIDVCVYGSFIHGLCKSGKFR 260
Query: 733 EANNLFIKLTANK--NMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIE 906
EA LF KL + G R R + QL+ VP+ +A+ Y +SLC GK++
Sbjct: 261 EAGKLFRKLIKKDCFKVDGAELLKEGR-RAIFQLNCEGVVPEVMAYEIYFRSLCSAGKLD 319
Query: 907 EADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLV 1086
EA+ LLKKM+++ +P + +F+ A C++G A++F +K ++ + ++
Sbjct: 320 EAEVLLKKMMKRRTVPEICVHGSFVKALCRAGREVDAMKFFYVERKKGLIQVDELAGFVI 379
Query: 1087 HGLCEAKKCDQAMDLF-KKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNG 1263
LC K D A +F + L N G + P N +L S EVGR+A+A ++ ++ + G
Sbjct: 380 KELCGIGKVDDAGRIFHETLANGGFVNPTAASNCILASYWEVGRVAEAEKLFGSM--QTG 437
Query: 1264 ECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKV 1443
++ T+ ++ C+Q NV +A+S F I N + Y I+ G G+ K
Sbjct: 438 GFGWPDLLTYTTMVSGYCNQGNVSKAVSLFGEIAHSNIPVNGKLYEIIVRGLCDGGRLKE 497
Query: 1444 CHELLKEMIELGHISTFARLTAL 1512
H L EMI+ GH+ +F R AL
Sbjct: 498 AHMYLNEMIKHGHMISFTRWKAL 520
>XP_008777992.1 PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Phoenix dactylifera]
Length = 541
Score = 196 bits (498), Expect = 2e-52
Identities = 141/497 (28%), Positives = 250/497 (50%), Gaps = 21/497 (4%)
Frame = +1
Query: 70 NFRCLVKEISLNKSNHKVIQVLDNELRVISKLDSVSLLIMNDGLFRLKKLGRMKALLSEL 249
+F LV+ +S N++N +++ +D+ L LDS + +++ GL R KKL R KA+LS L
Sbjct: 32 DFSALVRNLSRNRNNPRLLAAVDSTLAKTPLLDSTTSVLVLRGLSRCKKLTRAKAVLSGL 91
Query: 250 WRRDDLSRAFMSDIVLNCALGE--LSDIQELWREL----SESDFDHELLIMYLCENGE-A 408
R + F+ +VL C + E + D++ +WRE+ S D ++YLC E A
Sbjct: 92 KERGTIPEPFLYSLVLQCLVPESPIRDVESVWREIGSGPSNRCMDASDFVLYLCRRSEDA 151
Query: 409 LEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADS--ANNVVRHMKKLGYSMDVTT 582
E ++++ V +S L YV L+ A+CE + A NV+R M++ G+ DV T
Sbjct: 152 AEIERVYHRVSSSRWD--LRREGYVALIGAMCEGNNPNPGLARNVLREMEEKGFEADVLT 209
Query: 583 YNKLIQCCAEAANWYDAEIYAKEMFIKC-HIPDVWTFDSLIRGLCKSREFEEANNLFIKL 759
Y L Q N +A+ + + + H DV + + LCKS EA LF KL
Sbjct: 210 YFALFQSFCRTGNVLEADSVLRTLVDRWDHELDVSVYGNFFYSLCKSGRLREARKLFDKL 269
Query: 760 TANKNMSGVYYDVGTRP--RTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKM 933
V +P R + QL +V K +AF Y++SLC G++E+A+ +LK+
Sbjct: 270 AKKDRGLEVNPVPCLKPGRRVIFQLSPSNKVTKVMAFEAYVRSLCSAGRVEDAERMLKEA 329
Query: 934 LQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKC 1113
+K +P + R+FI A ++G VD A+ F K+ + M ++ GLCE +
Sbjct: 330 ARKSMVPEICVCRSFIEALFRAGRVDDAIGFFEAEKRRRHAEAGAMAAAVIEGLCEMGRV 389
Query: 1114 DQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGEC----VIMN 1281
D+ L +++++G + A + N +L S E GR+ +A + + + ++G C
Sbjct: 390 DEGCRLLCEMVDEGFVPTAKVWNWILESYWEEGRVWEATGLFDRM--RSGICGGGGARPT 447
Query: 1282 VTTHNVLLKILCDQRNVVEAMSHFQRIKTKK-----GLCNKESYRILFSGSLSMGQYKVC 1446
+T++V++ + +++ A+S + + +K LC+ + I + G+ ++
Sbjct: 448 ASTYSVMIHGFLRKGDIMTAISLLEDMAREKMPVSFSLCSGVALSI-----HAQGELELL 502
Query: 1447 HELLKEMIELGHISTFA 1497
H+ L +MIE G + ++A
Sbjct: 503 HDYLNKMIENGILVSYA 519
>XP_010909359.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63400-like
[Elaeis guineensis]
Length = 539
Score = 188 bits (477), Expect = 2e-49
Identities = 131/496 (26%), Positives = 249/496 (50%), Gaps = 15/496 (3%)
Frame = +1
Query: 70 NFRCLVKEISLNKSNHKVIQVLDNELRVISKLDSVSLLIMNDGLFRLKKLGRMKALLSEL 249
+F LV+ +S N +N +++ LD L LDS + +++ GL KKL R K +LS L
Sbjct: 32 DFSALVRSLSRNLNNPRLLAALDCVLAKTPLLDSTTSVLVLRGLSHCKKLTRAKTVLSGL 91
Query: 250 WRRDDLSRAFMSDIVLNCALGE--LSDIQELWRELSESDFDHEL----LIMYLCENGE-A 408
R + F+ +VL C + E + D++ +WR++ D + ++YLC GE A
Sbjct: 92 KERGTIPEPFLYSLVLQCLVPESPIRDVESVWRDIGSGPSDRCMDALDFVVYLCRRGEDA 151
Query: 409 LEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADS--ANNVVRHMKKLGYSMDVTT 582
E ++++ V +S L YV L+ A+CE + A NV+R M++ G+ D T
Sbjct: 152 AEIERVYHRVSSSRWD--LRREGYVALIGAICEGNNPNPRLARNVLREMEEKGFEADELT 209
Query: 583 YNKLIQCCAEAANWYDAEIYAKEMFIKC-HIPDVWTFDSLIRGLCKSREFEEANNLFIKL 759
Y L + N +A+ + + + H D+ + + GLCKS + EA LF KL
Sbjct: 210 YFSLFRSFCRTGNVLEADSVLRSLVDRWDHELDISVYGNFFYGLCKSGRWREARKLFDKL 269
Query: 760 TANKNMSGVYYDVGTRP--RTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKM 933
+ V +P R + Q +V K +AF Y++SLC G++E+A+ +LK+
Sbjct: 270 SKKDGRLEVNPSPRLKPGRRIIFQFSPSNKVTKVMAFEAYVRSLCSAGRVEDAERMLKEA 329
Query: 934 LQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKC 1113
+K + ++R++I A ++G VD A+ F K+ + + M + ++ GLC+ +
Sbjct: 330 ARKNAVLEICVYRSYIEALFRAGRVDDAIGFFEAEKRKRHIEVGGMAVAVIEGLCKRGRV 389
Query: 1114 DQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGEC---VIMNV 1284
D+ L +++++G + A + N ++ S E GR+A+A + + + ++G C +
Sbjct: 390 DEGCQLLCEILDEGFVPTAKVWNWIVESYWEEGRVAEATGLFDRM--RDGSCGGGSRPDA 447
Query: 1285 TTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVCHELLKE 1464
+T++V++ + + + A+S + + +K N + + G+++ + L +
Sbjct: 448 STYSVMIHGFLKKGDGMTAISLLEDMAREKMPVNFSLCSAVALSFHAQGKFEELNSYLNK 507
Query: 1465 MIELGHISTFARLTAL 1512
MIE G + ++A +L
Sbjct: 508 MIENGILVSYAAWESL 523
>XP_017254804.1 PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Daucus carota subsp. sativus]
Length = 546
Score = 187 bits (475), Expect = 4e-49
Identities = 129/475 (27%), Positives = 233/475 (49%), Gaps = 8/475 (1%)
Frame = +1
Query: 85 VKEISLNKSNHKVIQVLDNELRVISKLDSVSLLIMNDGLFRLKKLGRMKALLSELWRRDD 264
+K +S N N + LD+ L LDS + LI+ L +KKLGR K + +L
Sbjct: 57 IKALSENPRNKNALTSLDSLLGQAHFLDSAASLIVIQYLCEIKKLGRAKDVFLKLKSEGK 116
Query: 265 LSRAFMSDIVLNCALGE--LSDIQELWRELSESDFDHELL--IMYLCENGEALEAFKLFN 432
L + +V +C + + D++ +W EL +D ++ ++Y+C+ E +F
Sbjct: 117 LKDCILFSLVYDCLVANSGIHDVEVVWNELCGNDLKIDVCDYVVYVCKFCGREEIKGIFE 176
Query: 433 LVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAE 612
V+ L SY L+ ALC + + V+R M LG +D +Y L +C
Sbjct: 177 RVVMGG--RVLRRESYGALIGALCRENEGELGKEVMRVMGGLGIEVDCFSYYVLFRCFCR 234
Query: 613 AANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYY 792
N +A+ +E+ + D+ + + + GLCK+ +F EA LF++LT + G Y
Sbjct: 235 NGNVDEADWVLRELVKREFYIDICVYGNFLYGLCKTGKFREAKKLFLRLTKQDGVGG-YK 293
Query: 793 DVGTRP---RTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGND 963
+V R + QL VP +A+ +Y +SLC IG+++EA+ LLKKM+ +P
Sbjct: 294 NVDFLKEGRRVIFQLKCEDNVPNILAYESYFRSLCDIGRLDEAEVLLKKMMNSRIVPEIC 353
Query: 964 IWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKL 1143
++ +FI A + A+ F KK ++ + ++ GLC+ +K D+A+ +F +
Sbjct: 354 VYGSFIKALFAADRDKDAIRFLQVEKKKGLVKVDEIASYVIKGLCQKRKLDEAVRIFDET 413
Query: 1144 MNDGTMV-PADICNALLHSLIEVGRIADANEIVENIMKKNGECVIMNVTTHNVLLKILCD 1320
G + +ICN +L + + GR A+A + + K G + + +T+ V++ C+
Sbjct: 414 SVLGEFLNRTNICNCILGNYWKEGRSAEAENLFRRL--KEGNYGLRDASTYEVMINGYCN 471
Query: 1321 QRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIELGHI 1485
Q N V+A+ FQ + +K + + Y ++ S G + + L +M+E G++
Sbjct: 472 QSNGVKALLLFQEMVDRKIIISCALYEVIIRALCSCGSLREALKYLNDMVESGNM 526
>XP_009409010.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62720-like
isoform X1 [Musa acuminata subsp. malaccensis]
XP_018684569.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g62720-like isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 580
Score = 177 bits (449), Expect = 3e-45
Identities = 132/494 (26%), Positives = 243/494 (49%), Gaps = 19/494 (3%)
Frame = +1
Query: 94 ISLNKSNHKVIQVLDNELRVISKLDSVSLLIMNDGLFRLKKLGRMKALLSELWRRDDLSR 273
+S S+ K + LD+ L LDS + +++ L R KKL R K++LS L +R +
Sbjct: 74 LSKTPSDPKSLAALDSALAEAHLLDSTASVLLIRALSRRKKLTRAKSVLSGLKQRGIVPD 133
Query: 274 AFMSDIVLNCALGE--LSDIQELWREL---------SESDFDHELLIMYLCENG-EALEA 417
F+ +VL C L E + D++ +W ++ SDF ++ LC +A E
Sbjct: 134 LFLYSLVLQCLLPESPIRDVESVWHDIRGGGPDGISGASDF-----VIGLCRRRVDASEI 188
Query: 418 FKLFNLVINSELQSSLDERSYVVLVQALCEAG--QADSANNVVRHMKKLGYSMDVTTYNK 591
+++ V S SL + Y+ L+ A C++ A V+R M++ G+ D TY
Sbjct: 189 EQVYRRVSRSRW--SLSRQRYMALIGAFCQSSCPNPSLARAVLREMEEKGFEADELTYFA 246
Query: 592 LIQCCAEAANWYDAEIYAKEMFIKCHIP-DVWTFDSLIRGLCKSREFEEANNLFIKLTAN 768
+ + N ++A++ + M + + D+ + + + GLCKS + EA LF KL
Sbjct: 247 IFRSFCRVGNVFEADLVLRSMVDRWNCKLDILIYGNFLYGLCKSGKLREARKLFDKLLKK 306
Query: 769 -KNMSGVYYDVGTRP--RTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQ 939
+N+ V +P R + QL + + VAF Y +SLC G++EEA+ LLK+ +
Sbjct: 307 GQNIKDSLIPV-LKPGRRVIFQLSSTKLISETVAFGAYFQSLCKTGRVEEAEMLLKEATE 365
Query: 940 KGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQ 1119
K ++ +FI A C++G + A+E KK + +S + + ++ GLC+ + D
Sbjct: 366 KNIPVETCVYVSFIEALCRAGRAEDAVELLDLEKKKQSVSVGDITVAVIAGLCKLGQVDD 425
Query: 1120 AMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKN-GECVIMNVTTHN 1296
L +++N+G A +CN +L S E GR+ +A + E + N G CV N +T++
Sbjct: 426 GYRLLLEMVNEGVSPTAQVCNWILKSYWEAGRMEEAIGLFEKLRAGNCGGCVRPNASTYS 485
Query: 1297 VLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIEL 1476
+++ + + A+S ++++ +K + + + + G+ + H + +MIE
Sbjct: 486 LMIHGYLGRGDTAMAVSFVEQMEREKMQVDVGLHTSVVRSLYTTGKLEETHHYMNKMIES 545
Query: 1477 GHISTFARLTALLN 1518
G I ++A +N
Sbjct: 546 GTIVSYAEWEEFVN 559
>ERN14364.1 hypothetical protein AMTR_s00033p00222240 [Amborella trichopoda]
Length = 349
Score = 171 bits (434), Expect = 5e-45
Identities = 96/324 (29%), Positives = 176/324 (54%)
Frame = +1
Query: 547 MKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSRE 726
M++ G+ D T+ + QC Y+A+I + M +K + D+ + S I GLCKS +
Sbjct: 1 MEQNGFQPDYITHLLMFQCFCRLGLVYEADIILRSMIMKNYTLDICVYGSFIHGLCKSGK 60
Query: 727 FEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIE 906
EA+ LF KL NK + +V R + QL+ +P+ +A+ Y +SLC +G++E
Sbjct: 61 LREADKLFKKLI-NKETTLRVPNVKPGRRAIFQLNVSGAIPEIMAYEAYCRSLCNVGQLE 119
Query: 907 EADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLV 1086
EA +LK ++ K +P ++ +FI C++G V +A+EF ++K +SN + +C++
Sbjct: 120 EAGVVLKALMSKRNVPETCVYGSFIRGLCRAGRVSEAMEFFNTMRKKGWVSNVEITLCVI 179
Query: 1087 HGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGE 1266
LCE K ++A+ LF +L G + + N L ++ DA + E IM +G
Sbjct: 180 KALCEIAKTNEALGLFDELSKGGFVPTTSVINDFLTGYWRERQLNDAMRLFERIM--DGS 237
Query: 1267 CVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVC 1446
C + +T+++++ LC+ ++ +A+ FQ + K N Y I+ G +G ++
Sbjct: 238 CGKPDASTYSIMVTGLCENGHLSKALCIFQEMINNKVPVNGSLYDIIIRGLCKIGSFQEA 297
Query: 1447 HELLKEMIELGHISTFARLTALLN 1518
H LL EMIE G+++++ ++L++
Sbjct: 298 HMLLNEMIENGYLASYLGWSSLVD 321
>XP_010671552.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial [Beta vulgaris subsp. vulgaris] KMT20573.1
hypothetical protein BVRB_1g005550 [Beta vulgaris subsp.
vulgaris]
Length = 551
Score = 176 bits (446), Expect = 6e-45
Identities = 130/475 (27%), Positives = 229/475 (48%), Gaps = 6/475 (1%)
Frame = +1
Query: 73 FRCLVKEISLNKSNHKVIQVLDNELRVISKLDSVSLLIMNDGLFRLKKLGRMKALLSELW 252
F L K ++ N N +V+ LD+ L DSV+ + + +GL +LKKL R K + L
Sbjct: 56 FHSLTKTLAQNSRNFRVLSQLDSLLSQTELFDSVTSIAIFEGLCKLKKLNRAKNVFLHLK 115
Query: 253 RRDDLSRAFMSDIVLNCAL--GELSDIQELWRELSES-DFDHELLIMYLCENGEALEAFK 423
+ F +V +C + G L D++ W ++S + + ++Y+C+ G+ E K
Sbjct: 116 DNLKVYPYFAFSLVFDCLVKDGNLDDVEVQWNDISNGYEINLSDYVIYVCKCGDFDEIKK 175
Query: 424 LFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQC 603
++ V+ L +SYV L+ LC + A +VV M G+ +D TY + QC
Sbjct: 176 VYERVLMGS--RVLGRQSYVALIGVLCRYDEGLMAKSVVHEMYYRGFRVDDVTYIVVFQC 233
Query: 604 CAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSG 783
+ A+ +++ DV + S + GLC+ +F EA+ LF KL SG
Sbjct: 234 FCRNGDLDGADWVLRKLINGGFDVDVCIYGSFMYGLCEVGKFREASKLFDKLIKRDCFSG 293
Query: 784 VYYDVGTRPR-TLLQLDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGN 960
+ R + QL ++ +P+ + + Y++SLC +GK+++A+ LLKK+++K +
Sbjct: 294 SKAGLLKEGRRAIFQLSYKGVIPEMMVYEMYVRSLCAVGKLDDAELLLKKIMKKSSMAQI 353
Query: 961 DIWRAFIAAFCKSGEVDKALEFC-LPLKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFK 1137
++ +FI A + G + AL+F + KK + S+ +V LCE D AM +F
Sbjct: 354 CVYGSFIKALFRVGREEDALKFFNVECKKGFVCSDELARFVIVQ-LCEKGGVDDAMKIFD 412
Query: 1138 KLMNDGTMV-PADICNALLHSLIEVGRIADANEIVENIMKKNGECVIMNVTTHNVLLKIL 1314
+ T + +CN LL SL + GR +A E + K GE N+ T+ +++
Sbjct: 413 EFTGKSTFISTVALCNCLLGSLWDAGRTMEAERYFEGMNK--GELSPPNIATYRLMVCGF 470
Query: 1315 CDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIELG 1479
C+Q ++ +A+ F+ + +K +K Y + + G +E L M G
Sbjct: 471 CNQGSLGKAIDIFEEMLSKNIPTDKIIYEEVIALLCKQGCPAEAYEYLDSMTRNG 525
>KZM92608.1 hypothetical protein DCAR_020027 [Daucus carota subsp. sativus]
Length = 501
Score = 173 bits (438), Expect = 3e-44
Identities = 117/437 (26%), Positives = 215/437 (49%), Gaps = 8/437 (1%)
Frame = +1
Query: 199 LFRLKKLGRMKALLSELWRRDDLSRAFMSDIVLNCALGE--LSDIQELWRELSESDFDHE 372
L +KKLGR K + +L L + +V +C + + D++ +W EL +D +
Sbjct: 45 LCEIKKLGRAKDVFLKLKSEGKLKDCILFSLVYDCLVANSGIHDVEVVWNELCGNDLKID 104
Query: 373 LL--IMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRH 546
+ ++Y+C+ E +F V+ L SY L+ ALC + + V+R
Sbjct: 105 VCDYVVYVCKFCGREEIKGIFERVVMGG--RVLRRESYGALIGALCRENEGELGKEVMRV 162
Query: 547 MKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSRE 726
M LG +D +Y L +C N +A+ +E+ + D+ + + + GLCK+ +
Sbjct: 163 MGGLGIEVDCFSYYVLFRCFCRNGNVDEADWVLRELVKREFYIDICVYGNFLYGLCKTGK 222
Query: 727 FEEANNLFIKLTANKNMSGVYYDVGTRP---RTLLQLDFRTQVPKPVAFSTYIKSLCGIG 897
F EA LF++LT + G Y +V R + QL VP +A+ +Y +SLC IG
Sbjct: 223 FREAKKLFLRLTKQDGVGG-YKNVDFLKEGRRVIFQLKCEDNVPNILAYESYFRSLCDIG 281
Query: 898 KIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNI 1077
+++EA+ LLKKM+ +P ++ +FI A + A+ F KK ++ +
Sbjct: 282 RLDEAEVLLKKMMNSRIVPEICVYGSFIKALFAADRDKDAIRFLQVEKKKGLVKVDEIAS 341
Query: 1078 CLVHGLCEAKKCDQAMDLFKKLMNDGTMV-PADICNALLHSLIEVGRIADANEIVENIMK 1254
++ GLC+ +K D+A+ +F + G + +ICN +L + + GR A+A + +
Sbjct: 342 YVIKGLCQKRKLDEAVRIFDETSVLGEFLNRTNICNCILGNYWKEGRSAEAENLFRRL-- 399
Query: 1255 KNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQ 1434
K G + + +T+ V++ C+Q N V+A+ FQ + +K + + Y ++ S G
Sbjct: 400 KEGNYGLRDASTYEVMINGYCNQSNGVKALLLFQEMVDRKIIISCALYEVIIRALCSCGS 459
Query: 1435 YKVCHELLKEMIELGHI 1485
+ + L +M+E G++
Sbjct: 460 LREALKYLNDMVESGNM 476
>KNA15281.1 hypothetical protein SOVF_099680 [Spinacia oleracea]
Length = 572
Score = 166 bits (420), Expect = 3e-41
Identities = 126/458 (27%), Positives = 219/458 (47%), Gaps = 28/458 (6%)
Frame = +1
Query: 73 FRCLVKEISLNKSNHKVIQVLDNELRVISKLDSVSLLIMNDGLFRLKKLGRMKALLSELW 252
F L K + N N K + LD+ L DSV+ + + +GL +LKKL R K L L
Sbjct: 62 FFSLAKTLFQNPRNFKALSQLDSLLSHSQSFDSVTSVAIIEGLCQLKKLNRAKNLFLHLK 121
Query: 253 RRDDLSRAFMSDIVLNCAL--GELSDIQELWRELSES-DFDHELLIMYLCENGEALEAFK 423
++ F +V +C + G+L D++ W E+S + ++Y+ + G+ E K
Sbjct: 122 DNLKVNPYFAFSLVFDCLVKDGKLDDVEVQWGEISNGYGINLSDYVIYVSKCGDLDEIKK 181
Query: 424 LFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQC 603
+ + V+ L+ +SYV L+ LC + A ++ M G+++D TY + QC
Sbjct: 182 VCDRVLMGS--RVLERQSYVALIGVLCRYNEGSMAKLLLHEMYCRGFNIDDVTYIVIFQC 239
Query: 604 CAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSG 783
+ A+ ++M D+ ++S + GLCK+ +F+EA LF KL +G
Sbjct: 240 LCRNGDLNAADWELRKMITAGFDVDMCIYESFMHGLCKNGKFKEAKKLFDKLMKRDCFTG 299
Query: 784 VYYDVGTRP-------RTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQK 942
++P R + QL++ + P+ + + YI+SLC +GK+++A+ LLKKM++K
Sbjct: 300 -----SSKPEFLKKGRRVVFQLNYNGEFPEIMVYEMYIRSLCVVGKLDDAEVLLKKMMKK 354
Query: 943 GWIPGNDIWRAFIAAFCKSGEVDKALEFC-LPLKKMKILSNRYMNICLVHGLCEAKKCDQ 1119
+ ++ +FI A ++G + AL+F + KK + SN+ + CE + D
Sbjct: 355 SSMAQVCVYGSFINALFRNGREEDALKFFHVECKKGLVCSNQLARY-MFFQYCEKDRVDD 413
Query: 1120 AMDLFK-----------------KLMNDGTMVPADICNALLHSLIEVGRIADANEIVENI 1248
A F N + P CN LL SL VGRI +A + E
Sbjct: 414 ATKFFNIRTVSSCKDGCGPGRVGSGQNRARINPVADCNCLLGSLWSVGRILEAEKYFE-- 471
Query: 1249 MKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRI 1362
+ KNGE N+ T+ V++ C+ ++ +A+ F+ +
Sbjct: 472 LMKNGELAPPNLATYRVMVCGFCNNGDIRKALDIFEEM 509
>XP_019174103.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Ipomoea nil]
Length = 542
Score = 162 bits (411), Expect = 4e-40
Identities = 123/490 (25%), Positives = 236/490 (48%), Gaps = 7/490 (1%)
Frame = +1
Query: 70 NFRCLVKEISLNKSNHKVIQVLDNELRVISKLDSVSLLIMNDGLFRLKKLGRMKALLSEL 249
+FR L++ +S N N+K + LD L + +I+ D L ++KKL R KA++ L
Sbjct: 50 SFRSLIESLSKNPRNYKALTTLDTFLAQTHCFTPATSVIVIDFLSQIKKLQRAKAVVHSL 109
Query: 250 WRRDDLSRAFMSDIVLNCALGE--LSDIQELWRELSESD--FDHELLIMYLCENGEALEA 417
+ +S F+ +V + + + ++ +W E+ SD I+++C++G E
Sbjct: 110 KCQGKVSDHFLYGLVFEFLVKDENFNAVETVWAEICGSDVRISASDYIIHVCKHGGVDEI 169
Query: 418 FKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLI 597
+++ V+ L+ +S V L+ ALC + A + M G ++D +Y +
Sbjct: 170 KRVYEKVLMGG-SVHLERQSLVALIGALCRVNEGSLAKELAGEMLDRGIAVDDLSYFVIF 228
Query: 598 QCCAEAANWYDAEIYAKEMF-IKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTA--N 768
QC + +A++ ++++ K H DV + S + LCKS + EAN LF +L +
Sbjct: 229 QCFCRNGDVDEADLILRKLWKTKFHF-DVCIYGSFLHALCKSGKLREANKLFCRLIKRDS 287
Query: 769 KNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKGW 948
+S + R + Q+ + +P+ VA+ Y +SLC G+I EA +LLK M +K
Sbjct: 288 SEVSKKAAILKEGRRAIFQMSWEGAIPEIVAYEAYFRSLCSAGRINEAQELLKDMKKKRN 347
Query: 949 IPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAMD 1128
I+ +FI A ++G + AL+F ++ M ++ GLC + D+A++
Sbjct: 348 SLEICIYGSFINALFRAGRAEDALKFFDVESYKGVIRMEDMARFVITGLCYDGRLDEALE 407
Query: 1129 LFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGECVIMNVTTHNVLLK 1308
+F N+G + A N +L R+ +A + + + + G NV+T+ ++
Sbjct: 408 IF----NNG-IACARTLNCILDGYWRARRVVEAERLFQRL--QGGGFGYYNVSTYGTMIN 460
Query: 1309 ILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIELGHIS 1488
C++ NV +A+ + ++K N+ Y ++ G + G+ + + M+E GH
Sbjct: 461 GYCNEGNVSKAVRLLDEMLSRKMSVNQTLYAMIIGGLCACGRVEQALQYFNAMVENGHAV 520
Query: 1489 TFARLTALLN 1518
+ R +LL+
Sbjct: 521 SGKRCESLLH 530
>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
Length = 460
Score = 157 bits (396), Expect = 1e-38
Identities = 111/371 (29%), Positives = 183/371 (49%)
Frame = +1
Query: 367 HELLIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRH 546
+ LI LC+ G+ EA KLF ++ ++ D +Y L+ LC+AG+ D A +
Sbjct: 54 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKP--DVVTYNTLIDGLCKAGKLDEALKLFEE 111
Query: 547 MKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSRE 726
M + G DV TYN LI +A +A +EM K PDV T+++LI GLCK+ +
Sbjct: 112 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 171
Query: 727 FEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIE 906
+EA LF ++ G+ DV V +ST I LC GK++
Sbjct: 172 LDEALKLFEEMVEK----GIKPDV-------------------VTYSTLIDGLCKAGKLD 208
Query: 907 EADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLV 1086
EA L ++M++KG P + I CK+G++D+AL+ + + I N L+
Sbjct: 209 EALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLI 268
Query: 1087 HGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGE 1266
GLC+A K D+A+ LF++++ G N L+ L + G++ +A ++ E +++K
Sbjct: 269 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-- 326
Query: 1267 CVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVC 1446
+ +V T+N L+ LC + EA+ F+ + K + +Y L G G+
Sbjct: 327 -IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 385
Query: 1447 HELLKEMIELG 1479
+L +EM+E G
Sbjct: 386 LKLFEEMVEKG 396
Score = 155 bits (392), Expect = 4e-38
Identities = 121/446 (27%), Positives = 212/446 (47%), Gaps = 7/446 (1%)
Frame = +1
Query: 157 SKLDSVSLLIMNDGLFRLKKLGRMKALLSELWRRDDLSRAFMSDIVLN--CALGELSDIQ 330
S+LD + + L R + R L +EL R+ + +++ C G+L +
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 331 ELWRELSESDFDHEL-----LIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQ 495
+L+ E+ E ++ LI LC+ G+ EA KLF ++ ++ D +Y L+
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP--DVVTYNTLID 129
Query: 496 ALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIP 675
LC+AG+ D A + M + G DV TYN LI +A +A +EM K P
Sbjct: 130 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 189
Query: 676 DVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKP 855
DV T+ +LI GLCK+ + +EA LF ++ + G +P
Sbjct: 190 DVVTYSTLIDGLCKAGKLDEALKLFEEMV----------EKGIKPNV------------- 226
Query: 856 VAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLP 1035
V +ST I LC GK++EA L ++M++KG P + I CK+G++D+AL+
Sbjct: 227 VTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEE 286
Query: 1036 LKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGR 1215
+ + I + L+ GLC+A K D+A+ LF++++ G N L+ L + G+
Sbjct: 287 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 346
Query: 1216 IADANEIVENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKES 1395
+ +A ++ E +++K + +V T+N L+ LC + EA+ F+ + K ++ +
Sbjct: 347 LDEALKLFEEMVEKG---IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELT 403
Query: 1396 YRILFSGSLSMGQYKVCHELLKEMIE 1473
YR + +++ L E+ E
Sbjct: 404 YRRVVESYCRAKRFEEARGFLSEVSE 429
Score = 143 bits (361), Expect = 8e-34
Identities = 107/358 (29%), Positives = 179/358 (50%), Gaps = 17/358 (4%)
Frame = +1
Query: 457 SSLDERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAE 636
S LD R+Y ++ AL AG+ + A + +++ G + V TYN LI +A +A
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 637 IYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRT 816
+EM K PDV T+++LI GLCK+ + +EA LF ++ G+ DV T T
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE----KGIKPDVVTY-NT 126
Query: 817 LL-------QLD-----FRTQV-----PKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKG 945
L+ +LD F V P V ++T I LC GK++EA L ++M++KG
Sbjct: 127 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 186
Query: 946 WIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAM 1125
P + I CK+G++D+AL+ + + I N L+ GLC+A K D+A+
Sbjct: 187 IKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEAL 246
Query: 1126 DLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGECVIMNVTTHNVLL 1305
LF++++ G N L+ L + G++ +A ++ E +++K + +V T+N L+
Sbjct: 247 KLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG---IKPDVVTYNTLI 303
Query: 1306 KILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIELG 1479
LC + EA+ F+ + K + +Y L G G+ +L +EM+E G
Sbjct: 304 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 361
>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
Length = 460
Score = 154 bits (389), Expect = 1e-37
Identities = 120/446 (26%), Positives = 213/446 (47%), Gaps = 7/446 (1%)
Frame = +1
Query: 157 SKLDSVSLLIMNDGLFRLKKLGRMKALLSELWRRDDLSRAFMSDIVLN--CALGELSDIQ 330
S+LD + + L R + R L +EL R+ + +++ C G+L +
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 331 ELWRELSESDFDHEL-----LIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQ 495
+L+ E+ E ++ LI LC+ G+ EA KLF ++ ++ D +Y L+
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP--DVVTYNTLID 129
Query: 496 ALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIP 675
LC+AG+ D A + M + G DV TYN LI +A +A +EM K P
Sbjct: 130 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 189
Query: 676 DVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKP 855
DV T+++LI GLCK+ + +EA LF ++ + G +P
Sbjct: 190 DVVTYNTLIDGLCKAGKLDEALKLFEEMV----------EKGIKPSV------------- 226
Query: 856 VAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLP 1035
V ++T I LC GK++EA L ++M++KG P + I CK+G++D+AL+
Sbjct: 227 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEE 286
Query: 1036 LKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGR 1215
+ + I + L+ GLC+A K D+A+ LF++++ G N L+ L + G+
Sbjct: 287 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 346
Query: 1216 IADANEIVENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKES 1395
+ +A ++ E +++K + +V T+N L+ LC + EA+ F+ + K ++ +
Sbjct: 347 LDEALKLFEEMVEKG---IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELT 403
Query: 1396 YRILFSGSLSMGQYKVCHELLKEMIE 1473
YR + +++ L E+ E
Sbjct: 404 YRRVVESYCRAKRFEEARGFLSEVSE 429
Score = 154 bits (389), Expect = 1e-37
Identities = 109/371 (29%), Positives = 183/371 (49%)
Frame = +1
Query: 367 HELLIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRH 546
+ LI LC+ G+ EA KLF ++ ++ D +Y L+ LC+AG+ D A +
Sbjct: 54 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKP--DVVTYNTLIDGLCKAGKLDEALKLFEE 111
Query: 547 MKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSRE 726
M + G DV TYN LI +A +A +EM K PDV T+++LI GLCK+ +
Sbjct: 112 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 171
Query: 727 FEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIE 906
+EA LF ++ G+ DV V ++T I LC GK++
Sbjct: 172 LDEALKLFEEMVE----KGIKPDV-------------------VTYNTLIDGLCKAGKLD 208
Query: 907 EADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLV 1086
EA L ++M++KG P + I CK+G++D+AL+ + + I + L+
Sbjct: 209 EALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLI 268
Query: 1087 HGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGE 1266
GLC+A K D+A+ LF++++ G N L+ L + G++ +A ++ E +++K
Sbjct: 269 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-- 326
Query: 1267 CVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVC 1446
+ +V T+N L+ LC + EA+ F+ + K + +Y L G G+
Sbjct: 327 -IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 385
Query: 1447 HELLKEMIELG 1479
+L +EM+E G
Sbjct: 386 LKLFEEMVEKG 396
Score = 142 bits (357), Expect = 3e-33
Identities = 106/358 (29%), Positives = 179/358 (50%), Gaps = 17/358 (4%)
Frame = +1
Query: 457 SSLDERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAE 636
S LD R+Y ++ AL AG+ + A + +++ G + V TYN LI +A +A
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 637 IYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRT 816
+EM K PDV T+++LI GLCK+ + +EA LF ++ G+ DV T T
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE----KGIKPDVVTY-NT 126
Query: 817 LL-------QLD-----FRTQV-----PKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKG 945
L+ +LD F V P V ++T I LC GK++EA L ++M++KG
Sbjct: 127 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 186
Query: 946 WIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAM 1125
P + I CK+G++D+AL+ + + I + L+ GLC+A K D+A+
Sbjct: 187 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEAL 246
Query: 1126 DLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGECVIMNVTTHNVLL 1305
LF++++ G N L+ L + G++ +A ++ E +++K + +V T+N L+
Sbjct: 247 KLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG---IKPDVVTYNTLI 303
Query: 1306 KILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIELG 1479
LC + EA+ F+ + K + +Y L G G+ +L +EM+E G
Sbjct: 304 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 361
>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U10 In Complex With Its Target Rna U10
Length = 460
Score = 154 bits (388), Expect = 1e-37
Identities = 121/446 (27%), Positives = 213/446 (47%), Gaps = 7/446 (1%)
Frame = +1
Query: 157 SKLDSVSLLIMNDGLFRLKKLGRMKALLSELWRRDDLSRAFMSDIVLN--CALGELSDIQ 330
S+LD + + L R + R L +EL R+ + +++ C G+L +
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 331 ELWRELSESDFDHEL-----LIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQ 495
+L+ E+ E ++ LI LC+ G+ EA KLF ++ ++ D +Y L+
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP--DVVTYNTLID 129
Query: 496 ALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIP 675
LC+AG+ D A + M + G DV TYN LI +A +A +EM K P
Sbjct: 130 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 189
Query: 676 DVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKP 855
DV T+++LI GLCK+ + +EA LF ++ G+ DV
Sbjct: 190 DVVTYNTLIDGLCKAGKLDEALKLFEEMVEK----GIKPDV------------------- 226
Query: 856 VAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLP 1035
V ++T I LC GK++EA L ++M++KG P + I CK+G++D+AL+
Sbjct: 227 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 286
Query: 1036 LKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGR 1215
+ + I + L+ GLC+A K D+A+ LF++++ G N L+ L + G+
Sbjct: 287 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 346
Query: 1216 IADANEIVENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKES 1395
+ +A ++ E +++K + +V T+N L+ LC + EA+ F+ + K ++ +
Sbjct: 347 LDEALKLFEEMVEKG---IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELT 403
Query: 1396 YRILFSGSLSMGQYKVCHELLKEMIE 1473
YR + +++ L E+ E
Sbjct: 404 YRRVVESYCRAKRFEEARGFLSEVSE 429
Score = 154 bits (388), Expect = 1e-37
Identities = 109/371 (29%), Positives = 183/371 (49%)
Frame = +1
Query: 367 HELLIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRH 546
+ LI LC+ G+ EA KLF ++ ++ D +Y L+ LC+AG+ D A +
Sbjct: 54 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKP--DVVTYNTLIDGLCKAGKLDEALKLFEE 111
Query: 547 MKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSRE 726
M + G DV TYN LI +A +A +EM K PDV T+++LI GLCK+ +
Sbjct: 112 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 171
Query: 727 FEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIE 906
+EA LF ++ G+ DV V ++T I LC GK++
Sbjct: 172 LDEALKLFEEMVE----KGIKPDV-------------------VTYNTLIDGLCKAGKLD 208
Query: 907 EADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLV 1086
EA L ++M++KG P + I CK+G++D+AL+ + + I + L+
Sbjct: 209 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 268
Query: 1087 HGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGE 1266
GLC+A K D+A+ LF++++ G N L+ L + G++ +A ++ E +++K
Sbjct: 269 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-- 326
Query: 1267 CVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVC 1446
+ +V T+N L+ LC + EA+ F+ + K + +Y L G G+
Sbjct: 327 -IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 385
Query: 1447 HELLKEMIELG 1479
+L +EM+E G
Sbjct: 386 LKLFEEMVEKG 396
Score = 142 bits (357), Expect = 3e-33
Identities = 106/358 (29%), Positives = 179/358 (50%), Gaps = 17/358 (4%)
Frame = +1
Query: 457 SSLDERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAE 636
S LD R+Y ++ AL AG+ + A + +++ G + V TYN LI +A +A
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 637 IYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRT 816
+EM K PDV T+++LI GLCK+ + +EA LF ++ G+ DV T T
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE----KGIKPDVVTY-NT 126
Query: 817 LL-------QLD-----FRTQV-----PKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKG 945
L+ +LD F V P V ++T I LC GK++EA L ++M++KG
Sbjct: 127 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 186
Query: 946 WIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAM 1125
P + I CK+G++D+AL+ + + I + L+ GLC+A K D+A+
Sbjct: 187 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL 246
Query: 1126 DLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGECVIMNVTTHNVLL 1305
LF++++ G N L+ L + G++ +A ++ E +++K + +V T+N L+
Sbjct: 247 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG---IKPDVVTYNTLI 303
Query: 1306 KILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIELG 1479
LC + EA+ F+ + K + +Y L G G+ +L +EM+E G
Sbjct: 304 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 361
>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
Length = 460
Score = 153 bits (387), Expect = 2e-37
Identities = 109/371 (29%), Positives = 183/371 (49%)
Frame = +1
Query: 367 HELLIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRH 546
+ LI LC+ G+ EA KLF ++ ++ D +Y L+ LC+AG+ D A +
Sbjct: 54 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKP--DVVTYNTLIDGLCKAGKLDEALKLFEE 111
Query: 547 MKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSRE 726
M + G DV TYN LI +A +A +EM K PDV T+++LI GLCK+ +
Sbjct: 112 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 171
Query: 727 FEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIE 906
+EA LF ++ G+ DV V ++T I LC GK++
Sbjct: 172 LDEALKLFEEMVE----KGIKPDV-------------------VTYTTLIDGLCKAGKLD 208
Query: 907 EADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLV 1086
EA L ++M++KG P + I CK+G++D+AL+ + + I + L+
Sbjct: 209 EALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 268
Query: 1087 HGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGE 1266
GLC+A K D+A+ LF++++ G N L+ L + G++ +A ++ E +++K
Sbjct: 269 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-- 326
Query: 1267 CVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVC 1446
+ +V T+N L+ LC + EA+ F+ + K + +Y L G G+
Sbjct: 327 -IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 385
Query: 1447 HELLKEMIELG 1479
+L +EM+E G
Sbjct: 386 LKLFEEMVEKG 396
Score = 153 bits (386), Expect = 3e-37
Identities = 121/446 (27%), Positives = 212/446 (47%), Gaps = 7/446 (1%)
Frame = +1
Query: 157 SKLDSVSLLIMNDGLFRLKKLGRMKALLSELWRRDDLSRAFMSDIVLN--CALGELSDIQ 330
S+LD + + L R + R L +EL R+ + +++ C G+L +
Sbjct: 12 SRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL 71
Query: 331 ELWRELSESDFDHEL-----LIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQ 495
+L+ E+ E ++ LI LC+ G+ EA KLF ++ ++ D +Y L+
Sbjct: 72 KLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP--DVVTYNTLID 129
Query: 496 ALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIP 675
LC+AG+ D A + M + G DV TYN LI +A +A +EM K P
Sbjct: 130 GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKP 189
Query: 676 DVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKP 855
DV T+ +LI GLCK+ + +EA LF ++ G+ DV
Sbjct: 190 DVVTYTTLIDGLCKAGKLDEALKLFEEMVEK----GIKPDV------------------- 226
Query: 856 VAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLP 1035
V ++T I LC GK++EA L ++M++KG P + I CK+G++D+AL+
Sbjct: 227 VTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 286
Query: 1036 LKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGR 1215
+ + I + L+ GLC+A K D+A+ LF++++ G N L+ L + G+
Sbjct: 287 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 346
Query: 1216 IADANEIVENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKES 1395
+ +A ++ E +++K + +V T+N L+ LC + EA+ F+ + K ++ +
Sbjct: 347 LDEALKLFEEMVEKG---IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELT 403
Query: 1396 YRILFSGSLSMGQYKVCHELLKEMIE 1473
YR + +++ L E+ E
Sbjct: 404 YRRVVESYCRAKRFEEARGFLSEVSE 429
Score = 142 bits (359), Expect = 1e-33
Identities = 98/335 (29%), Positives = 165/335 (49%)
Frame = +1
Query: 475 SYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEM 654
+Y L+ LC+AG+ D A + M + G DV TYN LI +A +A +EM
Sbjct: 53 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 112
Query: 655 FIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDF 834
K PDV T+++LI GLCK+ + +EA LF ++ G+ DV
Sbjct: 113 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK----GIKPDV------------ 156
Query: 835 RTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDK 1014
V ++T I LC GK++EA L ++M++KG P + I CK+G++D+
Sbjct: 157 -------VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDE 209
Query: 1015 ALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLH 1194
AL+ + + I + L+ GLC+A K D+A+ LF++++ G N L+
Sbjct: 210 ALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 269
Query: 1195 SLIEVGRIADANEIVENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKK 1374
L + G++ +A ++ E +++K + +V T+N L+ LC + EA+ F+ + K
Sbjct: 270 GLCKAGKLDEALKLFEEMVEKG---IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 326
Query: 1375 GLCNKESYRILFSGSLSMGQYKVCHELLKEMIELG 1479
+ +Y L G G+ +L +EM+E G
Sbjct: 327 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 361
Score = 97.1 bits (240), Expect = 7e-18
Identities = 69/268 (25%), Positives = 126/268 (47%)
Frame = +1
Query: 676 DVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKP 855
DV + +++ L ++ +E A LF +L GV P
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAEL----RRQGV-------------------APTV 51
Query: 856 VAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLP 1035
V ++T I LC GK++EA L ++M++KG P + I CK+G++D+AL+
Sbjct: 52 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 111
Query: 1036 LKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGR 1215
+ + I + L+ GLC+A K D+A+ LF++++ G N L+ L + G+
Sbjct: 112 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 171
Query: 1216 IADANEIVENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKES 1395
+ +A ++ E +++K + +V T+ L+ LC + EA+ F+ + K + +
Sbjct: 172 LDEALKLFEEMVEKG---IKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 228
Query: 1396 YRILFSGSLSMGQYKVCHELLKEMIELG 1479
Y L G G+ +L +EM+E G
Sbjct: 229 YTTLIDGLCKAGKLDEALKLFEEMVEKG 256
Score = 85.9 bits (211), Expect = 3e-14
Identities = 56/220 (25%), Positives = 109/220 (49%)
Frame = +1
Query: 859 AFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPL 1038
A++T + +L G+ E A +L ++ ++G P + I CK+G++D+AL+ +
Sbjct: 18 AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEM 77
Query: 1039 KKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRI 1218
+ I + L+ GLC+A K D+A+ LF++++ G N L+ L + G++
Sbjct: 78 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137
Query: 1219 ADANEIVENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESY 1398
+A ++ E +++K + +V T+N L+ LC + EA+ F+ + K + +Y
Sbjct: 138 DEALKLFEEMVEKG---IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 194
Query: 1399 RILFSGSLSMGQYKVCHELLKEMIELGHISTFARLTALLN 1518
L G G+ +L +EM+E G T L++
Sbjct: 195 TTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLID 234
>XP_020102032.1 pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Ananas comosus]
Length = 478
Score = 148 bits (373), Expect = 2e-35
Identities = 117/470 (24%), Positives = 222/470 (47%), Gaps = 18/470 (3%)
Frame = +1
Query: 163 LDSVSLLIMNDGLFRLKKLGRMKALLSELWRRDDLSRAFMSDIVLNCA--LGELSDIQEL 336
LD + L++ L + +KL R K LLS L R + F+ +VL C LG + DI+ +
Sbjct: 8 LDPATSLLVLRRLAQWRKLVRAKTLLSALSARSAVPVPFLYSLVLQCLVPLGPIRDIELV 67
Query: 337 WRELSESD----FDHELLIMYLCE-NGEALEAFKLFNLVINSELQSSLDERSYVVLVQAL 501
W E+ + F+ +++L + A E +F V S +S L R+Y L+ AL
Sbjct: 68 WSEVVKDPPHKPFNASDFVVHLARRSANAAEIEGVFRRV--SSTRSGLTPRAYSALIGAL 125
Query: 502 CEAGQADSA--NNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFI-KCHI 672
C+ + +V+R M++ G+ D TY L + N +A+ + + K +
Sbjct: 126 CKGENPNPVLGRHVLREMEEKGFEADELTYIALFRSFCRIGNPLEADSILRILVERKKYK 185
Query: 673 PDVWTFDSLIRGLCKSREFEEANNLFIKL-------TANKNMSGVYYDVGTRPRTLLQLD 831
DV + + GLCKS + EA LF K+ TAN + V + R + QL
Sbjct: 186 ADVLIYGDFLYGLCKSGKLREARKLFDKMSKKDRSFTANTEVVPV---LKPGRRVIFQLG 242
Query: 832 FRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVD 1011
V + +AF Y ++LCG G++EEA+ LLK + + +P ++ +F+ A +G V+
Sbjct: 243 SPHPVSEKMAFEAYFRALCGTGRVEEAERLLKDRVMQNTVPDVCVYASFVEALFDAGRVE 302
Query: 1012 KALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALL 1191
A+ F K + + + + + L+ GLC + + + L ++++ A + N ++
Sbjct: 303 DAMNFFEAHKNKRGIDGKGIAVALIMGLCNVGRAGEGLQLLYEIVDGRFFPTARVWNRIV 362
Query: 1192 HSLIEVGRIADANEIVENIMK-KNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKT 1368
E GR+ DA + + + + K G+ + +T+ +++ L ++ + A++ +
Sbjct: 363 ERFCEEGRVHDAQNLFDELRRGKCGDFARPDSSTYELMIFGLLNKGDTTAAIALLDEMTK 422
Query: 1369 KKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIELGHISTFARLTALLN 1518
KK + Y + G + ++ L MIE G +++++ L++
Sbjct: 423 KKIRADVRLYSAIVRRLYEDGAIEESNKYLNRMIENGILASYSAWEGLVD 472
>XP_010540380.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62590-like
isoform X2 [Tarenaya hassleriana]
Length = 513
Score = 142 bits (357), Expect = 6e-33
Identities = 96/383 (25%), Positives = 167/383 (43%)
Frame = +1
Query: 367 HELLIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRH 546
+ +++ +C+ G++ A L + E +D +Y ++ LC+ G D A ++
Sbjct: 82 YNVVVNGICKLGDSALALNLIKKM--EERTIEVDVVTYTTIIDCLCKVGNIDDALDIFSK 139
Query: 547 MKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSRE 726
M G + DV TYN LI C W DA K M + PDV TF LI K
Sbjct: 140 MDDRGIAPDVITYNTLINCLCSYGRWNDASQLLKGMTSRKITPDVVTFTGLIDNFIKEER 199
Query: 727 FEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIE 906
F EA +L++++ G P T +++ I C +++
Sbjct: 200 FAEAKDLYMEMIQR----------GLNPDTF-------------TYTSLIDGFCMQNRLD 236
Query: 907 EADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLV 1086
EA ++ M+ KG P + +CKSG +D+A+E + + +++ + L+
Sbjct: 237 EAKEMFDYMISKGCFPNVVTCNVLVNGYCKSGRIDEAMELFSEMSRRRVIPDTNTYTSLI 296
Query: 1087 HGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGE 1266
G C A K D A LF ++ G + + L L + G++ +A E+ M+K+G
Sbjct: 297 QGFCRAGKLDVAETLFVEMQRHGPCLDLVTYSVFLDGLCKNGKLEEALELYYE-MEKSG- 354
Query: 1267 CVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVC 1446
+ +N+ HN ++ LC V EA+ F ++ K N +Y I+ G S G
Sbjct: 355 -MDLNIVPHNSIIHGLCKAEKVDEAVGLFVKLFDKGVEPNVRTYNIMIFGLCSKGLLDEA 413
Query: 1447 HELLKEMIELGHISTFARLTALL 1515
+L ++M E G + + L+
Sbjct: 414 QKLFRDMKEAGCLPSDCTFNTLI 436
Score = 86.3 bits (212), Expect = 3e-14
Identities = 70/317 (22%), Positives = 129/317 (40%)
Frame = +1
Query: 517 ADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDS 696
+D A +++ M +G+ DV T+ +++ Y+A I M + P+ T++
Sbjct: 25 SDKALDLMERMVDVGHKPDVVTFTTVVKGLFLEGRVYEAGILVDRMAERGCQPNTVTYNV 84
Query: 697 LIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYI 876
++ G+CK + A NL K ++ RT V ++T I
Sbjct: 85 VVNGICKLGDSALALNLIKK-----------------------MEERTIEVDVVTYTTII 121
Query: 877 KSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKIL 1056
LC +G I++A D+ KM +G P + I C G + A + + KI
Sbjct: 122 DCLCKVGNIDDALDIFSKMDDRGIAPDVITYNTLINCLCSYGRWNDASQLLKGMTSRKIT 181
Query: 1057 SNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEI 1236
+ L+ + ++ +A DL+ +++ G +L+ R+ +A E+
Sbjct: 182 PDVVTFTGLIDNFIKEERFAEAKDLYMEMIQRGLNPDTFTYTSLIDGFCMQNRLDEAKEM 241
Query: 1237 VENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSG 1416
+ ++ K NV T NVL+ C + EAM F + ++ + + +Y L G
Sbjct: 242 FDYMISKG---CFPNVVTCNVLVNGYCKSGRIDEAMELFSEMSRRRVIPDTNTYTSLIQG 298
Query: 1417 SLSMGQYKVCHELLKEM 1467
G+ V L EM
Sbjct: 299 FCRAGKLDVAETLFVEM 315
Score = 84.3 bits (207), Expect = 1e-13
Identities = 89/398 (22%), Positives = 164/398 (41%), Gaps = 16/398 (4%)
Frame = +1
Query: 208 LKKLGRMKALLSELWRRDDLSRAFMSDIVLN-------CALGELSDIQELWRELSESDFD 366
L K+G + L + DD R D++ C+ G +D +L + ++
Sbjct: 124 LCKVGNIDDALDIFSKMDD--RGIAPDVITYNTLINCLCSYGRWNDASQLLKGMTSRKIT 181
Query: 367 HEL-----LIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSAN 531
++ LI + EA L+ +I L D +Y L+ C + D A
Sbjct: 182 PDVVTFTGLIDNFIKEERFAEAKDLYMEMIQRGLNP--DTFTYTSLIDGFCMQNRLDEAK 239
Query: 532 NVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGL 711
+ +M G +V T N L+ ++ +A EM + IPD T+ SLI+G
Sbjct: 240 EMFDYMISKGCFPNVVTCNVLVNGYCKSGRIDEAMELFSEMSRRRVIPDTNTYTSLIQGF 299
Query: 712 CKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCG 891
C++ + + A LF+++ + G D+ V +S ++ LC
Sbjct: 300 CRAGKLDVAETLFVEMQRH----GPCLDL-------------------VTYSVFLDGLCK 336
Query: 892 IGKIEEADDLLKKMLQKGW----IPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILS 1059
GK+EEA +L +M + G +P N I I CK+ +VD+A+ + L +
Sbjct: 337 NGKLEEALELYYEMEKSGMDLNIVPHNSI----IHGLCKAEKVDEAVGLFVKLFDKGVEP 392
Query: 1060 NRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIV 1239
N ++ GLC D+A LF+ + G + N L+ + G ++E+V
Sbjct: 393 NVRTYNIMIFGLCSKGLLDEAQKLFRDMKEAGCLPSDCTFNTLIRGHLRNG---SSSEVV 449
Query: 1240 ENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHF 1353
E + + + + + ++++ ++ D R E + F
Sbjct: 450 ELVREMKSRGFLPDASIMSLIIDMVYDGRLDKEFLDQF 487
Score = 64.3 bits (155), Expect = 3e-07
Identities = 48/224 (21%), Positives = 91/224 (40%)
Frame = +1
Query: 847 PKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEF 1026
P V F+T +K L G++ EA L+ +M ++G P + + CK G+ AL
Sbjct: 42 PDVVTFTTVVKGLFLEGRVYEAGILVDRMAERGCQPNTVTYNVVVNGICKLGDSALALNL 101
Query: 1027 CLPLKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIE 1206
+++ I + ++ LC+ D A+D+F K+ + G N L++ L
Sbjct: 102 IKKMEERTIEVDVVTYTTIIDCLCKVGNIDDALDIFSKMDDRGIAPDVITYNTLINCLCS 161
Query: 1207 VGRIADANEIVENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCN 1386
GR DA+++++ + + + +V T L+ + EA + + + +
Sbjct: 162 YGRWNDASQLLKGMTSRK---ITPDVVTFTGLIDNFIKEERFAEAKDLYMEMIQRGLNPD 218
Query: 1387 KESYRILFSGSLSMGQYKVCHELLKEMIELGHISTFARLTALLN 1518
+Y L G + E+ MI G L+N
Sbjct: 219 TFTYTSLIDGFCMQNRLDEAKEMFDYMISKGCFPNVVTCNVLVN 262
>XP_010540379.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like
isoform X1 [Tarenaya hassleriana]
Length = 617
Score = 142 bits (357), Expect = 2e-32
Identities = 96/383 (25%), Positives = 167/383 (43%)
Frame = +1
Query: 367 HELLIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSANNVVRH 546
+ +++ +C+ G++ A L + E +D +Y ++ LC+ G D A ++
Sbjct: 186 YNVVVNGICKLGDSALALNLIKKM--EERTIEVDVVTYTTIIDCLCKVGNIDDALDIFSK 243
Query: 547 MKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSRE 726
M G + DV TYN LI C W DA K M + PDV TF LI K
Sbjct: 244 MDDRGIAPDVITYNTLINCLCSYGRWNDASQLLKGMTSRKITPDVVTFTGLIDNFIKEER 303
Query: 727 FEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIE 906
F EA +L++++ G P T +++ I C +++
Sbjct: 304 FAEAKDLYMEMIQR----------GLNPDTF-------------TYTSLIDGFCMQNRLD 340
Query: 907 EADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLV 1086
EA ++ M+ KG P + +CKSG +D+A+E + + +++ + L+
Sbjct: 341 EAKEMFDYMISKGCFPNVVTCNVLVNGYCKSGRIDEAMELFSEMSRRRVIPDTNTYTSLI 400
Query: 1087 HGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGE 1266
G C A K D A LF ++ G + + L L + G++ +A E+ M+K+G
Sbjct: 401 QGFCRAGKLDVAETLFVEMQRHGPCLDLVTYSVFLDGLCKNGKLEEALELYYE-MEKSG- 458
Query: 1267 CVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVC 1446
+ +N+ HN ++ LC V EA+ F ++ K N +Y I+ G S G
Sbjct: 459 -MDLNIVPHNSIIHGLCKAEKVDEAVGLFVKLFDKGVEPNVRTYNIMIFGLCSKGLLDEA 517
Query: 1447 HELLKEMIELGHISTFARLTALL 1515
+L ++M E G + + L+
Sbjct: 518 QKLFRDMKEAGCLPSDCTFNTLI 540
Score = 89.4 bits (220), Expect = 4e-15
Identities = 84/367 (22%), Positives = 153/367 (41%), Gaps = 2/367 (0%)
Frame = +1
Query: 424 LFNLVINSE-LQSSLDERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQ 600
LF+ ++ S L S++D + L+ A+ + + D A + + M+ LG S D+ T N +I
Sbjct: 30 LFHQMLQSRPLPSTID---FNKLLSAIVKMKRFDIAIFLCKRMELLGVSRDLYTLNIMIN 86
Query: 601 C-CAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTANKNM 777
C C ++ K M + + PDV TF++LI G C + A +L ++
Sbjct: 87 CFCRSCQVVLGFSVFGKIMKLG-YDPDVVTFNTLINGFCIGGQISAALDLMERMV----- 140
Query: 778 SGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPG 957
DVG +P V F+T +K L G++ EA L+ +M ++G P
Sbjct: 141 -----DVGHKPDV-------------VTFTTVVKGLFLEGRVYEAGILVDRMAERGCQPN 182
Query: 958 NDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFK 1137
+ + CK G+ AL +++ I + ++ LC+ D A+D+F
Sbjct: 183 TVTYNVVVNGICKLGDSALALNLIKKMEERTIEVDVVTYTTIIDCLCKVGNIDDALDIFS 242
Query: 1138 KLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIMKKNGECVIMNVTTHNVLLKILC 1317
K+ + G N L++ L GR DA+++++ + + + +V T L+
Sbjct: 243 KMDDRGIAPDVITYNTLINCLCSYGRWNDASQLLKGMTSRK---ITPDVVTFTGLIDNFI 299
Query: 1318 DQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIELGHISTFA 1497
+ EA + + + + +Y L G + E+ MI G
Sbjct: 300 KEERFAEAKDLYMEMIQRGLNPDTFTYTSLIDGFCMQNRLDEAKEMFDYMISKGCFPNVV 359
Query: 1498 RLTALLN 1518
L+N
Sbjct: 360 TCNVLVN 366
Score = 84.3 bits (207), Expect = 2e-13
Identities = 89/398 (22%), Positives = 164/398 (41%), Gaps = 16/398 (4%)
Frame = +1
Query: 208 LKKLGRMKALLSELWRRDDLSRAFMSDIVLN-------CALGELSDIQELWRELSESDFD 366
L K+G + L + DD R D++ C+ G +D +L + ++
Sbjct: 228 LCKVGNIDDALDIFSKMDD--RGIAPDVITYNTLINCLCSYGRWNDASQLLKGMTSRKIT 285
Query: 367 HEL-----LIMYLCENGEALEAFKLFNLVINSELQSSLDERSYVVLVQALCEAGQADSAN 531
++ LI + EA L+ +I L D +Y L+ C + D A
Sbjct: 286 PDVVTFTGLIDNFIKEERFAEAKDLYMEMIQRGLNP--DTFTYTSLIDGFCMQNRLDEAK 343
Query: 532 NVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGL 711
+ +M G +V T N L+ ++ +A EM + IPD T+ SLI+G
Sbjct: 344 EMFDYMISKGCFPNVVTCNVLVNGYCKSGRIDEAMELFSEMSRRRVIPDTNTYTSLIQGF 403
Query: 712 CKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQLDFRTQVPKPVAFSTYIKSLCG 891
C++ + + A LF+++ + G D+ V +S ++ LC
Sbjct: 404 CRAGKLDVAETLFVEMQRH----GPCLDL-------------------VTYSVFLDGLCK 440
Query: 892 IGKIEEADDLLKKMLQKGW----IPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILS 1059
GK+EEA +L +M + G +P N I I CK+ +VD+A+ + L +
Sbjct: 441 NGKLEEALELYYEMEKSGMDLNIVPHNSI----IHGLCKAEKVDEAVGLFVKLFDKGVEP 496
Query: 1060 NRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIV 1239
N ++ GLC D+A LF+ + G + N L+ + G ++E+V
Sbjct: 497 NVRTYNIMIFGLCSKGLLDEAQKLFRDMKEAGCLPSDCTFNTLIRGHLRNG---SSSEVV 553
Query: 1240 ENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHF 1353
E + + + + + ++++ ++ D R E + F
Sbjct: 554 ELVREMKSRGFLPDASIMSLIIDMVYDGRLDKEFLDQF 591
>XP_010520854.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like isoform X2 [Tarenaya hassleriana]
Length = 638
Score = 140 bits (352), Expect = 9e-32
Identities = 107/410 (26%), Positives = 177/410 (43%), Gaps = 5/410 (1%)
Frame = +1
Query: 301 CALGELSDIQELWRELSE-----SDFDHELLIMYLCENGEALEAFKLFNLVINSELQSSL 465
C G + + L + E + F + ++ +C+ G++ A L + E + +
Sbjct: 206 CLKGRIHEAVSLTERMVEKGCHPNTFTYNTILNGICKIGDSALALDLVKKM--EERCTVV 263
Query: 466 DERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEAANWYDAEIYA 645
D +Y ++ LC++G D A V M G DV +YN LI W DA
Sbjct: 264 DVVTYNTIIDCLCKSGNIDDALGVFSKMDDRGVVSDVISYNTLINGLCSLGRWNDALRLL 323
Query: 646 KEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKLTANKNMSGVYYDVGTRPRTLLQ 825
K+M + +PDV TF+ LI K F EA L+ +LQ
Sbjct: 324 KDMMRRKIMPDVVTFNGLIDKFIKEGMFLEAKELY--------------------EQMLQ 363
Query: 826 LDFRTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGE 1005
R VP V +++ I C +++EA + M+ KG P + A I +CKSG
Sbjct: 364 ---RGLVPNTVTYNSLIDGFCMQNRLDEARQVFDSMVTKGCFPNVVTFGALINGYCKSGR 420
Query: 1006 VDKALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNA 1185
VDK LE + + + +N + L+ G C+A D A LF ++ G
Sbjct: 421 VDKGLELLSEMSQRGVTANNIIYNSLIQGFCQAGNIDAAQTLFFEMQRRGPHPDLITHTI 480
Query: 1186 LLHSLIEVGRIADANEIVENIMKKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIK 1365
LL L + G++ +A E+ + M+K+G + +N+ H V++ +C + + EA+ F +
Sbjct: 481 LLDGLCKNGKLEEALELYDK-MEKDG--MSLNIVVHTVIIHGMCKAKKIDEALQLFNLLS 537
Query: 1366 TKKGLCNKESYRILFSGSLSMGQYKVCHELLKEMIELGHISTFARLTALL 1515
K N +Y ++ SG G + +L EM E G + AL+
Sbjct: 538 DKGVEPNVITYNMMISGLCWRGLFGEAEKLFSEMKETGCMPNDRTYNALI 587
Score = 81.3 bits (199), Expect = 2e-12
Identities = 84/405 (20%), Positives = 163/405 (40%), Gaps = 55/405 (13%)
Frame = +1
Query: 277 FMSDIVLN--CALGELSDIQELWRELSE-----SDFDHELLIMYLCENGEALEAFKLFNL 435
F + +LN C +G+ + +L +++ E + +I LC++G +A +F+
Sbjct: 231 FTYNTILNGICKIGDSALALDLVKKMEERCTVVDVVTYNTIIDCLCKSGNIDDALGVFSK 290
Query: 436 VINSELQSSLDERSYVVLVQALCEAGQADSANNVVRHMKKLGYSMDVTTYNKLIQCCAEA 615
+ + + S D SY L+ LC G+ + A +++ M + DV T+N LI +
Sbjct: 291 MDDRGVVS--DVISYNTLINGLCSLGRWNDALRLLKDMMRRKIMPDVVTFNGLIDKFIKE 348
Query: 616 ANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLF--------------- 750
+ +A+ ++M + +P+ T++SLI G C +EA +F
Sbjct: 349 GMFLEAKELYEQMLQRGLVPNTVTYNSLIDGFCMQNRLDEARQVFDSMVTKGCFPNVVTF 408
Query: 751 ----------------IKLTANKNMSGVYYD----------------VGTRPRTLLQLDF 834
++L + + GV + + ++
Sbjct: 409 GALINGYCKSGRVDKGLELLSEMSQRGVTANNIIYNSLIQGFCQAGNIDAAQTLFFEMQR 468
Query: 835 RTQVPKPVAFSTYIKSLCGIGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDK 1014
R P + + + LC GK+EEA +L KM + G + I CK+ ++D+
Sbjct: 469 RGPHPDLITHTILLDGLCKNGKLEEALELYDKMEKDGMSLNIVVHTVIIHGMCKAKKIDE 528
Query: 1015 ALEFCLPLKKMKILSNRYMNICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLH 1194
AL+ L + N ++ GLC +A LF ++ G M NAL+
Sbjct: 529 ALQLFNLLSDKGVEPNVITYNMMISGLCWRGLFGEAEKLFSEMKETGCMPNDRTYNALIQ 588
Query: 1195 SLIEVGRIADANEIVENIMKKNGEC-VIMNVTTHNVLLKILCDQR 1326
++ G +++ K+ C + +T +++ +LCD R
Sbjct: 589 GYLKHGYTLKGIKLI----KEKKRCGFSADASTIKIVVDMLCDGR 629
Score = 77.8 bits (190), Expect = 2e-11
Identities = 63/329 (19%), Positives = 140/329 (42%), Gaps = 16/329 (4%)
Frame = +1
Query: 580 TYNKLIQCCAEAANWYDAEIYAKEMFIKCHIPDVWTFDSLIRGLCKSREFEEANNLFIKL 759
++ + ++C +N ++A +M +P + F+ L+ + K + ++ + I L
Sbjct: 57 SFRERLRCGFADSNVHEAVALFHQMVRSRPLPSIIDFNMLLSAIAKMKRYD----VVISL 112
Query: 760 TANKNMSGVYYDVGTRPRTLLQLDFRTQV----------------PKPVAFSTYIKSLCG 891
+ + GV +D+ T + Q P + F+T I C
Sbjct: 113 CKSMELVGVSHDLYTLSILINSFCRSRQAVLGFSVFGKIIKSGYEPDTITFNTLINGFCI 172
Query: 892 IGKIEEADDLLKKMLQKGWIPGNDIWRAFIAAFCKSGEVDKALEFCLPLKKMKILSNRYM 1071
+G+ A DL+++M++ G P + + FC G + +A+ + + N +
Sbjct: 173 LGEASVALDLMERMVEAGLQPDVVTFNTVVNGFCLKGRIHEAVSLTERMVEKGCHPNTFT 232
Query: 1072 NICLVHGLCEAKKCDQAMDLFKKLMNDGTMVPADICNALLHSLIEVGRIADANEIVENIM 1251
+++G+C+ A+DL KK+ T+V N ++ L + G I DA +
Sbjct: 233 YNTILNGICKIGDSALALDLVKKMEERCTVVDVVTYNTIIDCLCKSGNIDDALGV---FS 289
Query: 1252 KKNGECVIMNVTTHNVLLKILCDQRNVVEAMSHFQRIKTKKGLCNKESYRILFSGSLSMG 1431
K + V+ +V ++N L+ LC +A+ + + +K + + ++ L + G
Sbjct: 290 KMDDRGVVSDVISYNTLINGLCSLGRWNDALRLLKDMMRRKIMPDVVTFNGLIDKFIKEG 349
Query: 1432 QYKVCHELLKEMIELGHISTFARLTALLN 1518
+ EL ++M++ G + +L++
Sbjct: 350 MFLEAKELYEQMLQRGLVPNTVTYNSLID 378