BLASTX nr result

ID: Ephedra29_contig00008256 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00008256
         (1636 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ADE75839.1 unknown [Picea sitchensis]                                  62   1e-06

>ADE75839.1 unknown [Picea sitchensis]
          Length = 364

 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 90/323 (27%), Positives = 135/323 (41%), Gaps = 34/323 (10%)
 Frame = -1

Query: 994 LCIGPMTPLIVREKPRIPVSTITPLTEPNSSFSEKSDRGS---------TEKESSLSRSL 842
           L   P+TP   RE  R  V+ +TPLT  +SS + KSD G           EK +    S 
Sbjct: 63  LAEAPVTPFADRENARSSVTNLTPLTSISSS-TRKSDFGDFCYDEVIEWNEKVAEKPCS- 120

Query: 841 FSETPQK-IFDPFAPAGDEHYFAPRKPIRSRLDFNKCENEDGIGLPSEELHDVKNM---- 677
            +ETP+K  FDPFA   +E  FAP+K  +  + F+    +DG   PS      K +    
Sbjct: 121 GAETPEKNTFDPFASGPEELIFAPKKSHKETVIFD----DDGHA-PSHNPSRTKMISNAQ 175

Query: 676 -----VSRRL-FDHYLNQEEEKVDLHQGFLSDQCGKEAALVEKRDSVICSSPSNVTSFEG 515
                V+R L F+  L+ E E    H   L+      +A  ++ DS+  +   N++S + 
Sbjct: 176 KSRLSVARNLCFESCLDSENEN---HSLGLNTSTVPSSANTDQCDSLDSAEALNLSS-QS 231

Query: 514 HSNAIMRNDNESALFVEKRDSVICSSPSNTTSFEDHSNSIMQNDYDSPLFADQGDLVEAG 335
            S  +   D    L  EKR +    S     S  D    +  +D       ++   +++ 
Sbjct: 232 RSRVVRVLD----LHYEKRSTPEAHSTDGPVSDNDRHIILPVDDV-----CNEETFIQSM 282

Query: 334 KGSLFVKTVCDAWNDAPSD------------GQDSPT--SPLTHVRRSPDPFLLTCPAAP 197
            GS     +   + DA  +            G D P   +P+T   +     +  CP AP
Sbjct: 283 CGSFLEVILSKQYEDAKLNISGSGVKDVSCYGSDQPVPGTPVTP-NKGFSRVVSVCPGAP 341

Query: 196 KKAVAKSGVRISLLNSVRKKLEF 128
            KA  KS  R + L SV +KLEF
Sbjct: 342 IKARPKSRSRGAALGSVCRKLEF 364


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