BLASTX nr result

ID: Ephedra29_contig00008111 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00008111
         (639 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABK22886.1 unknown [Picea sitchensis]                                  94   3e-21

>ABK22886.1 unknown [Picea sitchensis]
          Length = 110

 Score = 93.6 bits (231), Expect = 3e-21
 Identities = 46/80 (57%), Positives = 59/80 (73%), Gaps = 8/80 (10%)
 Frame = +3

Query: 75  MSWWQYVIIVLMVQALLVIILKRSSWVLSKEEKPPGLRPTLSRVISFTSPAISPIFTSN- 251
           M+WW Y+++VL VQ LL++I KRSSW+ SKEE+P  LRPTLSRVISFTSPA++PIFT + 
Sbjct: 14  MNWWTYMVMVLGVQVLLLMIFKRSSWLFSKEERPLRLRPTLSRVISFTSPAVAPIFTPSL 73

Query: 252 -------SHTHRSPSTSQIQ 290
                   H H SPS+S  +
Sbjct: 74  TRRSSHLIHRHPSPSSSSAE 93


Top