BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00008106
         (1069 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019704306.1 PREDICTED: probable RNA polymerase II transcripti...   140   3e-34
XP_010913638.1 PREDICTED: probable RNA polymerase II transcripti...   140   1e-33
XP_009414712.1 PREDICTED: probable RNA polymerase II transcripti...   140   3e-33
XP_008789679.1 PREDICTED: probable RNA polymerase II transcripti...   140   3e-33
XP_010928645.1 PREDICTED: probable RNA polymerase II transcripti...   140   3e-33
XP_008789678.1 PREDICTED: probable RNA polymerase II transcripti...   140   3e-33
XP_020103739.1 probable RNA polymerase II transcription factor B...   139   4e-33
JAT49604.1 putative RNA polymerase II transcription factor B sub...   139   4e-33
JAT46830.1 putative RNA polymerase II transcription factor B sub...   139   7e-33
XP_008800224.1 PREDICTED: probable RNA polymerase II transcripti...   135   1e-31
XP_017700274.1 PREDICTED: probable RNA polymerase II transcripti...   135   2e-31
XP_008800215.1 PREDICTED: probable RNA polymerase II transcripti...   135   2e-31
XP_004972830.1 PREDICTED: probable RNA polymerase II transcripti...   130   3e-30
XP_004972829.1 PREDICTED: probable RNA polymerase II transcripti...   130   9e-30
XP_011628233.1 PREDICTED: probable RNA polymerase II transcripti...   127   1e-28
ERN19104.1 hypothetical protein AMTR_s00061p00135540 [Amborella ...   127   1e-28
NP_001304164.1 uncharacterized protein LOC100193949 [Zea mays]        125   1e-28
AQK50813.1 putative RNA polymerase II transcription factor B sub...   125   1e-28
BAK04994.1 predicted protein, partial [Hordeum vulgare subsp. vu...   126   1e-28
EES13357.2 hypothetical protein SORBI_007G042900 [Sorghum bicolor]    126   1e-28

>XP_019704306.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X4 [Elaeis guineensis]
          Length = 476

 Score =  140 bits (354), Expect = 3e-34
 Identities = 79/179 (44%), Positives = 110/179 (61%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           VI +  KYK + +    PGVL M+E+ F F P+ P +   L  D R IK +K+SKDGSK+
Sbjct: 3   VINMAAKYKTTVKEPGTPGVLRMSEDKFIFVPNDPRSAMKLNVDFRNIKGHKFSKDGSKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQ------YESQL----PSA- 494
           ALL L +D  +K   +IF+F++  DRN CRD V K+LGK+Q         QL    P+A 
Sbjct: 63  ALLNLTQDS-EKGGGYIFEFDNFSDRNVCRDFVGKVLGKFQAMMSSKQNEQLVPEKPAAT 121

Query: 493 --GQPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
             G+ ++  E+  +MKLL++DSEL K H + VIG VLT  +FW   K LLD++A +T K
Sbjct: 122 VHGEQLSTTEMELRMKLLREDSELQKLHKQFVIGGVLTESEFWATRKSLLDDDAQRTAK 180


>XP_010913638.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Elaeis guineensis]
          Length = 606

 Score =  140 bits (354), Expect = 1e-33
 Identities = 79/179 (44%), Positives = 110/179 (61%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           VI +  KYK + +    PGVL M+E+ F F P+ P +   L  D R IK +K+SKDGSK+
Sbjct: 3   VINMAAKYKTTVKEPGTPGVLRMSEDKFIFVPNDPRSAMKLNVDFRNIKGHKFSKDGSKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQ------YESQL----PSA- 494
           ALL L +D  +K   +IF+F++  DRN CRD V K+LGK+Q         QL    P+A 
Sbjct: 63  ALLNLTQDS-EKGGGYIFEFDNFSDRNVCRDFVGKVLGKFQAMMSSKQNEQLVPEKPAAT 121

Query: 493 --GQPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
             G+ ++  E+  +MKLL++DSEL K H + VIG VLT  +FW   K LLD++A +T K
Sbjct: 122 VHGEQLSTTEMELRMKLLREDSELQKLHKQFVIGGVLTESEFWATRKSLLDDDAQRTAK 180


>XP_009414712.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Musa acuminata subsp. malaccensis]
          Length = 602

 Score =  140 bits (352), Expect = 3e-33
 Identities = 79/180 (43%), Positives = 115/180 (63%), Gaps = 10/180 (5%)
 Frame = -1

Query: 832 MAALVIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKD 653
           MAA+  V   KYK + +   +PGVL M E+ F+FTP  P +   L  D R IK +K+SKD
Sbjct: 1   MAAISKV--AKYKTTVKEPGIPGVLNMMEDVFTFTPHDPRSAMKLRVDFRNIKGHKFSKD 58

Query: 652 GSKEALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQ----YESQLPSAG-- 491
           GSK+ALL L +D  +K   +IF+F +  +RN CRD V K+LGK+Q     ++  P++   
Sbjct: 59  GSKQALLNLTQDS-EKGGGYIFEFNNFTERNDCRDFVGKVLGKFQALVSKQNDEPTSEKS 117

Query: 490 ----QPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
               + ++  E+ ++MKLL++DSEL K H ELVIGNVLT  +FW   K+LLD+++ +T K
Sbjct: 118 AVSLEQLSTIEMERRMKLLREDSELQKLHKELVIGNVLTESEFWATRKNLLDDDSDRTLK 177


>XP_008789679.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Phoenix dactylifera]
          Length = 606

 Score =  140 bits (352), Expect = 3e-33
 Identities = 76/179 (42%), Positives = 108/179 (60%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           VI +  KYK + +   +PGVL M+E    F P+ P +   L  D R+IK +K+SKDGSK+
Sbjct: 3   VINMAAKYKTTVKEPGIPGVLKMSEEKIIFIPNDPRSAMKLNVDFRSIKGHKFSKDGSKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKY-------QYESQLPSA---- 494
           ALL L +D  +K   +IF+F+   DRN CRD V K+LGK+       Q E  +P      
Sbjct: 63  ALLNLTQDS-EKGGGYIFEFDKFSDRNVCRDFVGKVLGKFQAMMSSKQNEQPVPEKPAAT 121

Query: 493 --GQPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
             G+ ++  E+  +MKLL++DSEL K H + VIG VLT  +FW   K LLD++A +T+K
Sbjct: 122 MHGEQLSTTEMEHRMKLLREDSELQKLHKQFVIGGVLTESEFWATRKSLLDDDAQRTSK 180


>XP_010928645.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Elaeis guineensis]
          Length = 607

 Score =  140 bits (352), Expect = 3e-33
 Identities = 76/179 (42%), Positives = 109/179 (60%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           VI +  KYK   +   +PGVL M+E  F F P+ P +   L  D R+IK +K+SKDGSK+
Sbjct: 3   VINMAAKYKTMVKEPGIPGVLKMSEEKFIFIPNDPRSAMKLNVDFRSIKGHKFSKDGSKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKY-------QYESQLPSA---- 494
           ALL L +D  +K   +IF+F++  +RN CRD V K+LGK+       Q E  +P      
Sbjct: 63  ALLNLTQDS-EKGGGYIFEFDNFSNRNVCRDFVGKVLGKFQALMSSKQNEQPVPEKPAAA 121

Query: 493 --GQPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
             G+ ++  E+  +MKLL++DSEL K H + VIG VLT  +FW   K LLD++A +T+K
Sbjct: 122 IHGEQLSTTEMEHRMKLLREDSELQKLHKQFVIGGVLTESEFWATRKSLLDDDAQRTSK 180


>XP_008789678.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Phoenix dactylifera]
          Length = 607

 Score =  140 bits (352), Expect = 3e-33
 Identities = 76/179 (42%), Positives = 108/179 (60%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           VI +  KYK + +   +PGVL M+E    F P+ P +   L  D R+IK +K+SKDGSK+
Sbjct: 3   VINMAAKYKTTVKEPGIPGVLKMSEEKIIFIPNDPRSAMKLNVDFRSIKGHKFSKDGSKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKY-------QYESQLPSA---- 494
           ALL L +D  +K   +IF+F+   DRN CRD V K+LGK+       Q E  +P      
Sbjct: 63  ALLNLTQDS-EKGGGYIFEFDKFSDRNVCRDFVGKVLGKFQAMMSSKQNEQPVPEKPAAT 121

Query: 493 --GQPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
             G+ ++  E+  +MKLL++DSEL K H + VIG VLT  +FW   K LLD++A +T+K
Sbjct: 122 MHGEQLSTTEMEHRMKLLREDSELQKLHKQFVIGGVLTESEFWATRKSLLDDDAQRTSK 180


>XP_020103739.1 probable RNA polymerase II transcription factor B subunit 1-1
           [Ananas comosus]
          Length = 618

 Score =  139 bits (351), Expect = 4e-33
 Identities = 77/179 (43%), Positives = 111/179 (62%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           VI + VKYK + +   +PGVL M E+ F+F P+ P +   L  D RTIK +K+SKDGSK+
Sbjct: 3   VINMAVKYKTTVKEHGIPGVLKMMEDRFAFVPNDPRSAMKLKVDFRTIKGHKFSKDGSKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQ-------YESQLP------ 500
           ALL L +D  +K   +IF+F++  DRN CRD V K+LGK+Q        E  +P      
Sbjct: 63  ALLNLTQD-AEKGVGYIFEFDNFSDRNVCRDFVGKVLGKFQSVTPSKPNEQSVPEKPAAL 121

Query: 499 SAGQPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
           S  + ++  E+ ++MKLL++DSEL K H + VI  VLT  +FW   K LLD++ +K +K
Sbjct: 122 SHVEQLSTVEMERRMKLLREDSELQKLHKQFVISGVLTESEFWATRKSLLDDDENKASK 180


>JAT49604.1 putative RNA polymerase II transcription factor B subunit 1-1
           [Anthurium amnicola]
          Length = 555

 Score =  139 bits (349), Expect = 4e-33
 Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           V+V+  KYKP+ +   +PG+L MTE+ F+FTPS   +   L      IKA++++K+G+K+
Sbjct: 3   VVVMATKYKPAVKEPGIPGMLRMTEDRFTFTPSDKRSSTKLDVSFSKIKAHRFTKEGTKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQ-----------YESQLPSA 494
           ALL ++ D  +K   +IF+F+S  DRN CRD V K+LGK+Q            ES  P  
Sbjct: 63  ALLNILHDS-EKGGGYIFEFDSFPDRNVCRDFVGKVLGKFQTPSPGQTAQAVSESSTPVH 121

Query: 493 GQPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
           G+ ++  E+ ++MKLL+ DSEL K H + V+  VLT  +FW   K++LD +  +T+K
Sbjct: 122 GEQLSATELERRMKLLRDDSELQKLHRQFVMSGVLTEAEFWATRKNMLDIDTCRTSK 178


>JAT46830.1 putative RNA polymerase II transcription factor B subunit 1-1
           [Anthurium amnicola]
          Length = 604

 Score =  139 bits (349), Expect = 7e-33
 Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           V+V+  KYKP+ +   +PG+L MTE+ F+FTPS   +   L      IKA++++K+G+K+
Sbjct: 3   VVVMATKYKPAVKEPGIPGMLRMTEDRFTFTPSDKRSSTKLDVSFSKIKAHRFTKEGTKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQ-----------YESQLPSA 494
           ALL ++ D  +K   +IF+F+S  DRN CRD V K+LGK+Q            ES  P  
Sbjct: 63  ALLNILHDS-EKGGGYIFEFDSFPDRNVCRDFVGKVLGKFQTPSPGQTAQAVSESSTPVH 121

Query: 493 GQPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
           G+ ++  E+ ++MKLL+ DSEL K H + V+  VLT  +FW   K++LD +  +T+K
Sbjct: 122 GEQLSATELERRMKLLRDDSELQKLHRQFVMSGVLTEAEFWATRKNMLDIDTCRTSK 178


>XP_008800224.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X3 [Phoenix dactylifera]
          Length = 567

 Score =  135 bits (339), Expect = 1e-31
 Identities = 75/179 (41%), Positives = 104/179 (58%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           VI +  KYK + +    PGVL M+E+ F F P+ P +   L  + R IK +K+SKDGSK+
Sbjct: 3   VINMAAKYKTTVKEPGTPGVLRMSEDKFIFVPNDPRSAMKLNVNFRNIKGHKFSKDGSKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQYESQLPSAGQPMTE----- 476
           ALL L +D  +K   +IF+F++  DRN CRD V K+LGK+Q  +      QP+ E     
Sbjct: 63  ALLNLTQDS-EKGGGYIFEFDNFSDRNVCRDFVGKVLGKFQAVTSSRQNEQPVPEKPAAT 121

Query: 475 --------AEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
                    E+ ++MKLL +DSEL K H + VIG VLT  +FW   K LLD+   +T K
Sbjct: 122 VHSEQLSTTEMERRMKLLWEDSELQKLHKQFVIGGVLTESEFWATRKSLLDDVVQRTPK 180


>XP_017700274.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Phoenix dactylifera]
          Length = 606

 Score =  135 bits (339), Expect = 2e-31
 Identities = 75/179 (41%), Positives = 104/179 (58%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           VI +  KYK + +    PGVL M+E+ F F P+ P +   L  + R IK +K+SKDGSK+
Sbjct: 3   VINMAAKYKTTVKEPGTPGVLRMSEDKFIFVPNDPRSAMKLNVNFRNIKGHKFSKDGSKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQYESQLPSAGQPMTE----- 476
           ALL L +D  +K   +IF+F++  DRN CRD V K+LGK+Q  +      QP+ E     
Sbjct: 63  ALLNLTQDS-EKGGGYIFEFDNFSDRNVCRDFVGKVLGKFQAVTSSRQNEQPVPEKPAAT 121

Query: 475 --------AEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
                    E+ ++MKLL +DSEL K H + VIG VLT  +FW   K LLD+   +T K
Sbjct: 122 VHSEQLSTTEMERRMKLLWEDSELQKLHKQFVIGGVLTESEFWATRKSLLDDVVQRTPK 180


>XP_008800215.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Phoenix dactylifera]
          Length = 607

 Score =  135 bits (339), Expect = 2e-31
 Identities = 75/179 (41%), Positives = 104/179 (58%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSKE 641
           VI +  KYK + +    PGVL M+E+ F F P+ P +   L  + R IK +K+SKDGSK+
Sbjct: 3   VINMAAKYKTTVKEPGTPGVLRMSEDKFIFVPNDPRSAMKLNVNFRNIKGHKFSKDGSKQ 62

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQYESQLPSAGQPMTE----- 476
           ALL L +D  +K   +IF+F++  DRN CRD V K+LGK+Q  +      QP+ E     
Sbjct: 63  ALLNLTQDS-EKGGGYIFEFDNFSDRNVCRDFVGKVLGKFQAVTSSRQNEQPVPEKPAAT 121

Query: 475 --------AEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
                    E+ ++MKLL +DSEL K H + VIG VLT  +FW   K LLD+   +T K
Sbjct: 122 VHSEQLSTTEMERRMKLLWEDSELQKLHKQFVIGGVLTESEFWATRKSLLDDVVQRTPK 180


>XP_004972830.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Setaria italica]
          Length = 476

 Score =  130 bits (326), Expect = 3e-30
 Identities = 68/176 (38%), Positives = 115/176 (65%), Gaps = 11/176 (6%)
 Frame = -1

Query: 817 IVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSK-DGSKE 641
           + +  KYK + +    PG+L M ++ F+FTP+ P +   L  + R+IK +K++K DG+K 
Sbjct: 4   LTIGAKYKTTLKDPGTPGILRMNDDKFTFTPNDPRSAMKLNVEFRSIKGHKFNKVDGNKP 63

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQ---------YESQLPSAG- 491
           ALL L +D  DK   ++F+F+++ +R+ CRD V+++LGK+Q          E  +PSAG 
Sbjct: 64  ALLNLSKDS-DKGGGYMFEFDNVGNRDLCRDFVARVLGKHQGMPPRPTMPPEISVPSAGM 122

Query: 490 QPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
           + ++ AE+ +++KLL++DSEL K H + V+GN+L   +FW   K+LLD+ A+K +K
Sbjct: 123 EQLSAAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDVANKASK 178


>XP_004972829.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Setaria italica] KQL00775.1
           hypothetical protein SETIT_013446mg [Setaria italica]
          Length = 600

 Score =  130 bits (326), Expect = 9e-30
 Identities = 68/176 (38%), Positives = 115/176 (65%), Gaps = 11/176 (6%)
 Frame = -1

Query: 817 IVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSK-DGSKE 641
           + +  KYK + +    PG+L M ++ F+FTP+ P +   L  + R+IK +K++K DG+K 
Sbjct: 4   LTIGAKYKTTLKDPGTPGILRMNDDKFTFTPNDPRSAMKLNVEFRSIKGHKFNKVDGNKP 63

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQ---------YESQLPSAG- 491
           ALL L +D  DK   ++F+F+++ +R+ CRD V+++LGK+Q          E  +PSAG 
Sbjct: 64  ALLNLSKDS-DKGGGYMFEFDNVGNRDLCRDFVARVLGKHQGMPPRPTMPPEISVPSAGM 122

Query: 490 QPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
           + ++ AE+ +++KLL++DSEL K H + V+GN+L   +FW   K+LLD+ A+K +K
Sbjct: 123 EQLSAAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDVANKASK 178


>XP_011628233.1 PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-3 [Amborella trichopoda]
          Length = 606

 Score =  127 bits (318), Expect = 1e-28
 Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSA-RLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSK 644
           V+ +  KYK S  +   V GVLTM ++SF F P+ P +   L    R IK +K+SK+GSK
Sbjct: 5   VVTMRAKYKASGPKDPGVAGVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGSK 64

Query: 643 EALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQY-----ESQLPSAGQPMT 479
           +ALL L +D   K   ++F+F +  DR+ CRDLV ++LG+ Q      +S      QP T
Sbjct: 65  QALLNLTQD---KGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPPSDQSAQVVPAQPTT 121

Query: 478 E-------AEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
           +       AE+ Q+M LL++DSEL K H +LVIG VLT  +FW   K+LLD+ A K +K
Sbjct: 122 QHDNQLSMAEMEQRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKASK 180


>ERN19104.1 hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score =  127 bits (318), Expect = 1e-28
 Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 13/179 (7%)
 Frame = -1

Query: 820 VIVLDVKYKPSA-RLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSKDGSK 644
           V+ +  KYK S  +   V GVLTM ++SF F P+ P +   L    R IK +K+SK+GSK
Sbjct: 5   VVTMRAKYKASGPKDPGVAGVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGSK 64

Query: 643 EALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQY-----ESQLPSAGQPMT 479
           +ALL L +D   K   ++F+F +  DR+ CRDLV ++LG+ Q      +S      QP T
Sbjct: 65  QALLNLTQD---KGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPPSDQSAQVVPAQPTT 121

Query: 478 E-------AEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
           +       AE+ Q+M LL++DSEL K H +LVIG VLT  +FW   K+LLD+ A K +K
Sbjct: 122 QHDNQLSMAEMEQRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKASK 180


>NP_001304164.1 uncharacterized protein LOC100193949 [Zea mays]
          Length = 476

 Score =  125 bits (314), Expect = 1e-28
 Identities = 67/177 (37%), Positives = 113/177 (63%), Gaps = 12/177 (6%)
 Frame = -1

Query: 817 IVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSK-DGSKE 641
           + +  KYK + +    PG+L M  + F+FTP+ P +      D RTIK +K++K +G+K 
Sbjct: 4   MTIGAKYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEGNKA 63

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQY----------ESQLPSAG 491
           ALL L ++  DK   +IF+F+++ +R+ CRD V+++LGK+Q           E+ + SA 
Sbjct: 64  ALLNLSKE--DKAGGYIFEFDNVGNRDQCRDFVARVLGKHQGIVPPRPTVAPENSVASAA 121

Query: 490 -QPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
            + ++ AE+ +++KLL++DSEL K H + V+GN+L   +FW   K+LLD+EA+K +K
Sbjct: 122 LEQLSAAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEANKRSK 178


>AQK50813.1 putative RNA polymerase II transcription factor B subunit 1-1 [Zea
           mays]
          Length = 477

 Score =  125 bits (314), Expect = 1e-28
 Identities = 67/177 (37%), Positives = 113/177 (63%), Gaps = 12/177 (6%)
 Frame = -1

Query: 817 IVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSK-DGSKE 641
           + +  KYK + +    PG+L M  + F+FTP+ P +      D RTIK +K++K +G+K 
Sbjct: 4   MTIGAKYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEGNKA 63

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQY----------ESQLPSAG 491
           ALL L ++  DK   +IF+F+++ +R+ CRD V+++LGK+Q           E+ + SA 
Sbjct: 64  ALLNLSKE--DKAGGYIFEFDNVGNRDQCRDFVARVLGKHQGIVPPRPTVAPENSVASAA 121

Query: 490 -QPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
            + ++ AE+ +++KLL++DSEL K H + V+GN+L   +FW   K+LLD+EA+K +K
Sbjct: 122 LEQLSAAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEANKRSK 178


>BAK04994.1 predicted protein, partial [Hordeum vulgare subsp. vulgare]
          Length = 596

 Score =  126 bits (317), Expect = 1e-28
 Identities = 71/177 (40%), Positives = 111/177 (62%), Gaps = 14/177 (7%)
 Frame = -1

Query: 811 LDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSK-DGSKE-- 641
           +  KYK + +     GVL M+E+ F+FTP+ P +   L  D +TIK +K++K DGSK   
Sbjct: 2   IGAKYKATLKDRGTGGVLRMSEDKFTFTPNDPRSLMKLSVDFQTIKGHKFNKVDGSKPTP 61

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQYE-----------SQLPSA 494
           ALL L +D  DK   +IF+F+++ +R+ CRD V+++LGKYQ             S + + 
Sbjct: 62  ALLNLSKDS-DKGGGYIFEFDNVGNRDLCRDFVARVLGKYQGTVPARPNVPPELSAVSTG 120

Query: 493 GQPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
            + ++ AE+ ++MKLL++DSEL K H + V+GN+L   +FW   K+LLD+E SK +K
Sbjct: 121 PEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETSKGSK 177


>EES13357.2 hypothetical protein SORBI_007G042900 [Sorghum bicolor]
          Length = 600

 Score =  126 bits (317), Expect = 1e-28
 Identities = 67/177 (37%), Positives = 114/177 (64%), Gaps = 12/177 (6%)
 Frame = -1

Query: 817 IVLDVKYKPSARLADVPGVLTMTENSFSFTPSCPGTFPVLGADLRTIKAYKYSK-DGSKE 641
           + +  KYK + +    PG+L M ++ F+FTP+ P +      D RTIK +K++K +G+K 
Sbjct: 4   MTIGAKYKTTIKDPGTPGILRMNDDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEGNKA 63

Query: 640 ALLKLIRDPVDKEAEFIFKFESICDRNACRDLVSKILGKYQY----------ESQLPSAG 491
           ALL L ++  DK   +IF+F+++ +R+ CRD V+++LGK+Q           E+ + SA 
Sbjct: 64  ALLNLSKE--DKAGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPPRPTVAPENSVASAA 121

Query: 490 -QPMTEAEIIQKMKLLQKDSELLKQHHELVIGNVLTVDQFWGKHKHLLDEEASKTTK 323
            + ++ AE+ +++KLL++DSEL K H + V+GN+L   +FW   K+LLD+EA+K +K
Sbjct: 122 LEQLSVAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEANKRSK 178