BLASTX nr result

ID: Ephedra29_contig00007788 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00007788
         (618 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR16860.1 unknown [Picea sitchensis]                                  57   5e-06
ABK22961.1 unknown [Picea sitchensis]                                  56   1e-05

>ABR16860.1 unknown [Picea sitchensis]
          Length = 447

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 9/187 (4%)
 Frame = +2

Query: 2   QFMKALGEIAKKGDQVFSSLAFPVCWKREHLAPRERPLINMEELSKKEEALPEGDFKKPL 181
           QF+ A+ ++A+        L+    WKRE L PR  P +N +    +   +       P+
Sbjct: 174 QFLNAIADLARGAPL----LSVTPVWKREILKPRSPPTVNFDHKEFRSSVIDVTATGGPV 229

Query: 182 AMSTFEFSPQLIERLKESVVTQSNGDLN---YCSTFEAVVPLLWETYAKSMEYNAN-VMS 349
             S F  + Q +++LK++V+     D     YCSTFEA+   +W++  K++E + +  + 
Sbjct: 230 PGS-FLVTAQSLDKLKKNVLAGKMKDDEQYLYCSTFEALAAFVWKSRVKALEISFDEEVR 288

Query: 350 FSFIMNARNAMRMVVPEXXXXXXXXXXXXXXXXXXXS-----DIVKSIRKAKSTVDEAMV 514
             F +N R   R  +PE                         D+V+ +++ K+ + +  +
Sbjct: 289 LYFAVNVRKLYRPPLPEGYYGNGFFGACVVASARVVREASLWDLVRMVKEEKARLTDEYL 348

Query: 515 WSIIEYL 535
            S+I++L
Sbjct: 349 RSVIDFL 355


>ABK22961.1 unknown [Picea sitchensis]
          Length = 457

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
 Frame = +2

Query: 2   QFMKALGEIAKKGDQVFSSLAFPVCWKREHLAPRERPLINMEELSKKEEALPEGDFKKP- 178
           QF+K LGEIA +G+   + L+    W+RE L P++  L+  +     +E L  G    P 
Sbjct: 180 QFLKGLGEIA-RGE---TKLSVEPVWQREFLKPQQTHLVRFQH----DELLESGFIVNPN 231

Query: 179 --------------LAMSTFEFSPQLIERLKESVVTQSNGDLNYCSTFEAVVPLLWET-- 310
                         LA+++F FS   ++R+K+ +      +   C+TFE +  L W    
Sbjct: 232 CSIQQQLPAKKAEDLALTSFFFSSDALQRIKQPIAEDLKEN---CTTFEVLAALAWRARI 288

Query: 311 YAKSMEYNANVMSFSFIMNARNAMRMVVPE------XXXXXXXXXXXXXXXXXXXSDIVK 472
            A  +  N N + F F ++ R A    +PE                         S  VK
Sbjct: 289 MALGIPLN-NAVRFLFGVDMRRAFDPPLPEGYYGNVSYMAYAHSTTAKEVVNGSLSHAVK 347

Query: 473 SIRKAKSTVDEAMVWSIIEYLH--RECG 550
            I+ AK +V+E  V S I +L   R CG
Sbjct: 348 MIKNAKLSVNEEYVRSSIAFLEMKRSCG 375


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