BLASTX nr result
ID: Ephedra29_contig00007708
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00007708
(767 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BAA97166.1 40S ribosomal protein S19 [Arabidopsis thaliana] 75 1e-12
NP_568681.1 ribosomal protein S19 [Arabidopsis thaliana] P39697.... 73 5e-12
XP_004297041.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 71 9e-12
CAA54951.1 ribosomal protein S19 [Arabidopsis thaliana] CAA54965... 72 9e-12
ABK22994.1 unknown [Picea sitchensis] 71 1e-11
XP_010532757.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 70 2e-11
XP_007227561.1 hypothetical protein PRUPE_ppa013208mg [Prunus pe... 69 4e-11
XP_008222814.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 69 4e-11
XP_010481341.1 PREDICTED: 40S ribosomal protein S19, mitochondri... 70 7e-11
XP_010441475.1 PREDICTED: 40S ribosomal protein S19, mitochondri... 70 7e-11
XP_010551665.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 68 1e-10
XP_018461184.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 68 1e-10
XP_018447917.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 68 1e-10
XP_013695607.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 67 2e-10
XP_009107499.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 67 2e-10
XP_013602419.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 67 2e-10
XP_018508957.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 67 2e-10
JAU12089.1 Glycine-rich RNA-binding protein 4, mitochondrial, pa... 68 2e-10
XP_013695613.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 67 3e-10
XP_010512958.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 67 3e-10
>BAA97166.1 40S ribosomal protein S19 [Arabidopsis thaliana]
Length = 244
Score = 75.5 bits (184), Expect = 1e-12
Identities = 50/157 (31%), Positives = 79/157 (50%)
Frame = -3
Query: 519 RFIRSALECLPNRSDHISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRF 340
RF S++ H + V++P+ S+ + R+MS+K+Y+GGLS D LKD+FS F
Sbjct: 27 RFQASSMAFCTKLGGHWKQGVNVPVSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSF 86
Query: 339 GNITDVIXXXXXXXXXXXXGSRGYGFVEFSSKKEADAAIAAMNGKRSYKWL*HMNELG*L 160
+T+ SRGYGFV F S+ A++AI+AMNG+ +N
Sbjct: 87 NGVTEA----RVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQ-------ELNGFNIS 135
Query: 159 IDWKQDVDVKILSLSPFLSRTERICFEKDNKKICVSI 49
++ +D LSL + E+ K+NK + S+
Sbjct: 136 VNVAKDWPSLPLSLDESIEEAEK----KENKMMSRSV 168
>NP_568681.1 ribosomal protein S19 [Arabidopsis thaliana] P39697.2 RecName:
Full=40S ribosomal protein S19, mitochondrial; Flags:
Precursor AAK76637.1 putative 40S ribosomal protein S19
[Arabidopsis thaliana] AAM14293.1 putative 40S ribosomal
protein S19 [Arabidopsis thaliana] AED95498.1 ribosomal
protein S19 [Arabidopsis thaliana] OAO93403.1 RPS19
[Arabidopsis thaliana]
Length = 212
Score = 73.2 bits (178), Expect = 5e-12
Identities = 47/142 (33%), Positives = 74/142 (52%)
Frame = -3
Query: 474 HISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXX 295
H + V++P+ S+ + R+MS+K+Y+GGLS D LKD+FS F +T+
Sbjct: 10 HWKQGVNVPVSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEA----RVMTN 65
Query: 294 XXXXGSRGYGFVEFSSKKEADAAIAAMNGKRSYKWL*HMNELG*LIDWKQDVDVKILSLS 115
SRGYGFV F S+ A++AI+AMNG+ +N ++ +D LSL
Sbjct: 66 KVTGRSRGYGFVNFISEDSANSAISAMNGQ-------ELNGFNISVNVAKDWPSLPLSLD 118
Query: 114 PFLSRTERICFEKDNKKICVSI 49
+ E+ K+NK + S+
Sbjct: 119 ESIEEAEK----KENKMMSRSV 136
>XP_004297041.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Fragaria vesca subsp. vesca]
Length = 143
Score = 70.9 bits (172), Expect = 9e-12
Identities = 36/89 (40%), Positives = 57/89 (64%)
Frame = -3
Query: 471 ISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXXX 292
IS+N P+ S+ ++AR+MSSK+++GGLS D LK++FS FG++TD
Sbjct: 15 ISQNGQAPMASMLNSARYMSSKLFIGGLSFSTDDTSLKEAFSGFGDVTDA----KVIMDR 70
Query: 291 XXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV F ++ A++A+ AM+G+
Sbjct: 71 DTGRSRGFGFVNFVDEEAANSALTAMDGQ 99
>CAA54951.1 ribosomal protein S19 [Arabidopsis thaliana] CAA54965.1
mitochondrial ribosomal protein S19, nuclear encoded
[Arabidopsis thaliana]
Length = 212
Score = 72.4 bits (176), Expect = 9e-12
Identities = 37/90 (41%), Positives = 55/90 (61%)
Frame = -3
Query: 474 HISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXX 295
H + V++P+ S+ + R+MS+K+Y+GGLS D LKD+FS F +T+
Sbjct: 10 HWKQGVNVPVSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEA----RVMTN 65
Query: 294 XXXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRGYGFV F S+ A++AI+AMNG+
Sbjct: 66 KVTGRSRGYGFVNFISEDSANSAISAMNGQ 95
>ABK22994.1 unknown [Picea sitchensis]
Length = 157
Score = 70.9 bits (172), Expect = 1e-11
Identities = 38/90 (42%), Positives = 57/90 (63%)
Frame = -3
Query: 474 HISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXX 295
H+S S+ + +I+ A R MSSK++VGGLS VD + L++SF+ FG++ +
Sbjct: 18 HVSSRPSVYMPAIYSAFRCMSSKVFVGGLSYGVDDQTLRESFATFGDVMEA----KIIND 73
Query: 294 XXXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV F+S EA+AA+ AM+GK
Sbjct: 74 RETGRSRGFGFVTFASPDEANAAVEAMDGK 103
>XP_010532757.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial
[Tarenaya hassleriana]
Length = 145
Score = 69.7 bits (169), Expect = 2e-11
Identities = 36/89 (40%), Positives = 55/89 (61%)
Frame = -3
Query: 471 ISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXXX 292
+S N P+ S+ + R+MS+K++VGGLS D + L+D+FS +G ITD
Sbjct: 15 VSHNAQAPVSSMLGSLRYMSTKLFVGGLSWGTDDQSLRDAFSTYGEITDA----RVIVDR 70
Query: 291 XXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV FSS++ A AA++ M+G+
Sbjct: 71 DSGRSRGFGFVNFSSEESATAAMSGMDGQ 99
>XP_007227561.1 hypothetical protein PRUPE_ppa013208mg [Prunus persica] ONI28843.1
hypothetical protein PRUPE_1G164600 [Prunus persica]
Length = 135
Score = 68.9 bits (167), Expect = 4e-11
Identities = 36/89 (40%), Positives = 57/89 (64%)
Frame = -3
Query: 471 ISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXXX 292
IS+N P+ S+ +AAR MSSK+++GGLS + LK++FS FG++T+
Sbjct: 15 ISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEA----RVIMDR 70
Query: 291 XXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV+F+S + A +A+ AM+G+
Sbjct: 71 NTGKSRGFGFVDFASDESASSALNAMDGQ 99
>XP_008222814.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Prunus mume]
Length = 140
Score = 68.9 bits (167), Expect = 4e-11
Identities = 36/89 (40%), Positives = 57/89 (64%)
Frame = -3
Query: 471 ISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXXX 292
IS+N P+ S+ +AAR MSSK+++GGLS + LK++FS FG++T+
Sbjct: 15 ISQNGQTPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEA----RVIMDR 70
Query: 291 XXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV+F+S + A +A+ AM+G+
Sbjct: 71 NTGKSRGFGFVDFASDESASSALNAMDGQ 99
>XP_010481341.1 PREDICTED: 40S ribosomal protein S19, mitochondrial [Camelina
sativa] XP_010481342.1 PREDICTED: 40S ribosomal protein
S19, mitochondrial [Camelina sativa]
Length = 217
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/89 (40%), Positives = 55/89 (61%)
Frame = -3
Query: 471 ISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXXX 292
+ +N ++PL S+ + R+MS+K+Y+GGLS D + LKD+FS F +T+
Sbjct: 15 VVQNRNVPLTSMLTSLRYMSTKLYIGGLSPGTDEQSLKDAFSSFNGVTEA----RVMTNK 70
Query: 291 XXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRGYGFV F S+ A +AI+AM+G+
Sbjct: 71 VTGRSRGYGFVNFMSEDSAKSAISAMDGQ 99
>XP_010441475.1 PREDICTED: 40S ribosomal protein S19, mitochondrial [Camelina
sativa] XP_010441476.1 PREDICTED: 40S ribosomal protein
S19, mitochondrial [Camelina sativa] XP_010441477.1
PREDICTED: 40S ribosomal protein S19, mitochondrial
[Camelina sativa]
Length = 217
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/89 (40%), Positives = 55/89 (61%)
Frame = -3
Query: 471 ISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXXX 292
+ +N ++PL S+ + R+MS+K+Y+GGLS D + LKD+FS F +T+
Sbjct: 15 VVQNRNVPLTSMLTSLRYMSTKLYIGGLSPGTDEQSLKDAFSSFSGVTEA----RVMTNK 70
Query: 291 XXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRGYGFV F S+ A +AI+AM+G+
Sbjct: 71 VTGRSRGYGFVNFMSEDSAKSAISAMDGQ 99
>XP_010551665.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Tarenaya hassleriana]
Length = 137
Score = 67.8 bits (164), Expect = 1e-10
Identities = 34/89 (38%), Positives = 56/89 (62%)
Frame = -3
Query: 471 ISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXXX 292
+++N P+ S+ + R+MS+KI+VGGLS D + L++ FS++G++ D
Sbjct: 15 VTQNAQAPVSSLLCSVRYMSTKIFVGGLSWGTDDQSLREVFSKYGDVVDA----RVIVDR 70
Query: 291 XXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV FSS++ A +AI+ M+GK
Sbjct: 71 DSGRSRGFGFVNFSSEESATSAISDMDGK 99
>XP_018461184.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Raphanus sativus]
Length = 144
Score = 67.8 bits (164), Expect = 1e-10
Identities = 35/93 (37%), Positives = 57/93 (61%)
Frame = -3
Query: 483 RSDHISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXX 304
R +S+ ++P++S+ + R+MS+K++VGGLS D + L+++FS FG + D
Sbjct: 12 RQGSVSQTGNVPVQSMIGSLRYMSTKLFVGGLSWGTDDQSLREAFSNFGEVID----SKV 67
Query: 303 XXXXXXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV FS + A+AAI+ M+GK
Sbjct: 68 IVDRETGRSRGFGFVNFSDESAANAAISEMDGK 100
>XP_018447917.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Raphanus sativus]
Length = 150
Score = 67.8 bits (164), Expect = 1e-10
Identities = 35/93 (37%), Positives = 57/93 (61%)
Frame = -3
Query: 483 RSDHISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXX 304
R +S+ ++P++S+ + R+MS+K++VGGLS D + L+++FS FG + D
Sbjct: 12 RQGSVSQTGNVPVQSMLGSLRYMSTKLFVGGLSWGTDDQSLREAFSNFGEVID----SKV 67
Query: 303 XXXXXXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV FS + A+AAI+ M+GK
Sbjct: 68 IVDRETGRSRGFGFVNFSDESAANAAISEMDGK 100
>XP_013695607.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brassica napus] CDY47311.1 BnaAnng08850D [Brassica
napus]
Length = 144
Score = 67.4 bits (163), Expect = 2e-10
Identities = 35/93 (37%), Positives = 57/93 (61%)
Frame = -3
Query: 483 RSDHISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXX 304
R +S+ ++P++S+ + R+MS+K++VGGLS D + L+++FS FG + D
Sbjct: 12 RQGAVSQTGNVPVQSMLGSLRYMSTKLFVGGLSWGTDDQSLREAFSNFGEVID----SKV 67
Query: 303 XXXXXXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV FS + A+AAI+ M+GK
Sbjct: 68 IVDRETGRSRGFGFVNFSDESAANAAISEMDGK 100
>XP_009107499.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brassica rapa] XP_018508933.1 PREDICTED: glycine-rich
RNA-binding protein 2, mitochondrial-like [Brassica
rapa] XP_018508934.1 PREDICTED: glycine-rich RNA-binding
protein 2, mitochondrial-like [Brassica rapa]
Length = 145
Score = 67.4 bits (163), Expect = 2e-10
Identities = 35/93 (37%), Positives = 57/93 (61%)
Frame = -3
Query: 483 RSDHISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXX 304
R +S+ ++P++S+ + R+MS+K++VGGLS D + L+++FS FG + D
Sbjct: 12 RQGAVSQTGNVPVQSMLGSLRYMSTKLFVGGLSWGTDDQSLREAFSNFGEVID----SKV 67
Query: 303 XXXXXXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV FS + A+AAI+ M+GK
Sbjct: 68 IVDRETGRSRGFGFVNFSDESAANAAISEMDGK 100
>XP_013602419.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brassica oleracea var. oleracea] XP_013653535.1
PREDICTED: glycine-rich RNA-binding protein 2,
mitochondrial-like [Brassica napus] CDY53035.1
BnaCnng24070D [Brassica napus]
Length = 151
Score = 67.4 bits (163), Expect = 2e-10
Identities = 35/93 (37%), Positives = 57/93 (61%)
Frame = -3
Query: 483 RSDHISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXX 304
R +S+ ++P++S+ + R+MS+K++VGGLS D + L+++FS FG + D
Sbjct: 12 RQGAVSQTGNVPVQSMLGSLRYMSTKLFVGGLSWGTDDQSLREAFSNFGEVID----SKV 67
Query: 303 XXXXXXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV FS + A+AAI+ M+GK
Sbjct: 68 IVDRETGRSRGFGFVNFSDESAANAAISEMDGK 100
>XP_018508957.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial
[Brassica rapa]
Length = 152
Score = 67.4 bits (163), Expect = 2e-10
Identities = 35/93 (37%), Positives = 57/93 (61%)
Frame = -3
Query: 483 RSDHISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXX 304
R +S+ ++P++S+ + R+MS+K++VGGLS D + L+++FS FG + D
Sbjct: 12 RQGAVSQTGNVPVQSMLGSLRYMSTKLFVGGLSWGTDDQSLREAFSNFGEVID----SKV 67
Query: 303 XXXXXXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV FS + A+AAI+ M+GK
Sbjct: 68 IVDRETGRSRGFGFVNFSDESAANAAISEMDGK 100
>JAU12089.1 Glycine-rich RNA-binding protein 4, mitochondrial, partial [Noccaea
caerulescens]
Length = 175
Score = 67.8 bits (164), Expect = 2e-10
Identities = 34/89 (38%), Positives = 57/89 (64%)
Frame = -3
Query: 471 ISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXXX 292
+S++ ++P+ S+ + R+MS+K++VGGLS D + LK++FS FG +T+ +
Sbjct: 51 VSQSSNVPVTSMLGSLRYMSTKVFVGGLSWGTDDQSLKEAFSNFGEVTEAL----VISDR 106
Query: 291 XXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV F+S+ A AI+ M+GK
Sbjct: 107 ETGRSRGFGFVSFNSEDSATNAISEMDGK 135
>XP_013695613.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brassica napus] CDY47314.1 BnaAnng08880D [Brassica
napus]
Length = 150
Score = 67.0 bits (162), Expect = 3e-10
Identities = 35/93 (37%), Positives = 57/93 (61%)
Frame = -3
Query: 483 RSDHISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXX 304
R +S+ ++P++S+ + R+MS+K++VGGLS D + L+++FS FG + D
Sbjct: 12 RQGAVSQTGNVPVQSMLGSLRYMSTKLFVGGLSWGTDDQSLREAFSNFGEVID----SKV 67
Query: 303 XXXXXXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV FS + A+AAI+ M+GK
Sbjct: 68 IVDRETGRSRGFGFVNFSDETAANAAISEMDGK 100
>XP_010512958.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Camelina sativa]
Length = 138
Score = 66.6 bits (161), Expect = 3e-10
Identities = 34/89 (38%), Positives = 54/89 (60%)
Frame = -3
Query: 471 ISENVSLPLRSIFHAARFMSSKIYVGGLSKYVDHKILKDSFSRFGNITDVIXXXXXXXXX 292
+S + ++P+ S+ + R+MS+K++VGGLS D LK +FS FG +T+
Sbjct: 15 VSHSSNVPVTSMLGSLRYMSTKLFVGGLSWGTDDSSLKQAFSNFGEVTEA----TVISDR 70
Query: 291 XXXGSRGYGFVEFSSKKEADAAIAAMNGK 205
SRG+GFV FSS+ A+ A++ M+GK
Sbjct: 71 ETGRSRGFGFVSFSSEDSANTAVSEMDGK 99