BLASTX nr result
ID: Ephedra29_contig00007536
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00007536 (1774 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJP06347.1 RDR6 [Pinus tabuliformis] 700 0.0 XP_006842072.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ambore... 602 0.0 XP_006842073.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ambore... 600 0.0 XP_018847783.1 PREDICTED: RNA-dependent RNA polymerase 6-like [J... 586 0.0 XP_018678117.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-depe... 593 0.0 XP_011459183.1 PREDICTED: RNA-dependent RNA polymerase 6 isoform... 593 0.0 XP_004291459.2 PREDICTED: RNA-dependent RNA polymerase 6 isoform... 593 0.0 KQK20564.1 hypothetical protein BRADI_1g55350 [Brachypodium dist... 577 0.0 XP_010696115.1 PREDICTED: RNA-dependent RNA polymerase 6 [Beta v... 584 0.0 XP_018822243.1 PREDICTED: RNA-dependent RNA polymerase 6 [Juglan... 584 0.0 XP_019173988.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ipomoe... 583 0.0 XP_002324295.1 SILENCING DEFECTIVE 1 family protein [Populus tri... 583 0.0 XP_011026450.1 PREDICTED: RNA-dependent RNA polymerase 6-like [P... 582 0.0 XP_009616479.1 PREDICTED: RNA-dependent RNA polymerase 6, partia... 573 0.0 XP_006645957.1 PREDICTED: probable RNA-dependent RNA polymerase ... 576 0.0 CAR47810.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 578 0.0 AAU21242.1 putative RNA-dependent RNA polymerase SDE1 [Nicotiana... 578 0.0 XP_019260524.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicoti... 578 0.0 XP_009758053.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicoti... 578 0.0 ACA13601.1 RNA-dependent RNA polymerase [Nicotiana attenuata] 578 0.0 >AJP06347.1 RDR6 [Pinus tabuliformis] Length = 1189 Score = 700 bits (1806), Expect = 0.0 Identities = 353/623 (56%), Positives = 442/623 (70%), Gaps = 32/623 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKWIR 1597 LS R G+TME+A YF + LL E +L+V E V V R + FFT+P++ I Sbjct: 262 LSLRMGYTMEKAMDYFRQNRLLDEKSP---SRNLKVNQEPDVYVSRRVFFFTLPHRPRIH 318 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 FE+ +LLN L+HKGI+NYH + FY ML P+ TP S +ALRHM +Y N ++D Sbjct: 319 FETMFLLNALVHKGIVNYHRITPEFYNMLKPSVTPAKLSILALRHMLAYTNPVFDAFGRF 378 Query: 1416 GRIL----QQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 +L + + LK P I +T+EVRRL+ITPTKAYC PPE+ELSNRVLR ++ +DRF Sbjct: 379 KAVLSWISKNLKLLKNPKIAEETIEVRRLVITPTKAYCLPPEVELSNRVLRHFKKFADRF 438 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAKEGFNDFSANX----------------------- 1138 LRV F+D++M + S L+V +AP+ KE + +A Sbjct: 439 LRVTFMDDNMQAMSSIVLTVPIAPIVKEVSSGSTAYRTAIFKRVKQILHKGFQLCGRYYL 498 Query: 1137 ----SPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTVD 970 S NQLRD SAWFFA G+ IT I+ WMG F K NVAKHAARMGQCFSSTY TV+ Sbjct: 499 FLAFSANQLRDRSAWFFASGEDITVQQIKKWMGNFPKY-NVAKHAARMGQCFSSTYCTVE 557 Query: 969 VGRMQFREIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGVVS 790 V Q ++ DI+R GY FSDGIGKI+P LA EV + LQLN NPPSAFQIR+GGYKGVV+ Sbjct: 558 VPSKQVEDLPDIKRKGYDFSDGIGKITPVLAREVAQMLQLNFNPPSAFQIRYGGYKGVVA 617 Query: 789 TWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKVFR 610 TW E G +KL LRPSM KF+ +H LEII+WTRFLP +LN++IITLLS+L V D F+ Sbjct: 618 TWAAESGCKFKLSLRPSMKKFESEHTMLEIITWTRFLPCFLNKQIITLLSSLLVPDSAFQ 677 Query: 609 DLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTAIR 430 +LQ SMV +L +MLE EVAFD+LT+SC+G L NTAA+M+ AGFT + EPHLKD+L+ IR Sbjct: 678 NLQYSMVEKLSQMLENVEVAFDVLTTSCTGDLQNTAAIMLSAGFTSQSEPHLKDMLSCIR 737 Query: 429 AVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDEQS 250 AVQL++LL K RIFVP+GRWL+GCLDE+G+LEYG+CFI+ S L+ CF+KHG + E+ Sbjct: 738 AVQLEELLTKCRIFVPQGRWLMGCLDEIGELEYGQCFIKVSGPPLEGCFLKHGSSSGERK 797 Query: 249 NDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGSDL 70 T+V GKV++AKNPCLHPGD+RILEAVD P L+H+VDCLVFPQ G RPHPNEASGSDL Sbjct: 798 TSSTIVRGKVVVAKNPCLHPGDVRILEAVDAPSLHHLVDCLVFPQNGHRPHPNEASGSDL 857 Query: 69 DGDTYFVSWEPSLIPPRGESWDP 1 D D YFVSW+ SL+PP GESW+P Sbjct: 858 DDDIYFVSWDSSLVPPSGESWEP 880 >XP_006842072.1 PREDICTED: RNA-dependent RNA polymerase 6 [Amborella trichopoda] ERN03747.1 hypothetical protein AMTR_s00078p00055040 [Amborella trichopoda] Length = 1207 Score = 602 bits (1553), Expect = 0.0 Identities = 321/625 (51%), Positives = 424/625 (67%), Gaps = 37/625 (5%) Frame = -2 Query: 1770 SPRTGHTMEQAKRYFSRYHLLGETV-ERVF---DSSLRVRPE-GHVVPRGLLFFTIPNQK 1606 SPR G ME+A+ YF +L V ++V D +V E G + P FF++ Q+ Sbjct: 276 SPRYGLKMEKARDYFRECRILEHGVLQKVLGPQDYPPKVSTEPGFMKPMRNHFFSVNIQE 335 Query: 1605 WIRFESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPC 1426 + FE YL+ L+HKGI+N H L F+ +L S + +T ALRHM+S ++D Sbjct: 336 GLSFEVVYLVTCLVHKGIINQHRLCKEFFDLLRSQSPEV--NTAALRHMYSCHRPVFDAY 393 Query: 1425 VELGRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVS 1258 EL + L+ R +K I D++EVRRL+ITPT A C PP++ELSNRVLR YR +S Sbjct: 394 KELKTVQEWLLKNPRLVKETHIPEDSVEVRRLMITPTGAQCLPPQVELSNRVLRNYREIS 453 Query: 1257 DRFLRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFNDFSA 1144 DRF+RV F DE + L SG LS+ AP+ K+ GFN Sbjct: 454 DRFIRVTFTDEGLQTLNSGVLSIYTAPIVKDFSHSKTAQKTAIFRRVRSIAFDGFNLCGR 513 Query: 1143 NX-----SPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYS 979 S NQLRD SAWFFAD + TA+ IRSWMGKF NVAK AARMG CFSSTY+ Sbjct: 514 RYLFLAFSSNQLRDRSAWFFADTEKTTADSIRSWMGKFTD-ENVAKCAARMGMCFSSTYA 572 Query: 978 TVDVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYK 802 TV+ + ++ +I+RNGY FSDGIGKI+P+LA +V +L+L+ NPP A+Q+R+ G K Sbjct: 573 TVEFDQKDVNFKLAEIKRNGYVFSDGIGKITPELATQVASKLKLSENPPCAYQVRYAGCK 632 Query: 801 GVVSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKD 622 GV+ TWP + KL +RPSM KF+ H LE+I+WTRF P YLNR+IITLLS L V + Sbjct: 633 GVIVTWPRDG--KAKLSIRPSMFKFESKHTMLEVITWTRFQPGYLNRQIITLLSTLKVPN 690 Query: 621 KVFRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLL 442 + F +LQ+SMVS L ++L EVA ++T+SC G NTAA+M+ AGFTP+ EPHL+++L Sbjct: 691 EAFLELQDSMVSDLSQILVNGEVAHKVVTNSC-GEQANTAAIMLSAGFTPQTEPHLREML 749 Query: 441 TAIRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTF 262 + IRA QL DLL K RIF P GRWL+GCLDE+G+LE+G+CFI+ S+ SL++CF+KHG +F Sbjct: 750 SCIRAAQLGDLLAKARIFNPDGRWLMGCLDELGELEHGQCFIQVSSPSLENCFIKHGKSF 809 Query: 261 DEQSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEAS 82 ++ ++ V+TG V++AKNPCLHPG+IR+LEAVD+P L+H+VDCLVFPQKG RPH NEAS Sbjct: 810 SKRKHNVKVITGTVVVAKNPCLHPGEIRVLEAVDVPGLHHLVDCLVFPQKGDRPHTNEAS 869 Query: 81 GSDLDGDTYFVSWEPSLIPPRGESW 7 GSDLDGDTYFV+W +L+PP G+SW Sbjct: 870 GSDLDGDTYFVTWNETLVPPSGKSW 894 >XP_006842073.1 PREDICTED: RNA-dependent RNA polymerase 6 [Amborella trichopoda] ERN03748.1 hypothetical protein AMTR_s00078p00056260 [Amborella trichopoda] Length = 1207 Score = 600 bits (1546), Expect = 0.0 Identities = 322/626 (51%), Positives = 422/626 (67%), Gaps = 38/626 (6%) Frame = -2 Query: 1770 SPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPE-----GHVVPRGLLFFTIPNQK 1606 SPR G E+A+ YF +L V + SL P+ G + FF++ Q+ Sbjct: 276 SPRHGLIREKARDYFRECRILEHEVLQKDLGSLGYPPKVTTEHGFMEQMRDHFFSVNIQQ 335 Query: 1605 WIRFESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPC 1426 + FE YL+ L+HKGI+N H L F+ +L S+ + +T ALRHM+S ++D Sbjct: 336 GLCFEIVYLVTCLVHKGIINQHRLCKEFFDLLRSQSSEV--NTAALRHMYSCRRPVFDAY 393 Query: 1425 VELGRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVS 1258 +L + L+ R LK I +++EVRRL+ITPT A C PP++ELSNRVLR YR +S Sbjct: 394 RKLETVHEWLLKNPRLLKETHIPEESVEVRRLMITPTGAQCLPPQVELSNRVLRNYREIS 453 Query: 1257 DRFLRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFN---- 1156 DRF+RV F DE + L SG LS+ AP+ K+ GFN Sbjct: 454 DRFIRVTFTDEGLQTLNSGVLSIYTAPIVKDFSHIKPSQKTTIFRRVRSIAFDGFNLCGR 513 Query: 1155 --DFSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTY 982 F A S NQLRD SAWFFAD + TA+ IRSWMGKF NVAK AARMG CFSSTY Sbjct: 514 RYSFLA-FSSNQLRDRSAWFFADTEKTTADSIRSWMGKFTD-KNVAKCAARMGMCFSSTY 571 Query: 981 STVDVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGY 805 +TV+V + ++ +IERNGY FSDGIGKI+P+LA +V +L+L+ NPP A+Q+R+ G Sbjct: 572 ATVEVDQKDVNFKLAEIERNGYVFSDGIGKITPELATQVASKLKLSENPPCAYQVRYAGC 631 Query: 804 KGVVSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVK 625 KGV+ TWP + KL +RPSM KF H LE+I+WTRF P YLNR+IITLLS L V Sbjct: 632 KGVIVTWPGDG--KAKLSIRPSMVKFQSKHSILEVITWTRFQPGYLNRQIITLLSTLKVP 689 Query: 624 DKVFRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDL 445 ++ F +LQ+SMVS L ++L EVA ++T+SC G NTAA+M+ AGFTP+ EPHL+++ Sbjct: 690 NEAFLELQDSMVSDLSQILVNTEVAHKVVTNSC-GEQANTAAIMLSAGFTPQTEPHLREM 748 Query: 444 LTAIRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCT 265 L+ IRA QL DLL K RIF P GRWL+GCLDE+G+LE+G+CFI+ S+ SL++CF+KHG + Sbjct: 749 LSCIRAAQLGDLLAKARIFNPDGRWLMGCLDELGELEHGQCFIQVSSPSLENCFIKHGKS 808 Query: 264 FDEQSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEA 85 F ++ ++ V+TG V+IAKNPCLHPG+IR+LEAVD+P L+H+VDCLVFPQKG RPH NEA Sbjct: 809 FSKRKHNVKVITGTVVIAKNPCLHPGEIRVLEAVDVPGLHHLVDCLVFPQKGDRPHTNEA 868 Query: 84 SGSDLDGDTYFVSWEPSLIPPRGESW 7 SGSDLDGDTYFV+W L+PP G+SW Sbjct: 869 SGSDLDGDTYFVTWNEKLVPPSGKSW 894 >XP_018847783.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia] XP_018847785.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia] XP_018847786.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia] XP_018847787.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia] XP_018847788.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Juglans regia] Length = 931 Score = 586 bits (1511), Expect = 0.0 Identities = 316/625 (50%), Positives = 410/625 (65%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKWIR 1597 + PR G + + Y + E + LR+R E +P F+ I ++ I Sbjct: 276 IPPRHGVKLRRTMEYLKEQRVH----EICLEKPLRIRDEPEFGLPLSDPFYCIQYKQGIA 331 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 FE +L+N ++HKGI + H L+D F+ +L S P + AL+H+ SY +++ L Sbjct: 332 FEIMFLVNAVLHKGIFSQHQLSDNFFSLL--RSQPKEVNIAALKHICSYRRPVFNALRRL 389 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 + L+ + K+P D +EVRRL+ITP KAYC PPE+ELSNRVLR+Y+ V+DRF Sbjct: 390 KTVQDWLLRNPKLFKSPRRLDDIVEVRRLVITPAKAYCLPPEVELSNRVLRKYKGVADRF 449 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAK----------------------EGFN------D 1153 LRV F+DE M + S L+ VAP+ K GF+ Sbjct: 450 LRVTFMDEGMQTMNSNVLNSYVAPIVKLITSNSYPQKTKIFQRVNTILKSGFHVCGREYS 509 Query: 1152 FSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 F A S NQLRD SAWFFA+ +IR WMGKF + N+AK AARMGQCFSSTY+TV Sbjct: 510 FLA-FSSNQLRDRSAWFFAEDGKTNVVNIRKWMGKFTQ-KNIAKCAARMGQCFSSTYATV 567 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V + E+ DIERN Y FSDGIG I+PDLA +V +L+L+ NPP A+QIR+ G+KGV Sbjct: 568 EVPPKEVNPELPDIERNNYNFSDGIGMITPDLANKVAEKLKLDGNPPCAYQIRYAGFKGV 627 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP + G +L LRPSM+KF DH TLEI SWTRF P +LNR+I+TLLS L V D++ Sbjct: 628 VACWPAK-GDGVRLSLRPSMNKFISDHTTLEICSWTRFQPGFLNRQIVTLLSTLNVPDEI 686 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F +Q+SM+SRL +ML +VAFD+LT+SC+ N AA+M+ AGF P+ EPHL+ +LT Sbjct: 687 FWKMQDSMLSRLNQMLVDTDVAFDVLTASCAEQ-GNAAAIMLSAGFEPQSEPHLRGMLTC 745 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 IRA Q L K RIFVP GRWL+GCLDE+G LE G+CFI+ ST SL++CF KHG F E Sbjct: 746 IRAAQHWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSTPSLENCFSKHGSRFTE 805 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 ++N+ V+ G V+IAKNPCLHPGDIRILEAVD P L+H+ DCLVFPQKG RPH +EASGS Sbjct: 806 KANNLQVIKGHVVIAKNPCLHPGDIRILEAVDAPGLHHLFDCLVFPQKGDRPHTDEASGS 865 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +LIPP ESW P Sbjct: 866 DLDGDLYFVTWDENLIPPNKESWPP 890 >XP_018678117.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase SHL2 [Musa acuminata subsp. malaccensis] Length = 1199 Score = 593 bits (1530), Expect = 0.0 Identities = 322/625 (51%), Positives = 421/625 (67%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPE-GHVVPRGLLFFTIPNQKWIR 1597 LSPR G ME++ Y R H + E R L VR E G+ FF I N+K I Sbjct: 277 LSPRFGPKMERSLAYL-REHGVAENRPRC---RLVVRDEPGYGAHMSDPFFCIQNKKGIN 332 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 F + +L+N L+H+GI+N H L++ F+ +L S + + AL H+ SY + I+D L Sbjct: 333 FATMFLVNALVHRGIVNQHQLSEEFFSLLRCQSEMV--NGTALMHILSYKHPIFDAPGRL 390 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 + L+ + L+ D +EVR+L+ITPTKAYC PPE+ELSNRVLR+Y+ V+DRF Sbjct: 391 KLVQEWLLRNPKLLRHSKFSDDIIEVRKLVITPTKAYCLPPEVELSNRVLRKYKEVADRF 450 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFNDFSANXS 1135 LRV F DE M +L S L+ VAP+ ++ GF+ + S Sbjct: 451 LRVTFTDEGMQQLNSNVLNYYVAPIVRDITSNSFPQKTTVFKRVKDILTNGFHLYGQKYS 510 Query: 1134 -----PNQLRDNSAWFFAD-GDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 NQLRD SAWFFA+ SIT IR+WMGKF NVAK AARMGQCFSSTY+TV Sbjct: 511 FLAFSSNQLRDRSAWFFAEVSGSITVATIRNWMGKFSN-KNVAKCAARMGQCFSSTYATV 569 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V + E+EDI+RNGY FSDGIGKI+P+LALEV ++L L +PPSA+QIR+ G KGV Sbjct: 570 NVTPNEVNSELEDIKRNGYVFSDGIGKITPELALEVAQKLHLTEDPPSAYQIRYAGCKGV 629 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP KL LRPSM+KF+ +H LE++SWTRF P +LNR+I+TLLS+L V D V Sbjct: 630 VAVWPGNDD-GIKLSLRPSMNKFESNHTILEVVSWTRFQPGFLNRQIVTLLSSLKVPDSV 688 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F +Q++M+ +L ++L VAF+ILT+SC+ NTAA+M+ AGF P+ EPHLK +L+ Sbjct: 689 FERMQDTMILKLNQILHDTNVAFEILTTSCAEQ-GNTAAMMLSAGFRPQSEPHLKAMLSC 747 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 IR+ QL DLL K +IFVPKGR L+GCLDE+G LE+G+CFI+AST SL++C KHG F Sbjct: 748 IRSTQLGDLLAKTKIFVPKGRLLMGCLDELGVLEHGQCFIQASTPSLENCLSKHGSRFSA 807 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 N+ V+ G V + KNPCLHPGDIRILEAVD+PEL+H+VDCL+FPQ+G RPH NEASGS Sbjct: 808 SQNNRQVIVGTVAVGKNPCLHPGDIRILEAVDVPELHHLVDCLIFPQRGDRPHTNEASGS 867 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +L+PP +SW P Sbjct: 868 DLDGDLYFVTWDENLLPPGKKSWVP 892 >XP_011459183.1 PREDICTED: RNA-dependent RNA polymerase 6 isoform X2 [Fragaria vesca subsp. vesca] Length = 1197 Score = 593 bits (1529), Expect = 0.0 Identities = 319/625 (51%), Positives = 419/625 (67%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPE-GHVVPRGLLFFTIPNQKWIR 1597 + PR G +++A Y + E R++ E G P F+I QK I Sbjct: 274 IPPRHGAKLKKAMIYLKERRVQ----ELFIKKPPRIQDEPGFGNPMSDALFSIHYQKNIS 329 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 F+ +L+N ++HKGILN H L++ F+ +L + P + AL+H+ SY + ++D L Sbjct: 330 FDILFLVNAVMHKGILNQHQLSESFFDLL--RNQPEEINVAALKHLCSYKHPVFDASKRL 387 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 + L+ + +K P D EVRRL+ITPTKAYC PPE+ELSNRVLR+Y+ V+DRF Sbjct: 388 KLVQEWLLRNPKLIKNPKRLDDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRF 447 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFN------D 1153 LRV F+DE M + S ++ VAP+ KE GF+ Sbjct: 448 LRVTFMDEGMQTMNSNVMNSYVAPIVKEITENTFPQKTKVYVRIRAILMNGFHLCGRKYS 507 Query: 1152 FSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 F A S NQLRD SAWFFA+ +I+ I++WMG+F NVAK AARMGQCFSSTY+TV Sbjct: 508 FLA-FSSNQLRDRSAWFFAEDKTISIQGIKNWMGRFTN-RNVAKCAARMGQCFSSTYATV 565 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V Q E+ DIERNGY FSDGIG+I+PDLA+EV +L+L+ +PPSA+QIR+GG KGV Sbjct: 566 EVPSTQVNHELPDIERNGYVFSDGIGRITPDLAMEVAEKLKLDRDPPSAYQIRYGGCKGV 625 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP G ++L LR SM+KF DH TLEI SWTR P +LNR+IITLLSAL V D++ Sbjct: 626 VACWP-STGDGFRLSLRRSMNKFASDHTTLEICSWTRLQPGFLNRQIITLLSALNVPDEI 684 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F +Q +MVS+L++ML +VAFD+LT+SC+ N+AA+M+ AGF P+ EPHL+ +LT Sbjct: 685 FWTMQETMVSKLKQMLVDTDVAFDVLTASCAEQ-GNSAAIMLSAGFKPQTEPHLRGMLTC 743 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 I+A QL L K RIFVP GRWL+GCLDE+G LE G+CF++ ST SL++CF KHG FD+ Sbjct: 744 IQAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEQGQCFVQVSTPSLENCFAKHGSRFDQ 803 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 + V+ G V++AKNPCLHPGDIRILEAVD P L+H+ DCLVFPQKG RPH +EASGS Sbjct: 804 TDKNLQVIKGFVVVAKNPCLHPGDIRILEAVDAPGLHHLHDCLVFPQKGHRPHTDEASGS 863 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +LIPPR +SW P Sbjct: 864 DLDGDLYFVTWDENLIPPRKKSWQP 888 >XP_004291459.2 PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Fragaria vesca subsp. vesca] Length = 1200 Score = 593 bits (1529), Expect = 0.0 Identities = 319/625 (51%), Positives = 419/625 (67%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPE-GHVVPRGLLFFTIPNQKWIR 1597 + PR G +++A Y + E R++ E G P F+I QK I Sbjct: 277 IPPRHGAKLKKAMIYLKERRVQ----ELFIKKPPRIQDEPGFGNPMSDALFSIHYQKNIS 332 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 F+ +L+N ++HKGILN H L++ F+ +L + P + AL+H+ SY + ++D L Sbjct: 333 FDILFLVNAVMHKGILNQHQLSESFFDLL--RNQPEEINVAALKHLCSYKHPVFDASKRL 390 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 + L+ + +K P D EVRRL+ITPTKAYC PPE+ELSNRVLR+Y+ V+DRF Sbjct: 391 KLVQEWLLRNPKLIKNPKRLDDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRF 450 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFN------D 1153 LRV F+DE M + S ++ VAP+ KE GF+ Sbjct: 451 LRVTFMDEGMQTMNSNVMNSYVAPIVKEITENTFPQKTKVYVRIRAILMNGFHLCGRKYS 510 Query: 1152 FSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 F A S NQLRD SAWFFA+ +I+ I++WMG+F NVAK AARMGQCFSSTY+TV Sbjct: 511 FLA-FSSNQLRDRSAWFFAEDKTISIQGIKNWMGRFTN-RNVAKCAARMGQCFSSTYATV 568 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V Q E+ DIERNGY FSDGIG+I+PDLA+EV +L+L+ +PPSA+QIR+GG KGV Sbjct: 569 EVPSTQVNHELPDIERNGYVFSDGIGRITPDLAMEVAEKLKLDRDPPSAYQIRYGGCKGV 628 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP G ++L LR SM+KF DH TLEI SWTR P +LNR+IITLLSAL V D++ Sbjct: 629 VACWP-STGDGFRLSLRRSMNKFASDHTTLEICSWTRLQPGFLNRQIITLLSALNVPDEI 687 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F +Q +MVS+L++ML +VAFD+LT+SC+ N+AA+M+ AGF P+ EPHL+ +LT Sbjct: 688 FWTMQETMVSKLKQMLVDTDVAFDVLTASCAEQ-GNSAAIMLSAGFKPQTEPHLRGMLTC 746 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 I+A QL L K RIFVP GRWL+GCLDE+G LE G+CF++ ST SL++CF KHG FD+ Sbjct: 747 IQAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEQGQCFVQVSTPSLENCFAKHGSRFDQ 806 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 + V+ G V++AKNPCLHPGDIRILEAVD P L+H+ DCLVFPQKG RPH +EASGS Sbjct: 807 TDKNLQVIKGFVVVAKNPCLHPGDIRILEAVDAPGLHHLHDCLVFPQKGHRPHTDEASGS 866 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +LIPPR +SW P Sbjct: 867 DLDGDLYFVTWDENLIPPRKKSWQP 891 >KQK20564.1 hypothetical protein BRADI_1g55350 [Brachypodium distachyon] Length = 963 Score = 577 bits (1487), Expect = 0.0 Identities = 314/629 (49%), Positives = 405/629 (64%), Gaps = 38/629 (6%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFS--RYHLLGETVERVFDSSLRVRPEGHVV-PRGLLFFTIPNQKW 1603 ++PR M++A Y R ++ TV L+VR E P LFF + + + Sbjct: 283 VAPRKWIMMDRALAYMKGQRVLIVESTVWSGPRRGLKVRDEPEFEEPMQDLFFCVQHAEG 342 Query: 1602 IRFESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCV 1423 ++F +L+N L+HKGI+N H L F +L + + AL+ +++ Sbjct: 343 LKFPVLFLVNALVHKGIINQHQLTPEFLSLLSGRDDDV--NVAALKEFWGDKFPVFNARK 400 Query: 1422 ELG----RILQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSD 1255 L R+ + L++ +G D +EVRRL+ITPT A C PP+IELSNRVLR Y V+D Sbjct: 401 RLEHAHRRVASNPKLLRSGKVGDDNVEVRRLVITPTSASCLPPQIELSNRVLRHYHEVAD 460 Query: 1254 RFLRVCFLDESMDKLGSGALSVNVAPVAK----------------------EGFN----- 1156 RFLRV F+DE M L + L+ AP+ K EGF+ Sbjct: 461 RFLRVTFMDEGMQSLNNNVLNFYTAPIVKALRPNSFQQKTAVYKRVKMFLTEGFHMCGRK 520 Query: 1155 -DFSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYS 979 F A S NQLRD SAWFFA+ T IR WMG+F NVAKHAARMGQCFSSTY+ Sbjct: 521 YSFLA-FSSNQLRDRSAWFFAEDSKTTVESIRKWMGRFTS-KNVAKHAARMGQCFSSTYA 578 Query: 978 TVDVGRMQFRE-IEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYK 802 TV V + E +ED+ERN YTFSDGIGKI+PDLA+EV +LQL +PPSA+QIR+ GYK Sbjct: 579 TVMVKPDEVNESLEDVERNNYTFSDGIGKITPDLAMEVAEKLQLMDSPPSAYQIRYAGYK 638 Query: 801 GVVSTWPIEPGMN--YKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGV 628 GV++ W G N +L LRPSM KF+ H LE++SWTRF P +LNR+II LLS+L V Sbjct: 639 GVIAVWQ---GNNNGIRLSLRPSMKKFESKHSVLEVVSWTRFQPGFLNRQIILLLSSLNV 695 Query: 627 KDKVFRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKD 448 D +F +Q SM+ L ++L +VAF+++T+SC+ NTAA+M+ AGF P EPHL+ Sbjct: 696 SDDIFSQMQESMLFNLNKILLDSDVAFEVVTTSCAEQ-GNTAALMLSAGFGPGTEPHLRG 754 Query: 447 LLTAIRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGC 268 +L AIR+ QL DLL K RIFVPKGRWL+GCLDE+G LE G+CF++AS SL CF+KHG Sbjct: 755 MLLAIRSAQLQDLLEKTRIFVPKGRWLMGCLDELGVLEQGQCFVQASAASLDRCFLKHGS 814 Query: 267 TFDEQSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNE 88 F N +V G V+IAKNPCLHPGD+RILEAVD+PEL+H+VDCLVFPQKG RPHPNE Sbjct: 815 RFSANKNTDIIV-GTVVIAKNPCLHPGDVRILEAVDVPELHHLVDCLVFPQKGERPHPNE 873 Query: 87 ASGSDLDGDTYFVSWEPSLIPPRGESWDP 1 ASGSDLDGD YFV+W+ L+PP +SW+P Sbjct: 874 ASGSDLDGDLYFVTWDEKLVPPGKKSWNP 902 >XP_010696115.1 PREDICTED: RNA-dependent RNA polymerase 6 [Beta vulgaris subsp. vulgaris] KMT18923.1 hypothetical protein BVRB_2g030230 [Beta vulgaris subsp. vulgaris] Length = 1208 Score = 584 bits (1506), Expect = 0.0 Identities = 324/629 (51%), Positives = 406/629 (64%), Gaps = 38/629 (6%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHVVPRGLL--FFTIPNQKWI 1600 LSPR + + +Y + E +++ LRV E + R L FF + ++ + Sbjct: 275 LSPRNRGKLNRVIKYLMERRVSVEYPKQL----LRVTDEHNHCLRNLSDPFFCVQYEEGV 330 Query: 1599 RFESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVE 1420 FE ++LN +HKGI+N + L+ +F+ +L S + + ALRH+ SY ++D Sbjct: 331 PFEVTFMLNAAVHKGIINEYQLSGKFFDLLRTQSAEV--NLAALRHICSYKRPVFDAYKR 388 Query: 1419 LGRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDR 1252 L + L+ R L+ P D +EVRRLIITPTKAYC PPE+ELSNRVLR YR VSDR Sbjct: 389 LKLVHDWLLRNPRLLRDPKKLSDIVEVRRLIITPTKAYCLPPEVELSNRVLRHYRDVSDR 448 Query: 1251 FLRVCFLDESMDKLGSGALSVNVAPVAK----------------------EGFN------ 1156 FLRV F+DE+M L S LS P+ K +GF Sbjct: 449 FLRVTFMDEAMQMLNSNVLSYYAPPIVKMITSNTYLQRTSVFKRVNVMLKQGFKLCGRTY 508 Query: 1155 DFSANXSPNQLRDNSAWFFADGDS---ITANDIRSWMGKFHKITNVAKHAARMGQCFSST 985 F A S NQLRD SAWFFA+ +T IR+WMGKF NVAK AARMGQCFSST Sbjct: 509 TFLA-FSSNQLRDRSAWFFAEDKKDKRLTVTSIRNWMGKFTN-RNVAKCAARMGQCFSST 566 Query: 984 YSTVDVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGG 808 Y+TV+V E+ DIERNGY FSDGIG I+PDLALEV +LQ+ NPP A+QIRF G Sbjct: 567 YATVEVSPDHVESELPDIERNGYVFSDGIGIITPDLALEVAEKLQMKDNPPCAYQIRFAG 626 Query: 807 YKGVVSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGV 628 KGVV+ WP + N ++ LRPSM+KF H +E+ SWTRF P +LNR+IITLLSAL V Sbjct: 627 CKGVVACWPTKND-NIRIYLRPSMNKFQSRHTVVEVCSWTRFQPGFLNRQIITLLSALDV 685 Query: 627 KDKVFRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKD 448 D VF +Q +M+S+L +ML EVAFD+LT+SC+ NTAA+M+ AGF P+ EPHL+ Sbjct: 686 SDDVFWRMQETMISKLDQMLLNTEVAFDVLTASCAEQ-GNTAAIMLSAGFKPQTEPHLRG 744 Query: 447 LLTAIRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGC 268 +L+ IRA QL DL K RIFV GRWL+GCLDE G LE G+CFI+ S SL++CF KHG Sbjct: 745 MLSCIRAAQLGDLREKARIFVQSGRWLMGCLDEAGVLEQGQCFIQVSNPSLQNCFSKHGS 804 Query: 267 TFDEQSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNE 88 F E D ++ G VI+AKNPCLHPGDIRILEAVD P+L+H+ DCL+FPQKG RPH NE Sbjct: 805 RFSEVKKDLQIIKGLVIVAKNPCLHPGDIRILEAVDSPKLHHLFDCLIFPQKGERPHTNE 864 Query: 87 ASGSDLDGDTYFVSWEPSLIPPRGESWDP 1 ASGSDLDGD YFVSW+ +LIPP SW P Sbjct: 865 ASGSDLDGDLYFVSWDDNLIPPSKRSWIP 893 >XP_018822243.1 PREDICTED: RNA-dependent RNA polymerase 6 [Juglans regia] XP_018822244.1 PREDICTED: RNA-dependent RNA polymerase 6 [Juglans regia] XP_018822245.1 PREDICTED: RNA-dependent RNA polymerase 6 [Juglans regia] Length = 1199 Score = 584 bits (1505), Expect = 0.0 Identities = 315/625 (50%), Positives = 411/625 (65%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKWIR 1597 + PR G + + Y + E + LR+R E +P FF I ++ I Sbjct: 276 IPPRHGVKLRRTMEYLKEQRVH----EICLEKPLRIRDEPEFGLPLSDPFFCIQYKQGIA 331 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 FE +L+N ++HKGI + H L+D F+ +L S P + AL+H+ SY +++ L Sbjct: 332 FEIMFLVNAVLHKGIFSQHQLSDNFFSLL--RSQPKEVNIAALKHICSYRRPVFNALRRL 389 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 + L+ + K+P D +EVRRL+ITP KAYC PPE+ELSNRVLR+Y+ V+DRF Sbjct: 390 KTVQDWLLRNPKLFKSPRRLDDIVEVRRLVITPAKAYCLPPEVELSNRVLRKYKGVADRF 449 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAK----------------------EGFN------D 1153 LRV F+DE M + S L+ VAP+ K GF+ Sbjct: 450 LRVTFMDEGMQTMNSNVLNSYVAPIVKLITSNSYPQKTKIFQRVNTILKSGFHVCGREYS 509 Query: 1152 FSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 F A S NQLRD SAWFFA+ +IR+WMGKF + N+AK AARMGQCFSSTY+TV Sbjct: 510 FLA-FSSNQLRDRSAWFFAEDGKTNVVNIRNWMGKFTQ-KNIAKCAARMGQCFSSTYATV 567 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V + ++ D+ERN Y FSDGIG I+PDLA +V +L+L+ NPP A+QIR+ G+KGV Sbjct: 568 EVPPKEVNPKLPDVERNDYIFSDGIGMITPDLANKVAEKLKLDGNPPCAYQIRYAGFKGV 627 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP + G +L LRPSM+KF DH TLEI SWTRF P +LNR+I+TLLS L V D++ Sbjct: 628 VACWPAK-GDGVRLSLRPSMNKFISDHTTLEICSWTRFQPGFLNRQIVTLLSTLNVPDEI 686 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F +Q+SM+SRL +ML +VAFD+LT+SC+ N AA+M+ AGF P+ EPHL+ +LT Sbjct: 687 FWKMQDSMLSRLNQMLVDTDVAFDVLTASCAEQ-GNAAAIMLSAGFEPQSEPHLRGMLTC 745 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 IRA Q L K RIFVP GRWL+GCLDE+G LE G+CFI+ ST SL++CF KHG F E Sbjct: 746 IRAAQHWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSTPSLENCFSKHGSRFTE 805 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 ++N+ V+ G V+IAKNPCLHPGDIRILEAVD P L+H+ DCLVFPQKG RPH +EASGS Sbjct: 806 KANNLQVIKGHVVIAKNPCLHPGDIRILEAVDDPGLHHLFDCLVFPQKGDRPHTDEASGS 865 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +LIPP ESW P Sbjct: 866 DLDGDLYFVTWDENLIPPSKESWPP 890 >XP_019173988.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ipomoea nil] XP_019173989.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ipomoea nil] Length = 1196 Score = 583 bits (1503), Expect = 0.0 Identities = 319/626 (50%), Positives = 410/626 (65%), Gaps = 35/626 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHVVPRGLLFFTIPNQKWIRF 1594 + PR G T +A YF + + + +L+VR + FF I N+K + F Sbjct: 275 IPPRKGPTFNKAMEYFGKQRVCIDYPRH----NLQVRDKCDFKAPIPPFFCIQNEKGLSF 330 Query: 1593 ESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVELG 1414 +LLN ++HKGI N H + D F+ +L + P + AL+H+ +Y +Y+ L Sbjct: 331 PVLFLLNAVLHKGIFNQHQMTDEFFTLL--RNQPENVNLAALKHIWAYKWPMYEASKAL- 387 Query: 1413 RILQQYRHLKAPFIGP------DTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDR 1252 + Q LK P + D EVRRLIITPTKAYC PPE+ELSNRVLR+YR +SDR Sbjct: 388 -MFVQKWLLKNPKLIEGRKELDDIAEVRRLIITPTKAYCLPPEVELSNRVLRKYRDISDR 446 Query: 1251 FLRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFN------ 1156 FLRV F+DE M L LS AP+ K+ GF Sbjct: 447 FLRVTFMDEGMRPLNRNVLSFYPAPIVKDITKASIPQKTVVFMRVKNILKRGFTLCDRHY 506 Query: 1155 DFSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYST 976 F A SPNQLRD SAWFFADG I +I++WMG+F NVAK AARMG CFSSTY+T Sbjct: 507 SFLA-FSPNQLRDRSAWFFADGPDIRVPNIKTWMGRFTN-KNVAKCAARMGLCFSSTYAT 564 Query: 975 VDVGRMQFRE-IEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKG 799 +V + E + +IERN Y FSDGIG I+PDLA +V +LQL++NPP A+QIR+ G+KG Sbjct: 565 FNVQSSEVDEKLPEIERNEYIFSDGIGIITPDLAAKVAEKLQLSVNPPCAYQIRYSGFKG 624 Query: 798 VVSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDK 619 VV+ WP L LRPSM KF+ HR LEI SWTRF P +LNR+I+TLLSAL V+D+ Sbjct: 625 VVACWPGRID-GVHLYLRPSMKKFESTHRVLEICSWTRFQPGFLNRQIVTLLSALAVEDQ 683 Query: 618 VFRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLT 439 +F +Q +M+SRL +M+ +VAFDILT SC+ NTAA+M+ AGF P+ EPHL+ +L Sbjct: 684 IFWKMQETMISRLNQMVVDADVAFDILTGSCAEQ-GNTAAIMLSAGFKPQTEPHLQGMLA 742 Query: 438 AIRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFD 259 +IRA QL DL + RIFVP GRWL+GCLDE+G+LE G+CFI+ S+ SL++CFVKHG F+ Sbjct: 743 SIRAAQLSDLRERARIFVPSGRWLMGCLDELGELEQGQCFIQVSSASLENCFVKHGSKFE 802 Query: 258 EQSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASG 79 + N V+ G V+IAKNPCLHPGD+RIL+AVDIP L+H+ DCLVFPQKG+RPH NEASG Sbjct: 803 ARKN-LKVIQGLVVIAKNPCLHPGDVRILKAVDIPRLHHLYDCLVFPQKGNRPHTNEASG 861 Query: 78 SDLDGDTYFVSWEPSLIPPRGESWDP 1 SDLDGD YFV+W+ +LIPP +SW P Sbjct: 862 SDLDGDLYFVTWDENLIPPSKQSWMP 887 >XP_002324295.1 SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] EEF02860.1 SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] Length = 1200 Score = 583 bits (1503), Expect = 0.0 Identities = 313/627 (49%), Positives = 414/627 (66%), Gaps = 36/627 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFS--RYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKW 1603 + PR G + +A +Y R +L E R +R+ E +P FF I +++ Sbjct: 274 IPPRHGSKLRKAVKYLKERRVQVLQEENHR---RRIRILDEPDFGMPMSDPFFCIHHKEG 330 Query: 1602 IRFESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCV 1423 I FE +L+N ++HKGI N H L++ F+ +L T + S AL+H+ +Y +++ Sbjct: 331 IAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTEVNVS--ALKHICTYRRPVFNAYR 388 Query: 1422 ELGRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSD 1255 L + L+ K P D +E+RRL+ITPTKAYC PPE+ELSNRVLR+Y+ V+D Sbjct: 389 RLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVAD 448 Query: 1254 RFLRVCFLDESMDKLGSGALSVNVAPVAK----------------------EGFN----- 1156 RFLRV F+DE + ++ S L+ VAP+ + EGF Sbjct: 449 RFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQKTRIFKRVRSILTEGFYLCGRR 508 Query: 1155 -DFSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYS 979 F A S NQLRD SAWFF++ +I+ D++SWMGKF N+AK AARMGQCFSSTY+ Sbjct: 509 YSFLA-FSANQLRDQSAWFFSEERNISVLDVKSWMGKFTN-RNIAKCAARMGQCFSSTYA 566 Query: 978 TVDVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYK 802 T++V + ++ DIERNGY FSDGIG I+PDLA EV +L+L+I+PP A+QIR+ G K Sbjct: 567 TIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRYAGCK 626 Query: 801 GVVSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKD 622 GVV+ WP + G +L LRPSM+KF +H TLEI SWTRF P +LNR+IITLLS L V D Sbjct: 627 GVVACWPGK-GDGVRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNVPD 685 Query: 621 KVFRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLL 442 VF +Q +MVS+L +M +VAFD+LT+SC+ N AA+M+ AGF P +EPHL+ +L Sbjct: 686 AVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQ-GNVAAIMLSAGFKPDREPHLRGML 744 Query: 441 TAIRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTF 262 T +RA QL DL K RIFVP GRWL+GCLDE+G LE G+CFI+ S +SL+ CF+KHG F Sbjct: 745 TCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLEKCFMKHGAKF 804 Query: 261 DEQSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEAS 82 E + V+ G V+IAKNPCLHPGD+R+LEAVD+P L+H+ DCLVFPQKG RPH NEAS Sbjct: 805 SEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPHTNEAS 864 Query: 81 GSDLDGDTYFVSWEPSLIPPRGESWDP 1 GSDLDGD YFV+W+ +LIPP SW P Sbjct: 865 GSDLDGDLYFVTWDENLIPPSKRSWIP 891 >XP_011026450.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica] Length = 1200 Score = 582 bits (1499), Expect = 0.0 Identities = 314/627 (50%), Positives = 413/627 (65%), Gaps = 36/627 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFS--RYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKW 1603 + PR G + +A +Y R +L E R +R+ E +P FF I +++ Sbjct: 274 IPPRHGSKLRKAVKYLKERRVEVLQEENHR---RRIRILDEPDFGMPMSDPFFCIHHKEG 330 Query: 1602 IRFESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCV 1423 I F+ +L+N ++HKGI N H L++ F+ +L T + S AL+H+ +Y +++ Sbjct: 331 IAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTEVNVS--ALKHICTYRRPVFNAYK 388 Query: 1422 ELGRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSD 1255 L + L+ K P D +E+RRL+ITPTKAYC PPE+ELSNRVLR+Y+ V+D Sbjct: 389 RLKAVQEWLLKNPNLFKNPKQLGDIVEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVAD 448 Query: 1254 RFLRVCFLDESMDKLGSGALSVNVAPVAK----------------------EGFN----- 1156 RFLRV F+DE + ++ S L+ VAP+ + EGF Sbjct: 449 RFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFHQKTRIFKRVRSILTEGFYLCGRR 508 Query: 1155 -DFSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYS 979 F A S NQLRD SAWFFA+ +++ DI+SWMGKF N+AK AARMGQCFSSTY+ Sbjct: 509 YSFLA-FSANQLRDQSAWFFAEERNVSVLDIKSWMGKFTN-RNIAKCAARMGQCFSSTYA 566 Query: 978 TVDVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYK 802 T++V + ++ DIERNGY FSDGIG I+PDLA EV +L+L+I+PP A+QIR+ G K Sbjct: 567 TIEVPPEEVNFDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRYAGCK 626 Query: 801 GVVSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKD 622 GVV+ WP + G L LRPSM+KF +H TLEI SWTRF P +LNR+IITLLS L V D Sbjct: 627 GVVACWPGK-GDGVHLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNVPD 685 Query: 621 KVFRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLL 442 VF +Q +MVS+L +M +VAFD+LT+SC+ N AA+M+ AGF P+KEPHL+ +L Sbjct: 686 AVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQ-GNVAAIMLSAGFKPQKEPHLRGML 744 Query: 441 TAIRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTF 262 T +RA QL L K RIFVP GRWL+GCLDE+G LE G+CFI+ S +SL+ CF+KHG F Sbjct: 745 TCVRAAQLWGLREKARIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLEKCFIKHGAKF 804 Query: 261 DEQSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEAS 82 E + VV G V+IAKNPCLHPGD+R+LEAVD+P L+H+ DCLVFPQKG RPH NEAS Sbjct: 805 SEAKKNLQVVKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPHTNEAS 864 Query: 81 GSDLDGDTYFVSWEPSLIPPRGESWDP 1 GSDLDGD YFV+W+ +LIPP SW P Sbjct: 865 GSDLDGDLYFVTWDENLIPPSKRSWIP 891 >XP_009616479.1 PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis] Length = 956 Score = 573 bits (1476), Expect = 0.0 Identities = 318/625 (50%), Positives = 405/625 (64%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKWIR 1597 + PR G + E+A YFS + VE LRV+ E V FF N+ I Sbjct: 32 IRPRNGPSFEKAMAYFSFRRV--PMVEMCNRKMLRVKDEPDFGVSMSDPFFCFQNEG-IS 88 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 F +L+N ++HKGI+N H + + F+ +L + + AL+HM SY + D +L Sbjct: 89 FRVLFLVNAVLHKGIVNQHQMANEFFYLLRSHQEEV--NLAALKHMFSYKWPVNDAIQKL 146 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 I L+ + L D +EVRRL+ITPTKAYC PP +ELSNRVLR Y+ V+DRF Sbjct: 147 AGIQKWLLKNPKLLDRTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 206 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFN------D 1153 LRV F+DE M L L+ A + +E GF+ Sbjct: 207 LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYS 266 Query: 1152 FSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 F A S NQLRD SAWFFA+ I I SWMG+F NVAK AARMGQCFSSTY+TV Sbjct: 267 FLA-FSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSN-RNVAKCAARMGQCFSSTYATV 324 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V + E+ DIERNGY FSDGIG IS DLA+EV +L L++NPPSA+QIR+ G KGV Sbjct: 325 EVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKGV 384 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP + +L LRPSM KFD +H LEI SWTRF P +LNR+I+TLLS+L VKD + Sbjct: 385 VACWPTKND-GIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 443 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F ++Q M+S L +ML +VAFD++T+SC+ NTAA+M+ AGF P+ EPHL+ +L++ Sbjct: 444 FWEMQKEMISGLDKMLVDSDVAFDVITASCAEA-GNTAALMLSAGFKPQSEPHLRGMLSS 502 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 IRA QL DL K RIFVP GRWL+GCLDE+G+LE G+CFI+ S+ SL++CFVKHG F + Sbjct: 503 IRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPKFSD 562 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 + VV G V+IAKNPCLHPGD+RILEAVD+P L H+ DCLVFPQKG RPH NEASGS Sbjct: 563 IKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGS 622 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +LIPP +SW P Sbjct: 623 DLDGDLYFVTWDENLIPPSKKSWIP 647 >XP_006645957.1 PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Oryza brachyantha] Length = 1105 Score = 576 bits (1485), Expect = 0.0 Identities = 305/579 (52%), Positives = 381/579 (65%), Gaps = 35/579 (6%) Frame = -2 Query: 1632 LFFTIPNQKWIRFESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHS 1453 +FF + + + +RF +L+N L+HKGI+N H L F+ +L + + + AL+ Sbjct: 230 VFFCLQHVEGLRFPVLFLVNALVHKGIINQHQLTPEFFSLLRRKADDI--NVAALKDFWG 287 Query: 1452 YGNQIYDPCVELGRILQQYRH---LKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRV 1282 ++D C L + L + L IG D EVRRL+ITPT+AYC PPE+E SNRV Sbjct: 288 DKFPVFDACRRLKKALDRVARNPKLLCSKIGDDNEEVRRLVITPTRAYCLPPEVERSNRV 347 Query: 1281 LRRYRSVSDRFLRVCFLDESMDKLGSGALSVNVAPVAK---------------------- 1168 LRRYR V+DRFLRV F+DE M+ L + L+ AP+ K Sbjct: 348 LRRYREVADRFLRVTFMDEGMEMLNNHVLNSFTAPIVKDLMSNYFQQKTTVYKRVRLLLT 407 Query: 1167 EGFN------DFSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARM 1006 EGF+ F A S NQLRD SAWFFA+ + T IR WMG+F NVAKHAARM Sbjct: 408 EGFHLCGRKYSFLA-FSSNQLRDKSAWFFAEDRNTTVEGIRKWMGRFTS-KNVAKHAARM 465 Query: 1005 GQCFSSTYSTVDVGRMQFREIE----DIERNGYTFSDGIGKISPDLALEVTRRLQLNINP 838 GQCFSSTY+TV MQ E++ DI N Y FSDGIGKI+PDLALEV RLQL NP Sbjct: 466 GQCFSSTYATVT---MQLDEVDENFDDIVHNDYIFSDGIGKITPDLALEVAERLQLTDNP 522 Query: 837 PSAFQIRFGGYKGVVSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNRE 658 PSA+QIR+ G+KGV++ W G +L LRPSM KF+ H LE++SWT+F P +LNR+ Sbjct: 523 PSAYQIRYAGFKGVIAVWQGN-GDGIRLSLRPSMRKFESSHSVLEVVSWTKFQPGFLNRQ 581 Query: 657 IITLLSALGVKDKVFRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGF 478 IITLLS+L V D +F +Q +M+S L +L +VAF++LTS NTAA+M+ AGF Sbjct: 582 IITLLSSLNVPDAIFSQMQETMLSNLNNILSDRDVAFEVLTSCAED--GNTAALMLSAGF 639 Query: 477 TPKKEPHLKDLLTAIRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTS 298 P EPHLK +L AIR+ QL DLL K RIFVPKGRWL+GCLDE+G LE G+CFIRAS S Sbjct: 640 EPGSEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDELGVLEQGQCFIRASVPS 699 Query: 297 LKDCFVKHGCTFDEQSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFP 118 L F KHG F + ++ G V+IAKNPCLHPGD+RILEAVD+PEL+H+VDCLVFP Sbjct: 700 LNSYFKKHGSRFSSADRNTEIIVGTVVIAKNPCLHPGDVRILEAVDVPELHHLVDCLVFP 759 Query: 117 QKGSRPHPNEASGSDLDGDTYFVSWEPSLIPPRGESWDP 1 QKG RPH NEASGSDLDGD YFV+W+ LIPP +SW+P Sbjct: 760 QKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNP 798 >CAR47810.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 578 bits (1491), Expect = 0.0 Identities = 320/625 (51%), Positives = 407/625 (65%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKWIR 1597 + PR G + E+A YFS + VE LRV+ E V FF N+ I Sbjct: 273 IRPRNGPSFEKAMAYFSFRRV--PMVEMCNRKMLRVKDEPDFGVSMSDPFFCFQNEG-IS 329 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 F+ +L+N ++HKGI+N H + + F+ +L + + AL+HM SY + D +L Sbjct: 330 FKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSRQEEV--NLAALKHMFSYKWPVNDAIQKL 387 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 I L+ + L+ D +EVRRL+ITPTKAYC PP +ELSNRVLR Y+ V+DRF Sbjct: 388 VGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFN------D 1153 LRV F+DE M L L+ A + +E GF+ Sbjct: 448 LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507 Query: 1152 FSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 F A S NQLRD SAWFFA+ I I SWMG+F NVAK AARMGQCFSSTY+TV Sbjct: 508 FLA-FSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSN-RNVAKCAARMGQCFSSTYATV 565 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V + E+ DIERNGY FSDGIG IS DLA+EV +L LN+NPPSA+QIR+ GYKGV Sbjct: 566 EVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLNVNPPSAYQIRYAGYKGV 625 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP + L LRPSM KFD +H LEI SWTRF P +LNR+I+TLLS+L VKD + Sbjct: 626 VACWPTKND-GILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F ++Q M+S L +ML +VAFD++T+SC+ NTAA+M+ AGF P+ EPHL+ +L++ Sbjct: 685 FWEMQKEMISGLDKMLVDSDVAFDVITASCAEA-GNTAALMLSAGFKPQSEPHLRGMLSS 743 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 IRA QL DL K RIFVP GRWL+GCLDE+G+LE G+CFI+ S+ SL++CFVKHG F + Sbjct: 744 IRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPKFSD 803 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 + VV G V+IAKNPCLHPGD+RILEAVD+P L H+ DCLVFPQKG RPH NEASGS Sbjct: 804 IKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGS 863 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +LIPP +SW P Sbjct: 864 DLDGDLYFVTWDENLIPPSKKSWIP 888 >AAU21242.1 putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] Length = 1197 Score = 578 bits (1490), Expect = 0.0 Identities = 319/625 (51%), Positives = 408/625 (65%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKWIR 1597 + PR G + E+A YFS + + VE LRVR E V FF N+ I Sbjct: 273 IRPRNGPSFEKAMAYFSFHRV--PMVEMCNRKMLRVRDEPDFGVSMSDPFFCFQNEG-IS 329 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 F+ +L+N ++HKGI+N H + + F+ +L + + AL+HM SY + D +L Sbjct: 330 FKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSHQEEV--NLAALKHMFSYKWPVNDAIQKL 387 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 I L+ + L+ D +EVRRL+ITPTKAYC PP +ELSNRVLR Y+ V+DRF Sbjct: 388 VGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFN------D 1153 LRV F+DE M L L+ A + +E GF+ Sbjct: 448 LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507 Query: 1152 FSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 F A S NQLRD SAWFFA+ I I SWMG+F NVAK AARMGQCFSSTY+TV Sbjct: 508 FLA-FSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSN-RNVAKCAARMGQCFSSTYATV 565 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V + E+ DIERNGY FSDGIG IS DLALEV +L L++NPPSA+QIR+ G KGV Sbjct: 566 EVPSSEVNSELPDIERNGYVFSDGIGMISADLALEVAEKLHLSVNPPSAYQIRYAGCKGV 625 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP + L LRPSM KFD +H LEI SWTRF P +LNR+I+TLLS+L VKD + Sbjct: 626 VACWPTKND-GILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F ++Q M+S L +ML +VAFD++T+SC+ NTAA+M+ AGF P+ EPHL+ +L++ Sbjct: 685 FWEMQKEMISGLNKMLVDSDVAFDVITASCAEA-GNTAAIMLSAGFKPQSEPHLRGMLSS 743 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 IRA QL DL K RIFVP GRWL+GCLDE+G+LE G+CFI+ S+ SL++CF+KHG F + Sbjct: 744 IRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPKFSD 803 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 + VV G V+IAKNPCLHPGD+RILEAVD+P L+H+ DCLVFPQKG RPH NEASGS Sbjct: 804 IKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGS 863 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +LIPP +SW P Sbjct: 864 DLDGDLYFVTWDENLIPPSKKSWIP 888 >XP_019260524.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana attenuata] OIT39130.1 rna-dependent rna polymerase 6 [Nicotiana attenuata] Length = 1197 Score = 578 bits (1489), Expect = 0.0 Identities = 318/625 (50%), Positives = 409/625 (65%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKWIR 1597 + PR G + E+A YFS + + VE LRVR E V FF N+ I Sbjct: 273 IRPRNGPSFEKAMAYFSFHRV--PMVEMCNRKMLRVRDEPDFGVSMSDPFFCFQNEG-IS 329 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 F+ +L+N ++HKGI+N H + + F+ +L + + AL+HM SY + D +L Sbjct: 330 FKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSHQEEV--NLAALKHMFSYKWPVNDAIQKL 387 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 I L+ + L+ D +EVRRL+ITPTKAYC PP +ELSNRVLR Y+ V+DRF Sbjct: 388 VGIRKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFN------D 1153 LRV F+DE M L L+ A + +E GF+ Sbjct: 448 LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507 Query: 1152 FSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 F A S NQLRD SAWFFA+ I I SWMG+F NVAK AARMGQCFSSTY+TV Sbjct: 508 FLA-FSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSN-RNVAKCAARMGQCFSSTYATV 565 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V + E+ DIERNGY FSDGIG IS DLA+EV +L L++NPPSA+QIR+ G KGV Sbjct: 566 EVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSVNPPSAYQIRYAGCKGV 625 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP + +L LRPSM KFD +H LEI SWTRF P +LNR+I+TLLS+L VKD + Sbjct: 626 VACWPTKND-GIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F ++Q M+S L +ML +VAFD++T+SC+ NTAA+M+ AGF P+ EPHL+ +L++ Sbjct: 685 FWEMQKEMISGLDKMLVDSDVAFDVITASCAEA-GNTAAIMLSAGFKPQSEPHLRGMLSS 743 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 IRA QL DL K RIFVP GRWL+GCLDE+G+LE G+CFI+ S+ SL++CF+KHG F + Sbjct: 744 IRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPKFSD 803 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 + VV G V+IAKNPCLHPGD+RILEAVD+P L+H+ DCLVFPQKG RPH NEASGS Sbjct: 804 IKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGS 863 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +LIPP +SW P Sbjct: 864 DLDGDLYFVTWDENLIPPSKKSWIP 888 >XP_009758053.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris] Length = 1197 Score = 578 bits (1489), Expect = 0.0 Identities = 317/625 (50%), Positives = 409/625 (65%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKWIR 1597 + PR G + E+A YFS + + VE LRVR E V FF N+ I Sbjct: 273 IRPRNGPSFEKAMAYFSFHRV--PMVEMCNRKMLRVRDEPDFGVSMSDPFFCFQNEG-IS 329 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 F+ +L+N ++HKGI+N H + + F+ +L + + AL+HM SY + D +L Sbjct: 330 FKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSRQEEV--NLAALKHMFSYKWPVNDAIQKL 387 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 I ++ + L+ D +EVRRL+ITPTKAYC PP +ELSNRVLR Y+ V+DRF Sbjct: 388 VGIQKWLMKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFN------D 1153 LRV F+DE M L L+ A + +E GF+ Sbjct: 448 LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507 Query: 1152 FSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 F A S NQLRD SAWFFA+ I I SWMG+F NVAK AARMGQCFSSTY+TV Sbjct: 508 FLA-FSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSN-RNVAKCAARMGQCFSSTYATV 565 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V + E+ DIERNGY FSDGIG IS DLA+EV +L L++NPPSA+QIR+ G KGV Sbjct: 566 EVPSREVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKGV 625 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP + +L LRPSM KFD +H LEI SWTRF P +LNR+I+TLLS+L VKD + Sbjct: 626 VACWPTKND-GIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F ++Q M+S L +ML +VAFD++T+SC+ NTAA+M+ AGF P+ EPHL+ +L++ Sbjct: 685 FWEMQKEMISGLDKMLVDSDVAFDVITASCAEA-GNTAAIMLSAGFKPQSEPHLRGMLSS 743 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 IRA QL DL K RIFVP GRWL+GCLDE+G+LE G+CFI+ S+ SL++CF+KHG F + Sbjct: 744 IRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPKFSD 803 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 + VV G V+IAKNPCLHPGD+RILEAVD+P L+H+ DCLVFPQKG RPH NEASGS Sbjct: 804 IKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGS 863 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +LIPP +SW P Sbjct: 864 DLDGDLYFVTWDENLIPPSKKSWIP 888 >ACA13601.1 RNA-dependent RNA polymerase [Nicotiana attenuata] Length = 1197 Score = 578 bits (1489), Expect = 0.0 Identities = 318/625 (50%), Positives = 409/625 (65%), Gaps = 34/625 (5%) Frame = -2 Query: 1773 LSPRTGHTMEQAKRYFSRYHLLGETVERVFDSSLRVRPEGHV-VPRGLLFFTIPNQKWIR 1597 + PR G + E+A YFS + + VE LRVR E V FF N+ I Sbjct: 273 IRPRNGPSFEKAMAYFSFHRV--PMVEMCNRKMLRVRDEPDFGVSMSDPFFCFQNEG-IS 329 Query: 1596 FESQYLLNGLIHKGILNYHSLNDRFYRMLYPASTPLAQSTMALRHMHSYGNQIYDPCVEL 1417 F+ +L+N ++HKGI+N H + + F+ +L + + AL+HM SY + D +L Sbjct: 330 FKVMFLVNAVLHKGIVNQHQMTNEFFYLLRSHQEEV--NLAALKHMFSYKWPVNDAIQKL 387 Query: 1416 GRI----LQQYRHLKAPFIGPDTMEVRRLIITPTKAYCFPPEIELSNRVLRRYRSVSDRF 1249 I L+ + L+ D +EVRRL+ITPTKAYC PP +ELSNRVLR Y+ V+DRF Sbjct: 388 VGIRKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRF 447 Query: 1248 LRVCFLDESMDKLGSGALSVNVAPVAKE----------------------GFN------D 1153 LRV F+DE M L L+ A + +E GF+ Sbjct: 448 LRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYS 507 Query: 1152 FSANXSPNQLRDNSAWFFADGDSITANDIRSWMGKFHKITNVAKHAARMGQCFSSTYSTV 973 F A S NQLRD SAWFFA+ I I SWMG+F NVAK AARMGQCFSSTY+TV Sbjct: 508 FLA-FSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSN-RNVAKCAARMGQCFSSTYATV 565 Query: 972 DVGRMQFR-EIEDIERNGYTFSDGIGKISPDLALEVTRRLQLNINPPSAFQIRFGGYKGV 796 +V + E+ DIERNGY FSDGIG IS DLA+EV +L L++NPPSA+QIR+ G KGV Sbjct: 566 EVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSVNPPSAYQIRYAGCKGV 625 Query: 795 VSTWPIEPGMNYKLLLRPSMSKFDCDHRTLEIISWTRFLPAYLNREIITLLSALGVKDKV 616 V+ WP + +L LRPSM KFD +H LEI SWTRF P +LNR+I+TLLS+L VKD + Sbjct: 626 VACWPTKND-GIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGI 684 Query: 615 FRDLQNSMVSRLREMLEKDEVAFDILTSSCSGVLPNTAAVMIGAGFTPKKEPHLKDLLTA 436 F ++Q M+S L +ML +VAFD++T+SC+ NTAA+M+ AGF P+ EPHL+ +L++ Sbjct: 685 FWEMQKEMISGLDKMLVDSDVAFDVITASCAEA-GNTAAIMLSAGFKPQSEPHLRGMLSS 743 Query: 435 IRAVQLDDLLRKNRIFVPKGRWLIGCLDEVGKLEYGKCFIRASTTSLKDCFVKHGCTFDE 256 IRA QL DL K RIFVP GRWL+GCLDE+G+LE G+CFI+ S+ SL++CF+KHG F + Sbjct: 744 IRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPKFSD 803 Query: 255 QSNDPTVVTGKVIIAKNPCLHPGDIRILEAVDIPELYHMVDCLVFPQKGSRPHPNEASGS 76 + VV G V+IAKNPCLHPGD+RILEAVD+P L+H+ DCLVFPQKG RPH NEASGS Sbjct: 804 IKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGS 863 Query: 75 DLDGDTYFVSWEPSLIPPRGESWDP 1 DLDGD YFV+W+ +LIPP +SW P Sbjct: 864 DLDGDLYFVTWDENLIPPSKKSWIP 888