BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00007049
         (2067 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006829032.2 PREDICTED: RNA polymerase II-associated factor 1 ...   384   e-122
ERM96448.1 hypothetical protein AMTR_s00001p00252660 [Amborella ...   384   e-120
XP_008796955.1 PREDICTED: protein PAF1 homolog [Phoenix dactylif...   380   e-120
XP_009391055.1 PREDICTED: protein PAF1 homolog [Musa acuminata s...   383   e-119
XP_010941164.1 PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homo...   382   e-119
XP_010934933.2 PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homo...   378   e-117
ONK59004.1 uncharacterized protein A4U43_C08F1980 [Asparagus off...   369   e-117
EOY26930.1 Hydroxyproline-rich glycoprotein family protein isofo...   372   e-117
XP_017978851.1 PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homo...   372   e-116
EOY26929.1 Hydroxyproline-rich glycoprotein family protein isofo...   372   e-116
XP_020114495.1 protein PAF1 homolog [Ananas comosus]                  370   e-116
XP_010098144.1 hypothetical protein L484_026278 [Morus notabilis...   366   e-113
XP_010256861.1 PREDICTED: protein PAF1 homolog [Nelumbo nucifera...   364   e-112
CBI36059.3 unnamed protein product, partial [Vitis vinifera]          351   e-111
XP_008794837.1 PREDICTED: protein PAF1 homolog [Phoenix dactylif...   359   e-111
XP_012470138.1 PREDICTED: RNA polymerase II-associated factor 1 ...   359   e-111
XP_017611456.1 PREDICTED: protein PAF1 homolog [Gossypium arboreum]   358   e-111
XP_016743112.1 PREDICTED: protein PAF1 homolog, partial [Gossypi...   357   e-111
XP_017622922.1 PREDICTED: protein PAF1 homolog [Gossypium arbore...   358   e-110
XP_016672067.1 PREDICTED: protein PAF1 homolog [Gossypium hirsutum]   358   e-110

>XP_006829032.2 PREDICTED: RNA polymerase II-associated factor 1 homolog [Amborella
            trichopoda]
          Length = 543

 Score =  384 bits (986), Expect = e-122
 Identities = 204/418 (48%), Positives = 276/418 (66%), Gaps = 8/418 (1%)
 Frame = +1

Query: 565  AEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKLY 744
            AE+V+N+L+KPTTF+CKL FRNELPDPTAQPKLL+ NT+KD+Y+KY +TSLEK +KPKL+
Sbjct: 128  AERVENRLKKPTTFLCKLKFRNELPDPTAQPKLLALNTDKDQYSKYTITSLEKLHKPKLF 187

Query: 745  VEXXXXXXXXXXXXSVYKSPDVM-QXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGFS 921
            VE            SVY +P V  +               TP K +GIRRK+RPT+ G S
Sbjct: 188  VEPDLGIPLDLLDISVYNTPSVRPRLAPEDEELLRDGEVATPVKQDGIRRKDRPTEKGVS 247

Query: 922  WLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAAK 1101
            WLVKTQYIS +SL+  + + T+KQA+E RESRE  +  L++LNNREKQI +IEESF+A+K
Sbjct: 248  WLVKTQYISPLSLDQAKLSITEKQAKELRESREGRNHFLENLNNREKQIQAIEESFKASK 307

Query: 1102 SRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEATEE-EKYNKLDHTIRDELESR 1278
              P+HQT   L+PVEI+PLLPDF+R++D  V+  FDG+   + E YNKLD    DELESR
Sbjct: 308  LPPIHQTKPGLQPVEIMPLLPDFERYEDRYVMISFDGDPVADLEAYNKLDRATHDELESR 367

Query: 1279 AIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTKD 1452
            AIMKSFV  G D S  +KFL+Y+VPG EEL          I ++W+REY W +  +  +D
Sbjct: 368  AIMKSFV-SGTDSSKPEKFLAYLVPGPEELTKDMYDEHEDIDFSWIREYHWDVRGDDAED 426

Query: 1453 PSTYVITFGQDAARYLPLPAKLTLHRR---ARHNEDLDNQFPVPSKVVVRNRGLTHKEEE 1623
            P+TY++ F +  ARYLPLP KL L RR    R   D++  +PVPS+V VR R  T    E
Sbjct: 427  PTTYLVNFEEGGARYLPLPTKLVLRRRRIDGRSGHDIETHYPVPSRVTVRRRS-TVATNE 485

Query: 1624 VRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQN-LSAEEDMSE 1794
            ++++GRA  M  H+    +I   +  +  + +H   +K+ RL++ + +  S  EDMS+
Sbjct: 486  LKESGRAPSMHDHSISKVAIPSKRGRSPVEDVHDDRRKVSRLQDMDDDQFSGGEDMSD 543


>ERM96448.1 hypothetical protein AMTR_s00001p00252660 [Amborella trichopoda]
          Length = 689

 Score =  384 bits (986), Expect = e-120
 Identities = 204/418 (48%), Positives = 276/418 (66%), Gaps = 8/418 (1%)
 Frame = +1

Query: 565  AEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKLY 744
            AE+V+N+L+KPTTF+CKL FRNELPDPTAQPKLL+ NT+KD+Y+KY +TSLEK +KPKL+
Sbjct: 274  AERVENRLKKPTTFLCKLKFRNELPDPTAQPKLLALNTDKDQYSKYTITSLEKLHKPKLF 333

Query: 745  VEXXXXXXXXXXXXSVYKSPDVM-QXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGFS 921
            VE            SVY +P V  +               TP K +GIRRK+RPT+ G S
Sbjct: 334  VEPDLGIPLDLLDISVYNTPSVRPRLAPEDEELLRDGEVATPVKQDGIRRKDRPTEKGVS 393

Query: 922  WLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAAK 1101
            WLVKTQYIS +SL+  + + T+KQA+E RESRE  +  L++LNNREKQI +IEESF+A+K
Sbjct: 394  WLVKTQYISPLSLDQAKLSITEKQAKELRESREGRNHFLENLNNREKQIQAIEESFKASK 453

Query: 1102 SRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEATEE-EKYNKLDHTIRDELESR 1278
              P+HQT   L+PVEI+PLLPDF+R++D  V+  FDG+   + E YNKLD    DELESR
Sbjct: 454  LPPIHQTKPGLQPVEIMPLLPDFERYEDRYVMISFDGDPVADLEAYNKLDRATHDELESR 513

Query: 1279 AIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTKD 1452
            AIMKSFV  G D S  +KFL+Y+VPG EEL          I ++W+REY W +  +  +D
Sbjct: 514  AIMKSFV-SGTDSSKPEKFLAYLVPGPEELTKDMYDEHEDIDFSWIREYHWDVRGDDAED 572

Query: 1453 PSTYVITFGQDAARYLPLPAKLTLHRR---ARHNEDLDNQFPVPSKVVVRNRGLTHKEEE 1623
            P+TY++ F +  ARYLPLP KL L RR    R   D++  +PVPS+V VR R  T    E
Sbjct: 573  PTTYLVNFEEGGARYLPLPTKLVLRRRRIDGRSGHDIETHYPVPSRVTVRRRS-TVATNE 631

Query: 1624 VRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQN-LSAEEDMSE 1794
            ++++GRA  M  H+    +I   +  +  + +H   +K+ RL++ + +  S  EDMS+
Sbjct: 632  LKESGRAPSMHDHSISKVAIPSKRGRSPVEDVHDDRRKVSRLQDMDDDQFSGGEDMSD 689


>XP_008796955.1 PREDICTED: protein PAF1 homolog [Phoenix dactylifera]
          Length = 583

 Score =  380 bits (977), Expect = e-120
 Identities = 205/415 (49%), Positives = 276/415 (66%), Gaps = 8/415 (1%)
 Frame = +1

Query: 568  EKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKLYV 747
            E+++N+L+KPTTF+CK+ FRNELPDPTAQPKLL+ NT+KDRYT+Y +TSLEK YKPKLYV
Sbjct: 173  ERIENRLKKPTTFLCKMKFRNELPDPTAQPKLLAMNTDKDRYTRYTITSLEKMYKPKLYV 232

Query: 748  EXXXXXXXXXXXXSVYKSPDVMQXXXXXXXXXXXXX-AGTPNKLEGIRRKERPTDTGFSW 924
            E            SVY  P V                  TP K EGIR+K+RPTD G SW
Sbjct: 233  EQDLGIPLDLLDMSVYNPPKVRPPLAPEDQELLRDDDVATPIKQEGIRKKDRPTDKGVSW 292

Query: 925  LVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAAKS 1104
            LVKTQYIS +S +  + + T+KQA+E RE+RE  +  L++LNNREKQI +IEESFRAA+ 
Sbjct: 293  LVKTQYISPLSTDAAKLSLTEKQAKEMRENREGRNAFLENLNNREKQIQAIEESFRAAQL 352

Query: 1105 RPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELESRA 1281
             PV+QTN  L  VEI+PLLPDFDR+DD+ V+  FDG+ T + E+YNKLD +IRDE ES+A
Sbjct: 353  PPVNQTNPKLRAVEILPLLPDFDRYDDQFVMVSFDGDPTADAEQYNKLDRSIRDEYESQA 412

Query: 1282 IMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTKDP 1455
            IMKSFV+ G DP+  +KFL+YMVP  EEL          ISY+W+REY W +  +   DP
Sbjct: 413  IMKSFVVNGSDPAKPEKFLAYMVPAPEELSKDMYDENEDISYSWVREYHWDVRGDDADDP 472

Query: 1456 STYVITFGQDAARYLPLPAKLTLHRR----ARHNEDLDNQFPVPSKVVVRNRGLTHKEEE 1623
            +TY++ F   +ARYLPLP KL L ++     R  +++++ FPVP++V VR R       E
Sbjct: 473  TTYLVNFDDKSARYLPLPTKLVLQKKRAKEGRFGDEIEH-FPVPARVTVRGRSAV-AVGE 530

Query: 1624 VRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDM 1788
            ++++G   + +   +++    G  R + DD   R + KL R+++ +Q  S EEDM
Sbjct: 531  LKESGETSVKKDQVDIMSLKRG--RFSRDDDFERQN-KLARVDDMDQ-FSGEEDM 581


>XP_009391055.1 PREDICTED: protein PAF1 homolog [Musa acuminata subsp. malaccensis]
          Length = 730

 Score =  383 bits (984), Expect = e-119
 Identities = 235/560 (41%), Positives = 315/560 (56%), Gaps = 23/560 (4%)
 Frame = +1

Query: 184  SVPNSHWGSSSATPSKAQNAPHGSNHRGHSSSVP---QPKLPMTPAKLKVPSPMPARPTP 354
            SVP     SS+ +P    +   G  H+G   ++P   QPKL + P + K PS  PA    
Sbjct: 181  SVPPPPPPSSNQSPLVPPDV--GQRHQGAREALPPGRQPKLSLPPKQQKPPSAPPAGRAS 238

Query: 355  HRGSGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVSSATKALLDKRSLETPA--- 525
             +  GP+                                +  +   +L K  +       
Sbjct: 239  AQPGGPNGTSMRVETEEERRLRKRREYEKQKQEEKRQLLLKQSQATVLQKTQMMVSGSAR 298

Query: 526  -HGDGKVDKNSQN------AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNK 684
             HG     + ++       + E+++N+L+KPTTF+CK+ FRN+LPDPTAQPKLL+ + +K
Sbjct: 299  PHGSITGSRIAERRTTPFLSGERIENRLKKPTTFICKMKFRNDLPDPTAQPKLLAMHKDK 358

Query: 685  DRYTKYAVTSLEKSYKPKLYVEXXXXXXXXXXXXSVYKSPDVMQXXXXXXXXXXXXX-AG 861
            DRYTKY +TSLEK +KPKLYVE            SVY    V                  
Sbjct: 359  DRYTKYTITSLEKMHKPKLYVEQDLGVPLDLLDMSVYNPSAVRTALSPEDEELLLDDEVV 418

Query: 862  TPNKLEGIRRKERPTDTGFSWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLD 1041
            TP K  GIRRKERPTD G SWLVKTQYIS +S+E  + + T+KQA+E RES+E  +  L+
Sbjct: 419  TPIKQGGIRRKERPTDKGVSWLVKTQYISPISMEAAKMSLTEKQAKEIRESKEGRNLFLE 478

Query: 1042 SLNNREKQIMSIEESFRAAKSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT 1221
            +LNNR++QI +IEESFRAAK  PVHQT   LE V+I+PLLPDFDR +D+ V+  FDG+ T
Sbjct: 479  NLNNRDRQIQTIEESFRAAKLPPVHQTKPELEAVDILPLLPDFDRCEDQFVMVNFDGDPT 538

Query: 1222 -EEEKYNKLDHTIRDELESRAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXX 1392
             + E+YNKLD +IRDELES+AIMKSF+  G DP   +KFL+YMVP  +EL          
Sbjct: 539  ADSEQYNKLDRSIRDELESQAIMKSFIANGSDPMNPEKFLAYMVPQPDELYKDLKSENED 598

Query: 1393 ISYTWLREYRWKLLPEKTKDPSTYVITFGQDAARYLPLPAKLTLHRR----ARHNEDLDN 1560
             SY+W+REY W +  +   DP+TY +TFG+  ARYLPLP KL L ++     R  ++++ 
Sbjct: 599  TSYSWVREYHWDVRGDDADDPTTYFVTFGEKDARYLPLPTKLVLQKKKAKEGRSGDEIE- 657

Query: 1561 QFPVPSKVVVRNRGLTHKEE--EVRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQ 1734
            QFPVPS+V VR +  T   E  E  +A R        N+ R      R + DD + R H 
Sbjct: 658  QFPVPSRVTVRKKSTTTYGEPNEYGEASRNNEKLDVRNIKRG-----RSSMDDDLERQH- 711

Query: 1735 KLQRLEETEQNLSAEEDMSE 1794
            K QR E+ +Q  S EEDMS+
Sbjct: 712  KFQRTEDIDQ-FSGEEDMSD 730


>XP_010941164.1 PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homolog [Elaeis
            guineensis]
          Length = 732

 Score =  382 bits (982), Expect = e-119
 Identities = 203/417 (48%), Positives = 279/417 (66%), Gaps = 8/417 (1%)
 Frame = +1

Query: 568  EKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKLYV 747
            E+++N+L+KPTTF+CK+ FRNELPDPT QPKLL+ NT+KDRYTKY +TSLEK +KP+LYV
Sbjct: 322  ERIENRLKKPTTFLCKMKFRNELPDPTGQPKLLAVNTDKDRYTKYTITSLEKMHKPRLYV 381

Query: 748  EXXXXXXXXXXXXSVYKSPDVMQXXXXXXXXXXXXXA-GTPNKLEGIRRKERPTDTGFSW 924
            E            SVY  P V                  TP K EGI++K+RPTD G SW
Sbjct: 382  EQDLGIPLDLLDISVYNPPGVRPPLASEDQELLRDDGVATPIKQEGIKKKDRPTDKGVSW 441

Query: 925  LVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAAKS 1104
            LVKTQYIS +S ++T+ + T+KQA+E RE+RE  +  L++LNNREKQI +IEESF+AA+ 
Sbjct: 442  LVKTQYISPLSTDSTKLSLTEKQAKEMRENREGRNAFLENLNNREKQIQAIEESFKAAQL 501

Query: 1105 RPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELESRA 1281
             P+HQTN  L+ VEI+PLLPDFDR+DD  V+  FDG+ T + E+YNKLD +I DE ES+A
Sbjct: 502  SPIHQTNPKLQAVEILPLLPDFDRYDDRFVMLTFDGDPTADAEQYNKLDRSICDEHESQA 561

Query: 1282 IMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTKDP 1455
            I+KSFV+ G DP+  +KFL+YMVP  +EL          ISY+W+REY W +  +   DP
Sbjct: 562  IVKSFVVNGSDPTRPEKFLAYMVPAPDELSKDMYDENEEISYSWVREYHWDVRGDDAHDP 621

Query: 1456 STYVITFGQDAARYLPLPAKLTLHRR----ARHNEDLDNQFPVPSKVVVRNRGLTHKEEE 1623
            +TYV+TF    ARYLPLP +L L ++     R  +++++ FPVPS+V VR R       E
Sbjct: 622  ATYVVTFDNKTARYLPLPTRLVLQKKRAKEGRFGDEIEH-FPVPSRVTVRRRSAV-AIGE 679

Query: 1624 VRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDMSE 1794
            ++++G   + +   +++ S  G  R + DD   R HQ L ++++ +Q  S EEDMS+
Sbjct: 680  LKESGEISVKKDQIDIMSSKRG--RFSRDDDFERQHQ-LAQMDDVDQ-FSGEEDMSD 732


>XP_010934933.2 PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homolog [Elaeis
            guineensis]
          Length = 734

 Score =  378 bits (970), Expect = e-117
 Identities = 205/415 (49%), Positives = 276/415 (66%), Gaps = 8/415 (1%)
 Frame = +1

Query: 568  EKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKLYV 747
            E+++N+L+KPTTF+CK+ FRNELPDPTAQPKLL+ NT+KDRYT+Y +TSLEK YKPKLYV
Sbjct: 324  ERIENRLKKPTTFLCKMKFRNELPDPTAQPKLLAINTDKDRYTRYTITSLEKMYKPKLYV 383

Query: 748  EXXXXXXXXXXXXSVYKSPDV-MQXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGFSW 924
            E            SVY  P V                  TP K EGIR+K+RPTD G SW
Sbjct: 384  EQDLGIPLDLLDISVYNPPKVRFPLAPEDQELLRDDEVATPIKQEGIRKKDRPTDKGVSW 443

Query: 925  LVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAAKS 1104
            LVKTQYIS +S +  + + T+KQA+E RE+RE  +  L++LNNREKQI +IEESFRAA+ 
Sbjct: 444  LVKTQYISPLSTDAAKLSLTEKQAKEMRENREGRNVFLENLNNREKQIQAIEESFRAAQL 503

Query: 1105 RPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELESRA 1281
             PV+QTN  L  VEI+PLLP+FDR DD+ V+  FDG+ T + E+YNKLD +IRDE ES+A
Sbjct: 504  PPVNQTNPKLRAVEILPLLPNFDRDDDQFVMVSFDGDPTADAEQYNKLDRSIRDEYESQA 563

Query: 1282 IMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTKDP 1455
            IMKSFV+ G DP+  +KFL+YMVP  +EL          ISY+W+REY W +  +   DP
Sbjct: 564  IMKSFVVNGSDPAKPEKFLAYMVPAPDELSKNMYDENEDISYSWVREYHWDVRGDVADDP 623

Query: 1456 STYVITFGQDAARYLPLPAKLTLHRR----ARHNEDLDNQFPVPSKVVVRNRGLTHKEEE 1623
            +TY++TF   AARYLPLP KL L ++     R  +++++ FPVP++V VR R       E
Sbjct: 624  TTYLVTFDDKAARYLPLPTKLVLQKKRAKEGRFGDEIEH-FPVPARVTVRRRSAV-AVGE 681

Query: 1624 VRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDM 1788
            ++++G   + +   +++    G  R + DD   R + KL R+++ +Q  S EEDM
Sbjct: 682  LKESGETSVKKDQVDILSLKRG--RFSRDDDFEREN-KLARVDDMDQ-FSGEEDM 732


>ONK59004.1 uncharacterized protein A4U43_C08F1980 [Asparagus officinalis]
          Length = 459

 Score =  369 bits (946), Expect = e-117
 Identities = 204/435 (46%), Positives = 280/435 (64%), Gaps = 11/435 (2%)
 Frame = +1

Query: 523  AHGDGKVDKNSQN--AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYT 696
            A G   +D+ S    + ++++N+L+KPTTF+C++ FRNELPDPTAQPKLL   T+KDRYT
Sbjct: 32   ASGSKMMDRRSTPLLSGDRIENRLKKPTTFLCRMKFRNELPDPTAQPKLLPVLTDKDRYT 91

Query: 697  KYAVTSLEKSYKPKLYVEXXXXXXXXXXXXSVYKSPDVMQXXXXXXXXXXXXX-AGTPNK 873
            +Y +TSLEK+YKPKL+VE            SVYK+P+V                  TP K
Sbjct: 92   RYTITSLEKNYKPKLFVEPDMGIPLDLLDLSVYKAPEVPPPLDPEDEALLHDSEVATPIK 151

Query: 874  LEGIRRKERPTDTGFSWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNN 1053
             EGIR KERPTD G SWLVKTQYIS +S ++ + + T+KQA+E RE+RE  +  L++LN+
Sbjct: 152  HEGIRIKERPTDKGVSWLVKTQYISPLSTDSAKLSLTEKQAKEMREAREGRNFSLENLNS 211

Query: 1054 REKQIMSIEESFRAAKSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEE 1230
            REKQI +IEESF+AAK  PVHQTN +L+PVE++PLLPD DR+DD  V+  FD + T + E
Sbjct: 212  REKQIQAIEESFKAAKLPPVHQTNPSLKPVEVLPLLPDLDRYDDRFVMVGFDSDPTADSE 271

Query: 1231 KYNKLDHTIRDELESRAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYT 1404
             Y+KLD + RDE+ES AIMKSFV+ G DP+  +KFLSYMVP  +EL          +SY+
Sbjct: 272  AYSKLDRSTRDEVESLAIMKSFVVNGSDPTKPEKFLSYMVPAPDELNKDMYDESEDMSYS 331

Query: 1405 WLREYRWKLLPEKTKDPSTYVITFGQDAARYLPLPAKLTLHRR----ARHNEDLDNQFPV 1572
            W+REY W +  +   DP+TY++ FG++ ARYLPLP KL L ++     R  +++++ +PV
Sbjct: 332  WVREYHWDVRGDDADDPTTYLVNFGEEDARYLPLPTKLVLQKKKAKEGRSGDEVEH-YPV 390

Query: 1573 PSKVVVRNRGLTHKEEEVRDAGRARLMEGHANVVRSISGAKRMAS-DDSIHRSHQKLQRL 1749
            PS V VR R      E+   AG +       N    ++G K   S  D    +  K+ R+
Sbjct: 391  PSSVTVRKRPTVAVVEQKESAGTS-----SNNGTGDVTGLKHDRSFRDYESGTRHKIPRM 445

Query: 1750 EETEQNLSAEEDMSE 1794
            +  +Q  S EEDMS+
Sbjct: 446  DSMDQ-FSGEEDMSD 459


>EOY26930.1 Hydroxyproline-rich glycoprotein family protein isoform 2 [Theobroma
            cacao]
          Length = 562

 Score =  372 bits (955), Expect = e-117
 Identities = 202/422 (47%), Positives = 275/422 (65%), Gaps = 11/422 (2%)
 Frame = +1

Query: 562  AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKL 741
            + E+++N+L+KPTTF+CKL FRNELPDP+AQPKL++   +KDR+TKY +TSLEK YKPKL
Sbjct: 152  SGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLMALKKDKDRFTKYTITSLEKMYKPKL 211

Query: 742  YVEXXXXXXXXXXXXSVYKSPDVM-QXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGF 918
            +VE            SVY  P V                A TP K +GIRRKERPTD G 
Sbjct: 212  FVEPDLGIPLDLLDLSVYNPPSVRPSLAPEDAELLHDDEAVTPIKKDGIRRKERPTDKGV 271

Query: 919  SWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAA 1098
            SWLVKTQYIS +S+E+T+Q+ T+KQA+E RE +    ++L++LNNRE+QI  IE SF A+
Sbjct: 272  SWLVKTQYISPLSMESTKQSLTEKQAKELRELKG-GRNILENLNNRERQIKEIEASFEAS 330

Query: 1099 KSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELES 1275
            K RPVH TN NLEPVE++PLLPDFDR++D+ V+  FDG  T + E ++KLD ++RDE ES
Sbjct: 331  KLRPVHATNKNLEPVEVMPLLPDFDRYNDQFVMVAFDGAPTADSEIFSKLDDSVRDEHES 390

Query: 1276 RAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTK 1449
            RAIMKS++    DP+  +KFL+YMVP L+EL          +SY+W+REY W +  +   
Sbjct: 391  RAIMKSYLAASSDPANPEKFLAYMVPSLDELSKGMYDEHEDVSYSWVREYNWDVRGDDAN 450

Query: 1450 DPSTYVITFGQDAARYLPLPAKLTLH-RRARHNEDLD--NQFPVPSKVVVRNR----GLT 1608
            DP+TY+++F +  ARY+PLP KL L  +RAR     D    FP+P+++ VR R     + 
Sbjct: 451  DPTTYLVSFDEGEARYVPLPTKLNLRKKRAREGRTGDEIEHFPIPARITVRRRSTVAAIE 510

Query: 1609 HKEEEVRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDM 1788
             KE EV  + R  +         S S   R+ ++D + RSH KL R  + +Q   AE+D+
Sbjct: 511  LKEPEVYTSSRGGM---------SSSKIGRLDAEDGLGRSH-KLARHHDVDQYSGAEDDL 560

Query: 1789 SE 1794
            SE
Sbjct: 561  SE 562


>XP_017978851.1 PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homolog [Theobroma
            cacao]
          Length = 688

 Score =  372 bits (956), Expect = e-116
 Identities = 202/422 (47%), Positives = 275/422 (65%), Gaps = 11/422 (2%)
 Frame = +1

Query: 562  AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKL 741
            + E+++N+L+KPTTF+CKL FRNELPDP+AQPKL++   +KDR+TKY +TSLEK YKPKL
Sbjct: 278  SGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLMALKKDKDRFTKYTITSLEKMYKPKL 337

Query: 742  YVEXXXXXXXXXXXXSVYKSPDVM-QXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGF 918
            +VE            SVY  P V                A TP K +GIRRKERPTD G 
Sbjct: 338  FVEPDLGIPLDLLDLSVYNPPSVRPSLAPEDAELLHDDEAVTPIKKDGIRRKERPTDKGV 397

Query: 919  SWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAA 1098
            SWLVKTQYIS +S+E+T+Q+ T+KQA+E RE +    ++L++LNNRE+QI  IE SF A+
Sbjct: 398  SWLVKTQYISPLSMESTKQSLTEKQAKELRELKG-GRNILENLNNRERQIKEIEASFEAS 456

Query: 1099 KSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELES 1275
            K RPVH TN NLEPVE++PLLPDFDR++D+ V+  FDG  T + E ++KLD ++RDE ES
Sbjct: 457  KLRPVHATNKNLEPVEVMPLLPDFDRYNDQFVMVAFDGAPTADSEIFSKLDDSVRDEHES 516

Query: 1276 RAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTK 1449
            RAIMKS++    DP+  +KFL+YMVP L+EL          +SY+W+REY W +  +   
Sbjct: 517  RAIMKSYLAASSDPANPEKFLAYMVPSLDELSKGMYDEHEDVSYSWVREYNWDVRGDDAN 576

Query: 1450 DPSTYVITFGQDAARYLPLPAKLTLH-RRARHNEDLD--NQFPVPSKVVVRNR----GLT 1608
            DP+TY+++F +  ARY+PLP KL L  +RAR     D    FP+P+++ VR R     + 
Sbjct: 577  DPTTYLVSFDEGEARYVPLPTKLNLRKKRAREGRTGDEIEHFPIPARITVRRRSTVAAIE 636

Query: 1609 HKEEEVRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDM 1788
             KE EV  + R  +         S S   R+ ++D + RSH KL R  + +Q   AE+D+
Sbjct: 637  LKEPEVYSSSRGGM---------SSSKIGRLDAEDGLGRSH-KLARHHDVDQYSGAEDDL 686

Query: 1789 SE 1794
            SE
Sbjct: 687  SE 688


>EOY26929.1 Hydroxyproline-rich glycoprotein family protein isoform 1 [Theobroma
            cacao]
          Length = 685

 Score =  372 bits (955), Expect = e-116
 Identities = 202/422 (47%), Positives = 275/422 (65%), Gaps = 11/422 (2%)
 Frame = +1

Query: 562  AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKL 741
            + E+++N+L+KPTTF+CKL FRNELPDP+AQPKL++   +KDR+TKY +TSLEK YKPKL
Sbjct: 275  SGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLMALKKDKDRFTKYTITSLEKMYKPKL 334

Query: 742  YVEXXXXXXXXXXXXSVYKSPDVM-QXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGF 918
            +VE            SVY  P V                A TP K +GIRRKERPTD G 
Sbjct: 335  FVEPDLGIPLDLLDLSVYNPPSVRPSLAPEDAELLHDDEAVTPIKKDGIRRKERPTDKGV 394

Query: 919  SWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAA 1098
            SWLVKTQYIS +S+E+T+Q+ T+KQA+E RE +    ++L++LNNRE+QI  IE SF A+
Sbjct: 395  SWLVKTQYISPLSMESTKQSLTEKQAKELRELKG-GRNILENLNNRERQIKEIEASFEAS 453

Query: 1099 KSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELES 1275
            K RPVH TN NLEPVE++PLLPDFDR++D+ V+  FDG  T + E ++KLD ++RDE ES
Sbjct: 454  KLRPVHATNKNLEPVEVMPLLPDFDRYNDQFVMVAFDGAPTADSEIFSKLDDSVRDEHES 513

Query: 1276 RAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTK 1449
            RAIMKS++    DP+  +KFL+YMVP L+EL          +SY+W+REY W +  +   
Sbjct: 514  RAIMKSYLAASSDPANPEKFLAYMVPSLDELSKGMYDEHEDVSYSWVREYNWDVRGDDAN 573

Query: 1450 DPSTYVITFGQDAARYLPLPAKLTLH-RRARHNEDLD--NQFPVPSKVVVRNR----GLT 1608
            DP+TY+++F +  ARY+PLP KL L  +RAR     D    FP+P+++ VR R     + 
Sbjct: 574  DPTTYLVSFDEGEARYVPLPTKLNLRKKRAREGRTGDEIEHFPIPARITVRRRSTVAAIE 633

Query: 1609 HKEEEVRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDM 1788
             KE EV  + R  +         S S   R+ ++D + RSH KL R  + +Q   AE+D+
Sbjct: 634  LKEPEVYTSSRGGM---------SSSKIGRLDAEDGLGRSH-KLARHHDVDQYSGAEDDL 683

Query: 1789 SE 1794
            SE
Sbjct: 684  SE 685


>XP_020114495.1 protein PAF1 homolog [Ananas comosus]
          Length = 631

 Score =  370 bits (950), Expect = e-116
 Identities = 214/544 (39%), Positives = 299/544 (54%), Gaps = 15/544 (2%)
 Frame = +1

Query: 208  SSSATPSKAQNAPHGSNHRGHSSSVPQPKLPMTPAKLKVPSPMPARPT--PHRGSGPSXX 381
            S+   P  A +     +H  H+ +  +P     P + K  +P   +P+  PH  SGP   
Sbjct: 102  SAPPPPPPALSTQRTHHHHHHNPNSKEPSAAAAPRQQKPVAPASGKPSAYPHGQSGPVET 161

Query: 382  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVSSATKALLDKRSLETPAHGDGKVDKNSQN 561
                                           + A K  +       P HG     + +  
Sbjct: 162  EEERRMRKKREYEKQKQEERRQQLMLKQSQATVAHKTQM------RPQHGSMAGSRMATA 215

Query: 562  ---AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYK 732
                 ++V N+L+KPTTF+CK+ FRNELPDPTAQPKLL+ NT+KDRYTKY +TSLEK YK
Sbjct: 216  PFLGGDRVMNRLKKPTTFICKMKFRNELPDPTAQPKLLALNTDKDRYTKYTITSLEKLYK 275

Query: 733  PKLYVEXXXXXXXXXXXXSVYKSPDVMQXXXXXXXXXXXXX-AGTPNKLEGIRRKERPTD 909
            PKLY E            S+Y  P +                  TP K +GIRRKERP+D
Sbjct: 276  PKLYPEQDLGIPLDLLDISIYNPPPIYSPITPEDEELLRDDEVVTPIKQDGIRRKERPSD 335

Query: 910  TGFSWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESF 1089
             G SWLVKTQYIS +S++  + + T+KQA+E RE++E  +  L++LN+REKQI +IEESF
Sbjct: 336  IGVSWLVKTQYISPISMDEAKMSITEKQAKEMRETKEGRNSFLENLNSREKQIQAIEESF 395

Query: 1090 RAAKSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDE 1266
            +AAK  PVHQT   +E   + PLLPDFDR+DD  V+  FDGE T + E+YNKL+ ++RDE
Sbjct: 396  KAAKLPPVHQTKPAMEAEWVQPLLPDFDRYDDRFVMVTFDGEPTVDSEQYNKLESSVRDE 455

Query: 1267 LESRAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPE 1440
             ES+A+MKSFV+ G DP+  +KFL+YMVP  EE+          +SY+W+REY W +  +
Sbjct: 456  YESQALMKSFVVNGSDPAKPEKFLAYMVPAPEEITKDVYDENEELSYSWIREYHWDVRGD 515

Query: 1441 KTKDPSTYVITFGQDAARYLPLPAKLTLHRR----ARHNEDLDNQFPVPSKVVVRNRGLT 1608
               DP+TY++TFG  AARYLPLP KL L ++     R  +D+++ FPVPS++ VR +   
Sbjct: 516  DADDPTTYLMTFGDGAARYLPLPTKLVLQKKKAKEGRSGDDVEH-FPVPSRITVRRKSAV 574

Query: 1609 H--KEEEVRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEE 1782
               + +E+ +  R        N  R     +    DD + R H   + +       S E+
Sbjct: 575  AVIENKELEEISRKHEKADDRNSKRQ----RSFDDDDDMERQH---KYMHTDGDQFSGED 627

Query: 1783 DMSE 1794
            DMS+
Sbjct: 628  DMSD 631


>XP_010098144.1 hypothetical protein L484_026278 [Morus notabilis] EXB74581.1
            hypothetical protein L484_026278 [Morus notabilis]
          Length = 697

 Score =  366 bits (940), Expect = e-113
 Identities = 205/458 (44%), Positives = 288/458 (62%), Gaps = 17/458 (3%)
 Frame = +1

Query: 469  HVSSATKALLDKRSLETPAHGDGKVDKNSQN--------AAEKVDNKLRKPTTFVCKLVF 624
            H+  +  + L K  + + A G G +  +           + E+++N+L+KPTTF+CKL F
Sbjct: 248  HLKESQHSALQKTQILSAAKGHGSIAGSRMGERRATSFLSGERIENRLKKPTTFLCKLKF 307

Query: 625  RNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKLYVEXXXXXXXXXXXXSVYKSP 804
            RNELPDP+AQPKL+S    KD+Y+KY +TSLEK+YKPKL+VE            SVY  P
Sbjct: 308  RNELPDPSAQPKLMSMKREKDQYSKYTITSLEKTYKPKLFVEPDLGIPLNLLDLSVYNPP 367

Query: 805  DVM-QXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGFSWLVKTQYISSVSLENTRQAH 981
             V                A TP K +GI+RKERPTD G +WLVKTQYIS +S+E+T+Q+ 
Sbjct: 368  SVRPPLDPEDEELLRDDEAVTPVKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSL 427

Query: 982  TDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAAKSRPVHQTNSNLEPVEIIPLL 1161
            T+KQA+E RE +    ++L++LN+R++QI  I+ SF A KSRPVH TN +L PVE++PLL
Sbjct: 428  TEKQAKELRELKG-GRNILENLNDRDRQIKEIQASFEACKSRPVHATNKSLYPVEVLPLL 486

Query: 1162 PDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELESRAIMKSFVLPGEDPSASDKFL 1338
            PDFDR+DD+ VLA FD   T + E Y+K+D +IRD  ES+A++KS+ + G DP   +KFL
Sbjct: 487  PDFDRYDDQFVLAAFDSAPTADSEVYSKMDQSIRDAHESQAVLKSYKVTGSDPGNPEKFL 546

Query: 1339 SYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTKDPSTYVITFGQDAARYLPLPA 1512
            +YMVP  +EL          +SY+W+REY W +  +   DP+TY+++F +  ARYLPLP 
Sbjct: 547  AYMVPSPDELSKDIYDEHEDVSYSWVREYHWDVRGDDADDPTTYLVSFDETEARYLPLPT 606

Query: 1513 KLTLH-RRARHNEDLD--NQFPVPSKVVVRNRGLTHKEEEVRDAGRARLMEGHANVVRSI 1683
            KL L  +RA+     D    FPVP++V VR R  T    E++DA      E ++N   S+
Sbjct: 607  KLVLRKKRAKEGRSGDEVEHFPVPARVTVRRRP-TVSVVELKDA------EVYSNPRGSL 659

Query: 1684 SGAKRMASD--DSIHRSHQKLQRLEETEQNLSAEEDMS 1791
            S  KR  SD  D + RSH K+ R E+ ++   AE+D+S
Sbjct: 660  SNFKRGGSDVEDGLERSH-KVARQEDVDEYSGAEDDLS 696


>XP_010256861.1 PREDICTED: protein PAF1 homolog [Nelumbo nucifera] XP_010256862.1
            PREDICTED: protein PAF1 homolog [Nelumbo nucifera]
            XP_010256863.1 PREDICTED: protein PAF1 homolog [Nelumbo
            nucifera]
          Length = 734

 Score =  364 bits (935), Expect = e-112
 Identities = 202/420 (48%), Positives = 273/420 (65%), Gaps = 9/420 (2%)
 Frame = +1

Query: 562  AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKL 741
            + ++++N+L+KPTTF+CKL FRNELPDPTAQPKLL+ NT+KDRYTKYA+TSLEK +KPKL
Sbjct: 323  SGDRIENRLKKPTTFLCKLKFRNELPDPTAQPKLLALNTDKDRYTKYAITSLEKMHKPKL 382

Query: 742  YVEXXXXXXXXXXXXSVYKSPDVMQXXXXXXXXXXXXXAG-TPNKLEGIRRKERPTDTGF 918
            +VE            +VY  P V                  TP K EGIRRKERPTD G 
Sbjct: 383  FVEPDLGIPLDLLDLNVYNPPSVRPPLAPEDEELLRDSESITPVKQEGIRRKERPTDKGV 442

Query: 919  SWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAA 1098
            +WLVKTQYIS +S++  +Q+ T+KQA+E RE+R    ++L +LNNREKQI +IE SF A 
Sbjct: 443  AWLVKTQYISPLSMDAAKQSLTEKQAKELRETRG-GINLLANLNNREKQIQAIETSFEAC 501

Query: 1099 KSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELES 1275
            K  PVH TN NL+PVEI+PLLPDF+R DD  V A FD + T + E Y+KLD +IRD  ES
Sbjct: 502  KLPPVHATNPNLQPVEILPLLPDFERLDDRFVTAAFDSDPTADSEIYSKLDRSIRDAYES 561

Query: 1276 RAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTK 1449
            +AIMKSF+  G D +  +KFL+YMVP  +EL          +SY+W+REY W +  +   
Sbjct: 562  QAIMKSFIAGGSDSTKPEKFLAYMVPSPDELGKDVYDENEDVSYSWVREYHWDVRGDDAD 621

Query: 1450 DPSTYVITFGQDAARYLPLPAKLTLH-RRARHNEDLD--NQFPVPSKVVVRNRGLTHKEE 1620
            DP+TY++TF  +AARYLPLP KL L  +RA+     D    +P+PS+V VR R       
Sbjct: 622  DPTTYLVTFDDEAARYLPLPTKLVLRKKRAKEGRSSDEIEHYPIPSRVTVRCRPEV-AVI 680

Query: 1621 EVRDAGRARLMEGHANVVRSISGAK--RMASDDSIHRSHQKLQRLEETEQNLSAEEDMSE 1794
            EV+++G      G+ N    IS +K  R+ +DD + R ++  +  ++ + +  AE+DMS+
Sbjct: 681  EVQESG------GYENFKAGISSSKRGRLTTDDGLVRHNKGARVQDDMDHSSGAEDDMSD 734


>CBI36059.3 unnamed protein product, partial [Vitis vinifera]
          Length = 420

 Score =  351 bits (901), Expect = e-111
 Identities = 193/423 (45%), Positives = 273/423 (64%), Gaps = 12/423 (2%)
 Frame = +1

Query: 562  AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKL 741
            + ++++N+LRKPTTF+CKL FRNELPDPTAQPKL++  T+KDR+TKY +TSLEK +KP+L
Sbjct: 11   SGDRIENRLRKPTTFLCKLKFRNELPDPTAQPKLMALKTDKDRFTKYTITSLEKMHKPQL 70

Query: 742  YVEXXXXXXXXXXXXSVYKSPDVMQXXXXXXXXXXXXXAG-TPNKLEGIRRKERPTDTGF 918
            +VE            SVY  P V +                TP K EGI++KERPTD G 
Sbjct: 71   FVEPDLGIPLDLLDLSVYNPPSVRRPLDPEDEELLRDDESVTPVKKEGIKKKERPTDKGV 130

Query: 919  SWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAA 1098
            SWLVKTQYIS +S E+T+Q+ T+KQA+E RE++    ++L++ N+RE++I +IE +F A+
Sbjct: 131  SWLVKTQYISPLSTESTKQSLTEKQAKELRETKG-GRNILENFNSRERKIQNIEAAFAAS 189

Query: 1099 KSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELES 1275
            K  PVH TN +L+PVEI+PLLPDF R+DD  V+A FD   T + E Y+KLD T+RD  ES
Sbjct: 190  KITPVHSTNKSLKPVEILPLLPDFARYDDSFVVASFDSAPTADSEIYSKLDKTVRDSHES 249

Query: 1276 RAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTK 1449
            +AI+KS++  G DPS  +KFL+YM P  +EL           SY+W+REY W +  +   
Sbjct: 250  QAILKSYMATGSDPSKPEKFLAYMAPSPDELSKDIYDENEDTSYSWVREYHWDVRGDDAD 309

Query: 1450 DPSTYVITFGQDAARYLPLPAKLTLH-RRARHNEDLD--NQFPVPSKVVVRNR----GLT 1608
            DP+TY+++F +  ARYLPLP KL L  +RA+     D    FPVPSKV VR R     + 
Sbjct: 310  DPTTYLVSFNKTDARYLPLPTKLLLRKKRAKEGRSSDEVEHFPVPSKVTVRQRPNVAAIE 369

Query: 1609 HKEEEVRDAGRARLMEGHANVVRSISGAKR-MASDDSIHRSHQKLQRLEETEQNLSAEED 1785
             K+EEV  + +           R +S +KR +  +D + RS++ +Q  +  +Q+  AE++
Sbjct: 370  LKDEEVYSSSK-----------RGVSSSKRGVDMEDGLGRSYKGVQD-QHMDQSSGAEDE 417

Query: 1786 MSE 1794
            MS+
Sbjct: 418  MSD 420


>XP_008794837.1 PREDICTED: protein PAF1 homolog [Phoenix dactylifera]
          Length = 663

 Score =  359 bits (922), Expect = e-111
 Identities = 211/487 (43%), Positives = 283/487 (58%), Gaps = 17/487 (3%)
 Frame = +1

Query: 190  PNSHWGSSSATPSKAQNAPHGSNHRGHSSSVPQPKLPMTPAKLKVPSPMPARPTPHRGSG 369
            P+SH  S+ + P+K   APH       S  + Q K P  P    V +P   R   H G G
Sbjct: 166  PSSH--STQSMPAK--EAPHPGRQPMPSIPLKQQKPPSGPP---VAAPPAGRDAAHPG-G 217

Query: 370  PSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVSSATKALLDKRSLETPAH------- 528
            P+                                +  +   +L K  +    +       
Sbjct: 218  PNGPSGRVETEEERRARKRKEYEKQKMENKRQQMLKQSQATVLQKTQMLASGNARPHGSM 277

Query: 529  -GDGKVDKNSQN--AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTK 699
             G   V++ +    + E+V+N+L+KPTTF+CK+ FRNELPDPTAQPKLL+ NT+KDRYTK
Sbjct: 278  AGSRTVERRTTPFLSGERVENRLKKPTTFLCKMKFRNELPDPTAQPKLLAVNTDKDRYTK 337

Query: 700  YAVTSLEKSYKPKLYVEXXXXXXXXXXXXSVYKSPDVMQXXXXXXXXXXXXX-AGTPNKL 876
            Y +TSLEK +KP+LYVE            SVY  P V                  TP K 
Sbjct: 338  YTITSLEKMHKPRLYVEQDLGIPLDLLDASVYNPPKVRPPLASEDQELLRDDEVATPIKR 397

Query: 877  EGIRRKERPTDTGFSWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNR 1056
            EGI++K+RPTD G SWLVKTQYIS +S + T+ + T+KQA+E RE+RE  +  L++LNNR
Sbjct: 398  EGIKKKDRPTDKGVSWLVKTQYISPLSTDVTKLSLTEKQAKEMRENREGRNAFLENLNNR 457

Query: 1057 EKQIMSIEESFRAAKSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEK 1233
            EKQI +IEESF AA+  P+HQTN  L+ VEI+PLLP+FDR++D+  +  FDG+ T + E+
Sbjct: 458  EKQIQAIEESFEAAQLPPIHQTNPKLQAVEILPLLPNFDRYEDQFAMLTFDGDPTADAEQ 517

Query: 1234 YNKLDHTIRDELESRAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTW 1407
            YNKL ++IRDE ES+AI+KSFV  G DP+  +KFL+YMVP  +EL          ISY+W
Sbjct: 518  YNKLHNSIRDEHESQAIVKSFVANGSDPTKPEKFLAYMVPAPDELSKDMYDENEDISYSW 577

Query: 1408 LREYRWKLLPEKTKDPSTYVITFGQDAARYLPLPAKLTLH-RRARHNE--DLDNQFPVPS 1578
            +REY W +  +   DP+TY++TF   AARYLPLP +L L  +RA+     D    FPVPS
Sbjct: 578  VREYHWDVRGDDADDPTTYLVTFDNKAARYLPLPTRLVLQKKRAKEGRFGDETEHFPVPS 637

Query: 1579 KVVVRNR 1599
            +V VR R
Sbjct: 638  RVTVRRR 644


>XP_012470138.1 PREDICTED: RNA polymerase II-associated factor 1 homolog isoform X1
            [Gossypium raimondii] KJB18584.1 hypothetical protein
            B456_003G061700 [Gossypium raimondii]
          Length = 671

 Score =  359 bits (921), Expect = e-111
 Identities = 200/422 (47%), Positives = 268/422 (63%), Gaps = 11/422 (2%)
 Frame = +1

Query: 562  AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKL 741
            + E+++N+L+KPTTF+CKL FRNELPDP AQPKL++   +KDR+TKY +TSLEK YKPKL
Sbjct: 265  SGERIENRLKKPTTFLCKLKFRNELPDPCAQPKLMALKKDKDRFTKYTITSLEKMYKPKL 324

Query: 742  YVEXXXXXXXXXXXXSVYKSPDVM-QXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGF 918
             VE            SVY  P V                A TP K +GIRRKERPTD G 
Sbjct: 325  IVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEELLRDDVAITPIKKDGIRRKERPTDKGV 384

Query: 919  SWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAA 1098
            SWLVKTQYIS +S+E+T+Q+ T+KQA+E RE +    ++L++LNNRE+QI  IE SF A+
Sbjct: 385  SWLVKTQYISPLSMESTKQSLTEKQAKELRELKG-GRNLLENLNNRERQIKEIEASFEAS 443

Query: 1099 KSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELES 1275
            K RPVH TN NLEPVE++PLLPDFDR +D+ V+  FDG  T + E ++KL  ++RDE ES
Sbjct: 444  KLRPVHATNKNLEPVEVMPLLPDFDRHNDQFVMVAFDGAPTADSEIFSKLHDSVRDEHES 503

Query: 1276 RAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTK 1449
            RAIMKS+V P  DP+  +KFL+YMVP L+EL          ISY+W+REY W +  +   
Sbjct: 504  RAIMKSYVAPSSDPANPEKFLAYMVPSLDELSKDMYDELEDISYSWVREYHWDVRGDGAN 563

Query: 1450 DPSTYVITFGQDAARYLPLPAKLTLH-RRARHNEDLD--NQFPVPSKVVVRNR----GLT 1608
            DP+TY+++F +  ARY+PLP KL L  +RAR     D    FP+PS++ VR R     + 
Sbjct: 564  DPTTYLVSFDEGDARYVPLPTKLNLRKKRAREGRSGDEIEHFPIPSRITVRRRSTAAAIE 623

Query: 1609 HKEEEVRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDM 1788
             KE EV    R R              ++R+ ++D + R  +KL R ++  Q    E+D 
Sbjct: 624  LKEPEVYSNTRDR-------------NSRRLDAEDGVGRP-RKLARHQDVGQYSGDEDDF 669

Query: 1789 SE 1794
            S+
Sbjct: 670  SD 671


>XP_017611456.1 PREDICTED: protein PAF1 homolog [Gossypium arboreum]
          Length = 676

 Score =  358 bits (920), Expect = e-111
 Identities = 199/422 (47%), Positives = 268/422 (63%), Gaps = 11/422 (2%)
 Frame = +1

Query: 562  AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKL 741
            + E+++N+L+KPTTF+CKL FRNELPDP+AQPKL+S   +KDR+TKY +TSLEK YKPKL
Sbjct: 266  SGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLMSLKKDKDRFTKYTITSLEKMYKPKL 325

Query: 742  YVEXXXXXXXXXXXXSVYKSPDV-MQXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGF 918
            +VE            SVY  P + +              A TP K +GIRRKERPTD G 
Sbjct: 326  FVEPDLGIPLDLLDLSVYNPPSIRLPLAPEDEELLRDDAAITPVKRDGIRRKERPTDKGV 385

Query: 919  SWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAA 1098
            SWLVKTQYIS +S+E+T+Q+ T+KQA+E RE +    ++L +LNNRE+QI  I  SF A+
Sbjct: 386  SWLVKTQYISPLSMESTKQSLTEKQAKELRELKG-GRNLLVNLNNRERQIKEIVASFEAS 444

Query: 1099 KSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELES 1275
            K RPVH TN NLEPVE++PLLPDFDR+DD+ V+  FD   T + E ++KL  ++RDE ES
Sbjct: 445  KLRPVHATNKNLEPVEVMPLLPDFDRYDDQFVMVAFDNAPTADSEIFSKLHGSVRDEHES 504

Query: 1276 RAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTK 1449
            RAIMKS+  P  DP   +KFL+YMVP L EL          I+Y+W+REY W +  +   
Sbjct: 505  RAIMKSYQAPSSDPVNPEKFLAYMVPSLGELSKDMYDEHEDITYSWVREYHWDVRGDDAN 564

Query: 1450 DPSTYVITFGQDAARYLPLPAKLTLH-RRARHNEDLD--NQFPVPSKVVVRNR----GLT 1608
            DP+TY+++F +  ARY+PLP KL L  +RAR     D    FPVP+++ VR R     + 
Sbjct: 565  DPTTYLVSFDEGEARYVPLPTKLNLRKKRAREGRSGDEIEHFPVPARITVRRRPTVAAIE 624

Query: 1609 HKEEEVRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDM 1788
              E EV    R  +         S S   R+ ++D + R H KL R ++ +Q   AE+D+
Sbjct: 625  LHEPEVYSNSRGGI---------SSSKMARLDAEDGLGRPH-KLSRHQDIDQYSGAEDDL 674

Query: 1789 SE 1794
            S+
Sbjct: 675  SD 676


>XP_016743112.1 PREDICTED: protein PAF1 homolog, partial [Gossypium hirsutum]
          Length = 642

 Score =  357 bits (917), Expect = e-111
 Identities = 195/418 (46%), Positives = 266/418 (63%), Gaps = 7/418 (1%)
 Frame = +1

Query: 562  AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKL 741
            + E+++N+L+KPTTF+CKL FRNELPDP+AQPKL++   +KDR+TKY +TSLEK YKPKL
Sbjct: 236  SGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLMALKKDKDRFTKYTITSLEKMYKPKL 295

Query: 742  YVEXXXXXXXXXXXXSVYKSPDVM-QXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGF 918
            +VE            SVY  P V                A TP K +GIRRKERPTD G 
Sbjct: 296  FVEPDLGIPLDLLDLSVYNPPSVRPPLPPEDEELLHDDVAITPIKKDGIRRKERPTDKGV 355

Query: 919  SWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAA 1098
            SWLVKTQYIS +++E+ +Q+ T+KQA+E RE +    ++L++LNNRE+QI  IE SF A+
Sbjct: 356  SWLVKTQYISPLNMESMKQSLTEKQAKELRELKG-GRNLLENLNNRERQIKEIEASFEAS 414

Query: 1099 KSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELES 1275
            K RPVH TN NLEP+E++PLLPDFDR +D+ V+  FDG  T + E ++KL  ++RDE ES
Sbjct: 415  KLRPVHATNKNLEPIEVMPLLPDFDRHNDQFVMVAFDGAPTADSEIFSKLHGSVRDEHES 474

Query: 1276 RAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTK 1449
            RAIMKS+V P  DP+  DKFL+YMVP L+EL          ISY+W+REY W +  +   
Sbjct: 475  RAIMKSYVAPSSDPANPDKFLAYMVPSLDELSKDMYDELEDISYSWVREYHWDVRGDGAN 534

Query: 1450 DPSTYVITFGQDAARYLPLPAKLTLH-RRARHNEDLD--NQFPVPSKVVVRNRGLTHKEE 1620
            DP+TY+++F +  A Y+PLP KL L  +RAR     D    FP+PS++ VR R       
Sbjct: 535  DPTTYLVSFDEGDACYVPLPTKLNLRKKRAREGRSGDEIEHFPIPSRITVRRRS------ 588

Query: 1621 EVRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDMSE 1794
                A    L E         S ++R+ ++D + R+ +KL R ++  Q    E+D S+
Sbjct: 589  ---TAAAIELQEPEVYSNTRDSNSRRLDAEDGVRRT-RKLARHQDVGQYSGHEDDFSD 642


>XP_017622922.1 PREDICTED: protein PAF1 homolog [Gossypium arboreum] XP_017622923.1
            PREDICTED: protein PAF1 homolog [Gossypium arboreum]
            XP_017645463.1 PREDICTED: protein PAF1 homolog [Gossypium
            arboreum] XP_017645464.1 PREDICTED: protein PAF1 homolog
            [Gossypium arboreum] KHF99389.1 RNA polymerase
            II-associated factor 1 [Gossypium arboreum]
          Length = 673

 Score =  358 bits (919), Expect = e-110
 Identities = 195/418 (46%), Positives = 266/418 (63%), Gaps = 7/418 (1%)
 Frame = +1

Query: 562  AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKL 741
            + E+++N+L+KPTTF+CKL FRNELPDP+AQPKL++   +KDR+TKY +TSLEK YKPKL
Sbjct: 267  SGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLMALKKDKDRFTKYTITSLEKMYKPKL 326

Query: 742  YVEXXXXXXXXXXXXSVYKSPDVM-QXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGF 918
            +VE            SVY  P V                A TP K +GIRRKERPTD G 
Sbjct: 327  FVEPDLGIPLDLLDLSVYNPPSVRPPLPPEDEELLHDDVAITPIKKDGIRRKERPTDKGV 386

Query: 919  SWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAA 1098
            SWLVKTQYIS +++E+ +Q+ T+KQA+E RE +    ++L++LNNRE+QI  IE SF  +
Sbjct: 387  SWLVKTQYISPLNMESMKQSLTEKQAKELRELKG-GRNLLENLNNRERQIKEIEASFEES 445

Query: 1099 KSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELES 1275
            K RPVH TN NLEP+E++PLLPDFDR +D+ V+  FDG  T + E ++KL  ++RDE ES
Sbjct: 446  KLRPVHATNKNLEPIEVMPLLPDFDRHNDQFVMVAFDGAPTADSEIFSKLHGSVRDEHES 505

Query: 1276 RAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTK 1449
            RAIMKS+V P  DP+  DKFL+YMVP L+EL          ISY+W+REY W +  +   
Sbjct: 506  RAIMKSYVAPSSDPANPDKFLAYMVPSLDELSKDMYDELEDISYSWVREYHWDVRGDGAN 565

Query: 1450 DPSTYVITFGQDAARYLPLPAKLTLH-RRARHNEDLD--NQFPVPSKVVVRNRGLTHKEE 1620
            DP+TY+++F +  ARY+PLP KL L  +RAR     D    FP+PS++ VR R       
Sbjct: 566  DPTTYLVSFNEGDARYVPLPTKLNLRKKRAREGRSGDEIEHFPIPSRITVRRRS------ 619

Query: 1621 EVRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDMSE 1794
                A    L E         S ++R+ ++D + R+ +KL R ++  Q    E+D S+
Sbjct: 620  ---TAAAIELQEPEVYSNTRDSNSRRLDAEDGVGRT-RKLARHQDVGQYSGHEDDFSD 673


>XP_016672067.1 PREDICTED: protein PAF1 homolog [Gossypium hirsutum]
          Length = 667

 Score =  358 bits (918), Expect = e-110
 Identities = 198/422 (46%), Positives = 269/422 (63%), Gaps = 11/422 (2%)
 Frame = +1

Query: 562  AAEKVDNKLRKPTTFVCKLVFRNELPDPTAQPKLLSTNTNKDRYTKYAVTSLEKSYKPKL 741
            + E+++N+L+KPTTF+CKL FRNELPDP+AQPKL+S   +KDR+TKY +TSLEK YKPKL
Sbjct: 257  SGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLMSLKKDKDRFTKYTITSLEKMYKPKL 316

Query: 742  YVEXXXXXXXXXXXXSVYKSPDV-MQXXXXXXXXXXXXXAGTPNKLEGIRRKERPTDTGF 918
            +VE            SVY  P + +              A TP K +GIRRKERPTD G 
Sbjct: 317  FVEPDLGIPLDLLDLSVYNPPSIRLPLAPEDEELLRDDAAITPVKRDGIRRKERPTDKGV 376

Query: 919  SWLVKTQYISSVSLENTRQAHTDKQARERRESREFHHDVLDSLNNREKQIMSIEESFRAA 1098
            SWLVKTQYIS +S+E+T+Q+ T+KQA+E RE +    ++L +LNNRE+QI  IE SF A+
Sbjct: 377  SWLVKTQYISPLSMESTKQSLTEKQAKELRELKG-GRNLLVNLNNRERQIKEIEASFEAS 435

Query: 1099 KSRPVHQTNSNLEPVEIIPLLPDFDRWDDELVLALFDGEAT-EEEKYNKLDHTIRDELES 1275
            K RPVH TN NLEPVE++PLLPDF+R+DD+ V+  FD   T + E ++KL  ++RDE ES
Sbjct: 436  KLRPVHATNKNLEPVEVMPLLPDFERYDDQFVMVAFDNAPTADSEIFSKLHGSVRDEHES 495

Query: 1276 RAIMKSFVLPGEDPSASDKFLSYMVPGLEELMN--XXXXXXISYTWLREYRWKLLPEKTK 1449
            RAIMKS+     DP+  +KFL+YMVP L EL          I+Y+W+REY W +  +   
Sbjct: 496  RAIMKSYQASSSDPANPEKFLAYMVPSLGELSKDMYDEHEDITYSWVREYHWDVRGDDAN 555

Query: 1450 DPSTYVITFGQDAARYLPLPAKLTLH-RRARHNEDLD--NQFPVPSKVVVRNR----GLT 1608
            DP+TY+++F +  ARY+PLP KL L  +RAR     D    FPVP+++ VR R     + 
Sbjct: 556  DPTTYLVSFDEGEARYVPLPTKLNLRKKRAREGRSGDEIEHFPVPARITVRRRPTVAAIE 615

Query: 1609 HKEEEVRDAGRARLMEGHANVVRSISGAKRMASDDSIHRSHQKLQRLEETEQNLSAEEDM 1788
              E EV    R  +         S S   R+ ++D + R H KL R ++ +Q   AE+D+
Sbjct: 616  LHEPEVYSNSRGGI---------SSSKMARLDAEDGLGRPH-KLSRHQDIDQYSGAEDDL 665

Query: 1789 SE 1794
            S+
Sbjct: 666  SD 667