BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00007045
         (802 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001775171.1 predicted protein [Physcomitrella patens] EDQ6003...   112   2e-24
XP_001782576.1 predicted protein [Physcomitrella patens] EDQ5256...   108   6e-23
GAQ84192.1 protein with ubiquitin conjugating enzyme domain [Kle...    67   6e-09
CEM24691.1 unnamed protein product [Vitrella brassicaformis CCMP...    66   2e-08
OMJ65734.1 hypothetical protein SteCoe_37708 [Stentor coeruleus]       65   2e-08
CDW86592.1 uba ts-n domain containing protein [Stylonychia lemnae]     65   4e-08
EJY79714.1 UBA/TS-N domain containing protein [Oxytricha trifallax]    64   5e-08

>XP_001775171.1 predicted protein [Physcomitrella patens] EDQ60032.1 predicted
            protein [Physcomitrella patens]
          Length = 1110

 Score =  112 bits (281), Expect = 2e-24
 Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 46/305 (15%)
 Frame = +1

Query: 16   VAL*MDMRGVLYDSKKLASALGFPFEESNKLIFEFIFTPNEWNSQEELRVLKNLRFDAFV 195
            V L  D+ G++   +++A+ LG   +E   L  EF  + N W ++  LR +K L+++   
Sbjct: 239  VQLQFDLVGMV--DERIAAGLGLTLDEPVSLNLEF--SKNMW-TETTLRSIKMLKYERIY 293

Query: 196  KRNMEHSFRDSVELDEKDEDVFKSLKRI-----KQYGVRVVVPELVKGFL------DAQS 342
                    R S     + +D+ + L+       + YG+ V++PEL   F        ++S
Sbjct: 294  ATQFS---RISEARIAEPDDIDRFLEASDGAGHRSYGLDVLLPELTSRFFAVLNRQGSES 350

Query: 343  KGI----------VKDENLFVSVFEYVAKGIRQLRNCCILCKAELP-ELSRMFFCDSELC 489
             G           V ++N F+ +   +   +R L   C++C  +L   ++RM  CD +LC
Sbjct: 351  SGDYVHMEGLHENVNNKNPFIGLALAICHQLRLLPGRCLICWKKLSCSVTRMRTCDEDLC 410

Query: 490  LFNFEDFGIGGDVLQELQDTM-LAEFQIATARDSCNSRRDVFEPYPTFLLRSAEVRKRSG 666
            L+ FE+ G+G  VL E++ +  L E +++ A  +  S RDVFEP+P FLL+  E+R RSG
Sbjct: 411  LYRFEELGLGVSVLDEVKSSPELVEVELSLAHTALESARDVFEPFPAFLLQDKEIRGRSG 470

Query: 667  FFS----------------------ERSDDKDHYK-NKDLDLMSTIMSSFPPVAEMQKCE 777
            +FS                      E  D+ +  K NK+ +L+  I++S PP+ ++QKC 
Sbjct: 471  WFSNDTVRESASKLTNLTQKMWDDLEDMDESEPLKSNKNSELLREILASIPPIDKIQKCA 530

Query: 778  TETDL 792
             E  L
Sbjct: 531  DERSL 535


>XP_001782576.1 predicted protein [Physcomitrella patens] EDQ52565.1 predicted
            protein [Physcomitrella patens]
          Length = 939

 Score =  108 bits (269), Expect = 6e-23
 Identities = 94/314 (29%), Positives = 153/314 (48%), Gaps = 54/314 (17%)
 Frame = +1

Query: 13   VVAL*MDMRGVLYDSKKLASALGFPFEESNKLIFEFIFTPNEWNSQEELRVLKNLRFDAF 192
            VV L  D+ G++ D  ++A+ LG    E   L  EF  + N W+          L++  F
Sbjct: 238  VVELQFDLVGIIDD--RVAAGLGLSINEHVSLSLEF--SKNTWSET-------TLQWTEF 286

Query: 193  VKRNMEHSFRDSVELDEKD---EDVFKSLKRI-----KQYGVRVVVPELVKGFLDAQS-- 342
              +N+  S +DS  ++ +D   +++ + L+       + YG+ V+ P+L + F  A +  
Sbjct: 287  ECQNITVS-QDSKLIEARDTERDEIDRYLESSFGAGHRSYGLDVLFPDLTRKFFAALNHH 345

Query: 343  -----------KGIVKDENL-----FVSVFEYVAKGIRQLRNCCILCKAELP-ELSRMFF 471
                       +GI  DENL     F+ +   ++  +++L  CCI+C  E P  ++RM  
Sbjct: 346  GSAQTGNYQYMEGI--DENLNNKNPFLGLALAISHQLKRLPQCCIICWREHPFSVTRMRT 403

Query: 472  CDSELCLFNFEDFGIGGDVLQELQDTM-LAEFQIATARDSCNSRRDVFEPYPTFLLRSAE 648
            CDS+LCL  FE+ G+G  VL E++ +  L E ++A A  +  S+RDVFEP+P F L+  E
Sbjct: 404  CDSDLCLHLFEELGLGVSVLGEVKSSPELVEMEMAFAAAALRSKRDVFEPFPAFSLQKDE 463

Query: 649  VRKRSGFFSER------SDDKDHYK--------------------NKDLDLMSTIMSSFP 750
            +R RSG+FS        S  K+  K                    NK+   +S  ++S P
Sbjct: 464  LRLRSGWFSNNNMSETASRSKNRIKTAYQMPILGAVEDEKSAVQSNKNTKQLSEALASIP 523

Query: 751  PVAEMQKCETETDL 792
            P+  +QKC  E  L
Sbjct: 524  PINVLQKCADERSL 537


>GAQ84192.1 protein with ubiquitin conjugating enzyme domain [Klebsormidium
           flaccidum]
          Length = 1078

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
 Frame = +1

Query: 328 LDAQSKGIVKDENLFVSVFEYVAKGIRQLRNCCILCKAELPELS---RMFFCDSELCLFN 498
           L    + +  + N+F +  + V   + ++   C +C+   P  S   R+  C+++LCL+ 
Sbjct: 406 LGCTDEALAVEGNVFTAALQMVGAKLGKVATWCPVCRQ--PHASPGMRLRPCNNDLCLYR 463

Query: 499 FEDFGIGGDVLQE-LQDTMLAEFQIATARDSCNSRRD--VFEPYPTFLLRSAEVRKRSGF 669
           FE+ G+G  +L E L++  L E ++A A ++  S R   VFEP+P+FLL   E R R+G+
Sbjct: 464 FEELGLGAAILPEVLENAELVELELAMAANAAASGRAEAVFEPFPSFLLEGRENRGRAGW 523

Query: 670 FS 675
           F+
Sbjct: 524 FN 525


>CEM24691.1 unnamed protein product [Vitrella brassicaformis CCMP3155]
          Length = 1350

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
 Frame = +1

Query: 364  NLFVSVFEYVAKGIRQLRNCCILCKAELPEL--SRMFFCDSELCLFNFEDFGIGGDVLQE 537
            N F    E++ K    +   C++C     ++   ++F C++ELC+F++E+F     V  E
Sbjct: 651  NFFSDFVEHIGKFFANIHKYCVICFNPHADVLCRKLFPCNNELCIFSYEEFV--ATVYAE 708

Query: 538  LQDTM-LAEFQIATARDSCNSRRDVFEPYPTFLLRSAEVRKRSGFFSERS---------- 684
            LQD   L +  +  A  +CNS+    EP+P   L+  E+R RSG +   +          
Sbjct: 709  LQDDKDLVDLHLFLAGCACNSQDTYVEPFPPHFLKRHEIRTRSGIYDNPNALKSGTARAG 768

Query: 685  -------DDKDHYKNKDLDLMSTIMSSFPPVAEMQKCETE 783
                      +   NKDL  M       P V E+  C +E
Sbjct: 769  YAYGGGQPQNNPDSNKDLYKMKRCFQKLPSVKELAACSSE 808


>OMJ65734.1 hypothetical protein SteCoe_37708 [Stentor coeruleus]
          Length = 608

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
 Frame = +1

Query: 310 ELVKGFLDAQSKGIVKDENLFVSVFEYVAKGIRQLRNCCILC-KAELPELSRMFFCDSEL 486
           E +  F    +  I+   N F ++  Y+   I+   N C +C K  + +  R+  C +E+
Sbjct: 334 ENLSKFTGEYASDIIVCNNFFYNLLFYLRDRIQNCTNYCFICFKRHVVDSYRLRPCTAEI 393

Query: 487 CLFNFEDFGIGGDVLQELQDTMLAEFQIATARDSCNSRRD--VFEPYPTFLLRSAEVRKR 660
           C F FE+        +   ++ L    ++ A +S  S R   VFEP+P+FLL+  ++R +
Sbjct: 394 CEFRFEEISGISLYAEICSNSDLVFLDLSFASESVASARSSTVFEPFPSFLLKKNQIRGK 453

Query: 661 SGFFSERSDDKDHYKNKDLDLMSTIMSSFPPVAEMQKCETE 783
           SGF S  S   +   NKD+ L+  +++  P +  ++   T+
Sbjct: 454 SGFLS-GSYSAEMDNNKDITLLRQLITQMPDINVLKNSCTD 493


>CDW86592.1 uba ts-n domain containing protein [Stylonychia lemnae]
          Length = 1055

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
 Frame = +1

Query: 304 VPELVKGFLDAQSKGIVKDENLFVSVFEYVAKGIRQLRNCCILCKAELPELS-RMFFCDS 480
           + E V G    Q + + K +N  + +  ++ + I    + C+LC + L   S ++  C S
Sbjct: 426 IAEDVTGVFLDQKQQVPKTKNKIIKMMLFITELIESATSSCLLCHSPLVSDSIKLRTCGS 485

Query: 481 ELCLFNFEDFGIGGDVLQELQ-DTMLAEFQIATARDSCNSRR--DVFEPYPTFLLRSAEV 651
           + C F FE+   GG +  E++ +T  A   I+ +  +  S R   VFEP+PTF L+  E+
Sbjct: 486 DHCEFTFEE-NFGGTIFSEIKYNTEEAILDISLSAKALFSSRAGQVFEPFPTFFLKGTEM 544

Query: 652 RKRSGFF-----------SERSDDKDHYKNKDLDLMSTIMSSFPPVAEM-QKCETETDLM 795
           R + G             +  +  K   KNKD+  M  I+   P V  + QK E E  L 
Sbjct: 545 RGKRGNLDLIQQAQKLGQTVSNSKKVDEKNKDIQSMINILIKLPKVQTLIQKIENEQQLR 604

Query: 796 FK 801
            K
Sbjct: 605 AK 606


>EJY79714.1 UBA/TS-N domain containing protein [Oxytricha trifallax]
          Length = 1088

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 59/185 (31%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
 Frame = +1

Query: 298  VVVPELVK-GFLDAQSKGIVKDENLFVSVFEYVAKGIRQLRNCCILCKAELP-ELSRMFF 471
            ++ P LVK    D     +   +N  V +  Y+   + +    CILC  +L  E  ++  
Sbjct: 449  LIEPSLVKRASKDYSIMNLPHTKNQLVRMMLYICDRLDKSTRYCILCHNQLETESIKLRA 508

Query: 472  CDSELCLFNFEDFGIGGDVLQELQDTMLAEF-QIATARDSCNSRR--DVFEPYPTFLLRS 642
            C SE C F FE+   GG +  EL+      F  I+ A  +  S R   VFEP+PTF L S
Sbjct: 509  CTSEHCEFIFEE-NFGGTIFPELKYNQHEAFLNISLAAKALFSTRAGSVFEPFPTFFLIS 567

Query: 643  AEVRKRSG--------FFSERSDDKDHY---KNKDLDLMSTIMSSFPPVAEMQK-CETET 786
             E+R + G               +KDH    KNKDL  M  I    PP   + K   +E 
Sbjct: 568  NELRTKRGNLDVIQKARIEGNQVNKDHMVNEKNKDLAKMLEIFQKIPPYMTLMKDVNSEA 627

Query: 787  DLMFK 801
            DL+ K
Sbjct: 628  DLICK 632