BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00006805
         (238 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009595921.1 PREDICTED: DNA-directed RNA polymerase II subunit...    67   2e-12
XP_019226308.1 PREDICTED: DNA-directed RNA polymerase II subunit...    67   2e-12
XP_016465212.1 PREDICTED: DNA-directed RNA polymerase II subunit...    67   2e-12
XP_009781522.1 PREDICTED: DNA-directed RNA polymerase II subunit...    67   2e-12
XP_001766952.1 predicted protein [Physcomitrella patens] EDQ6811...    67   2e-12
XP_016577998.1 PREDICTED: DNA-directed RNA polymerase II subunit...    67   3e-12
XP_013610554.1 PREDICTED: DNA-directed RNA polymerase II subunit...    65   4e-12
KYP41544.1 DNA-directed RNA polymerase II subunit RPB4 [Cajanus ...    66   4e-12
AFK39331.1 unknown [Lotus japonicus]                                   65   5e-12
KDO59898.1 hypothetical protein CISIN_1g0325682mg, partial [Citr...    64   6e-12
XP_010108561.1 DNA-directed RNA polymerase II subunit [Morus not...    65   6e-12
XP_002522014.1 PREDICTED: DNA-directed RNA polymerase II subunit...    66   6e-12
XP_006579388.1 PREDICTED: uncharacterized protein LOC100527704 i...    65   9e-12
XP_006361114.1 PREDICTED: DNA-directed RNA polymerase II subunit...    65   9e-12
OAY44344.1 hypothetical protein MANES_08G141900 [Manihot esculen...    65   1e-11
OAY42008.1 hypothetical protein MANES_09G146500 [Manihot esculen...    65   1e-11
XP_002282413.1 PREDICTED: DNA-directed RNA polymerase II subunit...    65   1e-11
XP_013606250.1 PREDICTED: DNA-directed RNA polymerase II subunit...    65   1e-11
XP_010261089.1 PREDICTED: DNA-directed RNA polymerase II subunit...    65   1e-11
XP_009587966.1 PREDICTED: DNA-directed RNA polymerase II subunit...    65   1e-11

>XP_009595921.1 PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Nicotiana
           tomentosiformis]
          Length = 137

 Score = 67.0 bits (162), Expect = 2e-12
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMNSEV+ +LE K++Q++   +DPS QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNSEVSLILEHKYEQIQQISDDPSNQVSQVFEKSLQYVK 63


>XP_019226308.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Nicotiana
           attenuata]
          Length = 138

 Score = 67.0 bits (162), Expect = 2e-12
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMNSEV+ +LE K++Q++   +DPS QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNSEVSLILEHKYEQIQQMSDDPSNQVSQVFEKSLQYVK 63


>XP_016465212.1 PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Nicotiana
           tabacum]
          Length = 138

 Score = 67.0 bits (162), Expect = 2e-12
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMNSEV+ +LE K++Q++   +DPS QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNSEVSLILEHKYEQIQQMSDDPSNQVSQVFEKSLQYVK 63


>XP_009781522.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Nicotiana
           sylvestris] XP_016497278.1 PREDICTED: DNA-directed RNA
           polymerase II subunit 4 [Nicotiana tabacum]
          Length = 138

 Score = 67.0 bits (162), Expect = 2e-12
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMNSEV+ +LE K++Q++   +DPS QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNSEVSLILEHKYEQIQQMSDDPSNQVSQVFEKSLQYVK 63


>XP_001766952.1 predicted protein [Physcomitrella patens] EDQ68118.1 predicted
           protein [Physcomitrella patens]
          Length = 142

 Score = 67.0 bits (162), Expect = 2e-12
 Identities = 32/59 (54%), Positives = 46/59 (77%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE DA+ELKLG  F  AKCLMN+EVA +L++K++QL+   +DPS Q+S+VF+  L+Y +
Sbjct: 10  EEEDASELKLGEDFVKAKCLMNAEVALVLQRKYEQLQQLADDPSSQISQVFERSLQYVR 68


>XP_016577998.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Capsicum
           annuum]
          Length = 138

 Score = 66.6 bits (161), Expect = 3e-12
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +LE K++QL+   +DP+ Q+S+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTTQISQVFEKSLQYVK 63


>XP_013610554.1 PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Brassica
           oleracea var. oleracea]
          Length = 88

 Score = 65.1 bits (157), Expect = 4e-12
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EV+ +LE K++QL++   DP  QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQLVSEDPMNQVSQVFEKSLQYVK 63


>KYP41544.1 DNA-directed RNA polymerase II subunit RPB4 [Cajanus cajan]
          Length = 138

 Score = 66.2 bits (160), Expect = 4e-12
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +LE K++QL+   +DP+ Q+S+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPTSQISQVFEKSLQYVK 63


>AFK39331.1 unknown [Lotus japonicus]
          Length = 83

 Score = 64.7 bits (156), Expect = 5e-12
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EV+ +LE K++QL+ + +DP  QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQYVK 63


>KDO59898.1 hypothetical protein CISIN_1g0325682mg, partial [Citrus sinensis]
          Length = 78

 Score = 64.3 bits (155), Expect = 6e-12
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +L+ K++QL+   +DP  QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQYVK 63


>XP_010108561.1 DNA-directed RNA polymerase II subunit [Morus notabilis] EXC19704.1
           DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 121

 Score = 65.5 bits (158), Expect = 6e-12
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +LE K++QL+   +DP  QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVK 63


>XP_002522014.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Ricinus
           communis] EEF40418.1 DNA-directed RNA polymerase II,
           putative [Ricinus communis]
          Length = 138

 Score = 65.9 bits (159), Expect = 6e-12
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +A+ELK+G  F  AKCLMN EVA +LE K++QL+   NDP  QVS+VF+  L+Y K
Sbjct: 5   EEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQYVK 63


>XP_006579388.1 PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
           max] KHN34054.1 DNA-directed RNA polymerase II subunit
           RPB4 [Glycine soja] KRH59539.1 hypothetical protein
           GLYMA_05G189100 [Glycine max]
          Length = 138

 Score = 65.5 bits (158), Expect = 9e-12
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +LE K++QL+   +DP  QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVK 63


>XP_006361114.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Solanum
           tuberosum]
          Length = 138

 Score = 65.5 bits (158), Expect = 9e-12
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +LE K++QL+   +DP+ Q+S+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPTNQISQVFEKSLQYVK 63


>OAY44344.1 hypothetical protein MANES_08G141900 [Manihot esculenta] OAY44346.1
           hypothetical protein MANES_08G141900 [Manihot esculenta]
          Length = 138

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +LE K++QL+   +DP  QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQYVK 63


>OAY42008.1 hypothetical protein MANES_09G146500 [Manihot esculenta] OAY42009.1
           hypothetical protein MANES_09G146500 [Manihot esculenta]
          Length = 138

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +LE K++QL+   +DP  QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQYVK 63


>XP_002282413.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Vitis
           vinifera] CAN80281.1 hypothetical protein VITISV_017448
           [Vitis vinifera] CBI22042.3 unnamed protein product,
           partial [Vitis vinifera]
          Length = 138

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +LE K++QL+   +DP  QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQYVK 63


>XP_013606250.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Brassica
           oleracea var. oleracea]
          Length = 138

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EV+ +LE K++QL++   DP  QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQLVSEDPMNQVSQVFEKSLQYVK 63


>XP_010261089.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
           [Nelumbo nucifera]
          Length = 138

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +L++K++QL+   +DP  QVS+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQVSQVFEKSLQYVK 63


>XP_009587966.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
           [Nicotiana tomentosiformis] XP_009784988.1 PREDICTED:
           DNA-directed RNA polymerase II subunit 4-like [Nicotiana
           sylvestris] XP_016475546.1 PREDICTED: DNA-directed RNA
           polymerase II subunit 4-like [Nicotiana tabacum]
           XP_016501171.1 PREDICTED: DNA-directed RNA polymerase II
           subunit 4-like [Nicotiana tabacum] XP_019267657.1
           PREDICTED: DNA-directed RNA polymerase II subunit 4-like
           [Nicotiana attenuata] OIT34233.1 dna-directed rna
           polymerase ii subunit 4 [Nicotiana attenuata]
          Length = 138

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = +3

Query: 60  EELDAAELKLGGVFSGAKCLMNSEVAAMLEKKHQQLKVAFNDPSVQVSEVFKSCLEYAK 236
           EE +AAELK+G  F  AKCLMN EVA +LE K++QL+    DP+ Q+S+VF+  L+Y K
Sbjct: 5   EEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSEDPTNQISQVFEKSLQYVK 63