BLASTX nr result

ID: Ephedra29_contig00006415 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00006415
         (1198 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR18400.1 unknown [Picea sitchensis]                                  72   5e-12
ABK22057.1 unknown [Picea sitchensis]                                  65   2e-09

>ABR18400.1 unknown [Picea sitchensis]
          Length = 115

 Score = 72.4 bits (176), Expect = 5e-12
 Identities = 47/123 (38%), Positives = 67/123 (54%)
 Frame = -2

Query: 702 MSLACLSCHNVGRTDSDLRAYSLKAITEDERRWRPSTGCWXXXXXXXXXXXPQNFENSRS 523
           MSLACL+C NV RTDS  R YS ++  E++++   S GCW                +++ 
Sbjct: 1   MSLACLTCQNVLRTDS-CRNYSFRS-DEEQQQTGSSMGCW----------------SNKK 42

Query: 522 NNTNKNEENLRRTASADIYGSVGGTNRHCNVGEGYSSEAESSPRLVRSHAVRRHIFRDFN 343
           N      EN  RT  A +  S GG + +   G   +   +S+P+L+R HAVRR IFRD++
Sbjct: 43  NPQPPAAENTLRTRVAPVPPSGGGISNNIT-GSSSNQAPDSNPKLMRCHAVRRDIFRDWH 101

Query: 342 FED 334
           FED
Sbjct: 102 FED 104


>ABK22057.1 unknown [Picea sitchensis]
          Length = 103

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 44/126 (34%), Positives = 59/126 (46%)
 Frame = -2

Query: 702 MSLACLSCHNVGRTDSDLRAYSLKAITEDERRWRPSTGCWXXXXXXXXXXXPQNFENSRS 523
           MSLACL+C  V RTDSDLR+YS    ++ E+R     GCW                    
Sbjct: 1   MSLACLTCQVVQRTDSDLRSYSFN--SQQEQRCGAVVGCW-------------------- 38

Query: 522 NNTNKNEENLRRTASADIYGSVGGTNRHCNVGEGYSSEAESSPRLVRSHAVRRHIFRDFN 343
            +T    +      SA +   +  +N + N G         SPRL R HAVRR I RD+N
Sbjct: 39  -STKNPRQPPLEEVSARVVPVLSNSNSNNNQG-------PVSPRLTRCHAVRRDILRDWN 90

Query: 342 FEDVSD 325
           FE+ ++
Sbjct: 91  FEEFAE 96


Top