BLASTX nr result
ID: Ephedra29_contig00006178
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00006178
(826 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABK26221.1 unknown [Picea sitchensis] 114 7e-28
KNA16847.1 hypothetical protein SOVF_085480 [Spinacia oleracea] 112 2e-27
XP_007133034.1 hypothetical protein PHAVU_011G145700g [Phaseolus... 112 2e-27
XP_003540046.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 111 5e-27
ONK65939.1 uncharacterized protein A4U43_C06F2540 [Asparagus off... 110 8e-27
XP_014491439.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 110 1e-26
CDP05822.1 unnamed protein product [Coffea canephora] 110 2e-26
XP_020109204.1 ELAV-like protein 4 [Ananas comosus] 109 2e-26
XP_010931869.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 108 6e-26
OMP04540.1 hypothetical protein COLO4_09539 [Corchorus olitorius] 108 7e-26
XP_017433455.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 108 1e-25
OMO80498.1 hypothetical protein CCACVL1_12928 [Corchorus capsula... 108 1e-25
XP_010694287.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 107 1e-25
XP_003527307.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 107 1e-25
XP_011625875.1 PREDICTED: glycine-rich RNA-binding protein 3, mi... 107 2e-25
XP_013456734.1 RNA-binding (RRM/RBD/RNP motif) family protein [M... 107 2e-25
KHN28381.1 Glycine-rich RNA-binding protein 2 [Glycine soja] 107 3e-25
XP_007021155.2 PREDICTED: glycine-rich RNA-binding protein 4, mi... 107 3e-25
EOY12680.1 RNA-binding family protein [Theobroma cacao] 107 3e-25
XP_010267842.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 106 3e-25
>ABK26221.1 unknown [Picea sitchensis]
Length = 151
Score = 114 bits (284), Expect = 7e-28
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = +1
Query: 229 PEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDARIVADKNRKTGETKYYGFVTYATQE 408
P PKL+++GLS++TT+E LR AF KFG+V++AR+V DK G +K + FV YATQE
Sbjct: 42 PADPSPKLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDK--MNGVSKGFAFVRYATQE 99
Query: 409 EADKGRKGMDSKYLDGWVIFPEYVKP*PPK 498
EADKG++GMD K+LDGWVIF +Y +P PP+
Sbjct: 100 EADKGKEGMDGKFLDGWVIFADYARPRPPR 129
>KNA16847.1 hypothetical protein SOVF_085480 [Spinacia oleracea]
Length = 141
Score = 112 bits (280), Expect = 2e-27
Identities = 58/109 (53%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Frame = +1
Query: 172 RFLGTSPLANAPPPTQPLLPE-HRCPKLYINGLSRKTTEETLRAAFEKFGKVVDARIVAD 348
R L TSP PPP+ PE P L+++GLS++TT E L AF KFG+VVDA++V D
Sbjct: 18 RLLSTSPFNFKPPPSSNNPPEADPSPNLFVSGLSKRTTTEGLHEAFSKFGQVVDAKVVTD 77
Query: 349 KNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
R +G +K +GFV YAT EEA G++GM ++LDGWVIF EY KP PP
Sbjct: 78 --RVSGYSKGFGFVKYATTEEATVGKQGMHGEFLDGWVIFAEYAKPRPP 124
>XP_007133034.1 hypothetical protein PHAVU_011G145700g [Phaseolus vulgaris]
ESW05028.1 hypothetical protein PHAVU_011G145700g
[Phaseolus vulgaris]
Length = 144
Score = 112 bits (280), Expect = 2e-27
Identities = 58/113 (51%), Positives = 76/113 (67%)
Frame = +1
Query: 157 STSSLRFLGTSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDAR 336
++SS F+ T PL P P +P + L+++GLS++TT E LR F KFG+VV AR
Sbjct: 22 ASSSFPFVPTPPLGAVPSPARPTAEPNN--NLFVSGLSKRTTTEKLREEFSKFGEVVHAR 79
Query: 337 IVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
+V D R +G +K +GFV YAT EEA KG +GMD K+LDGWVIF EY +P PP
Sbjct: 80 VVTD--RVSGYSKGFGFVQYATLEEAAKGIEGMDGKFLDGWVIFAEYARPRPP 130
>XP_003540046.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Glycine max] KHN38590.1 Nucleolin [Glycine soja]
KRH25927.1 hypothetical protein GLYMA_12G139200 [Glycine
max]
Length = 145
Score = 111 bits (278), Expect = 5e-27
Identities = 58/113 (51%), Positives = 76/113 (67%)
Frame = +1
Query: 157 STSSLRFLGTSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDAR 336
++ S F+ T P P PT+P + P L+++GLS++TT E LR F KFG+VV AR
Sbjct: 22 ASPSFPFVPTPPPGATPTPTRPTAEPN--PNLFVSGLSKRTTTERLREEFAKFGEVVHAR 79
Query: 337 IVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
+V D R +G +K +GFV YAT EEA KG +GMD K+LDGWVIF EY +P PP
Sbjct: 80 VVTD--RVSGYSKGFGFVQYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPP 130
>ONK65939.1 uncharacterized protein A4U43_C06F2540 [Asparagus officinalis]
Length = 138
Score = 110 bits (276), Expect = 8e-27
Identities = 55/108 (50%), Positives = 71/108 (65%)
Frame = +1
Query: 172 RFLGTSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDARIVADK 351
R + + P PPP P P L+++GLS++TT E LR AF KFG+VV AR+V D
Sbjct: 12 RMISSIPGFTPPPPATPKPPAEPSTNLFVSGLSKRTTSEGLREAFAKFGQVVHARVVTD- 70
Query: 352 NRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
R +G +K +GFV YAT E+AD GR GMD ++LDGWVIF EY +P P
Sbjct: 71 -RVSGYSKGFGFVRYATLEDADAGRMGMDGQFLDGWVIFAEYARPRAP 117
>XP_014491439.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Vigna
radiata var. radiata]
Length = 144
Score = 110 bits (275), Expect = 1e-26
Identities = 57/113 (50%), Positives = 76/113 (67%)
Frame = +1
Query: 157 STSSLRFLGTSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDAR 336
++S+ F+ T P P P +P + L+++GLS++TT E LR F KFG+VV AR
Sbjct: 22 ASSTFPFIPTPPTGAVPTPARPTAEPNT--NLFVSGLSKRTTTEKLREEFSKFGEVVHAR 79
Query: 337 IVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
+VAD R +G +K +GFV YAT EEA KG +GMD K+LDGWVIF EY +P PP
Sbjct: 80 VVAD--RVSGYSKGFGFVQYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPP 130
>CDP05822.1 unnamed protein product [Coffea canephora]
Length = 147
Score = 110 bits (274), Expect = 2e-26
Identities = 59/114 (51%), Positives = 76/114 (66%)
Frame = +1
Query: 154 YSTSSLRFLGTSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDA 333
+STS F SP A PPP +P L+++GLS++TT E LR AFEKFG VVDA
Sbjct: 25 FSTSRFPFNQPSP-AQKPPPAEP------STNLFVSGLSKRTTNEGLRGAFEKFGNVVDA 77
Query: 334 RIVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
++V D R +G +K +GFV YAT +EA+ G KGMD ++LDGWVIF EY +P P
Sbjct: 78 KVVCD--RVSGFSKGFGFVRYATLQEAEAGIKGMDGQFLDGWVIFAEYARPRNP 129
>XP_020109204.1 ELAV-like protein 4 [Ananas comosus]
Length = 136
Score = 109 bits (273), Expect = 2e-26
Identities = 59/107 (55%), Positives = 73/107 (68%)
Frame = +1
Query: 175 FLGTSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDARIVADKN 354
F SP A APP P P L+++GLS++TT E LR AF KFG+VV AR+V D
Sbjct: 19 FTPPSP-AVAPPKADP------SPNLFVSGLSKRTTTEGLREAFAKFGRVVHARVVTD-- 69
Query: 355 RKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
R +G +K +GFV YAT EEA+KG +GMD K+LDGWVIF EY +P PP
Sbjct: 70 RMSGYSKGFGFVRYATVEEAEKGIEGMDGKFLDGWVIFAEYARPRPP 116
>XP_010931869.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Elaeis guineensis]
Length = 138
Score = 108 bits (270), Expect = 6e-26
Identities = 54/97 (55%), Positives = 67/97 (69%)
Frame = +1
Query: 205 PPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDARIVADKNRKTGETKYYG 384
PPP P L+I+GLS++TT E LR AF KFG+V AR+V D R +G +K +G
Sbjct: 20 PPPAAAAPAAEPSPNLFISGLSKRTTSEGLREAFSKFGQVFQARVVTD--RVSGYSKGFG 77
Query: 385 FVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
FV+YAT EEA +G KGMD K+LDGWVIF EY +P PP
Sbjct: 78 FVSYATVEEAAEGIKGMDGKFLDGWVIFAEYARPRPP 114
>OMP04540.1 hypothetical protein COLO4_09539 [Corchorus olitorius]
Length = 145
Score = 108 bits (270), Expect = 7e-26
Identities = 58/112 (51%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
Frame = +1
Query: 175 FLGTSPLANAPPPTQPLLP--EHRCPK--LYINGLSRKTTEETLRAAFEKFGKVVDARIV 342
F SP + PPPT P E P L+++GL+++T E LR AF +FG+VVDAR+V
Sbjct: 14 FSTNSPDSFNPPPTAGTTPGREQAPPSTNLFVSGLNKRTPTEKLREAFSEFGRVVDARVV 73
Query: 343 ADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PPK 498
D R +G +K +GFV YAT EEA+KGR+GMD K+LDGWVIF EY +P P +
Sbjct: 74 TD--RASGYSKGFGFVRYATIEEAEKGREGMDGKFLDGWVIFAEYARPRPER 123
>XP_017433455.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Vigna
angularis] BAT89875.1 hypothetical protein
VIGAN_06099200 [Vigna angularis var. angularis]
Length = 144
Score = 108 bits (269), Expect = 1e-25
Identities = 56/113 (49%), Positives = 76/113 (67%)
Frame = +1
Query: 157 STSSLRFLGTSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDAR 336
++S+ F+ T P P P +P + L+++GLS++TT E LR F KFG+VV AR
Sbjct: 22 ASSTFPFVPTPPAGAVPTPARPTAEPNT--NLFVSGLSKRTTTEKLREEFSKFGEVVYAR 79
Query: 337 IVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
+VAD R +G +K +GFV YAT E+A KG +GMD K+LDGWVIF EY +P PP
Sbjct: 80 VVAD--RVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 130
>OMO80498.1 hypothetical protein CCACVL1_12928 [Corchorus capsularis]
Length = 158
Score = 108 bits (270), Expect = 1e-25
Identities = 58/112 (51%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
Frame = +1
Query: 175 FLGTSPLANAPPPTQPLLP--EHRCPK--LYINGLSRKTTEETLRAAFEKFGKVVDARIV 342
F SP + PPPT P E P L+++GL+++T E LR AF +FG+VVDAR+V
Sbjct: 27 FSTNSPDSFNPPPTAGTTPGREQAPPSTNLFVSGLNKRTPTEKLREAFSQFGRVVDARVV 86
Query: 343 ADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PPK 498
D R +G +K +GFV YAT EEA+KGR+GMD K+LDGWVIF EY +P P +
Sbjct: 87 TD--RASGYSKGFGFVRYATIEEAEKGREGMDGKFLDGWVIFAEYARPRPER 136
>XP_010694287.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Beta
vulgaris subsp. vulgaris] KMS98549.1 hypothetical
protein BVRB_4g092380 [Beta vulgaris subsp. vulgaris]
Length = 143
Score = 107 bits (268), Expect = 1e-25
Identities = 55/113 (48%), Positives = 76/113 (67%)
Frame = +1
Query: 154 YSTSSLRFLGTSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDA 333
++TS+ F ++APPP +P P L+++GLS++TT E L+ AF KFG+VV A
Sbjct: 20 FATSAFNFTPPPSQSSAPPPAEPN------PNLFVSGLSKRTTTEGLQEAFSKFGEVVHA 73
Query: 334 RIVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*P 492
R+V D R +G +K +GFV YAT E+A G KGMD ++LDGWVIF EY +P P
Sbjct: 74 RVVTD--RVSGYSKGFGFVKYATIEDATAGIKGMDGQFLDGWVIFAEYARPRP 124
>XP_003527307.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Glycine max] KRH55574.1 hypothetical protein
GLYMA_06G263200 [Glycine max]
Length = 145
Score = 107 bits (268), Expect = 1e-25
Identities = 56/113 (49%), Positives = 75/113 (66%)
Frame = +1
Query: 157 STSSLRFLGTSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDAR 336
++SS F+ T P P PT+P + L+++GLS++T E LR F KFG+VV AR
Sbjct: 22 ASSSFPFVSTLPPGATPAPTRPTAEPNT--NLFVSGLSKRTNTERLREEFAKFGEVVHAR 79
Query: 337 IVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
+V D R +G +K +GFV YAT E+A KG +GMD K+LDGWVIF EY +P PP
Sbjct: 80 VVTD--RVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 130
>XP_011625875.1 PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial
isoform X2 [Amborella trichopoda]
Length = 130
Score = 107 bits (266), Expect = 2e-25
Identities = 54/97 (55%), Positives = 67/97 (69%)
Frame = +1
Query: 205 PPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDARIVADKNRKTGETKYYG 384
P PT P P L+++GLS++TT E LR AF KFG+VV AR+V D R +G +K +G
Sbjct: 26 PSPTPPPPPAEPSTNLFVSGLSKRTTTEGLREAFSKFGQVVHARVVTD--RVSGYSKGFG 83
Query: 385 FVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
FV YATQEEA +G GMD K+LDGWVIF EY +P P
Sbjct: 84 FVKYATQEEAAEGIAGMDGKFLDGWVIFAEYARPRTP 120
>XP_013456734.1 RNA-binding (RRM/RBD/RNP motif) family protein [Medicago
truncatula] AFK44512.1 unknown [Medicago truncatula]
KEH30765.1 RNA-binding (RRM/RBD/RNP motif) family
protein [Medicago truncatula]
Length = 144
Score = 107 bits (267), Expect = 2e-25
Identities = 58/119 (48%), Positives = 80/119 (67%), Gaps = 8/119 (6%)
Frame = +1
Query: 163 SSLRFLGTSPLANAP--------PPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFG 318
S R T+P+A++P PP+ + E L+++GLS++TT ETLR AF+KFG
Sbjct: 17 SFCRLFCTNPIASSPAFPSFSSSPPSARQMAEPST-NLFVSGLSKRTTTETLREAFQKFG 75
Query: 319 KVVDARIVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
+VV AR+V D R +G +K +GFV YAT E+A KG +GMD K+L+GWVIF EY +P PP
Sbjct: 76 EVVHARVVTD--RVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLEGWVIFAEYARPRPP 132
>KHN28381.1 Glycine-rich RNA-binding protein 2 [Glycine soja]
Length = 143
Score = 107 bits (266), Expect = 3e-25
Identities = 56/113 (49%), Positives = 75/113 (66%)
Frame = +1
Query: 157 STSSLRFLGTSPLANAPPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDAR 336
++SS F+ T P P PT+P + L+++GLS++T E LR F KFG+VV AR
Sbjct: 20 ASSSFPFVPTLPPGATPAPTRPTAEPNT--NLFVSGLSKRTNTERLREEFAKFGEVVHAR 77
Query: 337 IVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PP 495
+V D R +G +K +GFV YAT E+A KG +GMD K+LDGWVIF EY +P PP
Sbjct: 78 VVTD--RVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 128
>XP_007021155.2 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Theobroma cacao]
Length = 156
Score = 107 bits (267), Expect = 3e-25
Identities = 57/117 (48%), Positives = 76/117 (64%), Gaps = 9/117 (7%)
Frame = +1
Query: 175 FLGTSPLANAPPPTQPLLPEHRCP---------KLYINGLSRKTTEETLRAAFEKFGKVV 327
F TSP + PPP + P L+++GL+++TT E LR AF +FG+VV
Sbjct: 24 FSTTSPNSFMPPPITAMGNGEGTPGREQAPPSTNLFVSGLNKRTTMEKLREAFSQFGQVV 83
Query: 328 DARIVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PPK 498
DAR+V D R +G +K +GFV YAT EEA+KGR+GMD K+LDGWVIF EY +P P +
Sbjct: 84 DARVVTD--RVSGYSKGFGFVRYATLEEAEKGREGMDGKFLDGWVIFAEYARPRPER 138
>EOY12680.1 RNA-binding family protein [Theobroma cacao]
Length = 156
Score = 107 bits (267), Expect = 3e-25
Identities = 57/117 (48%), Positives = 76/117 (64%), Gaps = 9/117 (7%)
Frame = +1
Query: 175 FLGTSPLANAPPPTQPLLPEHRCP---------KLYINGLSRKTTEETLRAAFEKFGKVV 327
F TSP + PPP + P L+++GL+++TT E LR AF +FG+VV
Sbjct: 24 FSTTSPNSFMPPPITAMGNGEGTPGREQAPPSTNLFVSGLNKRTTMEKLREAFSQFGQVV 83
Query: 328 DARIVADKNRKTGETKYYGFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PPK 498
DAR+V D R +G +K +GFV YAT EEA+KGR+GMD K+LDGWVIF EY +P P +
Sbjct: 84 DARVVTD--RVSGYSKGFGFVRYATLEEAEKGREGMDGKFLDGWVIFAEYARPRPER 138
>XP_010267842.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Nelumbo nucifera]
Length = 140
Score = 106 bits (265), Expect = 3e-25
Identities = 53/99 (53%), Positives = 70/99 (70%)
Frame = +1
Query: 202 APPPTQPLLPEHRCPKLYINGLSRKTTEETLRAAFEKFGKVVDARIVADKNRKTGETKYY 381
APPP +P P L+++GLS++TT E LR AF KFG+VV A++V D R +G +K +
Sbjct: 35 APPPAEP------SPNLFVSGLSKRTTSEGLREAFSKFGEVVHAKVVTD--RVSGYSKGF 86
Query: 382 GFVTYATQEEADKGRKGMDSKYLDGWVIFPEYVKP*PPK 498
GFV YAT E+A +G KGMD K+LDGWVIF EY +P P+
Sbjct: 87 GFVRYATVEQAAEGIKGMDGKFLDGWVIFAEYARPRTPR 125