BLASTX nr result

ID: Ephedra29_contig00006090 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00006090
         (764 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABK22291.1 unknown [Picea sitchensis]                                  55   6e-07
XP_002315204.1 eukaryotic translation initiation factor 3G famil...    53   4e-06
XP_006488394.1 PREDICTED: eukaryotic translation initiation fact...    53   4e-06
XP_006424916.1 hypothetical protein CICLE_v10028957mg [Citrus cl...    53   4e-06
GAV70317.1 RRM_1 domain-containing protein/eIF3g domain-containi...    52   1e-05

>ABK22291.1 unknown [Picea sitchensis]
          Length = 306

 Score = 55.1 bits (131), Expect(2) = 6e-07
 Identities = 24/43 (55%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
 Frame = -1

Query: 728 DGEGGHQIR--ELDDEDNDDLGFLLPPPQVLGPDASGVKKVID 606
           D +   ++R  EL++EDN+DL FLLPPP+V+GPD +GVKK+I+
Sbjct: 6   DSKASAKVRWGELEEEDNEDLDFLLPPPKVVGPDENGVKKIIE 48



 Score = 26.9 bits (58), Expect(2) = 6e-07
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 544 KRALEHRHWKKFG 506
           KRALE R W+KFG
Sbjct: 76  KRALERREWRKFG 88


>XP_002315204.1 eukaryotic translation initiation factor 3G family protein [Populus
           trichocarpa] EEF01375.1 eukaryotic translation
           initiation factor 3G family protein [Populus
           trichocarpa]
          Length = 294

 Score = 52.8 bits (125), Expect(2) = 4e-06
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = -1

Query: 701 ELDDEDNDDLGFLLPPPQVLGPDASGVKKVID 606
           ELD+ED +DL FLLPP QV+GPD +G+KKVI+
Sbjct: 17  ELDEEDGEDLDFLLPPKQVIGPDENGIKKVIE 48



 Score = 26.6 bits (57), Expect(2) = 4e-06
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 544 KRALEHRHWKKFG 506
           KRALE R+W KFG
Sbjct: 76  KRALERRNWSKFG 88


>XP_006488394.1 PREDICTED: eukaryotic translation initiation factor 3 subunit G
           [Citrus sinensis] KDO66649.1 hypothetical protein
           CISIN_1g022742mg [Citrus sinensis]
          Length = 293

 Score = 53.1 bits (126), Expect(2) = 4e-06
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = -1

Query: 701 ELDDEDNDDLGFLLPPPQVLGPDASGVKKVID 606
           ELD+ED +DL FLLPP QV+GPD +GVKKVI+
Sbjct: 17  ELDEEDGEDLDFLLPPKQVIGPDENGVKKVIE 48



 Score = 26.2 bits (56), Expect(2) = 4e-06
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 544 KRALEHRHWKKFG 506
           KRALE R+W KFG
Sbjct: 76  KRALERRNWAKFG 88


>XP_006424916.1 hypothetical protein CICLE_v10028957mg [Citrus clementina]
           ESR38156.1 hypothetical protein CICLE_v10028957mg
           [Citrus clementina]
          Length = 293

 Score = 53.1 bits (126), Expect(2) = 4e-06
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = -1

Query: 701 ELDDEDNDDLGFLLPPPQVLGPDASGVKKVID 606
           ELD+ED +DL FLLPP QV+GPD +GVKKVI+
Sbjct: 17  ELDEEDGEDLDFLLPPKQVIGPDENGVKKVIE 48



 Score = 26.2 bits (56), Expect(2) = 4e-06
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 544 KRALEHRHWKKFG 506
           KRALE R+W KFG
Sbjct: 76  KRALERRNWAKFG 88


>GAV70317.1 RRM_1 domain-containing protein/eIF3g domain-containing protein
           [Cephalotus follicularis]
          Length = 296

 Score = 51.6 bits (122), Expect(2) = 1e-05
 Identities = 22/32 (68%), Positives = 27/32 (84%)
 Frame = -1

Query: 701 ELDDEDNDDLGFLLPPPQVLGPDASGVKKVID 606
           ELD+ED +DL FLLPP QV GPD +G+KKVI+
Sbjct: 19  ELDEEDGEDLDFLLPPKQVTGPDENGIKKVIE 50



 Score = 26.2 bits (56), Expect(2) = 1e-05
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 544 KRALEHRHWKKFG 506
           KRALE R+W KFG
Sbjct: 78  KRALERRNWPKFG 90


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