BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00006074
         (1696 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011626804.1 PREDICTED: probable RNA-dependent RNA polymerase ...   427   e-135
ERN15132.1 hypothetical protein AMTR_s00056p00110240 [Amborella ...   427   e-135
XP_015868097.1 PREDICTED: probable RNA-dependent RNA polymerase ...   420   e-135
XP_019704822.1 PREDICTED: probable RNA-dependent RNA polymerase ...   407   e-127
JAT41499.1 putative RNA-dependent RNA polymerase 3 [Anthurium am...   405   e-127
CDP03267.1 unnamed protein product [Coffea canephora]                 404   e-126
XP_008791530.1 PREDICTED: probable RNA-dependent RNA polymerase ...   403   e-126
XP_008791522.1 PREDICTED: probable RNA-dependent RNA polymerase ...   403   e-126
XP_009352548.1 PREDICTED: probable RNA-dependent RNA polymerase ...   403   e-125
XP_019052370.1 PREDICTED: probable RNA-dependent RNA polymerase ...   400   e-125
XP_010322170.1 PREDICTED: probable RNA-dependent RNA polymerase ...   397   e-124
XP_011078257.1 PREDICTED: probable RNA-dependent RNA polymerase ...   397   e-123
XP_016454734.1 PREDICTED: probable RNA-dependent RNA polymerase ...   391   e-123
XP_011093632.1 PREDICTED: probable RNA-dependent RNA polymerase ...   396   e-123
XP_012845534.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-depe...   396   e-123
KZV15097.1 putative RNA-dependent RNA polymerase 3 [Dorcoceras h...   385   e-122
XP_015077971.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-depe...   394   e-122
CDP03268.1 unnamed protein product [Coffea canephora]                 390   e-122
XP_019078598.1 PREDICTED: probable RNA-dependent RNA polymerase ...   389   e-122
XP_017241744.1 PREDICTED: probable RNA-dependent RNA polymerase ...   394   e-122

>XP_011626804.1 PREDICTED: probable RNA-dependent RNA polymerase 5 [Amborella
            trichopoda]
          Length = 974

 Score =  427 bits (1097), Expect = e-135
 Identities = 238/538 (44%), Positives = 326/538 (60%), Gaps = 5/538 (0%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKHE-ANLSQTLV 179
            A+KGT+L+NK LP NTI +R SMVKVERD ++   P+ +S E+     +   A LS+ L+
Sbjct: 448  AVKGTVLVNKLLPPNTIQVRPSMVKVERDTDFSRLPSFNSFEMVGTSNRPRGAALSRYLI 507

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
             LL++GGVP S F  L   AL+D+      ++ A     + Q + D+  V RM+  G+P+
Sbjct: 508  TLLSHGGVPKSCFMFLIQAALDDVQNVRYSKKLALTAAVKYQEISDNLLVARMIFCGLPL 567

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
             EP+LQ RL   +  + K +++GKV L NSYY+MGTADP+G+LK NEVCIILDHGQ+SG 
Sbjct: 568  EEPYLQHRLSILMKEERKGLKEGKVLLPNSYYLMGTADPTGKLKGNEVCIILDHGQISGK 627

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYR+PG HFGD+H++ ATY++++ EIVG+AKF IFFSTQG RS ADEIA GDFDGD+Y
Sbjct: 628  VLVYRHPGLHFGDIHVFTATYIEDLVEIVGNAKFAIFFSTQGPRSAADEIANGDFDGDMY 687

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            W+  N  +L  +K  P W               ++S ++LE  LFD FL  RF PS    
Sbjct: 688  WISTNPELLHYFKAGPPWERSSSEKPPPQRKPIEYSPDELETELFDLFLESRFHPSIAKC 747

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
            +AA+SW+ YMDRLLT     ++E   L +KML L D+YY+A+DA ++G KVE+P +L+ +
Sbjct: 748  AAADSWLVYMDRLLTLGDECAEEKGCLHQKMLKLADLYYEAVDAPKSGKKVEVPKDLKPE 807

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEETN 1259
            + PH M           Y STS+LG++YDL   +  D   E      DI +LP FLEE  
Sbjct: 808  RYPHFMERTYQ------YTSTSILGQIYDLVASAQMDVPCE------DIELLPCFLEEVE 855

Query: 1260 KKTL--WMKHYEIYRSEMSNAMDSPDSSRVN--DXXXXXXXXXXXADCLDESSENRSDIY 1427
               +  W   Y  YR EM+ A+ S D  + N  +           A   +E +  R +I+
Sbjct: 856  PSGMEKWKGLYAQYRDEMNKALSSTDQKKSNADEVIQNYKKILYGAQEYEERTRPREEIF 915

Query: 1428 DEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKHHKNPILISASKLYSIL 1601
             EA  IY + Y YA+   D+ KC FAW VAG ALCE++  K  KN I   +S L  +L
Sbjct: 916  REACEIYAISYFYAKEKSDIAKCGFAWKVAGCALCELHALKQKKNSITCLSSVLQELL 973


>ERN15132.1 hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
          Length = 988

 Score =  427 bits (1097), Expect = e-135
 Identities = 238/538 (44%), Positives = 326/538 (60%), Gaps = 5/538 (0%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKHE-ANLSQTLV 179
            A+KGT+L+NK LP NTI +R SMVKVERD ++   P+ +S E+     +   A LS+ L+
Sbjct: 462  AVKGTVLVNKLLPPNTIQVRPSMVKVERDTDFSRLPSFNSFEMVGTSNRPRGAALSRYLI 521

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
             LL++GGVP S F  L   AL+D+      ++ A     + Q + D+  V RM+  G+P+
Sbjct: 522  TLLSHGGVPKSCFMFLIQAALDDVQNVRYSKKLALTAAVKYQEISDNLLVARMIFCGLPL 581

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
             EP+LQ RL   +  + K +++GKV L NSYY+MGTADP+G+LK NEVCIILDHGQ+SG 
Sbjct: 582  EEPYLQHRLSILMKEERKGLKEGKVLLPNSYYLMGTADPTGKLKGNEVCIILDHGQISGK 641

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYR+PG HFGD+H++ ATY++++ EIVG+AKF IFFSTQG RS ADEIA GDFDGD+Y
Sbjct: 642  VLVYRHPGLHFGDIHVFTATYIEDLVEIVGNAKFAIFFSTQGPRSAADEIANGDFDGDMY 701

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            W+  N  +L  +K  P W               ++S ++LE  LFD FL  RF PS    
Sbjct: 702  WISTNPELLHYFKAGPPWERSSSEKPPPQRKPIEYSPDELETELFDLFLESRFHPSIAKC 761

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
            +AA+SW+ YMDRLLT     ++E   L +KML L D+YY+A+DA ++G KVE+P +L+ +
Sbjct: 762  AAADSWLVYMDRLLTLGDECAEEKGCLHQKMLKLADLYYEAVDAPKSGKKVEVPKDLKPE 821

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEETN 1259
            + PH M           Y STS+LG++YDL   +  D   E      DI +LP FLEE  
Sbjct: 822  RYPHFMERTYQ------YTSTSILGQIYDLVASAQMDVPCE------DIELLPCFLEEVE 869

Query: 1260 KKTL--WMKHYEIYRSEMSNAMDSPDSSRVN--DXXXXXXXXXXXADCLDESSENRSDIY 1427
               +  W   Y  YR EM+ A+ S D  + N  +           A   +E +  R +I+
Sbjct: 870  PSGMEKWKGLYAQYRDEMNKALSSTDQKKSNADEVIQNYKKILYGAQEYEERTRPREEIF 929

Query: 1428 DEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKHHKNPILISASKLYSIL 1601
             EA  IY + Y YA+   D+ KC FAW VAG ALCE++  K  KN I   +S L  +L
Sbjct: 930  REACEIYAISYFYAKEKSDIAKCGFAWKVAGCALCELHALKQKKNSITCLSSVLQELL 987


>XP_015868097.1 PREDICTED: probable RNA-dependent RNA polymerase 5, partial [Ziziphus
            jujuba]
          Length = 794

 Score =  420 bits (1079), Expect = e-135
 Identities = 233/536 (43%), Positives = 324/536 (60%), Gaps = 7/536 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKHEAN-LSQTLV 179
            A+KGT LLNKKLP  T+ IR SMVKVERDEN   +   +S+EI       +   LS+ L+
Sbjct: 265  AVKGTFLLNKKLPPRTMQIRDSMVKVERDENLSNNQTANSMEIVGTSNPPKKTYLSRNLI 324

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL++GGVP+ +F  +  +AL+D      ++  A ++   N  +DD++ V RM+ +GIP+
Sbjct: 325  ALLSHGGVPNEYFMNILQKALQDTHGAFSNKRAALRVSFNNGEIDDNFAVARMILSGIPL 384

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
             E +LQ RL   +  + K++R+G++++   YY+MGT DP+G+L+ NEVCI+LD+GQVSG 
Sbjct: 385  EESWLQYRLSILMREEKKSLREGRLYVPECYYLMGTVDPTGKLESNEVCIVLDNGQVSGK 444

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGD+H+ KATYV+E+E  VG++K+ IFFS +G RS ADEIAGGDFDGD+Y
Sbjct: 445  VLVYRNPGLHFGDIHVLKATYVEELESFVGNSKYAIFFSRKGPRSIADEIAGGDFDGDMY 504

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            W+  N  +L+ +K    W                FS E+L+  LF  FL  RF PS    
Sbjct: 505  WISRNPQLLEYFKPSEPWNPSSSMPKVANKKPNLFSDEELDDELFKLFLKARFQPSFAMS 564

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
             AA+SW+A MDR L      ++E +++ +KML L+DIYY ALDA + G KV +P+EL+ +
Sbjct: 565  EAADSWLALMDRFLMLDNDNAEEKNVVKQKMLQLIDIYYDALDAPKKGGKVVVPDELKVR 624

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEETN 1259
            + PH M +   C    YY STS+LG +YD       +D       T +I  LP F  E  
Sbjct: 625  QFPHYM-EKKKC----YYKSTSILGLIYDAVRSYQEED-----HSTEEISKLPCFDVEVP 674

Query: 1260 KK--TLWMKHYEIYRSEMSNAMDSPDSSRVND----XXXXXXXXXXXADCLDESSENRSD 1421
            +   T W KHY  YR+EMSNA+   D  R N+               A+  ++S  N  D
Sbjct: 675  EACYTKWNKHYVRYRAEMSNALQDEDKDRKNEAADWVNNKYKEILYEAEEFEQSERNIED 734

Query: 1422 IYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKHHKNPILISASKL 1589
            I +EA AIY + YDYA+N   V KC FAW VAG AL ++Y  K ++   +   S L
Sbjct: 735  ICNEALAIYNLAYDYAKNNACVGKCGFAWKVAGPALLKLYAMKQNEKAFMCLPSVL 790


>XP_019704822.1 PREDICTED: probable RNA-dependent RNA polymerase 5 [Elaeis
            guineensis]
          Length = 1005

 Score =  407 bits (1045), Expect = e-127
 Identities = 230/542 (42%), Positives = 335/542 (61%), Gaps = 9/542 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKHEAN-LSQTLV 179
            A+KGTLL++K+LP NTI+IR SM+KV+ D +     + +SLE+     + +   LS+ L+
Sbjct: 470  AVKGTLLIDKRLPPNTILIRPSMIKVKVDPSISYIQSCNSLEVVGTSNRPKRTFLSRNLI 529

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL++GGVP  +F  L   AL+D      +++ A ++  +  G  DD+ V RM+  GIP+
Sbjct: 530  ALLHHGGVPKEYFLELLMNALDDAQNIQYNKQAALRVALK-YGDMDDFLVARMILCGIPL 588

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            NEP+LQ RL   +  ++K +++GK+ +   Y++MGT DP+G LKPNEVCIIL++G VSGD
Sbjct: 589  NEPYLQSRLLVLMREEMKVLKEGKLPVSECYHLMGTVDPTGTLKPNEVCIILENGHVSGD 648

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYR+PG HFGDVH+  ATYVK +++IVG++K+ I F  +G RS ADE+AGGDFDGD+Y
Sbjct: 649  VLVYRHPGLHFGDVHILTATYVKGLDKIVGNSKYAILFPAKGPRSLADEMAGGDFDGDMY 708

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  N  +LK ++    W              T FS+ +LE  LFD+FL  RF PS   G
Sbjct: 709  WVSRNPQLLKYFRASKPWVRTAPRIKVTQTKPTQFSNTELESELFDRFLISRFKPSYTIG 768

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
            +AA+ W+ YMDRLLT     +++  LL EKML LVDIYY ALDAS+ G K+E+P+EL+  
Sbjct: 769  TAADCWLMYMDRLLTLGDECAEQKQLLREKMLELVDIYYDALDASKHGLKIEVPSELKPD 828

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDF-LEET 1256
            + P+ M +    + D  Y S S+ G +Y+    S ++D     + + +I  LP F LE+T
Sbjct: 829  QFPNFM-EKKYLDKDKVYESKSIFGLIYEKVKSSQTED-----RPSNEIWQLPCFSLEKT 882

Query: 1257 NKKTLWMKHYEIYRSEMSNAM----DSPDSS--RVNDXXXXXXXXXXXADCLDESSENRS 1418
            +    W +HY  Y +EM   M    DS +S     N            A   +ES++   
Sbjct: 883  SCLESWKQHYNEYLAEMRQVMSMEHDSKESKDWMANKVIQKYKQMLYGASEFEESNKELD 942

Query: 1419 DIYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKHHK-NPILISASKLYS 1595
            DI++EA AIY V Y+YA+++G   +C FAW VAG ALC ++ +K  + + IL  +S L  
Sbjct: 943  DIFNEALAIYHVTYEYAKSVGTAGRCCFAWNVAGRALCMLHAKKQSQFSSILCLSSVLRE 1002

Query: 1596 IL 1601
            ++
Sbjct: 1003 VI 1004


>JAT41499.1 putative RNA-dependent RNA polymerase 3 [Anthurium amnicola]
          Length = 995

 Score =  405 bits (1041), Expect = e-127
 Identities = 242/541 (44%), Positives = 314/541 (58%), Gaps = 8/541 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQ-KHEANLSQTLV 179
            AIKGTLL+N+KL   TI+IR SMVKVE D+      + +SLEI        +A LS+ L+
Sbjct: 468  AIKGTLLVNRKLRPQTILIRPSMVKVEEDQCISSIHSANSLEIVGTSNLPRKATLSKHLI 527

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
              L+YGGVP  FF  L   AL +    C D   A K+  ++  +DD Y  +RM+  GIP+
Sbjct: 528  MHLHYGGVPRKFFLELLSNALVEAERACLDRRAALKVALRHADMDD-YLAVRMILCGIPM 586

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            +EPFLQ RL   +  + K +++GK+ + + YY+MGTADP+G LK +EVCIILD GQVSGD
Sbjct: 587  DEPFLQFRLSVLMAEEKKGLKEGKLPISDCYYLMGTADPTGTLKSHEVCIILDKGQVSGD 646

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGDVH+  ATYVKE+E IVG+AKF IFFSTQG RS A EIA  DFDGD Y
Sbjct: 647  VLVYRNPGLHFGDVHVLTATYVKELENIVGNAKFAIFFSTQGPRSVAYEIANSDFDGDKY 706

Query: 720  WVCINKTVLKDYKLQPSW-XXXXXXXXXXXXXXTDFSS-EDLEQCLFDQFLTCRFSPSNI 893
            WV +NK +L  ++    W                D+S+ E LE  LF  FL  RF PS  
Sbjct: 707  WVSMNKQLLCHFRPSTPWTATSFNKTKCPQMKPADYSTPEQLESKLFQLFLETRFIPSYS 766

Query: 894  TGSAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELR 1073
              ++A+SW+++MDRLLT      KE   L + ML LVDIYY ALDA + G KVE+P +LR
Sbjct: 767  MSTSADSWLSFMDRLLTLGNDCEKEKQTLRDNMLKLVDIYYDALDAPKQGLKVEVPEDLR 826

Query: 1074 AQKMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEE 1253
            A+K PH +           Y STS+LGE++D     NS   D K     DI  L  F +E
Sbjct: 827  AEKYPHFLEKKYS------YRSTSVLGEIFD---TVNSSQTDSKK----DIWKLSCFEDE 873

Query: 1254 T-NKKTLWMKHYEIYRSEMSNAMDSPDS----SRVNDXXXXXXXXXXXADCLDESSENRS 1418
              +   +W   Y  YR EMS A+         +  N+           A   ++ +  R 
Sbjct: 874  VPHSMEIWWGRYLQYRKEMSKALSIESKEIKVAAANEVIQKYKRLLYDAAEFEDCTRERE 933

Query: 1419 DIYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKHHKNPILISASKLYSI 1598
            D+ DEA +IY V YDYA    +V KC FAW VAG+ALC +Y ++  K  I  S   L  +
Sbjct: 934  DVLDEALSIYHVSYDYAMQKNEVGKCSFAWNVAGQALCSLYSKRQGKGSIPCSVDVLREV 993

Query: 1599 L 1601
            +
Sbjct: 994  M 994


>CDP03267.1 unnamed protein product [Coffea canephora]
          Length = 1019

 Score =  404 bits (1039), Expect = e-126
 Identities = 232/535 (43%), Positives = 315/535 (58%), Gaps = 6/535 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQK-HEANLSQTLV 179
            A+KGTLL+NKKL   TI IR SM+KV++D         DSLEI  +  +    +LS+ L+
Sbjct: 495  AVKGTLLVNKKLKAGTIQIRPSMIKVQKDREGPIGQTFDSLEIVAVSHRPRRCHLSKYLI 554

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL+YGGVP +FF  L    LE+ +    D+  A+K+    +G  D    LR+L AGIP+
Sbjct: 555  ALLSYGGVPRTFFVDLMTSVLEETNAVFTDKRAAFKVALHQEGFYDAGGALRLLLAGIPL 614

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            NEP LQ+RL E   N+   +++GK+ +  S+Y+MGTADP+G LK NEVC++LD+GQVSG 
Sbjct: 615  NEPHLQKRLSELANNERTLLKEGKIPISESFYLMGTADPTGLLKENEVCVVLDNGQVSGK 674

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VL+YRNPG HFGDVH+ +A YV  +E+I+G+AK+GIFFST+G+RS A EIA GDFDGD+Y
Sbjct: 675  VLLYRNPGLHFGDVHVLEAVYVPALEDIIGNAKYGIFFSTKGRRSVASEIANGDFDGDMY 734

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  N  +LK +   P W               ++S+E LE  LF  FL     PS    
Sbjct: 735  WVSRNPQLLKYFSASPPWTRVYPSLRAERKNPNEYSAEQLEHELFRHFLK---KPSYNMA 791

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
             AA+SW+A+MDRLL      +KE D L E ML L+DIYY ALDA + G+KV +P EL+A+
Sbjct: 792  VAADSWLAFMDRLLILGDDNAKEKDALKENMLKLIDIYYDALDAPKRGTKVIVPEELKAE 851

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEET- 1256
            + PH M  D        Y STS+LG++YD        +  +  ++   I  LP F  E  
Sbjct: 852  RFPHYMGKDGS------YRSTSVLGDIYD------RAEAFQSEQRCIAIEKLPCFDVEVP 899

Query: 1257 -NKKTLWMKHYEIYRSEMSNAMDSPDSSR---VNDXXXXXXXXXXXADCLDESSENRSDI 1424
             N  + W   Y  YR EM+ A+   D SR    +D           A   +ES ++  +I
Sbjct: 900  QNYLSSWRGRYNEYRKEMNVALQKDDESRNDAADDVIKKYKRLLYEAAEFEESKKDVQEI 959

Query: 1425 YDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKHHKNPILISASKL 1589
            + EA A+YQV YDYA +  D  KC FAW  AG AL   +    ++  + +S S L
Sbjct: 960  HKEALALYQVTYDYAISTKDAGKCGFAWKAAGSALLSYFATGRNERLVPVSPSAL 1014


>XP_008791530.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Phoenix dactylifera]
          Length = 981

 Score =  403 bits (1035), Expect = e-126
 Identities = 229/543 (42%), Positives = 330/543 (60%), Gaps = 10/543 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKHEAN-LSQTLV 179
            A+KGTLL++K+LP NTI+IR SM+KVE D +     + +SLE+     + +   LS+ ++
Sbjct: 445  AVKGTLLIDKRLPPNTILIRPSMLKVEADPSISYIQSCNSLEVVGSSNRPKRTFLSRNII 504

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL+YGGVP  +F  L   AL+D      +++ A ++  +  G  DD+ V RM+  GIP+
Sbjct: 505  ALLHYGGVPKEYFLELLMNALDDAQNVQYNKQAALRVALK-YGDMDDFLVARMILCGIPL 563

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
             EP+LQ RL      ++K +++GK+ +   YY+MG+ DP+G LKPNEVCIIL++G VSGD
Sbjct: 564  GEPYLQSRLLVLRREEMKALKEGKLPVSECYYLMGSVDPTGTLKPNEVCIILENGHVSGD 623

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYR PG HFGD+H+  ATYVK++++IVG++K+ I FST+G RS ADE+AGGDFDGD+Y
Sbjct: 624  VLVYRQPGLHFGDMHILTATYVKDLDKIVGNSKYAILFSTKGPRSLADEMAGGDFDGDMY 683

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  N  +LK +K    W              T FS+ +LE+ LF+QFL  RF PS   G
Sbjct: 684  WVSRNPQLLKYFKASKPWVRTAPRIKVTQLKPTQFSNTELERELFEQFLINRFKPSYTIG 743

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
            +A++ W+ YMDRLLT     +K+  LL EKML LVDIYY ALDAS++G K+E+P+EL+  
Sbjct: 744  TASDCWLMYMDRLLTLGDECAKQKQLLREKMLELVDIYYDALDASKSGLKIEVPSELKPD 803

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEETN 1259
            + P+ M +    + D  Y S S+ G +Y+    S + D+      + +I  LP F  E  
Sbjct: 804  QFPNFM-EKKYLDKDKEYESKSIFGLIYEKVKLSQTKDL-----SSNEIWQLPCFNLEIP 857

Query: 1260 KKTL--WMKHYEIYRSEMSNAMDSPDSSR------VNDXXXXXXXXXXXADCLDESSENR 1415
               L  W +HY  Y +EMS  M     S+       N            A   +ES+   
Sbjct: 858  PSCLKSWKEHYTEYLAEMSQVMSMEHESKESKDWMANKVIQKYKLMLYGASEFEESNREL 917

Query: 1416 SDIYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKHHK-NPILISASKLY 1592
             DI++EA AIY V Y+YA+++    +C FAW VAG ALC ++ +K  + + IL  +S L 
Sbjct: 918  DDIFNEALAIYHVTYEYAKSVRIAGRCCFAWNVAGRALCMLHAKKQSQYSSILCLSSVLR 977

Query: 1593 SIL 1601
             ++
Sbjct: 978  EVI 980


>XP_008791522.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Phoenix dactylifera]
          Length = 1006

 Score =  403 bits (1035), Expect = e-126
 Identities = 229/543 (42%), Positives = 330/543 (60%), Gaps = 10/543 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKHEAN-LSQTLV 179
            A+KGTLL++K+LP NTI+IR SM+KVE D +     + +SLE+     + +   LS+ ++
Sbjct: 470  AVKGTLLIDKRLPPNTILIRPSMLKVEADPSISYIQSCNSLEVVGSSNRPKRTFLSRNII 529

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL+YGGVP  +F  L   AL+D      +++ A ++  +  G  DD+ V RM+  GIP+
Sbjct: 530  ALLHYGGVPKEYFLELLMNALDDAQNVQYNKQAALRVALK-YGDMDDFLVARMILCGIPL 588

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
             EP+LQ RL      ++K +++GK+ +   YY+MG+ DP+G LKPNEVCIIL++G VSGD
Sbjct: 589  GEPYLQSRLLVLRREEMKALKEGKLPVSECYYLMGSVDPTGTLKPNEVCIILENGHVSGD 648

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYR PG HFGD+H+  ATYVK++++IVG++K+ I FST+G RS ADE+AGGDFDGD+Y
Sbjct: 649  VLVYRQPGLHFGDMHILTATYVKDLDKIVGNSKYAILFSTKGPRSLADEMAGGDFDGDMY 708

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  N  +LK +K    W              T FS+ +LE+ LF+QFL  RF PS   G
Sbjct: 709  WVSRNPQLLKYFKASKPWVRTAPRIKVTQLKPTQFSNTELERELFEQFLINRFKPSYTIG 768

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
            +A++ W+ YMDRLLT     +K+  LL EKML LVDIYY ALDAS++G K+E+P+EL+  
Sbjct: 769  TASDCWLMYMDRLLTLGDECAKQKQLLREKMLELVDIYYDALDASKSGLKIEVPSELKPD 828

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEETN 1259
            + P+ M +    + D  Y S S+ G +Y+    S + D+      + +I  LP F  E  
Sbjct: 829  QFPNFM-EKKYLDKDKEYESKSIFGLIYEKVKLSQTKDL-----SSNEIWQLPCFNLEIP 882

Query: 1260 KKTL--WMKHYEIYRSEMSNAMDSPDSSR------VNDXXXXXXXXXXXADCLDESSENR 1415
               L  W +HY  Y +EMS  M     S+       N            A   +ES+   
Sbjct: 883  PSCLKSWKEHYTEYLAEMSQVMSMEHESKESKDWMANKVIQKYKLMLYGASEFEESNREL 942

Query: 1416 SDIYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKHHK-NPILISASKLY 1592
             DI++EA AIY V Y+YA+++    +C FAW VAG ALC ++ +K  + + IL  +S L 
Sbjct: 943  DDIFNEALAIYHVTYEYAKSVRIAGRCCFAWNVAGRALCMLHAKKQSQYSSILCLSSVLR 1002

Query: 1593 SIL 1601
             ++
Sbjct: 1003 EVI 1005


>XP_009352548.1 PREDICTED: probable RNA-dependent RNA polymerase 3 [Pyrus x
            bretschneideri]
          Length = 1088

 Score =  403 bits (1036), Expect = e-125
 Identities = 236/541 (43%), Positives = 319/541 (58%), Gaps = 8/541 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIG-QKHEANLSQTLV 179
            A+KGT L+NK LP  T+ IR SMVKV+ D     +  V++LEI        ++ LS+ L+
Sbjct: 561  AVKGTFLVNKMLPPKTVQIRPSMVKVQIDPELSDNETVNALEIVGTSIPPRKSYLSRNLI 620

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL +GGVP  +F  +  RALED      +   A K+   N  +DD+    RM+  GIP+
Sbjct: 621  ALLFHGGVPKEYFMEILERALEDADSVFCNAHTALKVAVNNGEIDDNSNTARMILCGIPL 680

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            +E +LQ RL   +  ++K +R+GK+++ + YY+MGTADP+G L+ +EVCIILD GQVSG 
Sbjct: 681  DESYLQYRLSILIKEEMKGLRRGKLYVPDCYYLMGTADPTGILEKDEVCIILDSGQVSGK 740

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGD+H+ KATYVKE+E +VG+AK+ IFFS +G RS ADEI+GGDFDGDLY
Sbjct: 741  VLVYRNPGLHFGDIHVLKATYVKELEYVVGNAKYAIFFSRKGPRSVADEISGGDFDGDLY 800

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  N  +L  +K    W                 S EDLE+ L + FLT RF PS    
Sbjct: 801  WVSKNPQLLGYFKPSEPWVPASSAPKAASVKPAKLSKEDLEEQLINLFLTTRFKPSYAMS 860

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
             AA+SW+A MDR LT     S + +L+   +L LVDIYY ALDA + G KVE+P +L+  
Sbjct: 861  EAADSWLAMMDRYLTR-GDSSIDENLVKANILRLVDIYYDALDAPKKGGKVEVPKDLKVS 919

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEETN 1259
            K PH M   +       Y STS+LG +YD   +   DD+      T ++  LP F  E  
Sbjct: 920  KFPHYMEKKNS------YPSTSILGSIYDTVNEYQPDDL-----STREVKKLPIFDVEVP 968

Query: 1260 KKTL--WMKHYEIYRSEMSNAMDSPDSSRVN----DXXXXXXXXXXXADCLDESSENRSD 1421
            ++ L  W + Y+ YR +M++A+   D    N    +            D  D+S+    +
Sbjct: 969  EECLIKWREQYKQYRCDMTSALRDGDQEGKNQAAGELITKYREILYGGDDFDKSTRPMGE 1028

Query: 1422 IYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKH-HKNPILISASKLYSI 1598
            I+DEA AIY V YDYA++ G V KC FAW VAG AL +++F K     P L+S S L  I
Sbjct: 1029 IFDEAIAIYNVCYDYARSAG-VSKCGFAWKVAGSALFKLHFIKQGDACPFLVSPSVLKEI 1087

Query: 1599 L 1601
            L
Sbjct: 1088 L 1088


>XP_019052370.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nelumbo nucifera]
          Length = 988

 Score =  400 bits (1029), Expect = e-125
 Identities = 236/542 (43%), Positives = 316/542 (58%), Gaps = 9/542 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEI-CNIGQKHEANLSQTLV 179
            A+KGT L+NKKLP  TI IR SM+KVE D         +SLEI     Q  ++ LS+ L+
Sbjct: 462  AVKGTFLVNKKLPPKTIQIRRSMIKVEADPKLSYVRTANSLEIVATSNQPRKSYLSKYLI 521

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALLNYGGVP  +F  L   AL++      ++  A K+  +  G  DD+ V RM+  GIP+
Sbjct: 522  ALLNYGGVPTDYFMNLLMNALDEAQSIHSNKRAALKVALK-YGDMDDFLVSRMILCGIPL 580

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
             EP+LQ RL   +  + K ++ GK+ +   YY+MGTADP+G L  NE+C+ILD GQ+SG 
Sbjct: 581  EEPYLQTRLSVLMREERKGLKAGKIPMSECYYLMGTADPTGMLGMNEICVILDSGQISGK 640

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVY+NPG HFGD+H+  ATYVKE+E IVG+AK+ IFF  +G RS ADE+A  DFDGDLY
Sbjct: 641  VLVYKNPGLHFGDIHVLTATYVKELESIVGNAKYAIFFPIKGPRSLADEMANSDFDGDLY 700

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  N  +L  ++    W               DFS+E+LE  LF  FLT +F PS   G
Sbjct: 701  WVSRNPQLLDYFRPSKPWKQTYSKKAPCHRKPIDFSAEELENQLFHLFLTTKFEPSKALG 760

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
             AA+SW+A+MDRLLT     S E + L +KML LVD YY ALDA + G KVE+P  L+A+
Sbjct: 761  IAADSWLAFMDRLLTLGDECSSEKECLKKKMLQLVDTYYDALDAPKNGIKVEVPKCLQAE 820

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYD-----LKLDSNSDDIDEKAKKTGDIVMLPDF 1244
            K PH M   +       Y STS+LG +YD      K + +S ++ +     G++      
Sbjct: 821  KFPHFMERMNK------YNSTSVLGLIYDEVNSFQKANLSSTEVWKLFCFDGEVA----- 869

Query: 1245 LEETNKKTLWMKHYEIYRSEMSNAMD---SPDSSRVNDXXXXXXXXXXXADCLDESSENR 1415
             E   +K  W  HY  YR EM +AM+      ++  N+           A   ++SS  R
Sbjct: 870  -EACMEK--WQMHYNEYRDEMKSAMELDGEAKNASANEVIQKYKQLLYGAANFEQSSRTR 926

Query: 1416 SDIYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKHHKNPILISASKLYS 1595
             +I++++ AIY V YDYA+  G V KC FAW VAGEALC +Y  K     I+ S S L  
Sbjct: 927  QEIFEDSLAIYHVCYDYARTKG-VEKCSFAWKVAGEALCMLYTIKQDGGSIICSQSILRE 985

Query: 1596 IL 1601
            +L
Sbjct: 986  LL 987


>XP_010322170.1 PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum] XP_010322171.1 PREDICTED: probable
            RNA-dependent RNA polymerase 3 [Solanum lycopersicum]
          Length = 1014

 Score =  397 bits (1021), Expect = e-124
 Identities = 230/533 (43%), Positives = 317/533 (59%), Gaps = 8/533 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQK-HEANLSQTLV 179
            A+KGT L+N+K+    I IR SMVKVE D      P  DSLEI  I  + ++A LS+ L+
Sbjct: 486  AVKGTFLVNRKIGSRKIHIRPSMVKVEIDPTISSIPTFDSLEIVAISHRPNKAYLSKNLI 545

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            +LL+YGGV   +F  L   ALE+       +  A K+    + +DD+    RM+S+GIP+
Sbjct: 546  SLLSYGGVHKEYFMELLGSALEETKQVYLRKRAALKVAINYREMDDECLTARMISSGIPL 605

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            NEP L  RL      +   +R GK+ + +S+Y+MGTADP+G L+ NEVC+ILD+GQVSG 
Sbjct: 606  NEPHLHARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVILDNGQVSGR 665

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGDVH+ KA YV+E+ ++VGDAK+GIFFST+G RS A EIA GDFDGD+Y
Sbjct: 666  VLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKGPRSAATEIANGDFDGDMY 725

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV IN+ ++  Y     W              ++FS+++LE  LF QFL  +   +N++ 
Sbjct: 726  WVSINRKLVDSYTTSRPWIRMHSTPNAVSKKPSEFSADELEYELFRQFLEAKSKGANMS- 784

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
             AA+SW+A+MDRLLT       +   L  KML L+DIYY ALDA ++G KV +P+ L+A 
Sbjct: 785  LAADSWLAFMDRLLTLRDDNVDDMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHYLKAN 844

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEETN 1259
            K PH M   + C+    Y STS+LG++YD     + D   ++     +I  LP F  E  
Sbjct: 845  KFPHYMEKGNSCS----YHSTSILGQIYD-----HVDSYPDEDLCITEISKLPCFEVEIP 895

Query: 1260 KK--TLWMKHYEIYRSEMSNAMDSPDSSRV---NDXXXXXXXXXXXADCLDESSENRSDI 1424
            ++  TLW   YE Y+ +M+ AM+     R+   N+           A   +++     DI
Sbjct: 896  QRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGAVEFEQTVRKTEDI 955

Query: 1425 YDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIY--FEKHHKNPILIS 1577
            +DEA AIY V YD A+    + KC FAW VAG ALC I+  + K    PIL S
Sbjct: 956  FDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPILPS 1008


>XP_011078257.1 PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1036

 Score =  397 bits (1020), Expect = e-123
 Identities = 235/541 (43%), Positives = 323/541 (59%), Gaps = 8/541 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKHEAN-LSQTLV 179
            A+KGTLL+N+KL   TI IR SM+KVERD+         SLEI    ++   N LS+ L+
Sbjct: 505  AVKGTLLINRKLEPGTIQIRPSMIKVERDQKLPLGETFKSLEIVATSRRPGRNALSKYLI 564

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL+YGGVP  FF  L   ALE+      D   A ++     GL+      RM+S+GIP+
Sbjct: 565  ALLSYGGVPQEFFCNLLTNALEETRNVYSDTRAALRVASNYDGLEVGVVARRMISSGIPL 624

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            +EP+LQ  L    + +   +++GK+ +  S+Y+MGTADP+G LK +EVC+ILD+GQ+SG 
Sbjct: 625  SEPYLQHCLSSLESGEKIKLKQGKIPVSESFYLMGTADPTGVLKNHEVCVILDNGQISGK 684

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGDVH+ +A Y +E+EE+VG+AK+GIFFST+GKRS A E+A GDFDGD+Y
Sbjct: 685  VLVYRNPGMHFGDVHVMEAVYKEELEEVVGNAKYGIFFSTKGKRSAAYEMATGDFDGDMY 744

Query: 720  WVCINKTVLKDYKLQPSW-XXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNIT 896
            WV  N  +LK +K    W                +FS  +LE  LF  F   R  PS   
Sbjct: 745  WVSRNPELLKYFKASEPWKRFYSTPADSKIRNPREFSDMELEHELFQLFQEAR-EPSFSM 803

Query: 897  GSAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRA 1076
             +AA+SW+ +MDRLLT     + E   L +K++ L+DIYY ALDA ++G KV++PNELRA
Sbjct: 804  ATAADSWLTFMDRLLTLGDDCASEKLSLKKKIIQLIDIYYDALDAPKSGKKVKVPNELRA 863

Query: 1077 QKMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEET 1256
            +  PH M   ++ +    Y S+S+LG +YD      +D +    K+   +  L D + E 
Sbjct: 864  EMYPHHMERGAEFS----YNSSSILGRIYDKVQAFKNDAV--PGKEIWKLPFLDDPIPEL 917

Query: 1257 NKKTLWMKHYEIYRSEMSNAMDSPDSSR---VNDXXXXXXXXXXXADCLDESSENRSDIY 1427
              K  W   Y+ YR EM++AM S D S+     D           A C++ES++N  +IY
Sbjct: 918  YLK--WKARYKDYREEMTSAMKSSDESKDLAARDVIHKYKQLLYEAPCMEESAKNTEEIY 975

Query: 1428 DEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEK---HHKNPILISASKLYSI 1598
            +E+ AIY VVYDYA   G V +C FAW VAG ALC++   K     + PI I  S L  +
Sbjct: 976  EESVAIYHVVYDYAMRHG-VTRCSFAWKVAGSALCDLCAWKLAGPKEEPIAILPSVLREL 1034

Query: 1599 L 1601
            L
Sbjct: 1035 L 1035


>XP_016454734.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
            [Nicotiana tabacum]
          Length = 813

 Score =  391 bits (1004), Expect = e-123
 Identities = 228/534 (42%), Positives = 319/534 (59%), Gaps = 9/534 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQK-HEANLSQTLV 179
            A+KGT L+N+K+    I IR SMVKVE D      P  +SLE+  I  +  +  LS+ L+
Sbjct: 285  AVKGTFLINRKIGSRKIQIRPSMVKVETDPTISSLPTFNSLEVVAISNRPRKTYLSKHLI 344

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            +LL+YGGV   FF  +   ALE+       +  A K+    + +DDD    RM+S+G+P+
Sbjct: 345  SLLSYGGVGREFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMISSGVPL 404

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            NEP L  RL      +   +R GK+ L +S+Y+MGTADP+G L+ NEVC+ILD GQVSG 
Sbjct: 405  NEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDSGQVSGR 464

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGDVH+ KA YV+E+ +IVGDAK+GI FST+G RS A EIA GDFDGD+Y
Sbjct: 465  VLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGDFDGDMY 524

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV IN+ ++  Y+    W              T+FS+++LE  LF QFL  +   ++++ 
Sbjct: 525  WVSINRKLVDSYRASKPWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAKSKGASMS- 583

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
             AA+SW+A+MDRLL     ++     L  KML L+DIYY ALDA ++G KV +P++L+A 
Sbjct: 584  VAADSWLAFMDRLLMLRDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLKAN 643

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDD---IDEKAKKTGDIVMLPDFLE 1250
            + PH M   +  +    Y STS+LG++YD  +DS  D+   I E +K     V +PD   
Sbjct: 644  RFPHYMERGNPFS----YHSTSILGQIYDY-VDSYPDEDLCITEISKLPCFDVEIPD--- 695

Query: 1251 ETNKKTLWMKHYEIYRSEMSNAMDS---PDSSRVNDXXXXXXXXXXXADCLDESSENRSD 1421
                 TLW + YE Y+ +M+ AM+S     +S  N+           A   ++S     D
Sbjct: 696  --ECTTLWRERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQSVRKTED 753

Query: 1422 IYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIY--FEKHHKNPILIS 1577
            I++EA A+Y V YD A+    + KC FAW VAG ALC I+  ++K +  PIL S
Sbjct: 754  IFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYQKENAFPILPS 807


>XP_011093632.1 PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1013

 Score =  396 bits (1017), Expect = e-123
 Identities = 233/543 (42%), Positives = 323/543 (59%), Gaps = 10/543 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKHEAN-LSQTLV 179
            A+KGTLL+NKKL    I IR SM+KVERD         +SLEI  I  K     LS+TL+
Sbjct: 481  AVKGTLLVNKKLKLGEIQIRPSMIKVERDCTAPVQGNFNSLEIVAISHKPGRTFLSKTLI 540

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            +LLNYGGVP   F  L   ALED      +   A ++   + GLD  Y    M+S GIP+
Sbjct: 541  SLLNYGGVPQQVFLELLTNALEDTQKVYSNRHAALRVASNHDGLDFGYLAQLMISCGIPL 600

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            NEP+L   L     ++   +RKGKV +  S+Y+MGTADP+G L+ ++VC++LD+GQ+SG 
Sbjct: 601  NEPYLNHCLCNLKKDERAKLRKGKVPVGESFYLMGTADPTGVLEYDQVCVVLDNGQISGK 660

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGD+H+ +A YV+++E+ +GD+K+GIFFST+G RS   E+A GDFDGD+Y
Sbjct: 661  VLVYRNPGLHFGDIHVMEAIYVQQLEDYIGDSKYGIFFSTKGGRSAPYEMATGDFDGDMY 720

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  +  +LK++K    W               + SSE+LE+ LF  FL  R  PS    
Sbjct: 721  WVSRHHELLKNFKASEPWARVYSTKESNSKNPKELSSEELERELFRLFLQAR-KPSFEMS 779

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
            +AA+SW+A+MDRLLT     + E D L EKM+ L+DIYY ALDA ++G +V LP ELR +
Sbjct: 780  TAADSWLAFMDRLLTLGDDRTFEKDCLREKMIHLIDIYYDALDAPKSGKRVNLPKELRPE 839

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDF---LE 1250
              PH M    + +    Y S S+LG +YD+  +   + + +K     +I  LP F   + 
Sbjct: 840  MYPHHMERGPEYS----YHSMSILGRIYDMIEEFKDEVVPKK-----EIWKLPCFDIPIP 890

Query: 1251 ETNKKTLWMKHYEIYRSEMSNAMDSPDSSR---VNDXXXXXXXXXXXADCLDESSENRSD 1421
            ET  +  W  +YE YR EM+ A++S   S+    ND           A  ++ESS++ + 
Sbjct: 891  ETYIQK-WRINYENYRREMAKALNSNYESKKDAANDVIKKNKEFLYDAPDMEESSKDTTV 949

Query: 1422 IYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEK---HHKNPILISASKLY 1592
            IY EA AIY V YDYA+++ D+ KC FAW V G ALC +Y  K     + P+ I  S + 
Sbjct: 950  IYKEALAIYHVTYDYAKSMDDIGKCSFAWKVGGSALCNLYAWKTAGPKEKPLTILPSVIR 1009

Query: 1593 SIL 1601
             +L
Sbjct: 1010 EVL 1012


>XP_012845534.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            5 [Erythranthe guttata]
          Length = 1040

 Score =  396 bits (1017), Expect = e-123
 Identities = 230/519 (44%), Positives = 313/519 (60%), Gaps = 7/519 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKHEAN-LSQTLV 179
            A+KGTLL+N+KL   TI IR SM+KVERD N     A +SLEI NI  K   N LS+ L+
Sbjct: 509  AVKGTLLVNRKLEPGTIQIRPSMIKVERDHNIKVEEAFNSLEIVNISHKPGRNCLSKYLI 568

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL+YGGVP  FF  L    LED      +   A ++   + GLD  +   RM+ +G+P+
Sbjct: 569  ALLSYGGVPQEFFLNLVANTLEDARNVYTNRRAALRVASNHAGLDYGFLAQRMICSGVPL 628

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            +EP+LQ  L      +   ++ GK+ L+ S+Y+MGTADP+G L  +EVC+IL +GQ+SG 
Sbjct: 629  DEPYLQLCLSNLENGEKTKLKTGKIPLNESFYLMGTADPTGVLNNDEVCVILGNGQISGK 688

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGDVH+ +A YVKE+EE VG+AK+G+FFST+G  S A E+A GDFDGD+Y
Sbjct: 689  VLVYRNPGMHFGDVHVMEAVYVKELEEFVGNAKYGVFFSTKGATSAAYEMATGDFDGDMY 748

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  N  +LK +K    W               +FS  +LE  LF   L  R +PS    
Sbjct: 749  WVSRNPELLKYFKASKPWKRVLSAPDSKKKNPKEFSDXELENELFQLCLEAR-TPSFNMA 807

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
            +AA+SW+ +MDRLLT     + E   L +KM+ LVDIYY ALDA ++G KV++P ELRA+
Sbjct: 808  TAADSWLTFMDRLLTLGDDRTAEKKSLMKKMIRLVDIYYDALDAPKSGKKVKVPEELRAE 867

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDF---LE 1250
              PH M   S+ +    Y S+S+LG++YD ++D+  +D   +     +I  LP F   + 
Sbjct: 868  MYPHHMEKGSELS----YHSSSVLGQIYD-RVDALKNDFVPRK----EIWKLPCFDVPIP 918

Query: 1251 ETNKKTLWMKHYEIYRSEMSNAMDSPDSSR---VNDXXXXXXXXXXXADCLDESSENRSD 1421
            E   K +W   YE YR EM+ A+ S + SR    ++           A  ++ES+++   
Sbjct: 919  EIYVK-MWKSRYESYRREMTKALKSGNESRNDAADEVIKKYKQLLYEAGDMEESAKSSEV 977

Query: 1422 IYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEI 1538
            IYDEA AIY V YDYA   G V KC FAW +A  ALC +
Sbjct: 978  IYDEAIAIYHVTYDYAMEHG-VEKCNFAWRIAASALCNL 1015


>KZV15097.1 putative RNA-dependent RNA polymerase 3 [Dorcoceras hygrometricum]
          Length = 675

 Score =  385 bits (989), Expect = e-122
 Identities = 227/542 (41%), Positives = 318/542 (58%), Gaps = 9/542 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKH-EANLSQTLV 179
            A KGTLL+NKKL   TI IR SM+KVERD         +SLEI +I +K     LS+ L+
Sbjct: 145  AAKGTLLVNKKLEQGTIHIRPSMIKVERDCTLAEEDTFNSLEIVDISRKPGRTTLSKYLI 204

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL+YG VP  FF +L   ALED      + + A K+   N GL+  +   RM+S+GIP+
Sbjct: 205  ALLSYGNVPPDFFLSLLINALEDSRNVYINRKSAMKVATNNNGLEYGFLAQRMISSGIPL 264

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            NEP+LQ  L +   ++   ++ GK+ +  ++Y+MGTADP+G L  +EVC+IL HGQVSG 
Sbjct: 265  NEPYLQHCLWKMEKDEKSKLKAGKLPISETFYLMGTADPTGILNYDEVCVILHHGQVSGK 324

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGD+H+ KA Y+KE+E IVG+AK+GIFFST+GK S   E+A GDFDGD+Y
Sbjct: 325  VLVYRNPGLHFGDIHVMKAIYLKELEAIVGNAKYGIFFSTKGKSSAPYEMATGDFDGDMY 384

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  N  +LK Y+    W               +FS+ +LE  L   FL  R  PS I  
Sbjct: 385  WVSRNPELLKYYQASDPWRRSNAPQKSNNRKPQEFSAMELECELGRLFLEAR-KPSFIIA 443

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
            +AA+SW+++MDRLLT  +  + E D L  K++ L+DIYY ALDA ++G KV+ P+ L+A+
Sbjct: 444  TAADSWLSFMDRLLT--IQYASEKDRLRRKIIELIDIYYDALDAPKSGKKVDFPDYLKAE 501

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEETN 1259
            + PH M   +       Y S S+LG++Y+ +++ + D+    A  T +I  LP F  + +
Sbjct: 502  QFPHYMQRGAGFT----YESFSILGQIYN-RMEKSKDE----ASSTKEIWKLPCFDVQIS 552

Query: 1260 KK--TLWMKHYEIYRSEMSNAMDSPDSSR---VNDXXXXXXXXXXXADCLDESSENRSDI 1424
            ++   +W   Y  YR +M+ A+ S   ++     +           A   +ES ++   I
Sbjct: 553  EEYVNMWRTRYADYRKDMTKALKSGSETKDDAAEEVIRKYKQMLYDAPYFEESEKDMEQI 612

Query: 1425 YDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIY---FEKHHKNPILISASKLYS 1595
            Y+EA AIY V YDYA     V +C F W VAG AL   Y        + PI+I  S L  
Sbjct: 613  YEEAVAIYHVTYDYAIRSNQVERCGFCWKVAGSALFNFYAGEVSGSKERPIVILPSVLRD 672

Query: 1596 IL 1601
            IL
Sbjct: 673  IL 674


>XP_015077971.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            3 [Solanum pennellii]
          Length = 1018

 Score =  394 bits (1013), Expect = e-122
 Identities = 229/533 (42%), Positives = 316/533 (59%), Gaps = 8/533 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQK-HEANLSQTLV 179
            A+KGT L+N+K+    I IR SMVKVE D      P  DSLEI  I  + ++A LS+ L+
Sbjct: 490  AVKGTFLVNRKIGSRKIHIRPSMVKVEIDPTISSIPTFDSLEIVAISHRPNKAYLSKNLI 549

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            +LL+YGGV   +F  L   ALE+       +  A K+    + +DD+    RM+S+GIP+
Sbjct: 550  SLLSYGGVHKEYFMELLGSALEETKQVRLRKRAALKVAINYREMDDECLTARMISSGIPL 609

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            NEP L  RL      +   +R GK+ +++S+Y+MGTADP+G L+ NEVC+ILD+GQVSG 
Sbjct: 610  NEPHLHARLSRLAKIERTKLRGGKLPINDSFYLMGTADPTGVLESNEVCVILDNGQVSGR 669

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGDVH+ KA YV+E+ ++VGDAK+GIFFST+G R  A EIA GDFDGD+Y
Sbjct: 670  VLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKGPRXAATEIANGDFDGDMY 729

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV IN+ V+  Y     W              ++FS+++LE  LF QFL  +   +N++ 
Sbjct: 730  WVSINRKVVDSYTTSRPWIRMHSTPKAVSKKPSEFSADELEYELFRQFLEAKSKGANMS- 788

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
             AA+SW+A+MDRLL        +   L  KML L+DIYY ALDA ++G KV +P+ L+A 
Sbjct: 789  LAADSWLAFMDRLLMLRDDNVDDMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHYLKAN 848

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEETN 1259
            K PH M   + C+    Y STS+LG++YD     + D   ++     +I  LP F  E  
Sbjct: 849  KFPHYMEKGNSCS----YHSTSILGQIYD-----HVDSYPDEDLCITEISKLPCFEVEIP 899

Query: 1260 KK--TLWMKHYEIYRSEMSNAMDSPDSSRV---NDXXXXXXXXXXXADCLDESSENRSDI 1424
            ++  TLW   YE Y+ +M+ AM+     R+   N+           A   +++     DI
Sbjct: 900  QRCMTLWRGRYEEYKKDMTRAMNLDCELRITSCNEVIKKYKMLLYGAVEFEQTVRKTEDI 959

Query: 1425 YDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIY--FEKHHKNPILIS 1577
            +DEA AIY V YD A+    + KC FAW VAG ALC I+  + K    PIL S
Sbjct: 960  FDEALAIYHVTYDNARIAYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPILPS 1012


>CDP03268.1 unnamed protein product [Coffea canephora]
          Length = 875

 Score =  390 bits (1003), Expect = e-122
 Identities = 228/544 (41%), Positives = 323/544 (59%), Gaps = 11/544 (2%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQK-HEANLSQTLV 179
            A+KGTLL+N+K       IRSSMVKV+RD     +P  DSLEI  +  K     LS+ L+
Sbjct: 350  AVKGTLLVNRK-------IRSSMVKVKRDIRCPVAPTFDSLEIVAVSHKPRRCQLSKNLI 402

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL+YGGVP +FF  +    LE+      +   A K+  +N  +DD +T  RM+ AG+P+
Sbjct: 403  ALLSYGGVPRNFFLDILRTVLEETQALFTNLHAALKVSIRNGDMDDGWTTARMILAGVPL 462

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            +EP LQ RL +    + K++++GK+ +  S+YVMGTADP+G LK NEVC+IL++GQ+SG 
Sbjct: 463  SEPHLQDRLAKLANFERKSLKEGKLPISESFYVMGTADPTGLLKANEVCVILENGQISGK 522

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYRNPG HFGDVH+ +A YVKE+E+++G+AKFGIFFST+G+RS A+EIA GDFDGD+Y
Sbjct: 523  VLVYRNPGLHFGDVHVLEAVYVKELEDVIGNAKFGIFFSTKGQRSVANEIANGDFDGDMY 582

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  N  +LK ++    W              +DFS+E LE  LF   L  R    N+  
Sbjct: 583  WVSRNPQLLKYFRASEPWTRVYSSPPAENKKPSDFSAEALEYELFRLSLEKRKQSFNM-A 641

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
             AA+SW+A+MDRLL      + + D L +++L LVDIYY ALDA ++G KV +P++L A+
Sbjct: 642  VAAHSWLAFMDRLLVLRDENAGDTDGLRQQILKLVDIYYDALDAPKSGKKVNVPSDLIAK 701

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDFLEETN 1259
              PH M   +       Y STS+LG+++D      ++    + +  G+I  LP F     
Sbjct: 702  SYPHYMGKGNS------YHSTSILGDIFD-----QTEQFQSERRSIGEIWKLPCFNSRIP 750

Query: 1260 KK--TLWMKHYEIYRSEMSNAM------DSPDSSRVNDXXXXXXXXXXXADCLDESSENR 1415
            ++  ++WM  Y+ YR EM +A+      D   +   +            A  L ES +  
Sbjct: 751  EEYLSMWMARYDDYRYEMRDALEQNPADDDLKNKAADRVIKKYKELLYEAAELQESKKKM 810

Query: 1416 SDIYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEKHHKN--PILISASKL 1589
             +I +EA AIY V YD+A   G + KC FAW VAG ALC ++      N  P+L+  S L
Sbjct: 811  EEINNEALAIYHVSYDHAIGRGCISKCSFAWRVAGSALCNLHASNTSTNEYPMLVVPSVL 870

Query: 1590 YSIL 1601
             + L
Sbjct: 871  RNAL 874


>XP_019078598.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3 [Vitis
            vinifera] XP_019078599.1 PREDICTED: probable
            RNA-dependent RNA polymerase 5 isoform X3 [Vitis
            vinifera]
          Length = 813

 Score =  389 bits (998), Expect = e-122
 Identities = 225/523 (43%), Positives = 308/523 (58%), Gaps = 7/523 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIG-QKHEANLSQTLV 179
            A+KGTLLLN+KLP  TI IR SM+KVE D     +  V+S+EI     Q   + LS+ L+
Sbjct: 285  AVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYLI 344

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL+YGGVP+ +F  L   ALED     +  ++A   +    G  DD  V RM+ +GIP+
Sbjct: 345  ALLSYGGVPNEYFMNLLKDALEDAP-SVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPI 403

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            +EPFL   L   +  + K +R GK+ +++ +Y+MGTADP+G LK +EVCIILDHGQV G 
Sbjct: 404  DEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGR 463

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVY++PG HFGD+H+  ATYV+ +EE VG+AK+ IFF  +G RS ADE+A  DFDGD+Y
Sbjct: 464  VLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMY 523

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNITG 899
            WV  N+ +L+ ++    W              TDFS ++LE  LF  FLT RF  S+  G
Sbjct: 524  WVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIG 583

Query: 900  SAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRAQ 1079
             AA++W+ +MDRLLT     S E + L  KML L DIYY ALDA ++G KV +  EL+A+
Sbjct: 584  MAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAE 643

Query: 1080 KMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDF-LEET 1256
            K PH M  +S       Y STS+LG++YD       +    + + T +I  LP F ++  
Sbjct: 644  KFPHFMGRESS------YHSTSILGQIYDA-----VESFQPENQSTKEIWRLPLFNIDAV 692

Query: 1257 NKKTL--WMKHYEIYRSEMSNAMDSPDSSR---VNDXXXXXXXXXXXADCLDESSENRSD 1421
             +  L  W   Y+ YRSEM+ A+     ++     +           A   +ES  N  D
Sbjct: 693  PQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLED 752

Query: 1422 IYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEK 1550
            I+DEA AIY V Y++  N   V  C F W VAG ALC++Y  K
Sbjct: 753  IFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVK 795


>XP_017241744.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1 [Daucus
            carota subsp. sativus] XP_017241745.1 PREDICTED: probable
            RNA-dependent RNA polymerase 3 isoform X2 [Daucus carota
            subsp. sativus] KZN01938.1 hypothetical protein
            DCAR_010692 [Daucus carota subsp. sativus]
          Length = 1050

 Score =  394 bits (1011), Expect = e-122
 Identities = 224/525 (42%), Positives = 318/525 (60%), Gaps = 9/525 (1%)
 Frame = +3

Query: 3    AIKGTLLLNKKLPDNTIVIRSSMVKVERDENYVGSPAVDSLEICNIGQKH-EANLSQTLV 179
            A+KGTLL+N+KLP  TI IR SMVKVE D N+ G+P+++SLE+ NI +K  ++ LS+ L+
Sbjct: 522  AVKGTLLVNRKLPLGTIQIRPSMVKVEADPNFEGAPSINSLEVVNISRKPGKSRLSKYLI 581

Query: 180  ALLNYGGVPDSFFKALTWRALEDLSIKCRDEEKAWKLLKQNQGLDDDYTVLRMLSAGIPV 359
            ALL  GGVP+ FF  +   ALED      D+  A +    +  +DDD+T  RM+ +G+P+
Sbjct: 582  ALLYLGGVPEQFFMNILADALEDSQRLFSDKRSAVRASVNHGTIDDDFTTARMILSGVPL 641

Query: 360  NEPFLQQRLREYLTNDIKNIRKGKVHLDNSYYVMGTADPSGRLKPNEVCIILDHGQVSGD 539
            +EP +Q RL     ++ K +R+G++ +  S+++MGTADP+G L  +EVC+ILD+GQVSG 
Sbjct: 642  DEPCVQHRLSHLAYSERKGLRQGRLPISESFFLMGTADPTGLLNSDEVCVILDNGQVSGK 701

Query: 540  VLVYRNPGRHFGDVHLYKATYVKEIEEIVGDAKFGIFFSTQGKRSGADEIAGGDFDGDLY 719
            VLVYR PG HFGD+H+  A Y+KE+E++VG+AK+GIFFST+G+RS A EIA GDFDGD+Y
Sbjct: 702  VLVYRFPGLHFGDIHVLNAVYLKELEDVVGNAKYGIFFSTKGERSVASEIANGDFDGDMY 761

Query: 720  WVCINKTVLKDYKLQPSWXXXXXXXXXXXXXXTDFSSEDLEQCLFDQFLTCRFSPSNIT- 896
            WV  N  +L  +K    W              +D  +++LE  LF  FL  +    NI+ 
Sbjct: 762  WVSRNNQLLHYFKKSTPWTRMHPSPNKFQVKPSDIPNDELEHKLFKLFLDTK--NQNISM 819

Query: 897  GSAANSWMAYMDRLLTPIVAESKEADLLTEKMLLLVDIYYKALDASRTGSKVELPNELRA 1076
            G AA+SWMA+MD+ LT +   S E + L + +L L+DIYY ALDA +TG +V +P E RA
Sbjct: 820  GVAADSWMAFMDKFLT-LDDNSVEKNKLKKTILKLIDIYYDALDAPKTGKEVTIPKEYRA 878

Query: 1077 QKMPHCMNDDSDCNLDDYYMSTSLLGELYDLKLDSNSDDIDEKAKKTGDIVMLPDF---- 1244
               PH M           Y STS+LG++ D       D    K     +I  LP F    
Sbjct: 879  DSYPHYMEKGK------AYDSTSVLGKICDA-----VDTYVPKRVLASEIKKLPLFELVP 927

Query: 1245 LEETNKKTLWMKHYEIYRSEMSNAMDSPDSSRV---NDXXXXXXXXXXXADCLDESSENR 1415
            + +   K  W + Y+ YR++MS+A+ S + S +   +D           A   ++S    
Sbjct: 928  IPDAKLK-FWKEIYDNYRTDMSSALSSTNQSEMKPADDVFSKYKKILYGAADFEQSPRKW 986

Query: 1416 SDIYDEARAIYQVVYDYAQNIGDVRKCRFAWFVAGEALCEIYFEK 1550
             DIY +A A+Y   YDYA++ GDV KC FAW +AG ALC  +  K
Sbjct: 987  DDIYVDAVALYHACYDYARSKGDVTKCNFAWRIAGHALCNFHVAK 1031