BLASTX nr result

ID: Ephedra29_contig00004950 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00004950
         (941 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR17468.1 unknown [Picea sitchensis]                                  94   2e-17
OAP10011.1 CSLB04 [Arabidopsis thaliana]                               59   4e-06
NP_180813.1 cellulose synthase-like B4 [Arabidopsis thaliana] O8...    59   4e-06
OAY72481.1 Cellulose synthase A catalytic subunit 5 (UDP-forming...    57   7e-06
OAP11728.1 hypothetical protein AXX17_AT2G28870 [Arabidopsis tha...    58   8e-06

>ABR17468.1 unknown [Picea sitchensis]
          Length = 785

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/108 (44%), Positives = 65/108 (60%)
 Frame = +1

Query: 616 NIKERKEMDAQSEDKSPLFETTVETPYMNRVYALVHLGLFVCFLVLRLFYGPIKQECYGV 795
           N+  R E    + +  PL+E  VE P + R YA +H  L + FL  RL   P+  E Y +
Sbjct: 7   NLTLRMEKQMIAINSPPLYEKIVEKPKLYRAYAFLHFVLTLSFLGYRLL-NPL-DESYRI 64

Query: 796 WIIALCCEAYFAFTWLLEHNLRWHKLTYKTHLQRFDQRYGGSSACKLP 939
           WI+A  CE +FAF W+LE N+RW  + YKT+ +RF QRY G S+ KLP
Sbjct: 65  WILAFACEIWFAFQWILEWNMRWLFVDYKTYPERFAQRYSGESSSKLP 112


>OAP10011.1 CSLB04 [Arabidopsis thaliana]
          Length = 755

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 33/91 (36%), Positives = 43/91 (47%)
 Frame = +1

Query: 637 MDAQSEDKSPLFETTVETPYMNRVYALVHLGLFVCFLVLRLFYGPIKQECYGVWIIALCC 816
           M   S    PL E      Y  R   L  LGL +  L+ R+ +   K     VWI+A  C
Sbjct: 1   MAESSSPLPPLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDT---VWIVAFLC 57

Query: 817 EAYFAFTWLLEHNLRWHKLTYKTHLQRFDQR 909
           E  F F WLL  N++W    YKT+ +R D+R
Sbjct: 58  ETCFTFVWLLITNIKWSPADYKTYPERLDER 88


>NP_180813.1 cellulose synthase-like B4 [Arabidopsis thaliana] O80891.1 RecName:
           Full=Cellulose synthase-like protein B4; Short=AtCslB4
           AAC25936.1 putative cellulose synthase [Arabidopsis
           thaliana] AEC08698.1 cellulose synthase-like B4
           [Arabidopsis thaliana] AHL38820.1 glycosyltransferase,
           partial [Arabidopsis thaliana]
          Length = 755

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 33/91 (36%), Positives = 43/91 (47%)
 Frame = +1

Query: 637 MDAQSEDKSPLFETTVETPYMNRVYALVHLGLFVCFLVLRLFYGPIKQECYGVWIIALCC 816
           M   S    PL E      Y  R   L  LGL +  L+ R+ +   K     VWI+A  C
Sbjct: 1   MAESSSPLPPLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDT---VWIVAFLC 57

Query: 817 EAYFAFTWLLEHNLRWHKLTYKTHLQRFDQR 909
           E  F F WLL  N++W    YKT+ +R D+R
Sbjct: 58  ETCFTFVWLLITNIKWSPADYKTYPERLDER 88


>OAY72481.1 Cellulose synthase A catalytic subunit 5 (UDP-forming), partial
           [Ananas comosus]
          Length = 282

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = +1

Query: 595 YIATKKTN-IKERKEMDAQSEDKSPLFETTVETPYMNRVYALVHLGLFVCFLVLRLFYGP 771
           YI+ ++ N IK+ +E       K P+  + + +PY  RV  +  L     F   RL Y P
Sbjct: 67  YISERELNEIKKHEEFRQPLSRKVPVPSSKI-SPY--RVAVIFRLVALAFFFRYRLLY-P 122

Query: 772 IKQECYGVWIIALCCEAYFAFTWLLEHNLRWHKLTYKTHLQRFDQRY 912
           +  + +G+W+ ++ CEA+F+F+WLLE   +W  +  +T+ QR   RY
Sbjct: 123 VS-DAHGLWLTSVICEAWFSFSWLLEQLPKWKPIKRETYTQRLSFRY 168


>OAP11728.1 hypothetical protein AXX17_AT2G28870 [Arabidopsis thaliana]
          Length = 571

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 30/91 (32%), Positives = 47/91 (51%)
 Frame = +1

Query: 637 MDAQSEDKSPLFETTVETPYMNRVYALVHLGLFVCFLVLRLFYGPIKQECYGVWIIALCC 816
           M   S    PL E      Y  RV  L  LGL    L+ R+    +  +   VW++A  C
Sbjct: 1   MADSSSSLPPLCEKISYKNYFLRVVDLTILGLLFSLLLYRIL---LMNQNNSVWVVAFLC 57

Query: 817 EAYFAFTWLLEHNLRWHKLTYKTHLQRFDQR 909
           E++F+F WLL  +++W   +YK++ +R D+R
Sbjct: 58  ESFFSFIWLLITSIKWSPASYKSYPERLDER 88


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