BLASTX nr result

ID: Ephedra29_contig00004865 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00004865
         (360 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ADE77592.1 unknown [Picea sitchensis]                                  69   3e-11
AJP06287.1 DRB4 [Pinus tabuliformis]                                   67   1e-10
JAT49715.1 Double-stranded RNA-binding protein 2 [Anthurium amni...    67   1e-10
KNA17177.1 hypothetical protein SOVF_082520, partial [Spinacia o...    64   3e-10
2N3F_A Chain A, Solution Structure Of Both Dsrbds Of Drb4 Along ...    63   4e-10
CDP19829.1 unnamed protein product [Coffea canephora]                  65   8e-10
BAJ95715.1 predicted protein [Hordeum vulgare subsp. vulgare]          65   9e-10
XP_020163811.1 double-stranded RNA-binding protein 2-like [Aegil...    64   1e-09
EMT33749.1 Ribonuclease 3 [Aegilops tauschii]                          64   1e-09
EMS63735.1 Double-stranded RNA-binding protein 2 [Triticum urartu]     64   1e-09
CDO99741.1 unnamed protein product [Coffea canephora]                  61   1e-09
XP_009116940.1 PREDICTED: double-stranded RNA-binding protein 4 ...    64   1e-09
XP_013716585.1 PREDICTED: double-stranded RNA-binding protein 4-...    64   1e-09
XP_013711979.1 PREDICTED: double-stranded RNA-binding protein 4 ...    64   1e-09
XP_013604118.1 PREDICTED: double-stranded RNA-binding protein 4 ...    64   1e-09
CDY11449.1 BnaA09g40150D [Brassica napus]                              64   1e-09
CDX76663.1 BnaC08g32490D [Brassica napus]                              64   1e-09
EOY33183.1 Ribonuclease 3, putative [Theobroma cacao]                  64   2e-09
XP_004960271.1 PREDICTED: double-stranded RNA-binding protein 2-...    64   2e-09
XP_016673673.1 PREDICTED: double-stranded RNA-binding protein 2-...    64   2e-09

>ADE77592.1 unknown [Picea sitchensis]
          Length = 505

 Score = 68.9 bits (167), Expect = 3e-11
 Identities = 35/75 (46%), Positives = 46/75 (61%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           MFK  L  +A +  V  PEY   +EGP HAPRF+A+VT     F S  F KT K+AQN A
Sbjct: 1   MFKNRLQEVAQKHCVSLPEYKSTREGPDHAPRFKATVTYNGRAFESPAFCKTAKEAQNAA 60

Query: 61  AELAVQALLQRQREK 17
           AE A++ LL +  ++
Sbjct: 61  AEFALEVLLGKAEQR 75



 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 28/68 (41%), Positives = 41/68 (60%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M K  L  LAL      P Y+  ++GP H P F+A VT  +ETF S  F+ T +QA++ A
Sbjct: 266 MHKNQLQDLALRGGFSLPSYSSTRKGPPHVPLFKAFVTFKEETFESPDFYGTLRQAEHAA 325

Query: 61  AELAVQAL 38
           A +A+++L
Sbjct: 326 AAVALKSL 333


>AJP06287.1 DRB4 [Pinus tabuliformis]
          Length = 550

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 39/78 (50%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           MFK  L  LA    +  PEY  IK GP HAPRF+A VT    TF S    +T K+AQN A
Sbjct: 1   MFKNRLQELAQRHCLSLPEYKSIKNGPDHAPRFKAIVTYNGRTFESPALCRTAKEAQNAA 60

Query: 61  AELAVQALLQR--QREKE 14
           AE A+  LL R  QR K+
Sbjct: 61  AEFALDVLLGRADQRPKQ 78



 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 26/71 (36%), Positives = 42/71 (59%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M K  L  LA       P Y+ +++GP H P F+A VT   ET+ S  F+ T +QA++ A
Sbjct: 266 MHKNQLQDLAFRGGFSLPSYSSVRKGPPHVPLFKAFVTFEGETYESPEFYGTLRQAEHAA 325

Query: 61  AELAVQALLQR 29
           A +A+++L ++
Sbjct: 326 AAVALKSLTKK 336


>JAT49715.1 Double-stranded RNA-binding protein 2 [Anthurium amnicola]
          Length = 622

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 35/75 (46%), Positives = 44/75 (58%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K  L  LA       P YA I+EGP HAPRF+A+VT   E F S  FH T +QA++ A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVTFNGEVFESPTFHTTLRQAEHAA 60

Query: 61  AELAVQALLQRQREK 17
           AE+A+  L  R   K
Sbjct: 61  AEVALNTLSNRSPSK 75


>KNA17177.1 hypothetical protein SOVF_082520, partial [Spinacia oleracea]
          Length = 155

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 34/75 (45%), Positives = 42/75 (56%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K  L  LA       P YA I+EGP HAPRF+ASV    E F S  F  T +QA++ A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKASVNFNGEIFDSPAFFSTLRQAEHSA 60

Query: 61  AELAVQALLQRQREK 17
           AE+A+  L  R   K
Sbjct: 61  AEVALNTLADRGPSK 75


>2N3F_A Chain A, Solution Structure Of Both Dsrbds Of Drb4 Along With
           Linker (viz. Drb4(1-153)) 2N3G_A Chain A, Solution
           Structure Of Drb4 Dsrbd1 (viz. Drb4(1-72)) 2N3H_A Chain
           A, Solution Structure Of Drb4 Dsrbd2 (viz. Drb4(81-151))
          Length = 153

 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 31/74 (41%), Positives = 46/74 (62%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           ++K  L + AL+  +  P YA  +EGP HAPRFR +VT   +TF S+ F  T K A++ A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AELAVQALLQRQRE 20
           A++AV +L  +  E
Sbjct: 64  AKIAVASLTPQSPE 77


>CDP19829.1 unnamed protein product [Coffea canephora]
          Length = 389

 Score = 64.7 bits (156), Expect = 8e-10
 Identities = 33/71 (46%), Positives = 43/71 (60%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K  L  LA       P Y  I+EGP HAPRF+ASV    ETF S  +H T +QA++ A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGETFESPHYHSTLRQAEHAA 60

Query: 61  AELAVQALLQR 29
           AE+A+ +L  R
Sbjct: 61  AEVALNSLATR 71


>BAJ95715.1 predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 580

 Score = 64.7 bits (156), Expect = 9e-10
 Identities = 34/71 (47%), Positives = 45/71 (63%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           MFK  L  LA       P YA I+EGP HAPRF+A+VT   E+F S  F+ T +QA++ A
Sbjct: 1   MFKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVTFNGESFESPGFYSTLRQAEHAA 60

Query: 61  AELAVQALLQR 29
           AE+A+  L +R
Sbjct: 61  AEVALNELSKR 71


>XP_020163811.1 double-stranded RNA-binding protein 2-like [Aegilops tauschii
           subsp. tauschii]
          Length = 571

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 34/71 (47%), Positives = 45/71 (63%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           MFK  L  LA       P YA I+EGP HAPRF+A+VT   E+F S  F+ T +QA++ A
Sbjct: 1   MFKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVTFNGESFESPGFYPTLRQAEHAA 60

Query: 61  AELAVQALLQR 29
           AE+A+  L +R
Sbjct: 61  AEVALNELSKR 71


>EMT33749.1 Ribonuclease 3 [Aegilops tauschii]
          Length = 691

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 34/71 (47%), Positives = 45/71 (63%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           MFK  L  LA       P YA I+EGP HAPRF+A+VT   E+F S  F+ T +QA++ A
Sbjct: 90  MFKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVTFNGESFESPGFYPTLRQAEHAA 149

Query: 61  AELAVQALLQR 29
           AE+A+  L +R
Sbjct: 150 AEVALNELSKR 160


>EMS63735.1 Double-stranded RNA-binding protein 2 [Triticum urartu]
          Length = 714

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 34/71 (47%), Positives = 45/71 (63%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           MFK  L  LA       P YA I+EGP HAPRF+A+VT   E+F S  F+ T +QA++ A
Sbjct: 144 MFKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVTFNGESFESPGFYPTLRQAEHAA 203

Query: 61  AELAVQALLQR 29
           AE+A+  L +R
Sbjct: 204 AEVALNELSKR 214


>CDO99741.1 unnamed protein product [Coffea canephora]
          Length = 128

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 32/71 (45%), Positives = 42/71 (59%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K  L  LA       P Y  I+EGP HAPRF+A+V    ETF S  +  T +QA++ A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGETFESPHYCSTLRQAEHSA 60

Query: 61  AELAVQALLQR 29
           AE+A+ AL  R
Sbjct: 61  AEMALNALAGR 71


>XP_009116940.1 PREDICTED: double-stranded RNA-binding protein 4 [Brassica rapa]
          Length = 322

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 32/68 (47%), Positives = 46/68 (67%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K+ L S AL++ +  P YA  ++GPAHAPRFR  VTV  +TF S  F  T K A++ A
Sbjct: 4   MYKSQLQSYALKQNMELPVYAAERQGPAHAPRFRCKVTVCGQTFQSQEFCPTLKAAEHAA 63

Query: 61  AELAVQAL 38
           A++A+ +L
Sbjct: 64  AKVALASL 71


>XP_013716585.1 PREDICTED: double-stranded RNA-binding protein 4-like [Brassica
           napus]
          Length = 323

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 32/68 (47%), Positives = 46/68 (67%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K+ L S AL++ +  P YA  ++GPAHAPRFR  VTV  +TF S  F  T K A++ A
Sbjct: 4   MYKSQLQSYALKQNMELPVYAAERQGPAHAPRFRCKVTVCGQTFQSQEFCPTLKAAEHAA 63

Query: 61  AELAVQAL 38
           A++A+ +L
Sbjct: 64  AKVALASL 71


>XP_013711979.1 PREDICTED: double-stranded RNA-binding protein 4 [Brassica napus]
          Length = 324

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 32/68 (47%), Positives = 46/68 (67%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K+ L S AL++ +  P YA  ++GPAHAPRFR  VTV  +TF S  F  T K A++ A
Sbjct: 4   MYKSQLQSYALKQNMELPVYAAERQGPAHAPRFRCKVTVCGQTFQSQEFCPTLKAAEHAA 63

Query: 61  AELAVQAL 38
           A++A+ +L
Sbjct: 64  AKVALASL 71


>XP_013604118.1 PREDICTED: double-stranded RNA-binding protein 4 [Brassica oleracea
           var. oleracea]
          Length = 325

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 32/68 (47%), Positives = 46/68 (67%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K+ L S AL++ +  P YA  ++GPAHAPRFR  VTV  +TF S  F  T K A++ A
Sbjct: 4   MYKSQLQSYALKQNMELPVYAAERQGPAHAPRFRCKVTVCGQTFQSQEFCPTLKAAEHAA 63

Query: 61  AELAVQAL 38
           A++A+ +L
Sbjct: 64  AKVALASL 71


>CDY11449.1 BnaA09g40150D [Brassica napus]
          Length = 331

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 32/68 (47%), Positives = 46/68 (67%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K+ L S AL++ +  P YA  ++GPAHAPRFR  VTV  +TF S  F  T K A++ A
Sbjct: 4   MYKSQLQSYALKQNMELPVYAAERQGPAHAPRFRCKVTVCGQTFQSQEFCPTLKAAEHAA 63

Query: 61  AELAVQAL 38
           A++A+ +L
Sbjct: 64  AKVALASL 71


>CDX76663.1 BnaC08g32490D [Brassica napus]
          Length = 335

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 32/68 (47%), Positives = 46/68 (67%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K+ L S AL++ +  P YA  ++GPAHAPRFR  VTV  +TF S  F  T K A++ A
Sbjct: 4   MYKSQLQSYALKQNMELPVYAAERQGPAHAPRFRCKVTVCGQTFQSQEFCPTLKAAEHAA 63

Query: 61  AELAVQAL 38
           A++A+ +L
Sbjct: 64  AKVALASL 71


>EOY33183.1 Ribonuclease 3, putative [Theobroma cacao]
          Length = 368

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 32/73 (43%), Positives = 47/73 (64%)
 Frame = -3

Query: 268 VFACCKKGRMFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHK 89
           +FA   KG+M+KA L  L  +++   P Y  +K+GP H PRF+ASV +   +F S+   K
Sbjct: 16  LFAKKAKGKMYKAKLQELCQQKRWALPRYTSMKDGPDHIPRFKASVFLNGMSFHSSTSCK 75

Query: 88  TYKQAQNDAAELA 50
           + K+AQNDAA+ A
Sbjct: 76  SCKEAQNDAAKSA 88


>XP_004960271.1 PREDICTED: double-stranded RNA-binding protein 2-like [Setaria
           italica] XP_004960272.1 PREDICTED: double-stranded
           RNA-binding protein 2-like [Setaria italica] KQL13040.1
           hypothetical protein SETIT_021689mg [Setaria italica]
           KQL13041.1 hypothetical protein SETIT_021689mg [Setaria
           italica]
          Length = 542

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 33/71 (46%), Positives = 44/71 (61%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           M+K  L  LA       P YA I+EGP HAPRF+A+V    ETF S +F  T +QA++ A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPVFCSTLRQAEHAA 60

Query: 61  AELAVQALLQR 29
           AE+A+  L +R
Sbjct: 61  AEVALNELSKR 71


>XP_016673673.1 PREDICTED: double-stranded RNA-binding protein 2-like isoform X2
           [Gossypium hirsutum]
          Length = 543

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 33/71 (46%), Positives = 43/71 (60%)
 Frame = -3

Query: 241 MFKANLHSLALERKVGQPEYAQIKEGPAHAPRFRASVTVADETFTSTIFHKTYKQAQNDA 62
           MFK  L  LA       P Y+ I+EGP HAPRF+A+V    ETF S +F  T +QA++ A
Sbjct: 1   MFKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGETFESPMFCSTLRQAEHAA 60

Query: 61  AELAVQALLQR 29
           AE+A+  L  R
Sbjct: 61  AEIALNTLANR 71


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