BLASTX nr result

ID: Ephedra29_contig00004800 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00004800
         (456 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAB44458.1 putative MADS domain transcription factor GGM12, part...    55   2e-06

>CAB44458.1 putative MADS domain transcription factor GGM12, partial [Gnetum
           gnemon]
          Length = 208

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
 Frame = -2

Query: 455 MKDVLDKYNRNFQGKEQRHEIEIDSTEIMAAXXXXXXXXXXXXXXLGENXXXXXXXXXXX 276
           MK +L++Y  +F+ K    + EID+ +++ A              LGE+           
Sbjct: 34  MKVLLERYENDFREKGTARDQEIDNGDVLKAQQQVAELERARRQMLGEDLEGLSLKQLQI 93

Query: 275 XXXXXXXXXXLVRLHK-VQILQRNIHELQNKGKAMIEDNNNLRKQLEERQGTIS--RNKE 105
                      VR  K VQIL ++I++LQ KG+ ++E+NN LR+QL +R    +   N E
Sbjct: 94  LEANLETALNRVRNRKGVQIL-KDINDLQRKGQEILEENNRLRQQLRQRYNNRAPLENFE 152

Query: 104 SEDIFPLKQREDTQPSTQFVSTTLSFSFN 18
           +E+  P+ Q    +P     S ++S SF+
Sbjct: 153 AEESLPIGQLLAHEPPQSQSSDSISTSFS 181


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