BLASTX nr result
ID: Ephedra29_contig00004666
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00004666
(2697 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006849976.2 PREDICTED: RNA polymerase I-specific transcriptio... 563 0.0
ERN11557.1 hypothetical protein AMTR_s00022p00154500 [Amborella ... 513 e-169
XP_010272853.1 PREDICTED: RNA polymerase I-specific transcriptio... 491 e-160
XP_010272854.1 PREDICTED: RNA polymerase I-specific transcriptio... 489 e-159
OAE26425.1 hypothetical protein AXG93_131s1350 [Marchantia polym... 491 e-159
XP_002963952.1 hypothetical protein SELMODRAFT_405493 [Selaginel... 471 e-152
XP_002967968.1 hypothetical protein SELMODRAFT_440149 [Selaginel... 471 e-152
XP_006483466.1 PREDICTED: RNA polymerase I-specific transcriptio... 466 e-150
XP_001775034.1 predicted protein [Physcomitrella patens] EDQ6014... 466 e-150
XP_006483559.1 PREDICTED: RNA polymerase I-specific transcriptio... 461 e-148
XP_016742241.1 PREDICTED: RNA polymerase I-specific transcriptio... 461 e-148
XP_016739728.1 PREDICTED: RNA polymerase I-specific transcriptio... 461 e-148
XP_012470198.1 PREDICTED: RNA polymerase I-specific transcriptio... 460 e-148
XP_010033606.1 PREDICTED: RNA polymerase I-specific transcriptio... 458 e-147
XP_010649342.1 PREDICTED: RNA polymerase I-specific transcriptio... 457 e-147
OAY37304.1 hypothetical protein MANES_11G091200 [Manihot esculenta] 456 e-146
EOX90600.1 Major facilitator superfamily protein isoform 1 [Theo... 454 e-145
KCW53301.1 hypothetical protein EUGRSUZ_J02557 [Eucalyptus grandis] 453 e-145
XP_007046444.2 PREDICTED: RNA polymerase I-specific transcriptio... 449 e-144
OAY61017.1 hypothetical protein MANES_01G157300 [Manihot esculenta] 449 e-143
>XP_006849976.2 PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3 [Amborella trichopoda]
Length = 671
Score = 563 bits (1451), Expect = 0.0
Identities = 303/642 (47%), Positives = 414/642 (64%), Gaps = 22/642 (3%)
Frame = +3
Query: 201 SQAFRMDSEILSAARLWIRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQA 380
S + DS+ LS LWIR AL S E D T Y +L+ ++ E G+ ++E++ TL+A
Sbjct: 16 SDGYASDSDTLSILGLWIRNALNSATESDFTKYMELVRKINDAEPGNSEEEESLAFTLRA 75
Query: 381 LSQAVSSINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVR 560
LSQ SSI+ HH +L+S I +S WN VAD L+EFI+NLA +NG FVD CLDMLVR
Sbjct: 76 LSQTTSSISRDHHLALISSIFSISIWNCARVVADSLLEFIINLALANGGFVDECLDMLVR 135
Query: 561 NXXXXXXXXXXXXXXXTSKMM----LVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAE 728
N T ++M + N+ E + + + L RK+EVLD VH A+ +IA
Sbjct: 136 NFLPPACGLSHVVDSFTRRLMGQTNIANQHELLSKLMHQQLQRKEEVLDLVHSALHKIAS 195
Query: 729 IVPTAALRLQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIE 908
+VPTA+LRL PII RMPHR L +WN L+++NMLR+ SAIGE IG+++LMAVVDRLIE
Sbjct: 196 LVPTASLRLLPIIFNRMPHRVLLRDWNVLFVDNMLRLHRSAIGEFIGNKLLMAVVDRLIE 255
Query: 909 IDVEIRWEDIGHDDLSKVYIFDMEMDDDYETE------------HSGAPHKEKLGDVADK 1052
IDVEI WEDI DD SKV +FD+E++ E + H K L DVA+K
Sbjct: 256 IDVEIGWEDILQDDPSKV-LFDIELEGFEENDECHGKPGIEASHHFRDASKHSLADVAEK 314
Query: 1053 MDVLMELTLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEIC 1232
MD LME+T EHL++C E + +V++TL+ SFQTT+L T+KSKFTQFL+FY+CSL PE C
Sbjct: 315 MDCLMEVTFEHLRLCYTENHVDKVFETLLQSFQTTVLGTYKSKFTQFLLFYMCSLDPENC 374
Query: 1233 GAQFASMLCNVFV-SSRAPNTRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQY-- 1403
GA+FA +L ++FV + PNTRM+A AYLAS+LSR +++ S+V+S++KRLVDW +Y
Sbjct: 375 GAKFACLLVDIFVGKNHPPNTRMSAVAYLASYLSRGRFVSSSLVASTLKRLVDWCSEYCK 434
Query: 1404 VSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXX 1583
+ ++ RK +NP HRVFYS CQA+MY++CFR+ +++ P +
Sbjct: 435 IQDELRKPLNPATHRVFYSGCQAVMYVVCFRIGAIMEIPYLK-SHIFRPLESVLHHSLNP 493
Query: 1584 XXXCLPSVVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLK 1763
CLPS+V+EF R+++ VF SL +I + +LESE+S++FGGVERLDMFFPFDPYLLK
Sbjct: 494 LKVCLPSIVEEFLRRTKVADVFTSLATAIVQNLLESENSRTFGGVERLDMFFPFDPYLLK 553
Query: 1764 RSDRFIRPDFTFWTMVQVPIDEDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQDVVEY 1943
RS+RFIRP+F FW+MVQ DED D +++G +D+ + D D+
Sbjct: 554 RSERFIRPNFIFWSMVQ--DDEDDDEFDLNGDDDDDVDECHDYDSSDV--NDDGDDIFMD 609
Query: 1944 LSVNDFQD---AQSDDEEMDAFELSMNRMSITPKKSFLRSMP 2060
+ +QD ++ E D FE SMN+MSITPK + MP
Sbjct: 610 GHMGSYQDEVIGSLNESEFDEFEYSMNKMSITPKSNINWGMP 651
>ERN11557.1 hypothetical protein AMTR_s00022p00154500 [Amborella trichopoda]
Length = 563
Score = 513 bits (1321), Expect = e-169
Identities = 268/546 (49%), Positives = 366/546 (67%), Gaps = 19/546 (3%)
Frame = +3
Query: 201 SQAFRMDSEILSAARLWIRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQA 380
S + DS+ LS LWIR AL S E D T Y +L+ ++ E G+ ++E++ TL+A
Sbjct: 16 SDGYASDSDTLSILGLWIRNALNSATESDFTKYMELVRKINDAEPGNSEEEESLAFTLRA 75
Query: 381 LSQAVSSINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVR 560
LSQ SSI+ HH +L+S I +S WN VAD L+EFI+NLA +NG FVD CLDMLVR
Sbjct: 76 LSQTTSSISRDHHLALISSIFSISIWNCARVVADSLLEFIINLALANGGFVDECLDMLVR 135
Query: 561 NXXXXXXXXXXXXXXXTSKMM----LVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAE 728
N T ++M + N+ E + + + L RK+EVLD VH A+ +IA
Sbjct: 136 NFLPPACGLSHVVDSFTRRLMGQTNIANQHELLSKLMHQQLQRKEEVLDLVHSALHKIAS 195
Query: 729 IVPTAALRLQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIE 908
+VPTA+LRL PII RMPHR L +WN L+++NMLR+ SAIGE IG+++LMAVVDRLIE
Sbjct: 196 LVPTASLRLLPIIFNRMPHRVLLRDWNVLFVDNMLRLHRSAIGEFIGNKLLMAVVDRLIE 255
Query: 909 IDVEIRWEDIGHDDLSKVYIFDMEMDDDYETE------------HSGAPHKEKLGDVADK 1052
IDVEI WEDI DD SKV +FD+E++ E + H K L DVA+K
Sbjct: 256 IDVEIGWEDILQDDPSKV-LFDIELEGFEENDECHGKPGIEASHHFRDASKHSLADVAEK 314
Query: 1053 MDVLMELTLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEIC 1232
MD LME+T EHL++C E + +V++TL+ SFQTT+L T+KSKFTQFL+FY+CSL PE C
Sbjct: 315 MDCLMEVTFEHLRLCYTENHVDKVFETLLQSFQTTVLGTYKSKFTQFLLFYMCSLDPENC 374
Query: 1233 GAQFASMLCNVFV-SSRAPNTRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQY-- 1403
GA+FA +L ++FV + PNTRM+A AYLAS+LSR +++ S+V+S++KRLVDW +Y
Sbjct: 375 GAKFACLLVDIFVGKNHPPNTRMSAVAYLASYLSRGRFVSSSLVASTLKRLVDWCSEYCK 434
Query: 1404 VSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXX 1583
+ ++ RK +NP HRVFYS CQA+MY++CFR+ +++ P +
Sbjct: 435 IQDELRKPLNPATHRVFYSGCQAVMYVVCFRIGAIMEIPYLK-SHIFRPLESVLHHSLNP 493
Query: 1584 XXXCLPSVVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLK 1763
CLPS+V+EF R+++ VF SL +I + +LESE+S++FGGVERLDMFFPFDPYLLK
Sbjct: 494 LKVCLPSIVEEFLRRTKVADVFTSLATAIVQNLLESENSRTFGGVERLDMFFPFDPYLLK 553
Query: 1764 RSDRFI 1781
RS+R++
Sbjct: 554 RSERYL 559
>XP_010272853.1 PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3-like [Nelumbo nucifera] XP_019055181.1 PREDICTED:
RNA polymerase I-specific transcription initiation factor
RRN3-like [Nelumbo nucifera]
Length = 631
Score = 491 bits (1263), Expect = e-160
Identities = 279/614 (45%), Positives = 380/614 (61%), Gaps = 17/614 (2%)
Frame = +3
Query: 252 IRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLL 431
+R AL SV +GD+ YNQL+ + PD+ + +L+ALS ++S I+ HH SLL
Sbjct: 29 VRDALKSVSQGDSDRYNQLIAVMHYTGRLAPDEVAMLVTSLKALSGSISYIDIIHHESLL 88
Query: 432 SWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXXT 611
S I GMS WN+ +V D L+E I++LAASNG FVD CLDMLVRN
Sbjct: 89 SSIFGMSMWNYGPDVMDALVELIISLAASNGKFVDSCLDMLVRN---------------- 132
Query: 612 SKMMLVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALRLQPIIIRRMPHRY 791
+ K L LARK EVLDRVH A+ IA++VP A +RL PII++RMPH +
Sbjct: 133 ---FMPPKSYLDLLGHPRGLARKHEVLDRVHSALSHIADLVPLAPMRLTPIILQRMPHMF 189
Query: 792 LALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIF 971
+Y+E+ML +E+SA+GE++GS MLMA+VDRLI++DVEI W+DI H+D K IF
Sbjct: 190 DKEALIVIYVESMLLLESSALGELVGSTMLMALVDRLIDLDVEISWDDIIHEDSGK-GIF 248
Query: 972 DMEMDD-DYETEHS---------GAPHKEKLGD--VADKMDVLMELTLEHLKVCAEEGRL 1115
DME++D D +H+ G + LG VADK+D LM L EHLK CA+ RL
Sbjct: 249 DMELEDVDDIIDHAEIDGFEHPRGTAGSQILGTNAVADKLDSLMVLICEHLKSCADGERL 308
Query: 1116 QQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASMLCNVFVSSRAPN-T 1292
+V++TL+ SF T+LN +KSKF+QF++FY CSL PE CG +FA L ++FV P T
Sbjct: 309 TKVFETLLQSFWVTVLNAYKSKFSQFVMFYACSLDPEHCGERFAVFLADIFVCRTHPALT 368
Query: 1293 RMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQY--VSNDDRKTMNPKVHRVFYSAC 1466
RM+A AYLAS+LSR K+LPLS+++S++KRLVDW L+Y V N + KT+N + HRVFYS C
Sbjct: 369 RMSAVAYLASYLSRGKFLPLSLIASTLKRLVDWCLEYCHVQNGEEKTINLEAHRVFYSGC 428
Query: 1467 QAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPSVVQEFSRQSQAMHV 1646
QAIMY+LCFRM ++D + + CLPS+V+EF RQ++A H+
Sbjct: 429 QAIMYVLCFRMRSMMDSHRLKSQLLHMPLEPIFCHQLDPLKVCLPSIVEEFLRQAKAAHL 488
Query: 1647 FESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDRFIRPDFTFWTMVQVPID 1826
F + +LES+ SK+FGG+ERLDMFFPFDP LLK+ DRFIRP F +W+MV+ D
Sbjct: 489 FTVSETFLFNNLLESDLSKAFGGMERLDMFFPFDPCLLKKCDRFIRPSFVYWSMVKTTYD 548
Query: 1827 --EDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQDAQSDDEEMDAF 2000
EDC SE+++ E+ + + Y+ + D ++D F
Sbjct: 549 DGEDC------SSEEDI-------------NEYFDGNGKSYMESGITRSLDEHDLDLDEF 589
Query: 2001 ELSMNRMSITPKKS 2042
E +N+MSITP+ S
Sbjct: 590 EYQLNKMSITPRNS 603
>XP_010272854.1 PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3-like [Nelumbo nucifera] XP_010272855.1 PREDICTED:
RNA polymerase I-specific transcription initiation factor
RRN3-like [Nelumbo nucifera]
Length = 631
Score = 489 bits (1258), Expect = e-159
Identities = 279/614 (45%), Positives = 377/614 (61%), Gaps = 17/614 (2%)
Frame = +3
Query: 252 IRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLL 431
+R AL SV +GD+ YNQL+ + PD+ + +L+ALS ++S I+ HH SLL
Sbjct: 29 VRDALKSVSQGDSDHYNQLIAVMHYTGRLAPDEVAMLVTSLKALSGSISYIDIIHHESLL 88
Query: 432 SWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXXT 611
S I GMS WN+ +V D L+E I++LAASNG FVD CLDMLVRN
Sbjct: 89 SSIFGMSMWNYGPDVMDALVELIISLAASNGKFVDSCLDMLVRNFTPP------------ 136
Query: 612 SKMMLVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALRLQPIIIRRMPHRY 791
K L LARK EVLDRVH A+ IA++VP A +RL PII++RMPH +
Sbjct: 137 -------KSYLDLLGHPRGLARKHEVLDRVHSALSHIADLVPLAPMRLTPIILQRMPHMF 189
Query: 792 LALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIF 971
+Y+E+MLR+E+SA+GE +GS MLMA+VDRLI++DVEI W+DI +D K IF
Sbjct: 190 DKETLIVIYVESMLRLESSALGEFVGSTMLMALVDRLIDLDVEISWDDIVLEDSGK-GIF 248
Query: 972 DMEMDDDYE----TEHSGAPH------KEKLGD--VADKMDVLMELTLEHLKVCAEEGRL 1115
DME++D + E G H ++ LG VADK+D LM L EHLK CA+ RL
Sbjct: 249 DMELEDVDDIIGYAEKDGFEHPRGTLGRQSLGTNAVADKLDSLMVLACEHLKSCADGERL 308
Query: 1116 QQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASMLCNVFVSSRAPN-T 1292
+V++TL+ SF TILN +KSKF+QF++FY CSL PE CG +FA L ++FV P T
Sbjct: 309 TKVFETLLQSFWVTILNAYKSKFSQFVMFYACSLDPEHCGERFAVFLADIFVCRTHPALT 368
Query: 1293 RMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQY--VSNDDRKTMNPKVHRVFYSAC 1466
RM+A AYLAS+LSR K+LP S+++S++KRLVDW L+Y V N + KT+ P+ HRVFYS C
Sbjct: 369 RMSAVAYLASYLSRGKFLPPSLIASTLKRLVDWCLEYCQVQNGEEKTLYPETHRVFYSGC 428
Query: 1467 QAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPSVVQEFSRQSQAMHV 1646
QAIMY+LCFRM ++D + + CLPS+V+EF RQ++A H+
Sbjct: 429 QAIMYVLCFRMRSMMDSHRLKSQLLHMPLEPIFRHQLDPLKVCLPSIVEEFLRQAKAAHL 488
Query: 1647 FESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDRFIRPDFTFWTMVQVPID 1826
F + +LES+ SK+FGG+ERLDMFFPFDP LLK+ DRFIRP F +W+MV+ D
Sbjct: 489 FTVSETFLFNNLLESDLSKAFGGMERLDMFFPFDPCLLKKCDRFIRPSFVYWSMVKTTYD 548
Query: 1827 --EDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQDAQSDDEEMDAF 2000
EDC SE+++ E+ + + Y+ + D ++D F
Sbjct: 549 EGEDC------SSEEDI-------------NEYFDGNGKSYMDGGITRSLDEHDLDLDEF 589
Query: 2001 ELSMNRMSITPKKS 2042
E +N+MSITP+ S
Sbjct: 590 ECQLNKMSITPRNS 603
>OAE26425.1 hypothetical protein AXG93_131s1350 [Marchantia polymorpha subsp.
polymorpha]
Length = 716
Score = 491 bits (1265), Expect = e-159
Identities = 276/682 (40%), Positives = 404/682 (59%), Gaps = 63/682 (9%)
Frame = +3
Query: 219 DSEILSAARLWIRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVS 398
D E+LS AR W+ RAL++ +GD Y LL+ L++V+ D L+ALSQ+VS
Sbjct: 27 DDEVLSVARQWVVRALSAATQGDQGHYLNLLKSLRTVQLDDSGSLSALQYRLRALSQSVS 86
Query: 399 SINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXX 578
I+EH+H +LL+ +LGMS W + +VAD L+EF+VNLA +NG V +CLDMLVRN
Sbjct: 87 YISEHYHHTLLALVLGMSVWTYGPDVADALLEFVVNLATANGGCVSQCLDMLVRNFLPPS 146
Query: 579 XXXXXXXXXXTSKMMLVN--KMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALR 752
+ ++ M++I ++ + +A+K VL+++H AI+ +A++VPTA +R
Sbjct: 147 CGLPAFLDTYSRTGLMGGWLSMDKIRAQQPDQMAKKDVVLNQLHAAIRHLADLVPTAPMR 206
Query: 753 LQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWE 932
LQPI++++MPHR L +WN LY+ENMLR+E+S G+ I ++ML AVVD+LI+IDVEIRWE
Sbjct: 207 LQPIVLQKMPHRTLPKQWNVLYLENMLRLESSG-GKYISNQMLPAVVDQLIQIDVEIRWE 265
Query: 933 DIGHDD-LSKVYIFDMEMDDDYE---TEHSGAPHKEK----------------------- 1031
DI DD SKVY+F M+++D+ + + A E
Sbjct: 266 DILTDDETSKVYMFHMDIEDEADERLNDDREADENENGDPAGPGIEAKLQYGLMTRPSKG 325
Query: 1032 ----LGDVADKMDVLMELTLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLI 1199
L ++ADKMD++M++T +HL+ C G QV+D L+ SFQ+T+LNT+KSKFTQFL+
Sbjct: 326 AVPTLDEMADKMDLMMDMTFQHLQSCVGRGLSTQVFDILLKSFQSTVLNTYKSKFTQFLL 385
Query: 1200 FYLCSLAPEICGAQFASMLCNVFVS-SRAPNTRMTAAAYLASFLSRAKYLPLSVVSSSIK 1376
FYLC+L P CG++FAS+LC++F S SR NTRM+AAAYLAS+L+RAKY+P+ V+ +S+K
Sbjct: 386 FYLCALEPSTCGSRFASLLCDIFTSKSRPANTRMSAAAYLASYLARAKYIPVDVIWTSLK 445
Query: 1377 RLVDWSLQYVSND-----DRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXX 1541
RLV W Y ++D + +H VFYS CQA+MYILCFR+ +L+D+P+ +
Sbjct: 446 RLVSWCAAYGTHDLGSKPAGNVPDSVLHGVFYSGCQAVMYILCFRLKMLVDEPEGKRHLR 505
Query: 1542 XXXXXXXXXXXXXXXXXCLPSVVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVE 1721
CLPSVV+EF RQS + + + + +KE L+ + G
Sbjct: 506 GLCLQQVVEHRLNPLKVCLPSVVEEFLRQSSTLQLVDQSHWLASKERLDGNTRSMIVGDM 565
Query: 1722 RLDMFFPFDPYLLKRSDRFIRPDFTFWTMVQVPIDEDCDNIEVDGSEDEMLXXXXXXXXX 1901
RLDMFFPFDPYLL+ SDRFIRP+FT+W+MV+ D ++E D ++
Sbjct: 566 RLDMFFPFDPYLLRHSDRFIRPNFTYWSMVEPLDDIAVSDVEDDDADSISEVSSYGGSQL 625
Query: 1902 XXXREFDNQDVVE----------------------YLSVNDFQDAQ--SDDEEMDAFELS 2009
+ ++N DV + V + A S+D +DAF+ S
Sbjct: 626 DEAQSYENADVTDDDAKENHRPAVSRQIFDNSLNRQTQVGSLEAASPFSEDGLVDAFKHS 685
Query: 2010 MNRMSITPKKSFLRSMPAMLLP 2075
+ M+ITP P M++P
Sbjct: 686 FDAMAITPPH------PEMMMP 701
>XP_002963952.1 hypothetical protein SELMODRAFT_405493 [Selaginella moellendorffii]
EFJ34285.1 hypothetical protein SELMODRAFT_405493
[Selaginella moellendorffii]
Length = 635
Score = 471 bits (1213), Expect = e-152
Identities = 273/635 (42%), Positives = 373/635 (58%), Gaps = 18/635 (2%)
Frame = +3
Query: 219 DSEILSAARLWIRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVS 398
D ++ R WI +AL+ D Y +LL +LK+V+ D + ++ALSQ VS
Sbjct: 19 DKQLQEIVRSWILQALSGE---DIDRYRKLLSDLKNVDFDDSESVSGLAARIRALSQCVS 75
Query: 399 SINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXX 578
INE H LLS + MSFW+ ++E+ D + +VNLA S+G V RCLDMLVRN
Sbjct: 76 IINERDHEMLLSLVFSMSFWSGSNELLDAIENLVVNLATSSGVLVPRCLDMLVRNFLPPS 135
Query: 579 XXXXXXXXXXTSKMMLVNKM--EQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALR 752
T + KM E + K HL+ K +V++RVHLA+Q+I E+VP AALR
Sbjct: 136 CGIKVHLDCYTQDRLARKKMTFESLKGLKPLHLSMKNDVMNRVHLALQRILELVPIAALR 195
Query: 753 LQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWE 932
L PI+ +RMPHR + +WN+L++ENML +++ + I SRML+ +VDRLIEIDVEI WE
Sbjct: 196 LHPIVQQRMPHRRVDKDWNSLFLENMLLLDSKRVSPAISSRMLLGIVDRLIEIDVEIAWE 255
Query: 933 DIGHD-DLSKVYIFDMEMDD----------DYETEHSGAPH--KEKLGDVADKMDVLMEL 1073
DI D D SKV +F M++D+ + + EH+ A H K+ L ++ADKMD LMEL
Sbjct: 256 DILKDEDSSKVLVFHMDVDESDDKQAAPGSEAQLEHALAAHSGKKPLDEIADKMDHLMEL 315
Query: 1074 TLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASM 1253
EHL CA+ RL +VY TLM SF++T+L+T+KSKFTQFLIFYLCSL+P CGA FA
Sbjct: 316 VFEHLHQCAKNERLDEVYTTLMVSFKSTVLDTYKSKFTQFLIFYLCSLSPSSCGANFAGF 375
Query: 1254 LCNVFVSSRAP-NTRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSN--DDRK 1424
LC FV+ P NTRM+AAAYLAS+L+RA +LPL VV SS+ RLV+W + + D K
Sbjct: 376 LCETFVTRSIPSNTRMSAAAYLASYLARANFLPLPVVLSSVSRLVNWCVSFTPTRFDVFK 435
Query: 1425 TMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPS 1604
+ +H VFY+ACQA+MYILCFR+ L + QR CLPS
Sbjct: 436 LTDTALHGVFYAACQAVMYILCFRLRELYAESTQRPLLKGLRLQQLIEHKLCPLKVCLPS 495
Query: 1605 VVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDRFIR 1784
VV+EF RQ+ A+ + E S KS+GG RL+MFFPFDPYLL+RSDRFI
Sbjct: 496 VVEEFVRQATAIQLISYSGTVEPSSGFEVLSFKSYGGDNRLEMFFPFDPYLLRRSDRFIE 555
Query: 1785 PDFTFWTMVQVPIDEDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQ 1964
P FT W+ + +E S++E + ++V++ + + +
Sbjct: 556 PIFTHWSAA-----HSANEVEEQSSDEE-------------EPVVEEEEVLDPDDLMEAE 597
Query: 1965 DAQSDDEEMDAFELSMNRMSITPKKSFLRSMPAML 2069
+ DD +AF S+ MSITP + ++ ML
Sbjct: 598 EEGYDDGGEEAFRNSLECMSITPPRMLPANLAHML 632
>XP_002967968.1 hypothetical protein SELMODRAFT_440149 [Selaginella moellendorffii]
EFJ31315.1 hypothetical protein SELMODRAFT_440149
[Selaginella moellendorffii]
Length = 637
Score = 471 bits (1212), Expect = e-152
Identities = 278/643 (43%), Positives = 371/643 (57%), Gaps = 26/643 (4%)
Frame = +3
Query: 219 DSEILSAARLWIRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVS 398
D ++ R W+ +AL+ D Y +LL +LK+V+ DP+ ++ALSQ VS
Sbjct: 19 DKQLQEIVRSWMLQALSGE---DIDRYRKLLSDLKNVDFDDPESVSGLAARIRALSQCVS 75
Query: 399 SINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXX 578
INE H LLS + MSFW+ ++E+ D + +VNLA S+G V RCLDMLVRN
Sbjct: 76 IINERDHEMLLSLVFSMSFWSGSNELLDAIENLVVNLATSSGVLVPRCLDMLVRNFLPPS 135
Query: 579 XXXXXXXXXXTSKMMLVNKM--EQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALR 752
T + KM E + K HL+ K +V++RVHLA+Q+I E+VP AALR
Sbjct: 136 CGIKVHLDCYTQDRLARKKMTFESLKGLKPLHLSMKSDVVNRVHLALQRILELVPIAALR 195
Query: 753 LQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWE 932
L PI+ +RMPHR + +WN+L++ENML +++ + I SRML+ +VDRLIEIDVEI WE
Sbjct: 196 LHPIVQQRMPHRRVDKDWNSLFLENMLLLDSKRVSPAISSRMLLGIVDRLIEIDVEIAWE 255
Query: 933 DIGHD-DLSKVYIFDMEMDD----------DYETEHSGAPH--KEKLGDVADKMDVLMEL 1073
DI D D SKV +F M++D+ + + EH+ A H K+ L ++ADKMD LMEL
Sbjct: 256 DILKDEDSSKVLVFHMDVDESDDKQAAPGSEAQLEHALAAHSGKKPLDEIADKMDHLMEL 315
Query: 1074 TLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASM 1253
EHL CA+ RL +VY TLM SF++T+L+T+KSKFTQFLIFYLCSL+P CG FA
Sbjct: 316 VFEHLHQCAKNERLDEVYTTLMVSFKSTVLDTYKSKFTQFLIFYLCSLSPSSCGVNFAGF 375
Query: 1254 LCNVFVSSRAP-NTRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSN--DDRK 1424
LC FV+ P NTRM+AAAYLAS+L+RA +LPL VV SS+ RLV+W + + D K
Sbjct: 376 LCETFVTRSIPSNTRMSAAAYLASYLARANFLPLPVVLSSVSRLVNWCVSFTPTRFDVFK 435
Query: 1425 TMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPS 1604
+ +H VFY+ACQA+MYILCFR+ L D QR CLPS
Sbjct: 436 LTDTALHGVFYAACQAVMYILCFRLRELHADSTQRPLLKGLRLQQLIEHKLCPLKVCLPS 495
Query: 1605 VVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDRFIR 1784
VV+EF RQ+ A+ + E S KS+GG RL+MFFPFDPYLL+RSDRFI
Sbjct: 496 VVEEFVRQATAIQLISYSGTVEPSSGFEVLSFKSYGGDNRLEMFFPFDPYLLRRSDRFIE 555
Query: 1785 PDFTFWTMVQVPIDEDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQ 1964
P FT W+ + +E S++E + VVE V D
Sbjct: 556 PIFTHWSAA-----HSANEVEEQSSDEE-------------------EPVVEEEEVLDPD 591
Query: 1965 DAQSDDEE--------MDAFELSMNRMSITPKKSFLRSMPAML 2069
D +EE +AF S+ MSITP + ++ ML
Sbjct: 592 DLMEAEEEGYEHHDGGEEAFRNSLECMSITPPRMLPANLAQML 634
>XP_006483466.1 PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3-like [Citrus sinensis]
Length = 628
Score = 466 bits (1200), Expect = e-150
Identities = 282/640 (44%), Positives = 382/640 (59%), Gaps = 30/640 (4%)
Frame = +3
Query: 252 IRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLL 431
+R ALTSV GD YNQL+ + DPD +L+ALS AVS I+ HH SLL
Sbjct: 29 VREALTSVQSGDNDNYNQLVAVMHLSGRLDPDNRALLETSLKALSGAVSYIDISHHESLL 88
Query: 432 SWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXXT 611
I GMS WN++ +V D L I++LAASNG +VD CL MLV N T
Sbjct: 89 VSIFGMSMWNYDPDVMDALKGLIISLAASNGKYVDSCLTMLVSNF--------------T 134
Query: 612 SKMMLVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALRLQPIIIRRMP--- 782
++K+ K+ L RK +VL RVH A++ I ++VP A RL PI+++RMP
Sbjct: 135 PPSYFLDKL-----KEPHGLERKHQVLSRVHAALKSIFDLVPLAPTRLLPIVVQRMPTVH 189
Query: 783 HRYLALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKV 962
+++ L+ +Y ENML++E+SA+GE++ S +LMAVVDRLI++D+EI W+DI HDD SK
Sbjct: 190 NKHERLKMIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKG 249
Query: 963 YIFDMEMDDDYETEHSGAPHKEKLGD----------------VADKMDVLMELTLEHLKV 1094
IF+ME++D E A E++GD +A+ +D LM LT EHL+
Sbjct: 250 -IFEMELEDVEEA----ADDAEQVGDELPSGSLSRKSLSGNLIAELLDSLMVLTFEHLES 304
Query: 1095 CAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASMLCNVFVS 1274
C GRL +V++ L+ SFQ T+LN +KSKF QF++FY C+L PE CG +FA+ML +VFVS
Sbjct: 305 CEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVS 364
Query: 1275 SRAPN-TRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRV 1451
P TRM+A +YLASFLSRA++L + S +KRLVDW L+Y N +NPK HRV
Sbjct: 365 GLYPPLTRMSAVSYLASFLSRARFLSPCFIVSLLKRLVDWCLEYC-NILGGDINPKAHRV 423
Query: 1452 FYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPSVVQEFSRQS 1631
FYS CQAIMY+LCFRM ++D P+ + CLPSVV EF +QS
Sbjct: 424 FYSGCQAIMYVLCFRMRSIMDIPRLKSQLLLMPLETVLKHDLNPLKVCLPSVVSEFLQQS 483
Query: 1632 QAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDRFIRPDFTFWTMV 1811
+A +F + ++LESE S++FGG+ERLDMFFPFDP LLK+SD FIRP+F +W+MV
Sbjct: 484 KAARLFTVSETFVFNDLLESELSRAFGGLERLDMFFPFDPCLLKKSDSFIRPNFVYWSMV 543
Query: 1812 QVPIDEDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQDAQSDDEEM 1991
+ D E D S++++ + DN D V V D Q D ++
Sbjct: 544 KTAYHGD----EEDNSDEDV--------------DEDNGDHVMVDGVGRSPDEQ--DLDL 583
Query: 1992 DAFELSMNRMSITPKKSF-------LR---SMPAMLLPNM 2081
D FE S+N+MSITPK SF LR MP+ + P+M
Sbjct: 584 DEFEYSLNKMSITPKNSFSCRLDGELRQPMKMPSRIRPSM 623
>XP_001775034.1 predicted protein [Physcomitrella patens] EDQ60141.1 predicted
protein [Physcomitrella patens]
Length = 655
Score = 466 bits (1200), Expect = e-150
Identities = 247/538 (45%), Positives = 337/538 (62%), Gaps = 11/538 (2%)
Frame = +3
Query: 240 ARLWIRRALTSVLEG-DTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHH 416
AR W+ +AL S +G D YN L E L+ + + + ALSQ VS +NE
Sbjct: 4 ARAWVLKALKSGSDGVDKGHYNHLCEALRDPRLHGDEGAPELAVRINALSQCVSYLNERA 63
Query: 417 HGSLLSWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXX 596
H +LL ++LGMS W ++ EV D L+ F+VNL+ +NG FV CLDMLVRN
Sbjct: 64 HRTLLQYLLGMSVWTYSFEVVDALLAFVVNLSTANGCFVPDCLDMLVRNFLPPSCGLPSF 123
Query: 597 XXXX--TSKMMLVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALRLQPIII 770
T MM + M+++ + +R+H A+ Q E+VPTAA RLQ I++
Sbjct: 124 FDSFSRTGLMMGLTTMDKLKSQ------------ERLHSALVQTVELVPTAAFRLQHIVV 171
Query: 771 RRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHD- 947
+RMPHR +W LY+ENMLR+ENS++ ++G +ML +VDRLIEIDVEIRWEDI D
Sbjct: 172 QRMPHRTCDKQWLTLYVENMLRLENSSLSSVLGGQMLSLIVDRLIEIDVEIRWEDIMRDE 231
Query: 948 DLSKVYIFDMEMDDDYETEHSGAPHKEKLGDVADKMDVLMELTLEHLKVCAEEGRLQQVY 1127
D +KV++F M +DDD + L ++ADKMD++M++TL+HL C + G V+
Sbjct: 232 DSNKVFMFHMNLDDDEDFRSDLTGALPTLDEMADKMDLIMDMTLDHLHTCVQNGHGDLVF 291
Query: 1128 DTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASMLCNVF-VSSRAPNTRMTA 1304
+TLM SFQTTIL+T+KSKFTQFLIFYLCSLAPE CG+ FAS+LC++F +R PNTRM+A
Sbjct: 292 ETLMRSFQTTILDTYKSKFTQFLIFYLCSLAPETCGSTFASLLCDIFECKTRPPNTRMSA 351
Query: 1305 AAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVS------NDDRKTMNPKVHRVFYSAC 1466
AAYLAS+L+RA YLPL+VV S++RL+ W + Y N +++P +H VFY AC
Sbjct: 352 AAYLASYLARAAYLPLNVVMDSVRRLLHWCVSYAQLAEDRRNPTMTSVDPVLHGVFYCAC 411
Query: 1467 QAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPSVVQEFSRQSQAMHV 1646
QA+MY+LCFR+ L +D + + CLPSVV EF +Q+ +
Sbjct: 412 QAVMYVLCFRLKDLTEDQRLKRLLRNLPLQELVEHHLKPLTICLPSVVDEFVKQASIAQL 471
Query: 1647 FESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDRFIRPDFTFWTMVQVP 1820
+ S ++ S++ SFGG RLDMFFPFDPYLL++SDRFIRP F W MV++P
Sbjct: 472 VDCRQWSNIRDAAASQACGSFGGEGRLDMFFPFDPYLLRQSDRFIRPHFIHWAMVELP 529
>XP_006483559.1 PREDICTED: RNA polymerase I-specific transcription initiation factor
rrn3-like isoform X1 [Citrus sinensis]
Length = 628
Score = 461 bits (1186), Expect = e-148
Identities = 274/631 (43%), Positives = 377/631 (59%), Gaps = 20/631 (3%)
Frame = +3
Query: 252 IRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLL 431
+R ALTSV GD YNQL+ + DPD +L+ALS AVS I+ HH SLL
Sbjct: 29 VREALTSVQSGDNDNYNQLVAVMHLSGRLDPDNRALLETSLKALSGAVSYIDISHHESLL 88
Query: 432 SWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXXT 611
I GMS WN++ ++ D L I++LAAS+G +VD CL MLV N T
Sbjct: 89 VSIFGMSMWNYDPDIMDALKGLIISLAASSGKYVDSCLTMLVGNF--------------T 134
Query: 612 SKMMLVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALRLQPIIIRRMP--- 782
++K+ K+ L RK +VL RVH A++ I ++VP A +RL PI+++RMP
Sbjct: 135 PPSYFLDKL-----KEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVH 189
Query: 783 HRYLALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKV 962
+++ L+ +Y ENML++E+SA+GE++ S +LMAVVDRLI++D+EI W+DI HDD SK
Sbjct: 190 NKHERLKLIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKG 249
Query: 963 YIFDMEMDDDYETEHSGAPHKEKLGD----------------VADKMDVLMELTLEHLKV 1094
IF+ME++D E A E++GD +A+ +D L+ LT EHL+
Sbjct: 250 -IFEMELEDVEEA----ADDAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTFEHLES 304
Query: 1095 CAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASMLCNVFVS 1274
C GRL +V++ L+ SFQ T+LN +KSKF QF++FY C+L PE CG +FA+ML +VFVS
Sbjct: 305 CEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLADVFVS 364
Query: 1275 SRAPN-TRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRV 1451
P TRM++ +YLAS+LSRA++L + S +KRLVDW L+Y N +NPK HRV
Sbjct: 365 GLYPPLTRMSSVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEYC-NIPGGNINPKAHRV 423
Query: 1452 FYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPSVVQEFSRQS 1631
FYS CQAIMY+LCFRM ++D P+ + CLPSVV EF +QS
Sbjct: 424 FYSGCQAIMYVLCFRMRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSEFLQQS 483
Query: 1632 QAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDRFIRPDFTFWTMV 1811
+A +F I ++LESE S+ FGG+ERLDMFFPFDP LLK+SD FIRP+F +W+MV
Sbjct: 484 KAARLFTVSETFIFNDLLESELSRDFGGLERLDMFFPFDPCLLKKSDSFIRPNFIYWSMV 543
Query: 1812 QVPIDEDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQDAQSDDEEM 1991
+ D E D S++++ + DN D V + D Q D ++
Sbjct: 544 KTAYHGD----EEDNSDEDV--------------DEDNGDHVMVDGMGRSPDEQ--DLDL 583
Query: 1992 DAFELSMNRMSITPKKSFLRSMPAMLLPNMK 2084
D FE S+N+MSITPK SF + L MK
Sbjct: 584 DEFEYSLNKMSITPKNSFSCRLDGELRQPMK 614
>XP_016742241.1 PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3-like isoform X1 [Gossypium hirsutum] XP_016742242.1
PREDICTED: RNA polymerase I-specific transcription
initiation factor RRN3-like isoform X1 [Gossypium
hirsutum] XP_016742243.1 PREDICTED: RNA polymerase
I-specific transcription initiation factor RRN3-like
isoform X1 [Gossypium hirsutum] XP_016742244.1 PREDICTED:
RNA polymerase I-specific transcription initiation factor
RRN3-like isoform X1 [Gossypium hirsutum] XP_016742245.1
PREDICTED: RNA polymerase I-specific transcription
initiation factor RRN3-like isoform X1 [Gossypium
hirsutum] XP_016742246.1 PREDICTED: RNA polymerase
I-specific transcription initiation factor RRN3-like
isoform X1 [Gossypium hirsutum] XP_016742247.1 PREDICTED:
RNA polymerase I-specific transcription initiation factor
RRN3-like isoform X1 [Gossypium hirsutum] XP_017645736.1
PREDICTED: RNA polymerase I-specific transcription
initiation factor RRN3 isoform X1 [Gossypium arboreum]
XP_017645737.1 PREDICTED: RNA polymerase I-specific
transcription initiation factor RRN3 isoform X1
[Gossypium arboreum] XP_017645738.1 PREDICTED: RNA
polymerase I-specific transcription initiation factor
RRN3 isoform X1 [Gossypium arboreum] XP_017645739.1
PREDICTED: RNA polymerase I-specific transcription
initiation factor RRN3 isoform X1 [Gossypium arboreum]
XP_017645740.1 PREDICTED: RNA polymerase I-specific
transcription initiation factor RRN3 isoform X1
[Gossypium arboreum] XP_017645741.1 PREDICTED: RNA
polymerase I-specific transcription initiation factor
RRN3 isoform X1 [Gossypium arboreum]
Length = 629
Score = 461 bits (1185), Expect = e-148
Identities = 280/639 (43%), Positives = 382/639 (59%), Gaps = 14/639 (2%)
Frame = +3
Query: 162 MEIQTANYDNMKSSQAFRM-DSEILSAARLWIRRALTSVLEGDTTFYNQLLEELKSVEAG 338
M ++ Y M+ Q F DSEI+S +++AL SVL GD YNQL+ + +
Sbjct: 1 MGLELPKYPEMEEDQVFNFTDSEIVSH----VKQALASVLSGDNNSYNQLVGVMHHSKHL 56
Query: 339 DPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAAS 518
PD+ TL+AL+ AVSSI+ +H SLLS I MS WN+ VAD L E IV+LA S
Sbjct: 57 APDEVALLETTLKALAGAVSSIDITYHDSLLSAIFCMSMWNYGPHVADALAELIVSLAIS 116
Query: 519 NGAFVDRCLDMLVRNXXXXXXXXXXXXXXXTSKMMLVNKMEQILQKKTEHLARKKEVLDR 698
NG ++D CL MLV N T ++K+ K L RK +VL R
Sbjct: 117 NGKYLDLCLGMLVSNF--------------TPPPYFLDKL-----KMPHGLERKGQVLSR 157
Query: 699 VHLAIQQIAEIVPTAALRLQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRM 878
VH A ++IA+ VP A LRL I+++ MP Y +Y+ENML++E+ IGE++GS +
Sbjct: 158 VHAAFKKIADYVPLAPLRLLTIVLQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTI 217
Query: 879 LMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYETEHSGAP--------HKEKL 1034
LMAVVDRLIE+DVEI W+ I DD SK IF+ME++D + E S P K
Sbjct: 218 LMAVVDRLIELDVEIGWDAILQDDFSK-GIFEMELEDVDDIEESAEPDVGEFRLSRKSLA 276
Query: 1035 GD-VADKMDVLMELTLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLC 1211
G+ +A+ +D L+ LT EHL+ C EGRL +V++TL+ SFQ T+L+ +KSKF QF++FY C
Sbjct: 277 GNSIAELLDNLLVLTFEHLESCEREGRLAKVFETLLQSFQVTVLSAYKSKFAQFVMFYAC 336
Query: 1212 SLAPEICGAQFASMLCNVFVSSRAPN-TRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVD 1388
+L PE CG +FA+ML ++FV P TRM+A +YLAS+LSRAK+L S +SS +KRLVD
Sbjct: 337 ALDPENCGMRFATMLADLFVQDSQPQPTRMSAVSYLASYLSRAKFLAASSISSMLKRLVD 396
Query: 1389 WSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXX 1568
W L+Y D +NP HRVFYS CQAIMY+LCFRM + +D P+ +
Sbjct: 397 WCLEYCEAHD-GDINPNAHRVFYSGCQAIMYVLCFRMKVFVDVPRLK-SELLIPLEQVLK 454
Query: 1569 XXXXXXXXCLPSVVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFD 1748
CLPSVV+EF RQ++A +F I +LESE S++FGG+ERLD FFPFD
Sbjct: 455 HKLNPLKVCLPSVVEEFLRQAKAASLFTVCKTFIFDGLLESELSRAFGGLERLDTFFPFD 514
Query: 1749 PYLLKRSDRFIRPDFTFWTMVQVPIDEDC-DNIEVDGSEDEMLXXXXXXXXXXXXREFDN 1925
P LLK+ D FIRP F FW+MV+ D+ D+ + DGS D+ L +N
Sbjct: 515 PCLLKKCDSFIRPMFVFWSMVKPTYDDAFDDDDDDDGSSDDDLVQDFVN---------EN 565
Query: 1926 QDVVEYLSVNDFQDAQSDDE--EMDAFELSMNRMSITPK 2036
+D+ +ND D++ +MD F+ ++ +MSITPK
Sbjct: 566 EDI-----MNDEFGKSFDEQGVDMDDFDYALKKMSITPK 599
>XP_016739728.1 PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3-like [Gossypium hirsutum] XP_016739729.1 PREDICTED:
RNA polymerase I-specific transcription initiation factor
RRN3-like [Gossypium hirsutum]
Length = 629
Score = 461 bits (1185), Expect = e-148
Identities = 279/639 (43%), Positives = 383/639 (59%), Gaps = 14/639 (2%)
Frame = +3
Query: 162 MEIQTANYDNMKSSQAFRM-DSEILSAARLWIRRALTSVLEGDTTFYNQLLEELKSVEAG 338
M ++ Y +++ Q F DSEI+S +++AL SVL GD YNQL+ + +
Sbjct: 1 MGLELPKYPELEADQVFNFTDSEIVSH----VKQALASVLSGDNNSYNQLVGVMHHSKHL 56
Query: 339 DPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAAS 518
PD+ TL+AL+ AVSSI+ HH SLLS I MS WN+ VAD L E IV+LA S
Sbjct: 57 APDEVALLETTLKALAGAVSSIDITHHDSLLSAIFCMSMWNYGPHVADALAELIVSLAIS 116
Query: 519 NGAFVDRCLDMLVRNXXXXXXXXXXXXXXXTSKMMLVNKMEQILQKKTEHLARKKEVLDR 698
NG ++D CL MLV N T ++K+ K L RK +VL R
Sbjct: 117 NGKYLDLCLGMLVSNF--------------TPPPYFLDKL-----KMPHGLERKGQVLSR 157
Query: 699 VHLAIQQIAEIVPTAALRLQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRM 878
VH A ++IA+ VP A LRL I+++ MP Y +Y+ENML++E+ IGE++GS +
Sbjct: 158 VHAAFKKIADYVPLAPLRLLTIVLQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTI 217
Query: 879 LMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYETEHSGAP--------HKEKL 1034
LMAVVDRLIE+DVEI W+ I DD SK IF+ME++D + E S P K
Sbjct: 218 LMAVVDRLIELDVEIGWDAILQDDFSK-GIFEMELEDVDDIEESAEPDVGEFRLSRKSLA 276
Query: 1035 GD-VADKMDVLMELTLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLC 1211
G+ +A+ +D L+ LT EHL+ C EGRL +V++TL+ SF+ T+L+ +KSKF QF++FY C
Sbjct: 277 GNSIAELLDNLLVLTFEHLESCEREGRLAKVFETLLQSFRVTVLSAYKSKFAQFVMFYAC 336
Query: 1212 SLAPEICGAQFASMLCNVFVSSRAPN-TRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVD 1388
+L PE CG +FA+ML ++FV P TRM+A +YLAS+LSRAK+L S +SS +KRLVD
Sbjct: 337 ALDPENCGMRFATMLADLFVQDSQPQPTRMSAVSYLASYLSRAKFLAASSISSMLKRLVD 396
Query: 1389 WSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXX 1568
W L+Y D +NP HRVFYS CQAIMY+LCFRM + +D P+ +
Sbjct: 397 WCLEYCEAHD-GDINPNAHRVFYSGCQAIMYVLCFRMKVFVDVPRLK-SELLIPLEQVLK 454
Query: 1569 XXXXXXXXCLPSVVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFD 1748
CLPSVV+EF RQ++A +F I +LESE S++FGG+ERLD FFPFD
Sbjct: 455 HKLNPLKVCLPSVVEEFLRQAKAASLFTVCKTFIFDGLLESELSRAFGGLERLDTFFPFD 514
Query: 1749 PYLLKRSDRFIRPDFTFWTMVQVPIDEDC-DNIEVDGSEDEMLXXXXXXXXXXXXREFDN 1925
P LLK+ D FIRP F FW+MV+ D+ D+ + DGS D+ L +N
Sbjct: 515 PCLLKKCDSFIRPMFVFWSMVKPTYDDAFDDDDDDDGSSDDDLVQDFVN---------EN 565
Query: 1926 QDVVEYLSVNDFQDAQSDDE--EMDAFELSMNRMSITPK 2036
+D+ +ND D++ +MD F+ ++ +MSITPK
Sbjct: 566 EDI-----MNDEFGKSFDEQGVDMDDFDYALKKMSITPK 599
>XP_012470198.1 PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3 [Gossypium raimondii] XP_012470199.1 PREDICTED: RNA
polymerase I-specific transcription initiation factor
RRN3 [Gossypium raimondii] XP_012470200.1 PREDICTED: RNA
polymerase I-specific transcription initiation factor
RRN3 [Gossypium raimondii] XP_012470201.1 PREDICTED: RNA
polymerase I-specific transcription initiation factor
RRN3 [Gossypium raimondii] XP_012470202.1 PREDICTED: RNA
polymerase I-specific transcription initiation factor
RRN3 [Gossypium raimondii] KJB18645.1 hypothetical
protein B456_003G064600 [Gossypium raimondii] KJB18646.1
hypothetical protein B456_003G064600 [Gossypium
raimondii]
Length = 629
Score = 460 bits (1183), Expect = e-148
Identities = 279/639 (43%), Positives = 382/639 (59%), Gaps = 14/639 (2%)
Frame = +3
Query: 162 MEIQTANYDNMKSSQAFRM-DSEILSAARLWIRRALTSVLEGDTTFYNQLLEELKSVEAG 338
M ++ Y M+ Q F DSEI+S +++AL SVL GD YNQL+ + +
Sbjct: 1 MGLELPKYPEMEEDQVFNFTDSEIVSH----VKQALASVLSGDNNSYNQLVGVMHHSKHL 56
Query: 339 DPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAAS 518
PD+ TL+AL+ AVSSI+ HH SLLS I MS WN+ VAD L E IV+LA S
Sbjct: 57 APDEVALLETTLKALAGAVSSIDITHHDSLLSAIYCMSMWNYGPHVADALAELIVSLAIS 116
Query: 519 NGAFVDRCLDMLVRNXXXXXXXXXXXXXXXTSKMMLVNKMEQILQKKTEHLARKKEVLDR 698
NG ++D CL MLV N T ++K+ K L RK +VL R
Sbjct: 117 NGKYLDLCLGMLVSNF--------------TPPPYFLDKL-----KMPHGLERKGQVLSR 157
Query: 699 VHLAIQQIAEIVPTAALRLQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRM 878
VH A ++IA+ VP A LRL I+++ MP Y +Y+ENML++E+ IGE++GS +
Sbjct: 158 VHAAFKKIADYVPLAPLRLLTIVLQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTI 217
Query: 879 LMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYETEHSGAP--------HKEKL 1034
LMAVVDRLIE+DVEI W+ I DD SK IF+ME++D + E S P K
Sbjct: 218 LMAVVDRLIELDVEIGWDAILQDDFSK-GIFEMELEDVDDIEESAEPDVGEFRLSRKSLA 276
Query: 1035 GD-VADKMDVLMELTLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLC 1211
G+ +A+ +D L+ LT EHL+ C EGRL +V++TL+ SF+ T+L+ +KSKF QF++FY C
Sbjct: 277 GNSIAELLDNLLVLTFEHLESCEREGRLAKVFETLLQSFRVTVLSAYKSKFAQFVMFYAC 336
Query: 1212 SLAPEICGAQFASMLCNVFVSSRAPN-TRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVD 1388
+L PE CG +FA++L ++FV P TRM+A +YLAS+LSRAK+L S +SS +KRLVD
Sbjct: 337 ALDPENCGMRFATVLADLFVQDSQPQPTRMSAVSYLASYLSRAKFLAASSISSMLKRLVD 396
Query: 1389 WSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXX 1568
W L+Y D +NP HRVFYS CQAIMY+LCFRM + +D P+ +
Sbjct: 397 WCLEYCEAHD-GDINPNAHRVFYSGCQAIMYVLCFRMKVFVDVPRLK-SELLIPLEQVLK 454
Query: 1569 XXXXXXXXCLPSVVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFD 1748
CLPSVV+EF RQ++A +F I +LESE S++FGG+ERLD FFPFD
Sbjct: 455 HKLNPLKVCLPSVVEEFLRQAKAASLFTVCKTFIFDGLLESELSRAFGGLERLDTFFPFD 514
Query: 1749 PYLLKRSDRFIRPDFTFWTMVQVPIDEDC-DNIEVDGSEDEMLXXXXXXXXXXXXREFDN 1925
P LLK+ D FIRP F FW+MV+ D+ D+ + DGS D+ L +N
Sbjct: 515 PCLLKKCDSFIRPMFVFWSMVKPTYDDAFDDDDDDDGSSDDDLVQDFVN---------EN 565
Query: 1926 QDVVEYLSVNDFQDAQSDDE--EMDAFELSMNRMSITPK 2036
+D+ +ND D++ +MD F+ ++ +MSITPK
Sbjct: 566 EDI-----MNDEFGKSFDEQGVDMDEFDYALKKMSITPK 599
>XP_010033606.1 PREDICTED: RNA polymerase I-specific transcription initiation factor
rrn3 [Eucalyptus grandis] KCW53302.1 hypothetical protein
EUGRSUZ_J02557 [Eucalyptus grandis]
Length = 633
Score = 458 bits (1178), Expect = e-147
Identities = 262/615 (42%), Positives = 373/615 (60%), Gaps = 18/615 (2%)
Frame = +3
Query: 252 IRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLL 431
+R AL SV GD+ Y++L+ + E PD+ + L+ALS VS I+ HH SLL
Sbjct: 29 VRTALKSVSLGDSESYDELIGVMHHRERLSPDEVALLVTCLKALSGTVSCIDVVHHESLL 88
Query: 432 SWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXXT 611
S I GMS WN+ EV D L++ I++LAAS+G +VD CLDML+RN
Sbjct: 89 SSIFGMSMWNYGPEVMDALVDLIISLAASSGKYVDSCLDMLIRNFVPPYSYL-------- 140
Query: 612 SKMMLVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALRLQPIIIRRMPHRY 791
L K+ L+RK +VL RVH A++ I +VP A +RL ++++RMP +Y
Sbjct: 141 -----------ALLKQPRGLSRKDQVLSRVHSALESIGHLVPLAPMRLLSLVVQRMPRQY 189
Query: 792 LALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIF 971
Y+ENM ++E+ ++G+++GS ML AVVDRL+++D+EI WEDI +D SK IF
Sbjct: 190 DNEAVIMTYVENMFKLESGSMGQLVGSTMLTAVVDRLLDLDLEIGWEDILQEDSSK-GIF 248
Query: 972 DMEMDD------DYETEHSGAPHKE------KLGDVADKMDVLMELTLEHLKVCAEEGRL 1115
+ME++D D+ E P K + +A+K+D L+ LT E+L+ C GRL
Sbjct: 249 EMELEDLEEDEEDWNDEGGELPGKHLSRNSLRGNIIAEKLDSLLVLTFEYLESCQGRGRL 308
Query: 1116 QQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASMLCNVFV-SSRAPNT 1292
+V++TL+HSF+ T+LN +KSKF+QF++FY C+L PE CG +FA ML ++FV PNT
Sbjct: 309 LEVFETLLHSFRITVLNAYKSKFSQFVMFYACALDPENCGVRFARMLLDIFVCHDHPPNT 368
Query: 1293 RMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQA 1472
RM+A AYLAS+LSR K+L S +++ +KRLVDW L Y D + +NP HRVFY+ CQA
Sbjct: 369 RMSAVAYLASYLSRGKFLSTSYITTMLKRLVDWCLDYCKVQD-EDVNPLAHRVFYAGCQA 427
Query: 1473 IMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPSVVQEFSRQSQAMHVFE 1652
IMY+LCFRM ++ P+ + CLPSVV EF +Q++A +F
Sbjct: 428 IMYVLCFRMWSMMSIPRLKSQLFLMPIETILKHKSDPLKVCLPSVVGEFLKQARAARLFT 487
Query: 1653 SLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDRFIRPDFTFWTMVQVPIDED 1832
SI+ ++LE+E S++FGG+ERLD FFPFDP LLK+SDRFIRP+F FW+MV+ D+D
Sbjct: 488 VSKTSISDDILETELSRAFGGLERLDTFFPFDPCLLKKSDRFIRPNFIFWSMVKTTYDDD 547
Query: 1833 CDNIE-VDGSEDEMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQD-AQSDDE---EMDA 1997
D E +GS DE D ++ V+ N A S DE +M+
Sbjct: 548 EDEDEDAEGSSDE-----------------DGEESVDGAVENRGDGMATSFDERDIDMEE 590
Query: 1998 FELSMNRMSITPKKS 2042
F+ ++N+MSITPK+S
Sbjct: 591 FDYALNKMSITPKQS 605
>XP_010649342.1 PREDICTED: RNA polymerase I-specific transcription initiation factor
rrn3 [Vitis vinifera]
Length = 627
Score = 457 bits (1175), Expect = e-147
Identities = 266/611 (43%), Positives = 371/611 (60%), Gaps = 14/611 (2%)
Frame = +3
Query: 252 IRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLL 431
+R AL SV GD+ Y+QL+ L E PD+ + +L+ALS AVS I+ HH SLL
Sbjct: 29 VRHALQSVPLGDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLL 88
Query: 432 SWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXXT 611
S I GMS WN+ +V D L+E I++LAAS+G ++D LDMLV N
Sbjct: 89 SSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSN---------------- 132
Query: 612 SKMMLVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALRLQPIIIRRMPHRY 791
M + L K+ LARK +VL RVH ++ IA++VP A RL PI+I+RMP+ +
Sbjct: 133 --FMPPYSLLDFL-KQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVPIVIQRMPNVF 189
Query: 792 LALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYIF 971
+Y+ENMLR+E AI E++G+ ML+A++DRL+++DVEI WE++ DD SK IF
Sbjct: 190 TKEPLIMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKG-IF 248
Query: 972 DMEMDD------DYETE----HSGAPHKEKLGD--VADKMDVLMELTLEHLKVCAEEGRL 1115
+ME++D D E + H G+ ++ LG +A+K+D LM LT EHL+ C GRL
Sbjct: 249 EMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRL 308
Query: 1116 QQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASMLCNVFVSSRAPN-T 1292
+V++TL+ SFQTT+LN KSKF QF++FY C+L PE CG +FA +L + FV S P
Sbjct: 309 IEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLN 368
Query: 1293 RMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQA 1472
RM+A AYLAS+LSR K+L S V++ ++RLV W L+Y D +NPK H+VFYS CQA
Sbjct: 369 RMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIHDGD-INPKAHQVFYSGCQA 427
Query: 1473 IMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPSVVQEFSRQSQAMHVFE 1652
IMY+LCFRM +++ P R CLPS+V+EF RQ++A +F
Sbjct: 428 IMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFT 487
Query: 1653 SLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDRFIRPDFTFWTMVQVPIDED 1832
I ++LESE S++FGG+ERLDMFFPFDP LLK+ DRFIRP+F +W+M++ D+
Sbjct: 488 VSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTYDDG 547
Query: 1833 CDNIEVDGSED-EMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQDAQSDDEEMDAFELS 2009
D+ + + +ED E R +D+ D+ E+D F+ S
Sbjct: 548 EDSSDEEPAEDYEASHPDDVMNDDAMARSYDSHDL-----------------ELDEFDHS 590
Query: 2010 MNRMSITPKKS 2042
MN+MSITPK S
Sbjct: 591 MNKMSITPKNS 601
>OAY37304.1 hypothetical protein MANES_11G091200 [Manihot esculenta]
Length = 639
Score = 456 bits (1172), Expect = e-146
Identities = 277/623 (44%), Positives = 380/623 (60%), Gaps = 28/623 (4%)
Frame = +3
Query: 252 IRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLL 431
+R AL SV GD+ Y+QL+ + + PD+ + +L+ALS AVS I+ HH SLL
Sbjct: 30 VRDALISVQSGDSDSYHQLVGVMHHSQRLAPDEVALLVTSLKALSGAVSYIDSIHHDSLL 89
Query: 432 SWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXXT 611
+ I GMS WN+ S+V D L+E I++LAASNG +VD CLDMLV N
Sbjct: 90 NSIFGMSMWNYGSDVMDALLELIISLAASNGKYVDSCLDMLVGNF--------------- 134
Query: 612 SKMMLVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALRLQPIIIRRMPHRY 791
M + ME + Q + + +K++VL RVH A++ IA +VP AALRL I++ RMP +
Sbjct: 135 --MPPMYFMEALKQPRGQ--TKKEQVLSRVHTALEDIAALVPMAALRLSSIVVHRMPPTF 190
Query: 792 L-ALEWNAL------YIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDD 950
+LE N L ++ENMLR+E+ AI E IGSRM+MAVVD LIE+DV I W+DI DD
Sbjct: 191 KKSLEKNRLKYRTEIFVENMLRLESGAIREFIGSRMIMAVVDMLIELDVSIGWDDILRDD 250
Query: 951 LSKVYIFDMEM---------DDDYETEHSGAP----HKEKLGD--VADKMDVLMELTLEH 1085
SK IF +E+ DDD E+ P HK +LG VAD +D LM EH
Sbjct: 251 SSKG-IFTIELEDVDDIASDDDDDNEENDELPATLSHK-RLGKNIVADLLDSLMVKIFEH 308
Query: 1086 LKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASMLCNV 1265
L+ CA RL +V++TL+ SF TILNT+KSKF QF++FY C+L PE CG +FA ML +
Sbjct: 309 LEFCANNKRLSEVFETLLDSFMLTILNTYKSKFAQFVMFYACALDPENCGEKFAKMLVDR 368
Query: 1266 FVSSRAPNTRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVH 1445
FV P TRM+A AYLAS+L+RAK+L ++ VS+++KRLVDW L+Y D + +NPK H
Sbjct: 369 FVYGDNPLTRMSAVAYLASYLARAKFLSVAFVSTTLKRLVDWCLEYCKIQDGE-INPKAH 427
Query: 1446 RVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPSVVQEFSR 1625
RVFYS CQAIMY+LCF M ++D P + CLPS+V+EF +
Sbjct: 428 RVFYSGCQAIMYVLCFCMRSIMDVPWLKSQLLLMPIEQILKHKLGPLKVCLPSIVEEFLK 487
Query: 1626 QSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDR-FIRPDFTFW 1802
Q++A H+F + I +++LES+ S+ FGG+ERLDMFFPFDP LLK+ DR FIRP+F +W
Sbjct: 488 QAKAAHLFTTSETFIFEDLLESDFSRDFGGLERLDMFFPFDPCLLKKCDRNFIRPNFVYW 547
Query: 1803 TMVQVPIDEDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQD--AQS 1976
V+ D + E D S++++ N+D V + ++ A+S
Sbjct: 548 KNVKTTYASDDE--EEDSSDEDI-----------------NEDFVPMNGESFMEEVVAKS 588
Query: 1977 DDEEM---DAFELSMNRMSITPK 2036
DE++ D F+ +MN+MSITPK
Sbjct: 589 ADEQLLDIDEFDYAMNKMSITPK 611
>EOX90600.1 Major facilitator superfamily protein isoform 1 [Theobroma cacao]
EOX90601.1 Major facilitator superfamily protein isoform
1 [Theobroma cacao] EOX90602.1 Major facilitator
superfamily protein isoform 1 [Theobroma cacao]
Length = 628
Score = 454 bits (1167), Expect = e-145
Identities = 272/639 (42%), Positives = 374/639 (58%), Gaps = 11/639 (1%)
Frame = +3
Query: 162 MEIQTANYDNMKSSQAFRM-DSEILSAARLWIRRALTSVLEGDTTFYNQLLEELKSVEAG 338
M ++ Y M+ DSEI+S ++ ALTSVL GD+ YNQL+ + +
Sbjct: 1 MGLELPKYPEMEEDNFVNFTDSEIVSH----VKDALTSVLSGDSNSYNQLVAVMHHSKRL 56
Query: 339 DPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAAS 518
PD+ TL+AL AVS I+ H SLLS I MS WN+ VAD L E IV+LA S
Sbjct: 57 APDEVALLETTLKALGGAVSCIDTTLHDSLLSAIFSMSMWNYGPHVADALAELIVSLAIS 116
Query: 519 NGAFVDRCLDMLVRNXXXXXXXXXXXXXXXTSKMMLVNKMEQILQKKTEHLARKKEVLDR 698
NG ++D CL MLV N T ++K+ K L RK +VL
Sbjct: 117 NGKYLDLCLGMLVSNF--------------TPPPYFLDKL-----KLPRGLERKGQVLSL 157
Query: 699 VHLAIQQIAEIVPTAALRLQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRM 878
VH A ++I++ +P A LRL I+++ MP Y +Y+ENML++E+ IGE++GS M
Sbjct: 158 VHAAFKKISDYIPLAPLRLSNIVLQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTM 217
Query: 879 LMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYETEHSGAP--------HKEKL 1034
LMAVVD+LIE+D+EI W+ I DD SK IF+ME++D E E S K
Sbjct: 218 LMAVVDQLIELDLEIGWDAILQDDFSKG-IFEMELEDVDEVEESAEQDTGEFRLSRKSLA 276
Query: 1035 GD-VADKMDVLMELTLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLC 1211
G+ +A+ +D L+ LT EHL+ C GRL +V++TL+ SFQ T+++ +KSKFTQF++FY C
Sbjct: 277 GNSIAELLDNLLVLTFEHLESCERAGRLAKVFETLLQSFQITVMSAYKSKFTQFVMFYAC 336
Query: 1212 SLAPEICGAQFASMLCNVFVSSRAPNT-RMTAAAYLASFLSRAKYLPLSVVSSSIKRLVD 1388
+L P+ CG +FA+ML ++FV P RM+A AYLAS+LSRAK+L S++SS +KRLVD
Sbjct: 337 ALDPDYCGMRFATMLADLFVQDSHPQPIRMSAVAYLASYLSRAKFLSASLISSMLKRLVD 396
Query: 1389 WSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXX 1568
W L+Y D +NP HRVFYS CQAIMY+LCFRM + +D P+ +
Sbjct: 397 WCLEYGKTPDGD-INPNAHRVFYSGCQAIMYVLCFRMKVFMDVPRLKMQLLMPMEQILKH 455
Query: 1569 XXXXXXXXCLPSVVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFD 1748
CLPSVV+EF RQS+A +F + +LESE S++FGG+ERLD FFPFD
Sbjct: 456 KLNPLKV-CLPSVVEEFLRQSKAACLFTVSKTFVFDGLLESELSRAFGGLERLDTFFPFD 514
Query: 1749 PYLLKRSDRFIRPDFTFWTMVQVPIDEDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQ 1928
P LLKR D FIRP F FW+MV+ D+ D+ DGS D+ L +N+
Sbjct: 515 PCLLKRCDSFIRPMFVFWSMVKPTYDDAYDDDNDDGSSDDELIQDFVN---------ENE 565
Query: 1929 DVVEYLSVNDFQDAQSDDEEMDAFELSMNRMSITPKKSF 2045
D+++ F + D +D F+ ++ +MSITPK F
Sbjct: 566 DIMDDGVARSFDEQGLD---LDEFDCALKKMSITPKNGF 601
>KCW53301.1 hypothetical protein EUGRSUZ_J02557 [Eucalyptus grandis]
Length = 634
Score = 453 bits (1166), Expect = e-145
Identities = 262/616 (42%), Positives = 373/616 (60%), Gaps = 19/616 (3%)
Frame = +3
Query: 252 IRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLL 431
+R AL SV GD+ Y++L+ + E PD+ + L+ALS VS I+ HH SLL
Sbjct: 29 VRTALKSVSLGDSESYDELIGVMHHRERLSPDEVALLVTCLKALSGTVSCIDVVHHESLL 88
Query: 432 SWILGMSFWNFNSEVADGLMEFIVNL-AASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXX 608
S I GMS WN+ EV D L++ I++L AAS+G +VD CLDML+RN
Sbjct: 89 SSIFGMSMWNYGPEVMDALVDLIISLQAASSGKYVDSCLDMLIRNFVPPYSYL------- 141
Query: 609 TSKMMLVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALRLQPIIIRRMPHR 788
L K+ L+RK +VL RVH A++ I +VP A +RL ++++RMP +
Sbjct: 142 ------------ALLKQPRGLSRKDQVLSRVHSALESIGHLVPLAPMRLLSLVVQRMPRQ 189
Query: 789 YLALEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDDLSKVYI 968
Y Y+ENM ++E+ ++G+++GS ML AVVDRL+++D+EI WEDI +D SK I
Sbjct: 190 YDNEAVIMTYVENMFKLESGSMGQLVGSTMLTAVVDRLLDLDLEIGWEDILQEDSSK-GI 248
Query: 969 FDMEMDD------DYETEHSGAPHKE------KLGDVADKMDVLMELTLEHLKVCAEEGR 1112
F+ME++D D+ E P K + +A+K+D L+ LT E+L+ C GR
Sbjct: 249 FEMELEDLEEDEEDWNDEGGELPGKHLSRNSLRGNIIAEKLDSLLVLTFEYLESCQGRGR 308
Query: 1113 LQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASMLCNVFV-SSRAPN 1289
L +V++TL+HSF+ T+LN +KSKF+QF++FY C+L PE CG +FA ML ++FV PN
Sbjct: 309 LLEVFETLLHSFRITVLNAYKSKFSQFVMFYACALDPENCGVRFARMLLDIFVCHDHPPN 368
Query: 1290 TRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYSACQ 1469
TRM+A AYLAS+LSR K+L S +++ +KRLVDW L Y D + +NP HRVFY+ CQ
Sbjct: 369 TRMSAVAYLASYLSRGKFLSTSYITTMLKRLVDWCLDYCKVQD-EDVNPLAHRVFYAGCQ 427
Query: 1470 AIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPSVVQEFSRQSQAMHVF 1649
AIMY+LCFRM ++ P+ + CLPSVV EF +Q++A +F
Sbjct: 428 AIMYVLCFRMWSMMSIPRLKSQLFLMPIETILKHKSDPLKVCLPSVVGEFLKQARAARLF 487
Query: 1650 ESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDRFIRPDFTFWTMVQVPIDE 1829
SI+ ++LE+E S++FGG+ERLD FFPFDP LLK+SDRFIRP+F FW+MV+ D+
Sbjct: 488 TVSKTSISDDILETELSRAFGGLERLDTFFPFDPCLLKKSDRFIRPNFIFWSMVKTTYDD 547
Query: 1830 DCDNIE-VDGSEDEMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQD-AQSDDE---EMD 1994
D D E +GS DE D ++ V+ N A S DE +M+
Sbjct: 548 DEDEDEDAEGSSDE-----------------DGEESVDGAVENRGDGMATSFDERDIDME 590
Query: 1995 AFELSMNRMSITPKKS 2042
F+ ++N+MSITPK+S
Sbjct: 591 EFDYALNKMSITPKQS 606
>XP_007046444.2 PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3 [Theobroma cacao] XP_017969452.1 PREDICTED: RNA
polymerase I-specific transcription initiation factor
RRN3 [Theobroma cacao] XP_017969453.1 PREDICTED: RNA
polymerase I-specific transcription initiation factor
RRN3 [Theobroma cacao]
Length = 628
Score = 449 bits (1156), Expect = e-144
Identities = 271/639 (42%), Positives = 372/639 (58%), Gaps = 11/639 (1%)
Frame = +3
Query: 162 MEIQTANYDNMKSSQAFRM-DSEILSAARLWIRRALTSVLEGDTTFYNQLLEELKSVEAG 338
M ++ Y M+ DSEI+S ++ ALTSVL GD+ YNQL+ + +
Sbjct: 1 MGLELPKYPEMEEDNFVNFTDSEIVSH----VKDALTSVLSGDSNSYNQLVAVMHHSKRL 56
Query: 339 DPDKEKTFLMTLQALSQAVSSINEHHHGSLLSWILGMSFWNFNSEVADGLMEFIVNLAAS 518
PD+ TL+AL AVS I+ H SLLS I MS WN+ VAD L E IV+LA S
Sbjct: 57 APDEVALLETTLKALGGAVSCIDTTLHDSLLSAIFSMSMWNYGPHVADALAELIVSLAIS 116
Query: 519 NGAFVDRCLDMLVRNXXXXXXXXXXXXXXXTSKMMLVNKMEQILQKKTEHLARKKEVLDR 698
NG ++D CL MLV N T ++K+ K L RK +VL
Sbjct: 117 NGKYLDLCLGMLVSNF--------------TPPPYFLDKL-----KLPRGLERKGQVLSL 157
Query: 699 VHLAIQQIAEIVPTAALRLQPIIIRRMPHRYLALEWNALYIENMLRIENSAIGEIIGSRM 878
VH A ++I++ +P A LRL I+++ MP Y +Y+ENML++E+ IGE++GS M
Sbjct: 158 VHAAFKKISDYIPLAPLRLSNIVLQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTM 217
Query: 879 LMAVVDRLIEIDVEIRWEDIGHDDLSKVYIFDMEMDDDYETEHSGAP--------HKEKL 1034
LMAVVD+LIE+D+EI W+ I DD SK IF+ME++D E E S K
Sbjct: 218 LMAVVDQLIELDLEIGWDAILQDDFSKG-IFEMELEDVDEVEESAEQDTGEFRLSRKSLA 276
Query: 1035 GD-VADKMDVLMELTLEHLKVCAEEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLC 1211
G+ +A+ +D L+ LT EHL+ C GRL +V++TL+ SFQ T+++ +KSKFTQF++FY C
Sbjct: 277 GNSIAELLDNLLVLTFEHLESCERAGRLAKVFETLLQSFQITVMSAYKSKFTQFVMFYAC 336
Query: 1212 SLAPEICGAQFASMLCNVFVSSRAPNT-RMTAAAYLASFLSRAKYLPLSVVSSSIKRLVD 1388
+L P+ CG +FA+ML ++FV P RM+A AYLAS+LSRAK+L S +SS +KRLVD
Sbjct: 337 ALDPDYCGMRFATMLADLFVQDSHPQPIRMSAVAYLASYLSRAKFLSASRISSMLKRLVD 396
Query: 1389 WSLQYVSNDDRKTMNPKVHRVFYSACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXX 1568
W L+Y D +NP HRVFYS CQAIMY+LCFRM + +D P+ +
Sbjct: 397 WCLEYGKTPDGD-INPNAHRVFYSGCQAIMYVLCFRMKVFMDVPRLKMQLLMPMEQILKH 455
Query: 1569 XXXXXXXXCLPSVVQEFSRQSQAMHVFESLNISITKEMLESESSKSFGGVERLDMFFPFD 1748
CLPSVV+EF QS+A +F + +LESE S++FGG+ERLD FFPFD
Sbjct: 456 KLNPLKV-CLPSVVEEFLLQSKAACLFTVSKTFVFDGLLESELSRAFGGLERLDTFFPFD 514
Query: 1749 PYLLKRSDRFIRPDFTFWTMVQVPIDEDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQ 1928
P LLKR D FIRP F FW+MV+ D+ D+ DGS D+ L +N+
Sbjct: 515 PCLLKRCDSFIRPMFVFWSMVKPTYDDAYDDDNDDGSSDDELIQDFVN---------ENE 565
Query: 1929 DVVEYLSVNDFQDAQSDDEEMDAFELSMNRMSITPKKSF 2045
D+++ F + D +D F+ ++ +MSITPK F
Sbjct: 566 DIMDDGVARSFDEQGLD---LDEFDCALKKMSITPKNGF 601
>OAY61017.1 hypothetical protein MANES_01G157300 [Manihot esculenta]
Length = 632
Score = 449 bits (1154), Expect = e-143
Identities = 270/618 (43%), Positives = 366/618 (59%), Gaps = 20/618 (3%)
Frame = +3
Query: 252 IRRALTSVLEGDTTFYNQLLEELKSVEAGDPDKEKTFLMTLQALSQAVSSINEHHHGSLL 431
+R AL SV GD+ Y+QL+ + E PD+ + +L+ALS AVS I+ HH SLL
Sbjct: 30 VRDALISVQTGDSDSYHQLVGVMHHSERLAPDEVALLVTSLKALSGAVSYIDNVHHDSLL 89
Query: 432 SWILGMSFWNFNSEVADGLMEFIVNLAASNGAFVDRCLDMLVRNXXXXXXXXXXXXXXXT 611
+ I GMS W + +V D L+E I+ LAASNG +VD CLDMLV N
Sbjct: 90 NSIFGMSLWKYGPDVMDALLELIIALAASNGKYVDSCLDMLVSNFMPP------------ 137
Query: 612 SKMMLVNKMEQILQKKTEHLARKKEVLDRVHLAIQQIAEIVPTAALRLQPIIIRRMPHRY 791
M LV ++Q A+K++VL RVH A++ I +++P AA RL +++ RMP +
Sbjct: 138 --MYLVYTLKQ-----PRGQAKKEQVLSRVHTALEDIVDLIPMAASRLSSVVVHRMPTTF 190
Query: 792 LA-------LEWNALYIENMLRIENSAIGEIIGSRMLMAVVDRLIEIDVEIRWEDIGHDD 950
+ +Y+EN+LR+E+ AI E +GSRMLMAVVD L E+DV I W+DI DD
Sbjct: 191 KKDLEKDHLMYRTEIYVENILRLESGAIREFVGSRMLMAVVDLLTELDVAIGWDDILRDD 250
Query: 951 LSKVYIFDMEMDD-----DYETEHSGAP---HKEKLGD--VADKMDVLMELTLEHLKVCA 1100
K IF +E++D D E ++ P + + LG VAD +D LM LT EHL+ CA
Sbjct: 251 SCKG-IFAIELEDADEVDDDENDYGELPRTLNHKSLGKNIVADLLDSLMVLTFEHLESCA 309
Query: 1101 EEGRLQQVYDTLMHSFQTTILNTHKSKFTQFLIFYLCSLAPEICGAQFASMLCNVFVSSR 1280
RL +V++TL+ SF TILNT+KSKF QF++FY C+L PE CG +FA L + F S
Sbjct: 310 NNKRLGEVFETLLDSFMLTILNTYKSKFAQFVMFYACALDPEKCGVKFAKTLADRFSCSD 369
Query: 1281 APNTRMTAAAYLASFLSRAKYLPLSVVSSSIKRLVDWSLQYVSNDDRKTMNPKVHRVFYS 1460
P TRM+A AYLAS+L+RAK+L + V+S++KRLVDW L+Y MNPK HRVFYS
Sbjct: 370 NPVTRMSAVAYLASYLARAKFLSPAFVASTLKRLVDWCLEYCETQG-SDMNPKAHRVFYS 428
Query: 1461 ACQAIMYILCFRMNLLLDDPKQRXXXXXXXXXXXXXXXXXXXXXCLPSVVQEFSRQSQAM 1640
CQAIMY+LCFRM L+D P+ + CLPS+V+EF +Q++A
Sbjct: 429 GCQAIMYVLCFRMKSLMDVPRFKSQLLLMPLEPVLKHKLDPLKVCLPSIVEEFLKQAKAA 488
Query: 1641 HVFESLNISITKEMLESESSKSFGGVERLDMFFPFDPYLLKRSDR-FIRPDFTFWTMVQV 1817
++F + I ++MLES+ SK FGG+ERLDMFFPFDP LLK+SDR +IRP+F +W V+
Sbjct: 489 YLFTTSETFIFEDMLESDFSKDFGGLERLDMFFPFDPCLLKKSDRGYIRPNFVYWKHVRT 548
Query: 1818 PI--DEDCDNIEVDGSEDEMLXXXXXXXXXXXXREFDNQDVVEYLSVNDFQDAQSDDEEM 1991
DED D+ + D +ED + D Q YL E+
Sbjct: 549 TYGSDED-DSSDADIAEDFVAENGESSMEEGRTGSLDEQ----YL-------------EL 590
Query: 1992 DAFELSMNRMSITPKKSF 2045
D F+ +MN+MSITPK F
Sbjct: 591 DEFDHAMNKMSITPKNGF 608