BLASTX nr result

ID: Ephedra29_contig00004506 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00004506
         (392 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABK21516.1 unknown [Picea sitchensis]                                  57   2e-07
ABR16882.1 unknown [Picea sitchensis]                                  52   9e-06

>ABK21516.1 unknown [Picea sitchensis]
          Length = 177

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -3

Query: 390 LQPYSVPVSEMASCGPTYSSSPSVRIEGFSCSSSEKQCIVSALA 259
           L P  V VS+ +SCG ++ ++ SVR+EGF CSSSEK CIVSALA
Sbjct: 134 LAPPPVNVSQKSSCGASFGANTSVRVEGFFCSSSEKHCIVSALA 177


>ABR16882.1 unknown [Picea sitchensis]
          Length = 167

 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = -3

Query: 390 LQPYSVPVSEMASCGPTYSSSPSVRIEGFSCSSSEKQCIVSALA 259
           L P  V VS+ +SCG ++ ++ SVR+EGF  SSSEK CIVSALA
Sbjct: 124 LAPPPVNVSQKSSCGASFGANTSVRVEGFFGSSSEKHCIVSALA 167


Top