BLASTX nr result
ID: Ephedra29_contig00004479
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00004479
(998 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_187651.1 RNA recognition motif and CCHC-type zinc finger doma... 265 2e-84
XP_010486639.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei... 263 7e-84
XP_008789535.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei... 263 8e-84
XP_010483618.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei... 263 1e-83
KNA11500.1 hypothetical protein SOVF_134680 [Spinacia oleracea] 261 2e-83
BAF00594.1 hypothetical protein [Arabidopsis thaliana] 261 3e-83
XP_010464710.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei... 260 8e-83
XP_002882666.1 hypothetical protein ARALYDRAFT_897216 [Arabidops... 260 9e-83
JAU49268.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protei... 257 2e-81
JAU71895.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protei... 257 3e-81
XP_010543557.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei... 256 3e-81
JAU83951.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protei... 256 6e-81
JAU09260.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protei... 255 8e-81
XP_008456528.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei... 254 2e-80
XP_006300227.1 hypothetical protein CARUB_v10016463mg [Capsella ... 254 2e-80
XP_018432623.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei... 254 2e-80
KFK38418.1 hypothetical protein AALP_AA3G110700 [Arabis alpina] 253 6e-80
XP_013587248.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei... 253 9e-80
XP_013672793.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei... 252 2e-79
OMO65556.1 hypothetical protein CCACVL1_21493 [Corchorus capsula... 251 2e-79
>NP_187651.1 RNA recognition motif and CCHC-type zinc finger domains containing
protein [Arabidopsis thaliana] Q9CAE4.1 RecName:
Full=U11/U12 small nuclear ribonucleoprotein 31 kDa
protein; Short=U11/U12 snRNP 31 kDa protein;
Short=U11/U12-31K AAG51392.1 hypothetical protein;
114721-113936 [Arabidopsis thaliana] AAV31168.1
At3g10400 [Arabidopsis thaliana] AAX49371.1 At3g10400
[Arabidopsis thaliana] AEE74900.1 RNA recognition motif
and CCHC-type zinc finger domains containing protein
[Arabidopsis thaliana] OAP03400.1 U11/U12-31K
[Arabidopsis thaliana]
Length = 261
Score = 265 bits (676), Expect = 2e-84
Identities = 143/257 (55%), Positives = 173/257 (67%), Gaps = 8/257 (3%)
Frame = -1
Query: 902 NSDEEDDIRMFCN-------PTTPNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVSNLD 744
+ DEEDD + P+ P + PS ++K S GGGSGGL PSKST+YVSNLD
Sbjct: 9 SDDEEDDTFYYRYSSVAAPPPSNPKHQPSSSAK---SSAPGGGSGGLAPSKSTLYVSNLD 65
Query: 743 FSLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNG 564
FSLTNSD+HT+FS FGKVARVTV+KDR TRQS+GVAFVLY + +A +A R M K LNG
Sbjct: 66 FSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNG 125
Query: 563 RLLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPKGKR 384
R LTVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECP+NQLGPRE PP PK KR
Sbjct: 126 RKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPK-KR 184
Query: 383 DYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVSKPKRDPDAP 204
+ E + FE++NWASVVD +R+ + ++ + +
Sbjct: 185 GRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGERLRKREAEEEEERRMK 244
Query: 203 R-AKKAKYFSDESGDDD 156
R KK YFSDES D+D
Sbjct: 245 RKEKKVSYFSDESDDED 261
>XP_010486639.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa
protein-like [Camelina sativa]
Length = 264
Score = 263 bits (672), Expect = 7e-84
Identities = 143/261 (54%), Positives = 176/261 (67%), Gaps = 9/261 (3%)
Frame = -1
Query: 911 AYWNSDEEDDIRMF------CNPTTPNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVSN 750
A+ + DEEDD + P++ + PS +S S GGGSGGL PSKST+YVSN
Sbjct: 5 AHRSDDEEDDTFYYRYSSVAAPPSSNSKQPSSSSSSAKSSAPGGGSGGLAPSKSTLYVSN 64
Query: 749 LDFSLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSL 570
LDFSLTNSD+HT+FS FGKVARVTV+KDR TR+S+GVAFVLY + +A +A + GK+L
Sbjct: 65 LDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRRSRGVAFVLYVSREDAAKAAGSIDGKTL 124
Query: 569 NGRLLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPK- 393
NGR LTV IA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECPRNQLGPRE PP PK
Sbjct: 125 NGRKLTVLIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPPPPKK 184
Query: 392 -GKRDYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVSKPKRD 216
G+R + E + D V E++NWASVVD +R+ ++ + +
Sbjct: 185 RGRRKEEEGEAEEIRDWSAAPSSPLTVAED-VIEEENWASVVDNEAGERLRMREAEEEEE 243
Query: 215 PDAPR-AKKAKYFSDESGDDD 156
R KKA YFSDES D+D
Sbjct: 244 RRKKRKEKKASYFSDESDDED 264
>XP_008789535.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein
[Phoenix dactylifera] XP_008789536.1 PREDICTED: U11/U12
small nuclear ribonucleoprotein 31 kDa protein [Phoenix
dactylifera]
Length = 258
Score = 263 bits (671), Expect = 8e-84
Identities = 148/258 (57%), Positives = 179/258 (69%), Gaps = 10/258 (3%)
Frame = -1
Query: 899 SDEEDDIRMFCNPTTPNNAPSLNSKGTYSHK------KGGGSGGLVPSKSTVYVSNLDFS 738
SD+EDD ++ P P+++ ++ S G + H+ GGSGGL PSKSTVYVSNLD+S
Sbjct: 8 SDDEDDDFLYRYPL-PSSSSAVASGGHHHHEATAGGASKGGSGGLAPSKSTVYVSNLDYS 66
Query: 737 LTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGRL 558
LTNSDLHTIFS FGKVARVTV+KDR +RQS+GVAFVL+ + +A AVR M K LNGR
Sbjct: 67 LTNSDLHTIFSTFGKVARVTVLKDRVSRQSRGVAFVLFVSRHDAAAAVRTMDRKVLNGRT 126
Query: 557 LTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPKGKRDY 378
++VSIASDNGRA +FI++RVYKDKSRCYECGE GHLSYECPRNQLGPRE P + +RD
Sbjct: 127 ISVSIASDNGRAAEFIRRRVYKDKSRCYECGEEGHLSYECPRNQLGPRERPNPKRARRDA 186
Query: 377 QPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVSKPK-RDPDAPR 201
Q R V +A FEDDNWAS+VD R + E+ + + RD R
Sbjct: 187 QRRGGGGV----REDDWGSDSGDEAGFEDDNWASIVDTRGAE--EKARGREEWRDDGKDR 240
Query: 200 AKKAK---YFSDESGDDD 156
KKAK YFSDESG+DD
Sbjct: 241 KKKAKKAGYFSDESGEDD 258
>XP_010483618.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa
protein-like [Camelina sativa]
Length = 265
Score = 263 bits (671), Expect = 1e-83
Identities = 144/258 (55%), Positives = 172/258 (66%), Gaps = 9/258 (3%)
Frame = -1
Query: 902 NSDEEDDIRMF------CNPTTPNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVSNLDF 741
+ DEEDD + P++ PS +S S GGSGGL PSKST+YVSNLDF
Sbjct: 9 SDDEEDDTFYYRYSSVAAPPSSNPKQPSSSSSSAKSSAPSGGSGGLAPSKSTLYVSNLDF 68
Query: 740 SLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGR 561
SLTNSD+HT+FS FGKVARVTV+KDR TR+S+GVAFVLY + +A +A M GK LNGR
Sbjct: 69 SLTNSDIHTLFSTFGKVARVTVLKDRHTRRSRGVAFVLYVSREDAAKAAGSMDGKILNGR 128
Query: 560 LLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPK--GK 387
LTVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECPRNQLGPRE PP PK G+
Sbjct: 129 KLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPPPPKKRGR 188
Query: 386 RDYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVSKPKRDPDA 207
R + E + D VFE+DNWASVVD +R+ ++ + +
Sbjct: 189 RKEEEGEAEEIRDWSAAPSSSLTVAED-VFEEDNWASVVDNEAGERLRMREAEEEEERRK 247
Query: 206 PRA-KKAKYFSDESGDDD 156
R K A YFSDES D+D
Sbjct: 248 KRKDKTASYFSDESDDED 265
>KNA11500.1 hypothetical protein SOVF_134680 [Spinacia oleracea]
Length = 245
Score = 261 bits (667), Expect = 2e-83
Identities = 135/248 (54%), Positives = 170/248 (68%), Gaps = 1/248 (0%)
Frame = -1
Query: 896 DEEDDIRMFCNPTTPNNAPSLNSKGTYSH-KKGGGSGGLVPSKSTVYVSNLDFSLTNSDL 720
D ++D + TTP + S S T + K+ GSGGL PSKSTVYVSN+DF+LTNSDL
Sbjct: 3 DSDEDDTFYYRYTTPTSGHSATSSSTTTTTKRSSGSGGLAPSKSTVYVSNIDFNLTNSDL 62
Query: 719 HTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGRLLTVSIA 540
TIFS FGKVARVT++KD ATR+S+GVAFVL+ + +AV A R+M GK LNGR L+ SIA
Sbjct: 63 FTIFSTFGKVARVTILKDHATRRSRGVAFVLFVARDDAVSAARQMNGKILNGRTLSASIA 122
Query: 539 SDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPKGKRDYQPRERP 360
SDNGRA +FI++RVYKDKSRCYECGE GHLSYECP+NQLGPRE P KG+R+ + R +
Sbjct: 123 SDNGRAAEFIRRRVYKDKSRCYECGEEGHLSYECPKNQLGPRERPVPKKGRREKEQRRK- 181
Query: 359 RVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVSKPKRDPDAPRAKKAKYF 180
+ FE+DNWASVVD +R+ + ++ + KKA YF
Sbjct: 182 ----EDEEEEAREGDEEEVAFEEDNWASVVDNAADQRLLMGHEEQQKLGKEKKVKKASYF 237
Query: 179 SDESGDDD 156
SDESG++D
Sbjct: 238 SDESGEED 245
>BAF00594.1 hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 261 bits (668), Expect = 3e-83
Identities = 142/257 (55%), Positives = 172/257 (66%), Gaps = 8/257 (3%)
Frame = -1
Query: 902 NSDEEDDIRMFCN-------PTTPNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVSNLD 744
+ DEEDD + P+ P + PS ++K S GGGSGGL PSKST+YVSNLD
Sbjct: 9 SDDEEDDTFYYRYSSVAAPPPSNPKHQPSSSAK---SSAPGGGSGGLAPSKSTLYVSNLD 65
Query: 743 FSLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNG 564
FSLTNSD+HT+FS FGKVARVTV+KDR TRQS+GVAFVLY + +A +A R M K LNG
Sbjct: 66 FSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAARSMDAKILNG 125
Query: 563 RLLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPKGKR 384
R LTVSIA+DNG A +FIKKRVYKDKSRCYECG+ GHLSYECP+NQLGPRE PP PK KR
Sbjct: 126 RKLTVSIAADNGLASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPK-KR 184
Query: 383 DYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVSKPKRDPDAP 204
+ E + FE++NWASVVD +R+ + ++ + +
Sbjct: 185 GRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGERLRKREAEEEEERRMK 244
Query: 203 R-AKKAKYFSDESGDDD 156
R KK YFSDES D+D
Sbjct: 245 RKEKKVSYFSDESDDED 261
>XP_010464710.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein
[Camelina sativa]
Length = 263
Score = 260 bits (665), Expect = 8e-83
Identities = 143/256 (55%), Positives = 171/256 (66%), Gaps = 7/256 (2%)
Frame = -1
Query: 902 NSDEEDDIRMFCNPT----TPNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVSNLDFSL 735
+ DEEDD + + +P+N +S S GGGSGGL PSKST+YVSNLDFSL
Sbjct: 9 SDDEEDDTFYYRYSSVAAPSPSNPKQSSSSSAKSSAPGGGSGGLAPSKSTLYVSNLDFSL 68
Query: 734 TNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGRLL 555
TNSD+HT+FS FGKVARVTV+KDR TR+S+GVAFVLY + +A +A M GK LNGR L
Sbjct: 69 TNSDIHTLFSTFGKVARVTVLKDRHTRRSRGVAFVLYVSREDAAKAAGSMDGKILNGRKL 128
Query: 554 TVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPKGKRDYQ 375
TVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECPRNQLGPRE PP PK KR +
Sbjct: 129 TVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPPPPK-KRGRR 187
Query: 374 PRERPRVXXXXXXXXXXXXXXXDAV--FEDDNWASVVDPREIKRVEQVVSKPKRDPDAPR 201
E V A FE++NWASVVD +R+ ++ + + R
Sbjct: 188 KEEEDGVGEEIRDWSAAPSSLTVAEEGFEEENWASVVDNEAGERLIMREAEEEEERRKKR 247
Query: 200 -AKKAKYFSDESGDDD 156
KK YFSDES D+D
Sbjct: 248 KEKKVSYFSDESDDED 263
>XP_002882666.1 hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata] EFH58925.1 hypothetical protein
ARALYDRAFT_897216 [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 260 bits (664), Expect = 9e-83
Identities = 141/256 (55%), Positives = 169/256 (66%), Gaps = 7/256 (2%)
Frame = -1
Query: 902 NSDEEDDIRMFCNPTT----PNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVSNLDFSL 735
+ DEEDD + + P+N +S S GGGSGGL PSKST+YVSNLDFSL
Sbjct: 9 SDDEEDDTFYYRYSSVAAPPPSNPRQPSSSSAKSSAPGGGSGGLAPSKSTLYVSNLDFSL 68
Query: 734 TNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGRLL 555
TNSD+HT+FS FGKVARVTV+KDR TRQS+GVAFVLY + +A +A R M K LNGR L
Sbjct: 69 TNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNGRKL 128
Query: 554 TVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPK--GKRD 381
TVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECP+NQLGPRE PP PK G+R
Sbjct: 129 TVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKKRGRRK 188
Query: 380 YQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVSKPKRDPDAPR 201
E + FE++NWASVVD +R+ ++ + + R
Sbjct: 189 EDEGEAEEIRDWSAAPSLEG-------FEEENWASVVDNEAGERLRMREAEEEEERRKKR 241
Query: 200 -AKKAKYFSDESGDDD 156
KK YFSDES D+D
Sbjct: 242 KEKKVSYFSDESDDED 257
>JAU49268.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein, partial
[Noccaea caerulescens]
Length = 277
Score = 257 bits (657), Expect = 2e-81
Identities = 141/260 (54%), Positives = 172/260 (66%), Gaps = 11/260 (4%)
Frame = -1
Query: 902 NSDEEDDIRMF------CNPTTPNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVSNLDF 741
+ DE+DDI + P TP+N +S S GGSGGL PSKST+Y+SNLDF
Sbjct: 24 SDDEKDDIFYYRYSSLAAPPLTPSNPKQASSSAKSSAP--GGSGGLAPSKSTLYISNLDF 81
Query: 740 SLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGR 561
SLTNSD+HT+FS FGKVARVTV+KDR TR+S+GVAFVLY + +A +A R M+GK LNGR
Sbjct: 82 SLTNSDIHTLFSTFGKVARVTVLKDRQTRRSRGVAFVLYVSREDASKAARSMEGKILNGR 141
Query: 560 LLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPKGKRD 381
LTVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECP+NQLGPRE PP PK KR
Sbjct: 142 KLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPK-KRG 200
Query: 380 YQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPR-----EIKRVEQVVSKPKRD 216
+ + FE++NWASVVD ++ E+ + K+
Sbjct: 201 RRKEDEGEAEEGRDWSAPSLAVTEG--FEEENWASVVDNEAGERLRMREAEEEEERRKKR 258
Query: 215 PDAPRAKKAKYFSDESGDDD 156
+A KK YFSDES D+D
Sbjct: 259 KEA-AGKKVSYFSDESDDED 277
>JAU71895.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein, partial
[Noccaea caerulescens]
Length = 275
Score = 257 bits (656), Expect = 3e-81
Identities = 142/262 (54%), Positives = 172/262 (65%), Gaps = 13/262 (4%)
Frame = -1
Query: 902 NSDEEDDIRMF------CNPTTPNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVSNLDF 741
+ DE+DDI + P TP+N +S S GGSGGL PSKST+Y+SNLDF
Sbjct: 22 SDDEKDDIFYYRYSSLAAPPLTPSNPKQASSSAKSSAP--GGSGGLAPSKSTLYISNLDF 79
Query: 740 SLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGR 561
SLTNSD+HT+FS FGKVARVTV+KDR TR+S+GVAFVLY + +A +A R M+GK LNGR
Sbjct: 80 SLTNSDIHTLFSTFGKVARVTVLKDRQTRRSRGVAFVLYVSREDASKAARSMEGKILNGR 139
Query: 560 LLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPK--GK 387
LTVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECP+NQLGPRE PP PK G+
Sbjct: 140 KLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKKRGR 199
Query: 386 RDYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPR-----EIKRVEQVVSKPK 222
R E FE++NWASVVD ++ E+ + K
Sbjct: 200 RKEDAGEAEE-----GRDWSAPSLALTEGFEEENWASVVDNEAGERLRMREAEEEEERRK 254
Query: 221 RDPDAPRAKKAKYFSDESGDDD 156
+ +A KK YFSDES D+D
Sbjct: 255 KRKEA-AGKKVSYFSDESDDED 275
>XP_010543557.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein
[Tarenaya hassleriana] XP_010543558.1 PREDICTED: U11/U12
small nuclear ribonucleoprotein 31 kDa protein [Tarenaya
hassleriana]
Length = 269
Score = 256 bits (655), Expect = 3e-81
Identities = 138/254 (54%), Positives = 165/254 (64%), Gaps = 6/254 (2%)
Frame = -1
Query: 899 SDEEDDIRMFCNPTTPNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVSNLDFSLTNSDL 720
SDEE+D + + + N + GGSGGL PSKSTVYVSNLD++LTNSDL
Sbjct: 25 SDEEEDNTFYYRYASVAASSDPNPVSAGKPRSSGGSGGLAPSKSTVYVSNLDYALTNSDL 84
Query: 719 HTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGRLLTVSIA 540
HT+FS FGK+ARVTV+KDR TRQS+GVAFVLY + +AV A R M GK LNGR LTVSIA
Sbjct: 85 HTLFSTFGKIARVTVLKDRQTRQSRGVAFVLYVSRDDAVNAARSMDGKILNGRKLTVSIA 144
Query: 539 SDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPKGKRDYQPRERP 360
DNGRAP+FIKKRVYKDKSRCYECG+ GHLSYECPRNQLGPRE P PK + + E
Sbjct: 145 VDNGRAPEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPLPPKRRGQRRDAEAE 204
Query: 359 RVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRV------EQVVSKPKRDPDAPRA 198
FE++NWAS VD +R+ E+ K ++ ++
Sbjct: 205 AETEGEEAAEG---------FEEENWASAVDNEAGERLRMREEEEERRMKKRKRGESGGG 255
Query: 197 KKAKYFSDESGDDD 156
KKA YFSDES +DD
Sbjct: 256 KKASYFSDESDEDD 269
>JAU83951.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein, partial
[Noccaea caerulescens]
Length = 268
Score = 256 bits (653), Expect = 6e-81
Identities = 143/262 (54%), Positives = 172/262 (65%), Gaps = 13/262 (4%)
Frame = -1
Query: 902 NSDEEDDIRMF------CNPTTPNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVSNLDF 741
+ DE DDI + P TP+N +S S GGSGGL PSKST+Y+SNLDF
Sbjct: 15 SDDETDDIFYYRYSSLAAPPLTPSNPKQASSSAKSSAP--GGSGGLAPSKSTLYISNLDF 72
Query: 740 SLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGR 561
SLTNSD+HT+FS FGKVARVTV+KDR TR+S+GVAFVLY + +A +A R M+GK LNGR
Sbjct: 73 SLTNSDIHTLFSTFGKVARVTVLKDRQTRRSRGVAFVLYVSREDASKAARSMEGKILNGR 132
Query: 560 LLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPK--GK 387
LTVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECP+NQLGPRE PP PK G+
Sbjct: 133 KLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKKRGR 192
Query: 386 RDYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRV-----EQVVSKPK 222
R E FE++NWASVVD +R+ E+ + K
Sbjct: 193 RKEDAGEAEE-----GRDWSAPSLALTEGFEEENWASVVDNEAGERLRMRDAEEEEERRK 247
Query: 221 RDPDAPRAKKAKYFSDESGDDD 156
+ +A KK YFSDES D+D
Sbjct: 248 KRKEA-AGKKVSYFSDESDDED 268
>JAU09260.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Noccaea
caerulescens]
Length = 266
Score = 255 bits (652), Expect = 8e-81
Identities = 142/272 (52%), Positives = 176/272 (64%), Gaps = 13/272 (4%)
Frame = -1
Query: 932 QEKETPMAYWNSDEEDDIRMF------CNPTTPNNAPSLNSKGTYSHKKGGGSGGLVPSK 771
Q K+ + + +++DDI + P TP+N +S S GGSGGL PSK
Sbjct: 3 QTKKKKIHQSDDEKDDDIFYYRYSSLAAPPLTPSNPKQASSSAKSSAP--GGSGGLAPSK 60
Query: 770 STVYVSNLDFSLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVR 591
ST+Y+SNLDFSLTNSD+HT+FS FGKVARVTV+KDR TR+S+GVAFVLY + +A +A R
Sbjct: 61 STLYISNLDFSLTNSDIHTLFSTFGKVARVTVLKDRQTRRSRGVAFVLYVSREDASKAAR 120
Query: 590 EMQGKSLNGRLLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPRE 411
M+GK LNGR LTVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECP+NQLGPRE
Sbjct: 121 SMEGKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRE 180
Query: 410 PPPAPK--GKRDYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPR-----EIK 252
PP PK G+R E FE++NWASVVD ++
Sbjct: 181 RPPPPKKRGRRKEDAGEAEE-----GRDWSAPSLALTEGFEEENWASVVDNEAGERLRMR 235
Query: 251 RVEQVVSKPKRDPDAPRAKKAKYFSDESGDDD 156
E+ + K+ +A KK YFSDES D+D
Sbjct: 236 EAEEEEERRKKRKEA-AGKKVSYFSDESDDED 266
>XP_008456528.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein
[Cucumis melo]
Length = 259
Score = 254 bits (649), Expect = 2e-80
Identities = 141/264 (53%), Positives = 173/264 (65%), Gaps = 15/264 (5%)
Frame = -1
Query: 902 NSDEEDDIRMFCNPTTPNNAPSLNSKG-------TYSH---KKGGGSGGLVPSKSTVYVS 753
+ +ED+ + P+ ++AP L S ++SH K GGGSGGLVPSKSTVYVS
Sbjct: 13 SDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGLVPSKSTVYVS 72
Query: 752 NLDFSLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKS 573
N D+SLTNSDLHT+FS FGK+ARVTV+KDR TR+S+GVAFV + Q +AV+A ++M GK
Sbjct: 73 NFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKI 132
Query: 572 LNGRLLTVSIASDNGRAPQFIKKRVYKDKSRCYECGE-PGHLSYECPRNQLGPREPPPAP 396
LNGR+L +IA+DNGRA +FI+KRVYKDKSRCYECG GHLSYECP+NQLGPRE P
Sbjct: 133 LNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQLGPRERPEPK 192
Query: 395 KGKRDYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRV----EQVVSK 228
+G+R FEDDNWASVVD +R+ E +V K
Sbjct: 193 RGRR----------GGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGENIVEK 242
Query: 227 PKRDPDAPRAKKAKYFSDESGDDD 156
K AKKA YFSDESG+DD
Sbjct: 243 KK-------AKKASYFSDESGEDD 259
>XP_006300227.1 hypothetical protein CARUB_v10016463mg [Capsella rubella]
EOA33125.1 hypothetical protein CARUB_v10016463mg
[Capsella rubella]
Length = 260
Score = 254 bits (649), Expect = 2e-80
Identities = 140/255 (54%), Positives = 169/255 (66%), Gaps = 6/255 (2%)
Frame = -1
Query: 902 NSDEEDDIRMFCNPTTPNNAPSLNSKGTYSHKKG---GGSGGLVPSKSTVYVSNLDFSLT 732
+SD+E+D + ++ P N K S K GGSGGL PSKST+YVSNLDFSLT
Sbjct: 8 HSDDEEDDTFYYRYSSVAAPPPSNPKQPSSSAKSSAPGGSGGLAPSKSTLYVSNLDFSLT 67
Query: 731 NSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGRLLT 552
NSD+HT+FS FGKVARVTV+KDR TR+S+GVAFVLY + +A +A M GK LNGR LT
Sbjct: 68 NSDIHTLFSTFGKVARVTVLKDRHTRRSRGVAFVLYVSREDAAKASGSMDGKILNGRKLT 127
Query: 551 VSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPK--GKRDY 378
VSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECPRNQLGPRE PP PK G+R
Sbjct: 128 VSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPPPPKKRGRRKE 187
Query: 377 QPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVSKPKRDPDAPR- 201
E + FE++NWASVVD +R+ ++ + + R
Sbjct: 188 DGGEAEET--REWSAAPPSLAVAEETFEEENWASVVDNEAGERLRMREAEEEEERRKKRK 245
Query: 200 AKKAKYFSDESGDDD 156
KK YFSDES D+D
Sbjct: 246 EKKVSYFSDESDDED 260
>XP_018432623.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein
[Raphanus sativus]
Length = 258
Score = 254 bits (648), Expect = 2e-80
Identities = 140/257 (54%), Positives = 169/257 (65%), Gaps = 8/257 (3%)
Frame = -1
Query: 902 NSDEEDDIRMFCNPTTPNNAPSLNSKGTYSHKKGG---GSGGLVPSKSTVYVSNLDFSLT 732
+ DEEDD + + PS +K + S K GSGGL PSKST+YVSNLDFSLT
Sbjct: 12 SDDEEDDTFYYRYSSVAAPPPSHPTKPSSSSSKSSAPTGSGGLAPSKSTLYVSNLDFSLT 71
Query: 731 NSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKSLNGRLLT 552
NSD+HT+FS FGK+ARVTV+KDR TR+S+GVAFVLY + +A +A R M+GK LNGR LT
Sbjct: 72 NSDIHTLFSTFGKLARVTVLKDRETRRSRGVAFVLYVSRDDAAKAARSMEGKILNGRKLT 131
Query: 551 VSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPKGKRDYQP 372
VS+A+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECPRNQLGPRE PP PK KR +
Sbjct: 132 VSMAADNGRAAEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPPPPK-KRGRRR 190
Query: 371 RERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPR-----EIKRVEQVVSKPKRDPDA 207
E F +DNWASVVD ++ E+ + K+ +A
Sbjct: 191 EEEGEAEPSGAVTEEG--------FGEDNWASVVDNEAGERLRMREAEEEEERRKKRKEA 242
Query: 206 PRAKKAKYFSDESGDDD 156
KK YFSDES D+D
Sbjct: 243 -AGKKVSYFSDESDDED 258
>KFK38418.1 hypothetical protein AALP_AA3G110700 [Arabis alpina]
Length = 264
Score = 253 bits (646), Expect = 6e-80
Identities = 138/266 (51%), Positives = 175/266 (65%), Gaps = 17/266 (6%)
Frame = -1
Query: 902 NSDEEDDIRMF----------CNPTTPNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYVS 753
+ D+EDD + NP P+++ S +K + S GGSGGL PSKST+YVS
Sbjct: 13 DEDDEDDTFYYRYSSVTAPPLSNPKQPSSSSSSAAKSS-SSTPHGGSGGLAPSKSTLYVS 71
Query: 752 NLDFSLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGKS 573
NLDFSLTNSD+HT+FS FGKVA+VTV+KDR TR+S+GVAFVLY + +A +A M+GK
Sbjct: 72 NLDFSLTNSDIHTLFSTFGKVAKVTVLKDRQTRRSRGVAFVLYVSREDAAKAASSMEGKI 131
Query: 572 LNGRLLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAPK 393
LNGR LTVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECPRNQLGPRE PP PK
Sbjct: 132 LNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPPPPK 191
Query: 392 ---GKRDYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVSKPK 222
G+++ + R+ + FE++NW SVVD +R+ ++ +
Sbjct: 192 RRGGRKEEEGRDWSSLGVVEG-------------FEEENWGSVVDNEAGERLRMREAEEE 238
Query: 221 RDPDAPR----AKKAKYFSDESGDDD 156
+ R KK YFSDES D+D
Sbjct: 239 EERRKKRKECAEKKVSYFSDESDDED 264
>XP_013587248.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein
[Brassica oleracea var. oleracea]
Length = 265
Score = 253 bits (645), Expect = 9e-80
Identities = 139/267 (52%), Positives = 172/267 (64%), Gaps = 8/267 (2%)
Frame = -1
Query: 932 QEKETPMAYWNSDEEDDIRMFCNPTTPNNAPSLNSKGTYSHKKGG----GSGGLVPSKST 765
Q K+ + + DEE+D + ++ PS +K + S K GSGGL PSKST
Sbjct: 3 QTKKKKKVHHSDDEEEDDTFYYRYSSVAAPPSHPTKPSSSSSKSSAPPSGSGGLAPSKST 62
Query: 764 VYVSNLDFSLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREM 585
+YVSNLDFSLTNSD+HT+FS FGKVARVTV+KDR TR+S+GVAFVLY + +A +A + M
Sbjct: 63 LYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRQTRRSRGVAFVLYVSRDDAGKAAKSM 122
Query: 584 QGKSLNGRLLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPP 405
+GK LNGR LTVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECPRNQLGPRE P
Sbjct: 123 EGKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERP 182
Query: 404 PAPKGKRDYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVSKP 225
P PK + R R + +DNWASVVD +R+ ++
Sbjct: 183 PPPKKR----GRRREEEGAGEESRDWSGTDVTEEGVGEDNWASVVDNEAGERLRMREAEE 238
Query: 224 KRDPDAPR----AKKAKYFSDESGDDD 156
+ + R KK YFSDES D+D
Sbjct: 239 EEERRRKRKEAAGKKVSYFSDESDDED 265
>XP_013672793.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa
protein-like [Brassica napus] CDY00929.1 BnaC05g42710D
[Brassica napus]
Length = 267
Score = 252 bits (643), Expect = 2e-79
Identities = 140/269 (52%), Positives = 175/269 (65%), Gaps = 8/269 (2%)
Frame = -1
Query: 938 KNQEKETPMAYWNSDEEDDIRMFCNPTTPNNAPSLNSKGTYSHKKGG----GSGGLVPSK 771
KN++K+ + + DEE+D + ++ PS +K + S K GSGGL PSK
Sbjct: 6 KNKKKKV---HHSDDEEEDDTFYYRYSSVAAPPSHPTKPSSSSSKSSAPPSGSGGLAPSK 62
Query: 770 STVYVSNLDFSLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVR 591
ST+YVSNLDFSLTNSD+HT+FS FGKVARVTV+KDR TR+S+GVAFVLY + +A +A +
Sbjct: 63 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRQTRRSRGVAFVLYVSRDDAGKAAK 122
Query: 590 EMQGKSLNGRLLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPRE 411
M+GK LNGR LTVSIA+DNGRA +FIKKRVYKDKSRCYECG+ GHLSYECPRNQLGPRE
Sbjct: 123 SMEGKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRE 182
Query: 410 PPPAPKGKRDYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVDPREIKRVEQVVS 231
PP PK + R R + +DNWASVVD +R+ +
Sbjct: 183 RPPPPKKR----GRRREEEGEGEESRDWSGTDVTEEGVGEDNWASVVDNEAGERLRMREA 238
Query: 230 KPKRDPDAPR----AKKAKYFSDESGDDD 156
+ + + R KK YFSDES D+D
Sbjct: 239 EEEEERRRKRKEAAGKKVSYFSDESDDED 267
>OMO65556.1 hypothetical protein CCACVL1_21493 [Corchorus capsularis]
Length = 260
Score = 251 bits (642), Expect = 2e-79
Identities = 138/263 (52%), Positives = 169/263 (64%), Gaps = 14/263 (5%)
Frame = -1
Query: 902 NSDEEDDIRMFCNPTT-----------PNNAPSLNSKGTYSHKKGGGSGGLVPSKSTVYV 756
NSD E+D + ++ P N+ SK T S GGGSGGL PSKST+YV
Sbjct: 10 NSDSEEDETFYYRYSSAVAPPSSSSFQPRNSNQTTSKSTGS---GGGSGGLAPSKSTLYV 66
Query: 755 SNLDFSLTNSDLHTIFSRFGKVARVTVMKDRATRQSKGVAFVLYTKQSEAVEAVREMQGK 576
SNLD+SLTNSDLHT+FS FGK+ARVTV+KDR TR S+GVAF+ + + EA+ A M GK
Sbjct: 67 SNLDYSLTNSDLHTLFSTFGKIARVTVLKDRVTRTSRGVAFIQFVSRDEALSAASVMHGK 126
Query: 575 SLNGRLLTVSIASDNGRAPQFIKKRVYKDKSRCYECGEPGHLSYECPRNQLGPREPPPAP 396
LNGR L+ SIA+DNGRAP+FIKKRVYKDKSRCYECG GHLSYECP+NQLGPRE P
Sbjct: 127 ILNGRTLSASIAADNGRAPEFIKKRVYKDKSRCYECGVTGHLSYECPKNQLGPRERPVPK 186
Query: 395 KGKRDYQPRERPRVXXXXXXXXXXXXXXXDAVFEDDNWASVVD---PREIKRVEQVVSKP 225
KG+R +R V FE++NWASVVD +++ + V K
Sbjct: 187 KGRRGGGGEDRKEVGDDWADDESDNGEG----FEEENWASVVDGAAEERLRKADMVEEKK 242
Query: 224 KRDPDAPRAKKAKYFSDESGDDD 156
K+ A+KA YFSDES ++D
Sbjct: 243 KK-----VARKASYFSDESDEED 260