BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00004455
         (294 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015887217.1 PREDICTED: LOW QUALITY PROTEIN: small subunit pro...    84   8e-17
XP_016197198.1 PREDICTED: small subunit processome component 20 ...    83   1e-16
XP_015958865.1 PREDICTED: small subunit processome component 20 ...    83   1e-16
XP_010532760.1 PREDICTED: small subunit processome component 20 ...    80   1e-15
XP_006839008.1 PREDICTED: U3 small nucleolar RNA-associated prot...    80   2e-15
XP_016197199.1 PREDICTED: small subunit processome component 20 ...    78   8e-15
XP_015958866.1 PREDICTED: small subunit processome component 20 ...    78   8e-15
XP_016197197.1 PREDICTED: small subunit processome component 20 ...    78   8e-15
XP_015958864.1 PREDICTED: small subunit processome component 20 ...    78   8e-15
XP_016700164.1 PREDICTED: small subunit processome component 20 ...    78   1e-14
XP_017648939.1 PREDICTED: small subunit processome component 20 ...    78   1e-14
XP_017648938.1 PREDICTED: small subunit processome component 20 ...    78   1e-14
XP_012455021.1 PREDICTED: small subunit processome component 20 ...    76   5e-14
XP_010257842.1 PREDICTED: small subunit processome component 20 ...    76   5e-14
XP_012455019.1 PREDICTED: small subunit processome component 20 ...    76   5e-14
XP_010445040.1 PREDICTED: U3 small nucleolar RNA-associated prot...    75   1e-13
XP_001781815.1 predicted protein [Physcomitrella patens] EDQ5336...    75   1e-13
XP_019089460.1 PREDICTED: small subunit processome component 20 ...    75   1e-13
KJB68805.1 hypothetical protein B456_011G152900 [Gossypium raimo...    75   1e-13
KJB68807.1 hypothetical protein B456_011G152900 [Gossypium raimo...    75   1e-13

>XP_015887217.1 PREDICTED: LOW QUALITY PROTEIN: small subunit processome component
           20 homolog [Ziziphus jujuba]
          Length = 2701

 Score = 84.0 bits (206), Expect = 8e-17
 Identities = 39/81 (48%), Positives = 58/81 (71%)
 Frame = -3

Query: 250 CKVVLQLLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLF 71
           C V+ QLL +E T L++ T RKV+ +IS +QMD+SAGR+P +Y+  LL+ ++GV HNR  
Sbjct: 708 CNVLRQLLSIETTPLSVTTSRKVTLLISKVQMDLSAGRIPEAYVPLLLNGIIGVFHNRFS 767

Query: 70  LLWDAVVECLAILLERNHKIV 8
            LW+   ECLA+L+ +N  +V
Sbjct: 768 NLWNPASECLALLISQNFGLV 788


>XP_016197198.1 PREDICTED: small subunit processome component 20 homolog isoform X2
           [Arachis ipaensis]
          Length = 2743

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 39/93 (41%), Positives = 66/93 (70%)
 Frame = -3

Query: 286 EEVREDIVSFPFCKVVLQLLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLL 107
           E+ R+  VS P  K ++ LL +E+T +++ T R +  +IS IQMD+SAGR+P  Y+L +L
Sbjct: 699 EKKRKTEVS-PISKALVLLLSIEKTPISISTSRSIQQLISKIQMDLSAGRIPQLYVLLVL 757

Query: 106 HSLVGVLHNRLFLLWDAVVECLAILLERNHKIV 8
           + L+G+L+NR   LWD ++EC+A+L+ ++  +V
Sbjct: 758 NGLLGILNNRFSDLWDPILECIAVLISKHFSLV 790


>XP_015958865.1 PREDICTED: small subunit processome component 20 homolog isoform X2
           [Arachis duranensis]
          Length = 2743

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 39/93 (41%), Positives = 66/93 (70%)
 Frame = -3

Query: 286 EEVREDIVSFPFCKVVLQLLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLL 107
           E+ R+  VS P  K ++ LL +E+T +++ T R +  +IS IQMD+SAGR+P  Y+L +L
Sbjct: 699 EKKRKTEVS-PISKALVLLLSIEKTPISISTSRSIQQLISKIQMDLSAGRIPQLYVLLVL 757

Query: 106 HSLVGVLHNRLFLLWDAVVECLAILLERNHKIV 8
           + L+G+L+NR   LWD ++EC+A+L+ ++  +V
Sbjct: 758 NGLLGILNNRFSDLWDPILECIAVLISKHFSLV 790


>XP_010532760.1 PREDICTED: small subunit processome component 20 homolog isoform X1
           [Tarenaya hassleriana] XP_010532761.1 PREDICTED: small
           subunit processome component 20 homolog isoform X2
           [Tarenaya hassleriana]
          Length = 2668

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 38/92 (41%), Positives = 59/92 (64%)
 Frame = -3

Query: 283 EVREDIVSFPFCKVVLQLLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLH 104
           +  E   S P   V+  LL +EET L + T RK+  +I+TIQMD+SAGR+  +Y+  + +
Sbjct: 676 KTEETQASLPKSSVLQSLLSIEETPLTITTSRKLVNLIATIQMDLSAGRIHEAYVPLVFN 735

Query: 103 SLVGVLHNRLFLLWDAVVECLAILLERNHKIV 8
            ++GV HNR   LWD   ECLA+LL+++  ++
Sbjct: 736 GMMGVFHNRFSYLWDQTSECLAVLLKKHTGVI 767


>XP_006839008.1 PREDICTED: U3 small nucleolar RNA-associated protein 20 [Amborella
           trichopoda] ERN01577.1 hypothetical protein
           AMTR_s00002p00271990 [Amborella trichopoda]
          Length = 2766

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 37/81 (45%), Positives = 55/81 (67%)
 Frame = -3

Query: 250 CKVVLQLLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLF 71
           C V   L  +E T+L++ T RKV  +IS IQM+ISA R+P  Y+  LLH ++G+ HN+  
Sbjct: 745 CNVTQLLHLIETTSLSVSTSRKVVLLISKIQMEISAARVPEPYLTLLLHGIIGIFHNQFA 804

Query: 70  LLWDAVVECLAILLERNHKIV 8
            LWD  +ECL +L++R+ K+V
Sbjct: 805 HLWDPAIECLMVLVKRHTKLV 825


>XP_016197199.1 PREDICTED: small subunit processome component 20 homolog isoform X3
           [Arachis ipaensis]
          Length = 2376

 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 33/75 (44%), Positives = 56/75 (74%)
 Frame = -3

Query: 232 LLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLFLLWDAV 53
           LL +E+T +++ T R +  +IS IQMD+SAGR+P  Y+L +L+ L+G+L+NR   LWD +
Sbjct: 723 LLSIEKTPISISTSRSIQQLISKIQMDLSAGRIPQLYVLLVLNGLLGILNNRFSDLWDPI 782

Query: 52  VECLAILLERNHKIV 8
           +EC+A+L+ ++  +V
Sbjct: 783 LECIAVLISKHFSLV 797


>XP_015958866.1 PREDICTED: small subunit processome component 20 homolog isoform X3
           [Arachis duranensis]
          Length = 2376

 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 33/75 (44%), Positives = 56/75 (74%)
 Frame = -3

Query: 232 LLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLFLLWDAV 53
           LL +E+T +++ T R +  +IS IQMD+SAGR+P  Y+L +L+ L+G+L+NR   LWD +
Sbjct: 723 LLSIEKTPISISTSRSIQQLISKIQMDLSAGRIPQLYVLLVLNGLLGILNNRFSDLWDPI 782

Query: 52  VECLAILLERNHKIV 8
           +EC+A+L+ ++  +V
Sbjct: 783 LECIAVLISKHFSLV 797


>XP_016197197.1 PREDICTED: small subunit processome component 20 homolog isoform X1
           [Arachis ipaensis]
          Length = 2750

 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 33/75 (44%), Positives = 56/75 (74%)
 Frame = -3

Query: 232 LLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLFLLWDAV 53
           LL +E+T +++ T R +  +IS IQMD+SAGR+P  Y+L +L+ L+G+L+NR   LWD +
Sbjct: 723 LLSIEKTPISISTSRSIQQLISKIQMDLSAGRIPQLYVLLVLNGLLGILNNRFSDLWDPI 782

Query: 52  VECLAILLERNHKIV 8
           +EC+A+L+ ++  +V
Sbjct: 783 LECIAVLISKHFSLV 797


>XP_015958864.1 PREDICTED: small subunit processome component 20 homolog isoform X1
           [Arachis duranensis]
          Length = 2750

 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 33/75 (44%), Positives = 56/75 (74%)
 Frame = -3

Query: 232 LLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLFLLWDAV 53
           LL +E+T +++ T R +  +IS IQMD+SAGR+P  Y+L +L+ L+G+L+NR   LWD +
Sbjct: 723 LLSIEKTPISISTSRSIQQLISKIQMDLSAGRIPQLYVLLVLNGLLGILNNRFSDLWDPI 782

Query: 52  VECLAILLERNHKIV 8
           +EC+A+L+ ++  +V
Sbjct: 783 LECIAVLISKHFSLV 797


>XP_016700164.1 PREDICTED: small subunit processome component 20 homolog [Gossypium
           hirsutum]
          Length = 2489

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 38/79 (48%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = -3

Query: 241 VLQLLQ-VEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLFLL 65
           VLQLL  +E T L++ T RKV+ +IS IQM +SAGR+P +Y+  +L+ ++G+ HNR   L
Sbjct: 624 VLQLLMSIEATPLSISTSRKVTLLISKIQMGLSAGRIPETYVPLVLNGIIGIFHNRFSYL 683

Query: 64  WDAVVECLAILLERNHKIV 8
           WDA  ECLA+L+ ++  +V
Sbjct: 684 WDAASECLAVLISKHTGLV 702


>XP_017648939.1 PREDICTED: small subunit processome component 20 homolog isoform X2
           [Gossypium arboreum]
          Length = 2683

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 38/79 (48%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = -3

Query: 241 VLQLLQ-VEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLFLL 65
           VLQLL  +E T L++ T RKV+ +IS IQM +SAGR+P +Y+  +L+ ++G+ HNR   L
Sbjct: 668 VLQLLMSIEATPLSISTSRKVTLLISKIQMGLSAGRIPETYVPLVLNGIIGIFHNRFSYL 727

Query: 64  WDAVVECLAILLERNHKIV 8
           WDA  ECLA+L+ ++  +V
Sbjct: 728 WDAASECLAVLISKHTGLV 746


>XP_017648938.1 PREDICTED: small subunit processome component 20 homolog isoform X1
           [Gossypium arboreum]
          Length = 2724

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 38/79 (48%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
 Frame = -3

Query: 241 VLQLLQ-VEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLFLL 65
           VLQLL  +E T L++ T RKV+ +IS IQM +SAGR+P +Y+  +L+ ++G+ HNR   L
Sbjct: 709 VLQLLMSIEATPLSISTSRKVTLLISKIQMGLSAGRIPETYVPLVLNGIIGIFHNRFSYL 768

Query: 64  WDAVVECLAILLERNHKIV 8
           WDA  ECLA+L+ ++  +V
Sbjct: 769 WDAASECLAVLISKHTGLV 787


>XP_012455021.1 PREDICTED: small subunit processome component 20 homolog isoform X3
           [Gossypium raimondii]
          Length = 2320

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -3

Query: 247 KVVLQLLQ-VEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLF 71
           K VLQLL  +E T L++ T RKV+ +IS IQ  +SAGR+P +Y+  +L+ ++G+ HNR  
Sbjct: 303 KQVLQLLMSIEATPLSISTSRKVTLLISKIQTGLSAGRIPKTYVPLVLNGIIGIFHNRFS 362

Query: 70  LLWDAVVECLAILLERNHKIV 8
            LWDA  ECLA+L+  +  +V
Sbjct: 363 YLWDAASECLAVLISNHTGLV 383


>XP_010257842.1 PREDICTED: small subunit processome component 20 homolog [Nelumbo
           nucifera]
          Length = 2710

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 34/76 (44%), Positives = 52/76 (68%)
 Frame = -3

Query: 250 CKVVLQLLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLF 71
           C  V+QLL +E T L++ T RK+  +IS IQMD+SAGR+  +Y   LL+ ++G+ HNR  
Sbjct: 707 CHNVVQLLSIESTPLSISTSRKIVVLISRIQMDLSAGRISEAYAPLLLNGVIGIFHNRFG 766

Query: 70  LLWDAVVECLAILLER 23
            LW+  +ECL +L+ +
Sbjct: 767 HLWEPTLECLVVLINK 782


>XP_012455019.1 PREDICTED: small subunit processome component 20 homolog isoform X1
           [Gossypium raimondii]
          Length = 2726

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -3

Query: 247 KVVLQLLQ-VEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLF 71
           K VLQLL  +E T L++ T RKV+ +IS IQ  +SAGR+P +Y+  +L+ ++G+ HNR  
Sbjct: 709 KQVLQLLMSIEATPLSISTSRKVTLLISKIQTGLSAGRIPKTYVPLVLNGIIGIFHNRFS 768

Query: 70  LLWDAVVECLAILLERNHKIV 8
            LWDA  ECLA+L+  +  +V
Sbjct: 769 YLWDAASECLAVLISNHTGLV 789


>XP_010445040.1 PREDICTED: U3 small nucleolar RNA-associated protein 20-like
           [Camelina sativa]
          Length = 2049

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 41/89 (46%), Positives = 57/89 (64%)
 Frame = -3

Query: 283 EVREDIVSFPFCKVVLQLLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLH 104
           +  E I S P   V+  L  VEET   +DT R + G+ISTIQ D+SAGR+  +Y+  +L+
Sbjct: 282 KTEEIIKSLPKGNVLQLLRSVEETAPTVDTSRMLVGLISTIQKDLSAGRIHEAYVKLVLN 341

Query: 103 SLVGVLHNRLFLLWDAVVECLAILLERNH 17
            ++G+LHNR   LW    ECLA+L+ RNH
Sbjct: 342 GMLGLLHNRYLDLWGPASECLAVLV-RNH 369


>XP_001781815.1 predicted protein [Physcomitrella patens] EDQ53369.1 predicted
           protein, partial [Physcomitrella patens]
          Length = 2129

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 31/74 (41%), Positives = 55/74 (74%)
 Frame = -3

Query: 247 KVVLQLLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLFL 68
           ++V Q+L +E   L L++ R+ + I++ I++D+ AGR+P +Y++PL+H +VG+L NR  +
Sbjct: 382 QLVQQMLSIEAAPLVLESCRQSNLIVAHIKVDVCAGRVPGAYVVPLVHMMVGILRNRFSV 441

Query: 67  LWDAVVECLAILLE 26
           LWD  +ECLA L++
Sbjct: 442 LWDPAMECLAALID 455


>XP_019089460.1 PREDICTED: small subunit processome component 20 homolog [Camelina
           sativa]
          Length = 2647

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 41/89 (46%), Positives = 57/89 (64%)
 Frame = -3

Query: 283 EVREDIVSFPFCKVVLQLLQVEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLH 104
           +  E I S P   V+  L  VEET   +DT R + G+ISTIQ D+SAGR+  +Y+  +L+
Sbjct: 673 KTEEIIKSLPKGNVLQLLRSVEETAPTVDTSRMLVGLISTIQKDLSAGRIHEAYVKLVLN 732

Query: 103 SLVGVLHNRLFLLWDAVVECLAILLERNH 17
            ++G+LHNR   LW    ECLA+L+ RNH
Sbjct: 733 GMLGLLHNRYLDLWGPASECLAVLV-RNH 760


>KJB68805.1 hypothetical protein B456_011G152900 [Gossypium raimondii]
          Length = 2080

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 37/79 (46%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -3

Query: 241 VLQLLQ-VEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLFLL 65
           VLQLL  +E T L++ T RKV+ +IS IQ  +SAGR+P +Y+  +L+ ++G+ HNR   L
Sbjct: 65  VLQLLMSIEATPLSISTSRKVTLLISKIQTGLSAGRIPKTYVPLVLNGIIGIFHNRFSYL 124

Query: 64  WDAVVECLAILLERNHKIV 8
           WDA  ECLA+L+  +  +V
Sbjct: 125 WDAASECLAVLISNHTGLV 143


>KJB68807.1 hypothetical protein B456_011G152900 [Gossypium raimondii]
          Length = 2655

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 37/79 (46%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = -3

Query: 241 VLQLLQ-VEETTLALDTVRKVSGIISTIQMDISAGRLPASYMLPLLHSLVGVLHNRLFLL 65
           VLQLL  +E T L++ T RKV+ +IS IQ  +SAGR+P +Y+  +L+ ++G+ HNR   L
Sbjct: 640 VLQLLMSIEATPLSISTSRKVTLLISKIQTGLSAGRIPKTYVPLVLNGIIGIFHNRFSYL 699

Query: 64  WDAVVECLAILLERNHKIV 8
           WDA  ECLA+L+  +  +V
Sbjct: 700 WDAASECLAVLISNHTGLV 718