BLASTX nr result
ID: Ephedra29_contig00004445
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00004445
(2364 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABR16388.1 unknown [Picea sitchensis] 392 e-122
XP_006429052.1 hypothetical protein CICLE_v10013605mg [Citrus cl... 227 4e-60
XP_010037855.1 PREDICTED: pentatricopeptide repeat-containing pr... 227 5e-60
XP_017615828.1 PREDICTED: pentatricopeptide repeat-containing pr... 226 6e-60
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 218 3e-59
XP_012459090.1 PREDICTED: pentatricopeptide repeat-containing pr... 224 4e-59
XP_016680449.1 PREDICTED: pentatricopeptide repeat-containing pr... 224 5e-59
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ... 217 6e-59
XP_015889101.1 PREDICTED: pentatricopeptide repeat-containing pr... 223 1e-58
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 215 2e-58
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 215 2e-58
XP_008447642.1 PREDICTED: pentatricopeptide repeat-containing pr... 221 4e-58
XP_010529844.1 PREDICTED: pentatricopeptide repeat-containing pr... 221 6e-58
XP_010427028.1 PREDICTED: pentatricopeptide repeat-containing pr... 220 9e-58
XP_015889158.1 PREDICTED: pentatricopeptide repeat-containing pr... 219 2e-57
KZV35051.1 pentatricopeptide repeat-containing protein chloropla... 218 6e-57
XP_004142210.1 PREDICTED: pentatricopeptide repeat-containing pr... 218 7e-57
KGN54231.1 hypothetical protein Csa_4G294390 [Cucumis sativus] 218 1e-56
XP_002876221.1 hypothetical protein ARALYDRAFT_906766 [Arabidops... 216 4e-56
XP_018841708.1 PREDICTED: pentatricopeptide repeat-containing pr... 214 1e-55
>ABR16388.1 unknown [Picea sitchensis]
Length = 700
Score = 392 bits (1006), Expect = e-122
Identities = 216/517 (41%), Positives = 320/517 (61%), Gaps = 3/517 (0%)
Frame = +3
Query: 459 LDPLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMME 638
L+P V VL Q DA LRFF+WA +EGY HN + Y + IL RAKMF E +++++
Sbjct: 181 LNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQ 240
Query: 639 EMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSL--GAFNAVMKGLV 812
+M++ +G EI +S+ + V YG G +LE F MK +G++P L A+N+V+ LV
Sbjct: 241 KMQT-QGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLV 299
Query: 813 QSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIY 992
++ L++ + L QM G+ N TY+ +I+C DMI PD+
Sbjct: 300 KNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVV 359
Query: 993 NYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKM 1172
YTIVISALCK I++A +++ MR NGC PN +TYNA+I+GL +RP+ ALE + M
Sbjct: 360 TYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLM 419
Query: 1173 EQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYLREKND 1349
EQ +P + +TY+IL GLCK + +AKE+F EA A G + + VT N +L GY R
Sbjct: 420 EQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRL 479
Query: 1350 YEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKM 1529
EAM + +M + C PD TY +I ++ N++ +AL ++ EM G D++ L +
Sbjct: 480 IEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNIL 539
Query: 1530 AKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTG 1709
A+GL RVG H++ FY+ ++++G +Y ASDYYLAI+ +T GEM++A L +MI+ G
Sbjct: 540 ARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMIN-KG 598
Query: 1710 RRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAE 1889
PN+T Y+ ++KG C+Q RL +A MLN MIE+ I P +YNILIK + G+ QDA+
Sbjct: 599 YSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDAD 658
Query: 1890 QLYDFAMQRGIRPSIKPVAEEPEYLLKEYVKSQEEMV 2000
QLY A++RG+ + KPV +EP+ L + V+SQEE+V
Sbjct: 659 QLYATALERGVVLNPKPVIQEPDELPEGLVRSQEELV 695
>XP_006429052.1 hypothetical protein CICLE_v10013605mg [Citrus clementina]
XP_006480788.1 PREDICTED: pentatricopeptide
repeat-containing protein At3g53700, chloroplastic
[Citrus sinensis] ESR42292.1 hypothetical protein
CICLE_v10013605mg [Citrus clementina]
Length = 768
Score = 227 bits (579), Expect = 4e-60
Identities = 139/483 (28%), Positives = 239/483 (49%), Gaps = 2/483 (0%)
Frame = +3
Query: 486 LRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFE 665
LR Q D + LR F WA + +A N Y + T L + FD R ++E+M+ + G +
Sbjct: 69 LRRQRDESSALRLFTWASKQPNFAPNSSLYEELLTKLGKVGAFDSMRRILEDMK-LSGCQ 127
Query: 666 IPKSVFNVMVKGYGYEGMISMALEMFQKMKN-LGHKPSLGAFNAVMKGLVQSDDLEVMQI 842
I F + V+ Y M + LE+ Q MK+ G +P+ +N ++ LV + L++++
Sbjct: 128 IRTGTFLIFVESYAKFDMYNEILEVTQLMKDDFGLEPNTHFYNHLLNVLVDGNKLKLVET 187
Query: 843 LHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALC 1022
H M GI + +T++ LI+ +C +M +G+ PD +T ++ L
Sbjct: 188 AHADMVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLI 247
Query: 1023 KDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSF 1202
++GN+D A I E M +GC T N ++ G E R + AL ++Q+M + D F
Sbjct: 248 EEGNLDGALRIREQMVEHGCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQF 307
Query: 1203 TYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKM 1379
TY+ L++GLCK G + +A EV EG V T N ++ G + EA+++ ++M
Sbjct: 308 TYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQM 367
Query: 1380 REVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRH 1559
C P+ TY +I + N+V EA + + G D + +GLC
Sbjct: 368 ILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNF 427
Query: 1560 EEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDA 1739
+ ++ ++ KG D Y + I++ + G +++A+ L +M +++G NV Y+
Sbjct: 428 DLAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEM-ESSGCARNVVTYNT 486
Query: 1740 LLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRG 1919
L+ G CK KR++EA ++ + M I TYN LI +++DA QL D + G
Sbjct: 487 LIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 546
Query: 1920 IRP 1928
++P
Sbjct: 547 LKP 549
Score = 192 bits (488), Expect = 6e-48
Identities = 124/462 (26%), Positives = 222/462 (48%), Gaps = 4/462 (0%)
Frame = +3
Query: 549 GYAHNPETYSAIFTILV---RAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGM 719
G N Y+ + +LV + K+ + A A M +G + S FN+++K
Sbjct: 161 GLEPNTHFYNHLLNVLVDGNKLKLVETAHADMVS----RGIKPDVSTFNILIKALCKAHQ 216
Query: 720 ISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSH 899
I A+ M ++M G P F +M+GL++ +L+ + +QM E G T +
Sbjct: 217 IRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGCLVTNVTVNV 276
Query: 900 LIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNG 1079
L+ C +M++ G PD + Y +++ LCK G++ +A E++++M G
Sbjct: 277 LVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEG 336
Query: 1080 CNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAK 1259
+P+ FTYN++I GL + A+E L +M + ++ TY+ LI LCK + +A
Sbjct: 337 FDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEAT 396
Query: 1260 EVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLH 1436
E+ +++G L V T N +++G N AM+L+ +M+ GC PD +TY ++I
Sbjct: 397 ELARVLTSKGILPDVCTFNSLIQGLCLTSNFDLAMELFQEMKTKGCQPDEFTYNMLIDSL 456
Query: 1437 LRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDA 1616
+ EAL + EM +G + + G C++ R EE + + +G+S ++
Sbjct: 457 CSRGMLEEALKLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNS 516
Query: 1617 SDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLN 1796
Y I+ ++DA ++ MI G +P+ Y++LL C+ +K A D++
Sbjct: 517 VTYNTLIDGLCKSRRVEDAAQLMDQMI-MEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQ 575
Query: 1797 SMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
+M + EP TY LI G+++ A +L +GI
Sbjct: 576 NMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRSIQMKGI 617
Score = 182 bits (462), Expect = 2e-44
Identities = 118/436 (27%), Positives = 206/436 (47%), Gaps = 2/436 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
++A + ++EM S +GF + +N +V G G + ALE+ M G P + +N+
Sbjct: 288 EDALSFIQEMVS-EGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNS 346
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
++ GL + ++E + QM N TY+ LI +C + + G
Sbjct: 347 LISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEATELARVLTSKG 406
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC N D A E+ + M+ GC P+ FTYN +I L + + AL
Sbjct: 407 ILPDVCTFNSLIQGLCLTSNFDLAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEAL 466
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
+ L++ME ++ TY+ LIDG CK + +A+E+F E +G +SVT N ++ G
Sbjct: 467 KLLKEMESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGL 526
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ + +A +L D+M G PD +TY ++ + R ++ A I M NG + D
Sbjct: 527 CKSRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDI 586
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR E + ++ KG+ Y I A +A+ +
Sbjct: 587 VTYGTLIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFRE 646
Query: 1692 MIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
M++ P+ Y + +GLC + EA D + M+ P+ +++ +L + +SL
Sbjct: 647 MMEKAD-PPDALTYKHVFRGLCNGGGPIGEAVDFVIEMLGRGFLPEFSSFYMLAEGLVSL 705
Query: 1869 GQLQDAEQLYDFAMQR 1916
G+ + +L D M +
Sbjct: 706 GKEETLVELIDMVMDK 721
Score = 121 bits (303), Expect = 1e-24
Identities = 94/387 (24%), Positives = 169/387 (43%), Gaps = 1/387 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T++++ L FD A + +EM++ KG + + +N+++ GM+ AL++ ++
Sbjct: 413 TFNSLIQGLCLTSNFDLAMELFQEMKT-KGCQPDEFTYNMLIDSLCSRGMLEEALKLLKE 471
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M++ G ++ +N ++ G + +E + + +ME GI N TY+ LI +C
Sbjct: 472 MESSGCARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRR 531
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
MI G+KPD + Y +++ C+ G+I +A +IV+ M +NGC P+ TY
Sbjct: 532 VEDAAQLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGT 591
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL R ++A + L+ ++ I Y+ +I L
Sbjct: 592 LIGGLCKAGRVEVASKLLRSIQMKGIVLTPQAYNPVIQAL-------------------- 631
Query: 1290 QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYR-IIIGLHLRHNEVLEAL 1466
R K EAM+L+ +M E PD TY+ + GL + EA+
Sbjct: 632 --------------FRRKRTTEAMRLFREMMEKADPPDALTYKHVFRGLCNGGGPIGEAV 677
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAF 1646
EM G + +A+GL +G+ E M+ +K D + F
Sbjct: 678 DFVIEMLGRGFLPEFSSFYMLAEGLVSLGKEETLVELIDMVMDKAKFSDRET--SMVRGF 735
Query: 1647 ATLGEMDDAIVFLNDMIDTTGRRPNVT 1727
+ + DA+ D++D+ R P T
Sbjct: 736 LKIRKFQDALATFGDILDS--RMPRKT 760
Score = 102 bits (254), Expect = 1e-18
Identities = 84/376 (22%), Positives = 153/376 (40%), Gaps = 2/376 (0%)
Frame = +3
Query: 813 QSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIY 992
Q D+ +++ ++ N + Y L+ + DM G +
Sbjct: 72 QRDESSALRLFTWASKQPNFAPNSSLYEELLTKLGKVGAFDSMRRILEDMKLSGCQIRTG 131
Query: 993 NYTIVISALCKDGNIDKACEIVELMRNN-GCNPNGFTYNAIIRGLYNEKRPDLALEWLQK 1169
+ I + + K ++ E+ +LM+++ G PN YN ++ L + + L
Sbjct: 132 TFLIFVESYAKFDMYNEILEVTQLMKDDFGLEPNTHFYNHLLNVLVDGNKLKLVETAHAD 191
Query: 1170 MEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLREKN 1346
M I D T++ILI LCK+ + A + E G T +++G + E N
Sbjct: 192 MVSRGIKPDVSTFNILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGN 251
Query: 1347 DYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKK 1526
A+++ ++M E GC+ T +++
Sbjct: 252 LDGALRIREQMVEHGCLVTNVTVNVLV--------------------------------- 278
Query: 1527 MAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTT 1706
G C+ GR E+ F + + +G + D Y +N +G + A+ + DM+
Sbjct: 279 --HGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVM-DMMLQE 335
Query: 1707 GRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDA 1886
G P+V Y++L+ GLCK ++EA ++LN MI + P TYN LI Q+++A
Sbjct: 336 GFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEEA 395
Query: 1887 EQLYDFAMQRGIRPSI 1934
+L +GI P +
Sbjct: 396 TELARVLTSKGILPDV 411
>XP_010037855.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Eucalyptus grandis] KCW49635.1
hypothetical protein EUGRSUZ_K03156 [Eucalyptus grandis]
Length = 766
Score = 227 bits (578), Expect = 5e-60
Identities = 137/490 (27%), Positives = 234/490 (47%), Gaps = 2/490 (0%)
Frame = +3
Query: 465 PLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEM 644
P + LR Q D R F WA + +A P Y + L + FD R +++EM
Sbjct: 58 PQQLLDALRRQSDETAAFRIFDWASKQPNFAPTPSVYQELLRKLAKVGSFDSMRRVLDEM 117
Query: 645 ESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMK-NLGHKPSLGAFNAVMKGLVQSD 821
+ + G E+ F + V+ Y + + + M+ G KP +N ++ LV +
Sbjct: 118 K-LAGGEVGTGSFLIFVESYANFDLFDEIPGVVEMMEAEYGTKPDTHFYNFLLNVLVDGN 176
Query: 822 DLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYT 1001
L++++ H M GI + +T++ LI+ +C +M N+G+ PD +T
Sbjct: 177 KLKLVETAHSGMVSRGIEPDVSTFNILIKALCKAHQIRPAMLLMEEMPNYGLSPDEKTFT 236
Query: 1002 IVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQD 1181
++ + GN+D A I E M GC+ G T N +I GL E R AL+++Q+M +
Sbjct: 237 TLMQGYIEQGNLDAALSIKEHMVVAGCSATGVTVNVLINGLCREGRIVEALDFIQQMSSE 296
Query: 1182 NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEA 1358
D FT++ L++GLCK G + A E+ EG V T N ++ G R EA
Sbjct: 297 GFYPDQFTFNTLVNGLCKGGHVKHALEIMDLMLQEGFDPDVFTYNSLISGLCRIGEVDEA 356
Query: 1359 MKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKG 1538
++L ++M C P+ TY +I + N+V EA + + G D + +G
Sbjct: 357 VELLEQMVSRDCSPNTVTYNTLISTLCKENQVEEATGLARVLTSKGILPDVCTFNSLIQG 416
Query: 1539 LCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRP 1718
LC H ++ ++ KG D Y + I++F + G++++A+ + +M + G
Sbjct: 417 LCMTRNHRTAMELFEEMKSKGCQPDEFTYNMLIDSFCSRGKLEEALGLMKEM-ELNGCAR 475
Query: 1719 NVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQLY 1898
NV IY+ L+ G CK K++KEA ++ + M I TYN LI ++++A +L
Sbjct: 476 NVVIYNTLMDGFCKNKKIKEAEEIFDQMELQGISRNSVTYNTLIDGLCKNRRVEEAAELM 535
Query: 1899 DFAMQRGIRP 1928
D + G++P
Sbjct: 536 DQMIMEGLKP 545
Score = 196 bits (497), Expect = 4e-49
Identities = 123/464 (26%), Positives = 226/464 (48%), Gaps = 6/464 (1%)
Frame = +3
Query: 552 YAHNPET--YSAIFTILV---RAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEG 716
Y P+T Y+ + +LV + K+ + A + M +G E S FN+++K
Sbjct: 156 YGTKPDTHFYNFLLNVLVDGNKLKLVETAHSGMVS----RGIEPDVSTFNILIKALCKAH 211
Query: 717 MISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYS 896
I A+ + ++M N G P F +M+G ++ +L+ + + M G T +
Sbjct: 212 QIRPAMLLMEEMPNYGLSPDEKTFTTLMQGYIEQGNLDAALSIKEHMVVAGCSATGVTVN 271
Query: 897 HLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNN 1076
LI +C M + G PD + + +++ LCK G++ A EI++LM
Sbjct: 272 VLINGLCREGRIVEALDFIQQMSSEGFYPDQFTFNTLVNGLCKGGHVKHALEIMDLMLQE 331
Query: 1077 GCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKA 1256
G +P+ FTYN++I GL D A+E L++M + ++ TY+ LI LCK + +A
Sbjct: 332 GFDPDVFTYNSLISGLCRIGEVDEAVELLEQMVSRDCSPNTVTYNTLISTLCKENQVEEA 391
Query: 1257 KEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGL 1433
+ +++G L V T N +++G +N AM+L+++M+ GC PD +TY ++I
Sbjct: 392 TGLARVLTSKGILPDVCTFNSLIQGLCMTRNHRTAMELFEEMKSKGCQPDEFTYNMLIDS 451
Query: 1434 HLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYD 1613
++ EAL + EM NG + + + G C+ + +E + + +G+S +
Sbjct: 452 FCSRGKLEEALGLMKEMELNGCARNVVIYNTLMDGFCKNKKIKEAEEIFDQMELQGISRN 511
Query: 1614 ASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDML 1793
+ Y I+ +++A ++ MI G +P+ Y++LL CKQ +K+A D++
Sbjct: 512 SVTYNTLIDGLCKNRRVEEAAELMDQMI-MEGLKPDKFTYNSLLTYFCKQGDIKKAADIV 570
Query: 1794 NSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGIR 1925
+M + EP TY LI G+++ A +L +G++
Sbjct: 571 QTMTSNGCEPDIVTYGTLIGGLCKAGRVEVARKLLRTVQMKGMK 614
Score = 170 bits (430), Expect = 2e-40
Identities = 117/449 (26%), Positives = 207/449 (46%), Gaps = 2/449 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T + + L R EA +++M S +GF + FN +V G G + ALE+
Sbjct: 269 TVNVLINGLCREGRIVEALDFIQQMSS-EGFYPDQFTFNTLVNGLCKGGHVKHALEIMDL 327
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M G P + +N+++ GL + +++ L +QM N TY+ LI +C
Sbjct: 328 MLQEGFDPDVFTYNSLISGLCRIGEVDEAVELLEQMVSRDCSPNTVTYNTLISTLCKENQ 387
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+ + GI PD+ + +I LC N A E+ E M++ GC P+ FTYN
Sbjct: 388 VEEATGLARVLTSKGILPDVCTFNSLIQGLCMTRNHRTAMELFEEMKSKGCQPDEFTYNM 447
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I + + + AL +++ME + ++ Y+ L+DG CK+ + +A+E+F + +G
Sbjct: 448 LIDSFCSRGKLEEALGLMKEMELNGCARNVVIYNTLMDGFCKNKKIKEAEEIFDQMELQG 507
Query: 1290 -QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
+SVT N ++ G + + EA +L D+M G PD +TY ++ + ++ +A
Sbjct: 508 ISRNSVTYNTLIDGLCKNRRVEEAAELMDQMIMEGLKPDKFTYNSLLTYFCKQGDIKKAA 567
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAF 1646
I M NG + D + GLC+ GR E + ++ KG+ Y I A
Sbjct: 568 DIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVARKLLRTVQMKGMKLTPQSYNPVIQAL 627
Query: 1647 ATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEP 1823
+A+ +M++ G P+ Y + +GLC R+ EA D + M E+ P
Sbjct: 628 FKRRRTTEAMRLFREMME-KGDPPDAITYKIVFRGLCNGGGRIGEAVDFVFEMTENGYIP 686
Query: 1824 QPATYNILIKANISLGQLQDAEQLYDFAM 1910
+ +++ L + +L +L + M
Sbjct: 687 EFSSFYQLAEGLCALSMEDTLIKLVELVM 715
Score = 92.8 bits (229), Expect = 1e-15
Identities = 83/375 (22%), Positives = 144/375 (38%), Gaps = 1/375 (0%)
Frame = +3
Query: 813 QSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIY 992
QSD+ +I ++ + Y L+R + +M G +
Sbjct: 68 QSDETAAFRIFDWASKQPNFAPTPSVYQELLRKLAKVGSFDSMRRVLDEMKLAGGEVGTG 127
Query: 993 NYTIVISALCKDGNIDKACEIVELMRNN-GCNPNGFTYNAIIRGLYNEKRPDLALEWLQK 1169
++ I + + D+ +VE+M G P+ YN ++ L + + L
Sbjct: 128 SFLIFVESYANFDLFDEIPGVVEMMEAEYGTKPDTHFYNFLLNVLVDGNKLKLVETAHSG 187
Query: 1170 MEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSVTCNCMLRGYLREKND 1349
M I D T++ILI LCK+ H+ +
Sbjct: 188 MVSRGIEPDVSTFNILIKALCKA---HQIRP----------------------------- 215
Query: 1350 YEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKM 1529
AM L ++M G PD T+ ++ ++ + ALSI M G + +
Sbjct: 216 --AMLLMEEMPNYGLSPDEKTFTTLMQGYIEQGNLDAALSIKEHMVVAGCSATGVTVNVL 273
Query: 1530 AKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTG 1709
GLCR GR E F + + +G D + +N G + A+ ++ M+ G
Sbjct: 274 INGLCREGRIVEALDFIQQMSSEGFYPDQFTFNTLVNGLCKGGHVKHALEIMDLMLQE-G 332
Query: 1710 RRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAE 1889
P+V Y++L+ GLC+ + EA ++L M+ + P TYN LI Q+++A
Sbjct: 333 FDPDVFTYNSLISGLCRIGEVDEAVELLEQMVSRDCSPNTVTYNTLISTLCKENQVEEAT 392
Query: 1890 QLYDFAMQRGIRPSI 1934
L +GI P +
Sbjct: 393 GLARVLTSKGILPDV 407
>XP_017615828.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Gossypium arboreum]
Length = 754
Score = 226 bits (577), Expect = 6e-60
Identities = 133/491 (27%), Positives = 242/491 (49%), Gaps = 3/491 (0%)
Frame = +3
Query: 465 PLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEM 644
P + H LR Q D + LR F WA + + N Y + T L + FD + +++++
Sbjct: 51 PTQLLHTLRRQNDESSALRLFDWASKQPNFIPNLSIYEELLTKLGKLGSFDSIKLILQQV 110
Query: 645 ESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKN-LGHKPSLGAFNAVMKGLVQSD 821
+ G E+ F ++++ Y G+ L + + M+ G KP+ +N ++ LV +
Sbjct: 111 KH-SGCELRTGTFLILIESYAEFGLYDEILHVVELMEGEFGLKPNTHFYNFLLNVLVDGN 169
Query: 822 DLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYT 1001
L++++I H M GI + +T++ LI+ +C+ +M ++G+ PD +T
Sbjct: 170 KLKLVEIAHDGMVSRGIKPDVSTFNILIKALCNAHQIRPAILMMEEMPSYGLAPDEKTFT 229
Query: 1002 IVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKM-EQ 1178
+I +GN+D A M GC T N ++ G E R + AL+++Q+M E
Sbjct: 230 TIIQGFIDEGNMDGALRFRGQMVEAGCPITNVTVNVLVHGFCKEGRVEEALDFIQEMSEN 289
Query: 1179 DNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYLREKNDYE 1355
D D FT+++L++GLCK+GF+ A E+ EG + T N ++ G + E
Sbjct: 290 DGFYPDQFTFNMLVNGLCKAGFVKHALEIMDVMLREGFDPDAFTYNSLISGLCKIGEIEE 349
Query: 1356 AMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAK 1535
A+++ D+M C P+ TY +I + N++ EA + + G D + +
Sbjct: 350 AVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARLLTSKGILPDVCTFNSLIQ 409
Query: 1536 GLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRR 1715
GLC H ++ ++ KG D Y + I++F G++++A+ L +M +++G
Sbjct: 410 GLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEALSLLKEM-ESSGCA 468
Query: 1716 PNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQL 1895
NV Y+ L+ G CK KR++EA ++ + M + TYN LI ++++A QL
Sbjct: 469 RNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGLCKNRRVEEAAQL 528
Query: 1896 YDFAMQRGIRP 1928
D + G++P
Sbjct: 529 MDQMLMEGLKP 539
Score = 177 bits (450), Expect = 5e-43
Identities = 117/460 (25%), Positives = 217/460 (47%), Gaps = 2/460 (0%)
Frame = +3
Query: 549 GYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISM 728
G N Y+ + +LV + M S +G + S FN+++K I
Sbjct: 150 GLKPNTHFYNFLLNVLVDGNKLKLVEIAHDGMVS-RGIKPDVSTFNILIKALCNAHQIRP 208
Query: 729 ALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIR 908
A+ M ++M + G P F +++G + +++ QM E G T + L+
Sbjct: 209 AILMMEEMPSYGLAPDEKTFTTIIQGFIDEGNMDGALRFRGQMVEAGCPITNVTVNVLVH 268
Query: 909 CMCSXXXXXXXXXXXYDMI-NWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCN 1085
C +M N G PD + + ++++ LCK G + A EI+++M G +
Sbjct: 269 GFCKEGRVEEALDFIQEMSENDGFYPDQFTFNMLVNGLCKAGFVKHALEIMDVMLREGFD 328
Query: 1086 PNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEV 1265
P+ FTYN++I GL + A+E L +M + ++ TY+ LI LCK + +A E+
Sbjct: 329 PDAFTYNSLISGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATEL 388
Query: 1266 FLEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLR 1442
+++G L V T N +++G +N A++L+++M+ GC PD +TY ++I
Sbjct: 389 ARLLTSKGILPDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCC 448
Query: 1443 HNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASD 1622
++ EALS+ EM +G + + G C+ R +E + + +GVS ++
Sbjct: 449 RGKLEEALSLLKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVT 508
Query: 1623 YYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSM 1802
Y I+ +++A ++ M+ G +P+ Y++LL C+ +K+A D++ +M
Sbjct: 509 YNTLIDGLCKNRRVEEAAQLMDQML-MEGLKPDKFTYNSLLTYFCRSGDIKKAADIVQTM 567
Query: 1803 IEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
+ EP TY LI G+++ A +L +G+
Sbjct: 568 TSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRTIQMKGM 607
Score = 165 bits (418), Expect = 6e-39
Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 1/420 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
+EA ++EM GF + FN++V G G + ALE+ M G P +N+
Sbjct: 277 EEALDFIQEMSENDGFYPDQFTFNMLVNGLCKAGFVKHALEIMDVMLREGFDPDAFTYNS 336
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
++ GL + ++E + QM N TY+ LI +C + + G
Sbjct: 337 LISGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARLLTSKG 396
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC N A E+ E M+N GC P+ FTYN +I + + AL
Sbjct: 397 ILPDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEAL 456
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
L++ME ++ TY+ LIDG CK+ + +A+E+F E +G +SVT N ++ G
Sbjct: 457 SLLKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGL 516
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ + EA +L D+M G PD +TY ++ R ++ +A I M NG + D
Sbjct: 517 CKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRSGDIKKAADIVQTMTSNGCEPDI 576
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR E + ++ KG+ L +A
Sbjct: 577 VTYGTLIGGLCKAGRVEVASKLLRTIQMKGM-------VLTPHA---------------- 613
Query: 1692 MIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLG 1871
Y+ +++ L ++KR EA + M+E P TY ++ + S G
Sbjct: 614 -------------YNPVIQALFRRKRANEAMRLYREMLEKGDPPDAITYKVIFRGLCSGG 660
Score = 145 bits (366), Expect = 2e-32
Identities = 108/452 (23%), Positives = 196/452 (43%), Gaps = 1/452 (0%)
Frame = +3
Query: 516 LRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMV 695
L F + +G+ + T++ + L +A A +M+ M +GF+ +N ++
Sbjct: 280 LDFIQEMSENDGFYPDQFTFNMLVNGLCKAGFVKHALEIMDVMLR-EGFDPDAFTYNSLI 338
Query: 696 KGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIH 875
G G I A+E+ +M + P+ +N ++ L + + +E L + + GI
Sbjct: 339 SGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARLLTSKGIL 398
Query: 876 GNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEI 1055
+ T++ LI+ +C +M N G +PD + Y ++I + C G +++A +
Sbjct: 399 PDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEALSL 458
Query: 1056 VELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCK 1235
++ M ++GC N TYN +I G KR A E +ME + ++S TY+ LIDGLCK
Sbjct: 459 LKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGLCK 518
Query: 1236 SGFMHKAKEVFLEASAEGQLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTY 1415
+ + EA +L D+M G PD +TY
Sbjct: 519 N----------------------------------RRVEEAAQLMDQMLMEGLKPDKFTY 544
Query: 1416 RIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLRE 1595
++ R ++ +A I M NG + D + GLC+ GR E + ++
Sbjct: 545 NSLLTYFCRSGDIKKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRTIQM 604
Query: 1596 KGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCK-QKRL 1772
KG+ Y I A ++A+ +M++ G P+ Y + +GLC +
Sbjct: 605 KGMVLTPHAYNPVIQALFRRKRANEAMRLYREMLE-KGDPPDAITYKVIFRGLCSGGGPI 663
Query: 1773 KEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
EA D + M E P+ +++ +L + +L
Sbjct: 664 GEAVDFVVEMTEKGFLPEFSSFYMLAEGLCAL 695
Score = 94.7 bits (234), Expect = 2e-16
Identities = 80/341 (23%), Positives = 152/341 (44%), Gaps = 16/341 (4%)
Frame = +3
Query: 960 MINWGIK-----PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIR-- 1118
+ +W K P++ Y +++ L K G+ D I++ ++++GC T+ +I
Sbjct: 70 LFDWASKQPNFIPNLSIYEELLTKLGKLGSFDSIKLILQQVKHSGCELRTGTFLILIESY 129
Query: 1119 ---GLYNEKRPDLALEWLQKMEQD-----NIPKDSFTYSILIDGLCKSGFMHKAKEVFLE 1274
GLY+E L ++ ME + N +F ++L+DG K + A + +
Sbjct: 130 AEFGLYDE-----ILHVVELMEGEFGLKPNTHFYNFLLNVLVDGN-KLKLVEIAHDGMVS 183
Query: 1275 ASAEGQLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEV 1454
+ +S T N +++ A+ + ++M G PD T+ II + +
Sbjct: 184 RGIKPDVS--TFNILIKALCNAHQIRPAILMMEEMPSYGLAPDEKTFTTIIQGFIDEGNM 241
Query: 1455 LEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSY-DASDYYL 1631
AL +M + G + + + G C+ GR EE F + + E Y D + +
Sbjct: 242 DGALRFRGQMVEAGCPITNVTVNVLVHGFCKEGRVEEALDFIQEMSENDGFYPDQFTFNM 301
Query: 1632 AINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEH 1811
+N G + A+ ++ M+ G P+ Y++L+ GLCK ++EA ++L+ M+
Sbjct: 302 LVNGLCKAGFVKHALEIMDVML-REGFDPDAFTYNSLISGLCKIGEIEEAVEVLDQMVSR 360
Query: 1812 EIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGIRPSI 1934
+ P TYN LI Q+++A +L +GI P +
Sbjct: 361 DCSPNTVTYNTLISTLCKENQIEEATELARLLTSKGILPDV 401
>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U10 In Complex With Its Target Rna U10
Length = 460
Score = 218 bits (554), Expect = 3e-59
Identities = 125/421 (29%), Positives = 217/421 (51%), Gaps = 1/421 (0%)
Frame = +3
Query: 627 AMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAVMKG 806
A+++E G + + ++ G ALE+F +++ G P++ +N ++ G
Sbjct: 1 ALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDG 60
Query: 807 LVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPD 986
L ++ L+ L ++M E GI + TY+ LI +C +M+ GIKPD
Sbjct: 61 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 120
Query: 987 IYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQ 1166
+ Y +I LCK G +D+A ++ E M G P+ TYN +I GL + D AL+ +
Sbjct: 121 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 180
Query: 1167 KMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYLREK 1343
+M + I D TY+ LIDGLCK+G + +A ++F E +G + VT N ++ G +
Sbjct: 181 EMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 240
Query: 1344 NDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLK 1523
EA+KL+++M E G PD TY +I + ++ EAL ++ EM + G D
Sbjct: 241 KLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYN 300
Query: 1524 KMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDT 1703
+ GLC+ G+ +E ++ + EKG+ D Y I+ G++D+A+ +M++
Sbjct: 301 TLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE- 359
Query: 1704 TGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQD 1883
G +P+V Y+ L+ GLCK +L EA + M+E I+P TY ++++ + ++
Sbjct: 360 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEE 419
Query: 1884 A 1886
A
Sbjct: 420 A 420
Score = 212 bits (540), Expect = 3e-57
Identities = 122/390 (31%), Positives = 203/390 (52%), Gaps = 1/390 (0%)
Frame = +3
Query: 762 GHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXX 941
G + + A+ V+ L ++ E L ++ G+ TY+ LI +C
Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70
Query: 942 XXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRG 1121
+M+ GIKPD+ Y +I LCK G +D+A ++ E M G P+ TYN +I G
Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Query: 1122 LYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLS 1298
L + D AL+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G +
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 1299 SVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYH 1478
VT N ++ G + EA+KL+++M E G PD TY +I + ++ EAL ++
Sbjct: 191 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 250
Query: 1479 EMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLG 1658
EM + G D + GLC+ G+ +E ++ + EKG+ D Y I+ G
Sbjct: 251 EMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 310
Query: 1659 EMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATY 1838
++D+A+ +M++ G +P+V Y+ L+ GLCK +L EA + M+E I+P TY
Sbjct: 311 KLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 369
Query: 1839 NILIKANISLGQLQDAEQLYDFAMQRGIRP 1928
N LI G+L +A +L++ +++GI+P
Sbjct: 370 NTLIDGLCKAGKLDEALKLFEEMVEKGIKP 399
Score = 200 bits (508), Expect = 8e-53
Identities = 120/388 (30%), Positives = 200/388 (51%), Gaps = 1/388 (0%)
Frame = +3
Query: 543 REGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMI 722
R+G A TY+ + L +A DEA + EEM KG + +N ++ G G +
Sbjct: 44 RQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKL 102
Query: 723 SMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHL 902
AL++F++M G KP + +N ++ GL ++ L+ L ++M E GI + TY+ L
Sbjct: 103 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 162
Query: 903 IRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGC 1082
I +C +M+ GIKPD+ Y +I LCK G +D+A ++ E M G
Sbjct: 163 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 222
Query: 1083 NPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKE 1262
P+ TYN +I GL + D AL+ ++M + I D TY+ LIDGLCK+G + +A +
Sbjct: 223 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALK 282
Query: 1263 VFLEASAEG-QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHL 1439
+F E +G + VT N ++ G + EA+KL+++M E G PD TY +I
Sbjct: 283 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 342
Query: 1440 RHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDAS 1619
+ ++ EAL ++ EM + G D + GLC+ G+ +E ++ + EKG+ D
Sbjct: 343 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDEL 402
Query: 1620 DYYLAINAFATLGEMDDAIVFLNDMIDT 1703
Y + ++ ++A FL+++ +T
Sbjct: 403 TYRRVVESYCRAKRFEEARGFLSEVSET 430
Score = 194 bits (492), Expect = 1e-50
Identities = 114/353 (32%), Positives = 187/353 (52%), Gaps = 6/353 (1%)
Frame = +3
Query: 972 GIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLA 1151
G+ P + Y +I LCK G +D+A ++ E M G P+ TYN +I GL + D A
Sbjct: 46 GVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 105
Query: 1152 LEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRG 1328
L+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G + VT N ++ G
Sbjct: 106 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 165
Query: 1329 YLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLD 1508
+ EA+KL+++M E G PD TY +I + ++ EAL ++ EM + G D
Sbjct: 166 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 225
Query: 1509 TPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLN 1688
+ GLC+ G+ +E ++ + EKG+ D Y I+ G++D+A+
Sbjct: 226 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 285
Query: 1689 DMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
+M++ G +P+V Y+ L+ GLCK +L EA + M+E I+P TYN LI
Sbjct: 286 EMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 344
Query: 1869 GQLQDAEQLYDFAMQRGIRPSIKPVAEEPEYLLK-----EYVKSQEEMVAMSV 2012
G+L +A +L++ +++GI+P + + L K E +K EEMV +
Sbjct: 345 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 397
Score = 187 bits (474), Expect = 4e-48
Identities = 113/353 (32%), Positives = 186/353 (52%), Gaps = 6/353 (1%)
Frame = +3
Query: 972 GIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLA 1151
G + D+ YT V+ AL + G ++A E+ +R G P TYN +I GL + D A
Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70
Query: 1152 LEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRG 1328
L+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G + VT N ++ G
Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Query: 1329 YLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLD 1508
+ EA+KL+++M E G PD TY +I + ++ EAL ++ EM + G D
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 1509 TPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLN 1688
+ GLC+ G+ +E ++ + EKG+ D Y I+ G++D+A+
Sbjct: 191 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 250
Query: 1689 DMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
+M++ G +P+V Y+ L+ GLCK +L EA + M+E I+P TYN LI
Sbjct: 251 EMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 309
Query: 1869 GQLQDAEQLYDFAMQRGIRPSIKPVAEEPEYLLK-----EYVKSQEEMVAMSV 2012
G+L +A +L++ +++GI+P + + L K E +K EEMV +
Sbjct: 310 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 362
Score = 186 bits (471), Expect = 1e-47
Identities = 112/349 (32%), Positives = 181/349 (51%), Gaps = 1/349 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
TY+ + L +A DEA + EEM KG + +N ++ G G + AL++F++
Sbjct: 88 TYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 146
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M G KP + +N ++ GL ++ L+ L ++M E GI + TY+ LI +C
Sbjct: 147 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 206
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+M+ GIKPD+ Y +I LCK G +D+A ++ E M G P+ TYN
Sbjct: 207 LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNT 266
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL + D AL+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G
Sbjct: 267 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 326
Query: 1290 -QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
+ VT N ++ G + EA+KL+++M E G PD TY +I + ++ EAL
Sbjct: 327 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL 386
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYD 1613
++ EM + G D +++ + CR R EE GF + E + +D
Sbjct: 387 KLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Score = 169 bits (428), Expect = 7e-42
Identities = 103/319 (32%), Positives = 164/319 (51%), Gaps = 1/319 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
TY+ + L +A DEA + EEM KG + +N ++ G G + AL++F++
Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 181
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M G KP + +N ++ GL ++ L+ L ++M E GI + TY+ LI +C
Sbjct: 182 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 241
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+M+ GIKPD+ Y +I LCK G +D+A ++ E M G P+ TYN
Sbjct: 242 LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNT 301
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL + D AL+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G
Sbjct: 302 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 361
Query: 1290 -QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
+ VT N ++ G + EA+KL+++M E G PD TYR ++ + R EA
Sbjct: 362 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEAR 421
Query: 1467 SIYHEMRKNGSDLDTPLLK 1523
E+ + D D L+
Sbjct: 422 GFLSEVSETDLDFDKKALE 440
>XP_012459090.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Gossypium raimondii] KJB76699.1
hypothetical protein B456_012G101800 [Gossypium
raimondii]
Length = 753
Score = 224 bits (571), Expect = 4e-59
Identities = 134/491 (27%), Positives = 239/491 (48%), Gaps = 3/491 (0%)
Frame = +3
Query: 465 PLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEM 644
P + H LR Q D + LR F WA + + N Y + T L + FD + +++++
Sbjct: 50 PTQLLHTLRRQNDESSALRLFDWASKQPNFTPNLSIYEELLTKLGKLGSFDSIKLILQQV 109
Query: 645 ESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKN-LGHKPSLGAFNAVMKGLVQSD 821
+ G E+ F ++++ Y G+ L + + M+ G K +N ++ LV +
Sbjct: 110 KH-SGCELRTGTFLILIESYAEFGLYDEILHVVELMEGEFGLKADTHFYNFLLNVLVDGN 168
Query: 822 DLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYT 1001
L++++I H M GI + +T++ LI+ +CS +M ++G+ PD +T
Sbjct: 169 KLKLVEIAHDGMVSRGIKPDVSTFNILIKALCSAHQIRPAILMMEEMPSYGLAPDEKTFT 228
Query: 1002 IVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKM-EQ 1178
+I +GN+D A M GC T N ++ G E R + AL+++Q+M E
Sbjct: 229 TIIQGFIDEGNMDGALRFRGQMVEAGCPITNVTVNVLVHGFCKEGRVEEALDFIQEMSEN 288
Query: 1179 DNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYE 1355
D D FT++ L++GLCK+GF+ A E+ EG V T N ++ G + E
Sbjct: 289 DGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLREGFDPDVFTYNSLISGLCKIGEIEE 348
Query: 1356 AMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAK 1535
A+++ D+M C P+ TY +I + N++ EA + + G D + +
Sbjct: 349 AVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 1536 GLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRR 1715
GLC H ++ ++ KG D Y + I++F G++++A+ L +M +++G
Sbjct: 409 GLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEALSLLKEM-ESSGCA 467
Query: 1716 PNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQL 1895
NV Y+ L+ G CK KR++EA ++ + M + TYN LI ++++A QL
Sbjct: 468 RNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGLCKNRRVEEAAQL 527
Query: 1896 YDFAMQRGIRP 1928
D + G++P
Sbjct: 528 MDQMLMEGLKP 538
Score = 175 bits (444), Expect = 3e-42
Identities = 115/452 (25%), Positives = 215/452 (47%), Gaps = 2/452 (0%)
Frame = +3
Query: 573 YSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKM 752
Y+ + +LV + M S +G + S FN+++K I A+ M ++M
Sbjct: 157 YNFLLNVLVDGNKLKLVEIAHDGMVS-RGIKPDVSTFNILIKALCSAHQIRPAILMMEEM 215
Query: 753 KNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXX 932
+ G P F +++G + +++ QM E G T + L+ C
Sbjct: 216 PSYGLAPDEKTFTTIIQGFIDEGNMDGALRFRGQMVEAGCPITNVTVNVLVHGFCKEGRV 275
Query: 933 XXXXXXXYDMI-NWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+M N G PD + + +++ LCK G ++ A EI+++M G +P+ FTYN+
Sbjct: 276 EEALDFIQEMSENDGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLREGFDPDVFTYNS 335
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL + A+E L +M + ++ TY+ LI LCK + +A E+ +++G
Sbjct: 336 LISGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKG 395
Query: 1290 QLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
L V T N +++G +N A++L+++M+ GC PD +TY ++I ++ EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEAL 455
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAF 1646
S+ EM +G + + G C+ R +E + + +GVS ++ Y I+
Sbjct: 456 SLLKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGL 515
Query: 1647 ATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQ 1826
+++A ++ M+ G +P+ Y++LL C+ +K+A D++ +M + EP
Sbjct: 516 CKNRRVEEAAQLMDQML-MEGLKPDKFTYNSLLTYFCRSGDIKKAADIVQTMTSNGCEPD 574
Query: 1827 PATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
TY LI G+++ A +L +G+
Sbjct: 575 IVTYGTLIGGLCKAGRVEVASKLLRTIQMKGM 606
Score = 166 bits (420), Expect = 3e-39
Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 1/420 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
+EA ++EM GF + FN +V G G + ALE+ M G P + +N+
Sbjct: 276 EEALDFIQEMSENDGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLREGFDPDVFTYNS 335
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
++ GL + ++E + QM N TY+ LI +C + + G
Sbjct: 336 LISGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKG 395
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC N A E+ E M+N GC P+ FTYN +I + + AL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEAL 455
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
L++ME ++ TY+ LIDG CK+ + +A+E+F E +G +SVT N ++ G
Sbjct: 456 SLLKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGL 515
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ + EA +L D+M G PD +TY ++ R ++ +A I M NG + D
Sbjct: 516 CKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRSGDIKKAADIVQTMTSNGCEPDI 575
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR E + ++ KG+ L +A
Sbjct: 576 VTYGTLIGGLCKAGRVEVASKLLRTIQMKGM-------VLTPHA---------------- 612
Query: 1692 MIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLG 1871
Y+ +++ L ++KR EA + M+E P TY ++ + S G
Sbjct: 613 -------------YNPVIQALFRRKRANEAMRLYREMLEKGDPPDAITYKVIFRGLCSGG 659
Score = 165 bits (418), Expect = 6e-39
Identities = 126/492 (25%), Positives = 218/492 (44%), Gaps = 2/492 (0%)
Frame = +3
Query: 459 LDPLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMME 638
L+ LV + L+ E A+ G+ G + T++ + L A A MME
Sbjct: 161 LNVLVDGNKLKLVEIAHDGM-------VSRGIKPDVSTFNILIKALCSAHQIRPAILMME 213
Query: 639 EMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQS 818
EM S G + F +++G+ EG + AL +M G + N ++ G +
Sbjct: 214 EMPSY-GLAPDEKTFTTIIQGFIDEGNMDGALRFRGQMVEAGCPITNVTVNVLVHGFCKE 272
Query: 819 DDLE-VMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYN 995
+E + + + E G + ++ T++ L+ +C M+ G PD++
Sbjct: 273 GRVEEALDFIQEMSENDGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLREGFDPDVFT 332
Query: 996 YTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKME 1175
Y +IS LCK G I++A E+++ M + C+PN TYN +I L E + + A E + +
Sbjct: 333 YNSLISGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARVLT 392
Query: 1176 QDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYLREKNDY 1352
I D T++ LI GLC + A E+F E +G Q T N ++ +
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLE 452
Query: 1353 EAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMA 1532
EA+ L +M GC + TY +I ++ + EA I+ EM G ++ +
Sbjct: 453 EALSLLKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLI 512
Query: 1533 KGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGR 1712
GLC+ R EE + +G+ D Y + F G++ A + M + G
Sbjct: 513 DGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRSGDIKKAADIVQTMT-SNGC 571
Query: 1713 RPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQ 1892
P++ Y L+ GLCK R++ A +L ++ + P YN +I+A + +A +
Sbjct: 572 EPDIVTYGTLIGGLCKAGRVEVASKLLRTIQMKGMVLTPHAYNPVIQALFRRKRANEAMR 631
Query: 1893 LYDFAMQRGIRP 1928
LY +++G P
Sbjct: 632 LYREMLEKGDPP 643
Score = 146 bits (369), Expect = 9e-33
Identities = 108/452 (23%), Positives = 197/452 (43%), Gaps = 1/452 (0%)
Frame = +3
Query: 516 LRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMV 695
L F + +G+ + T++ + L +A + A +M+ M +GF+ +N ++
Sbjct: 279 LDFIQEMSENDGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLR-EGFDPDVFTYNSLI 337
Query: 696 KGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIH 875
G G I A+E+ +M + P+ +N ++ L + + +E L + + GI
Sbjct: 338 SGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKGIL 397
Query: 876 GNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEI 1055
+ T++ LI+ +C +M N G +PD + Y ++I + C G +++A +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEALSL 457
Query: 1056 VELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCK 1235
++ M ++GC N TYN +I G KR A E +ME + ++S TY+ LIDGLCK
Sbjct: 458 LKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGLCK 517
Query: 1236 SGFMHKAKEVFLEASAEGQLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTY 1415
+ + EA +L D+M G PD +TY
Sbjct: 518 N----------------------------------RRVEEAAQLMDQMLMEGLKPDKFTY 543
Query: 1416 RIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLRE 1595
++ R ++ +A I M NG + D + GLC+ GR E + ++
Sbjct: 544 NSLLTYFCRSGDIKKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRTIQM 603
Query: 1596 KGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCK-QKRL 1772
KG+ Y I A ++A+ +M++ G P+ Y + +GLC +
Sbjct: 604 KGMVLTPHAYNPVIQALFRRKRANEAMRLYREMLE-KGDPPDAITYKVIFRGLCSGGGPI 662
Query: 1773 KEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
EA D + M E P+ +++ +L + +L
Sbjct: 663 GEAVDFVVEMTEKGFLPEFSSFYMLAEGLCAL 694
Score = 96.3 bits (238), Expect = 8e-17
Identities = 81/343 (23%), Positives = 153/343 (44%), Gaps = 18/343 (5%)
Frame = +3
Query: 960 MINWGIK-----PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIR-- 1118
+ +W K P++ Y +++ L K G+ D I++ ++++GC T+ +I
Sbjct: 69 LFDWASKQPNFTPNLSIYEELLTKLGKLGSFDSIKLILQQVKHSGCELRTGTFLILIESY 128
Query: 1119 ---GLYNEKRPDLALEWLQKMEQD-NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAE 1286
GLY+E L ++ ME + + D+ Y+ L++ L K +E + +
Sbjct: 129 AEFGLYDE-----ILHVVELMEGEFGLKADTHFYNFLLNVLVDGN-----KLKLVEIAHD 178
Query: 1287 GQLSS------VTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHN 1448
G +S T N +++ A+ + ++M G PD T+ II +
Sbjct: 179 GMVSRGIKPDVSTFNILIKALCSAHQIRPAILMMEEMPSYGLAPDEKTFTTIIQGFIDEG 238
Query: 1449 EVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSY-DASDY 1625
+ AL +M + G + + + G C+ GR EE F + + E Y D +
Sbjct: 239 NMDGALRFRGQMVEAGCPITNVTVNVLVHGFCKEGRVEEALDFIQEMSENDGFYPDQFTF 298
Query: 1626 YLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMI 1805
+N G ++ A+ ++ M+ G P+V Y++L+ GLCK ++EA ++L+ M+
Sbjct: 299 NTLVNGLCKAGFVEHALEIMDVML-REGFDPDVFTYNSLISGLCKIGEIEEAVEVLDQMV 357
Query: 1806 EHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGIRPSI 1934
+ P TYN LI Q+++A +L +GI P +
Sbjct: 358 SRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKGILPDV 400
>XP_016680449.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Gossypium hirsutum]
Length = 753
Score = 224 bits (570), Expect = 5e-59
Identities = 134/491 (27%), Positives = 239/491 (48%), Gaps = 3/491 (0%)
Frame = +3
Query: 465 PLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEM 644
P + H LR Q D + LR F WA + + N Y + T L + FD + +++++
Sbjct: 50 PTQLLHTLRRQNDESSALRLFDWASKQPNFIPNLSIYEELLTKLGKLGSFDSIKLILQQV 109
Query: 645 ESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKN-LGHKPSLGAFNAVMKGLVQSD 821
+ G E+ F ++++ Y G+ L + + M+ G K +N ++ LV +
Sbjct: 110 KH-SGCELRTGTFLILIESYAEFGLYDEILHVVELMEGEFGLKADTHFYNFLLNVLVDGN 168
Query: 822 DLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYT 1001
L++++I H M GI + +T++ LI+ +CS +M ++G+ PD +T
Sbjct: 169 KLKLVEIAHDGMVSRGIKPDVSTFNILIKALCSAHQIRPAILMMEEMPSYGLAPDEKTFT 228
Query: 1002 IVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKM-EQ 1178
+I +GN+D A M GC T N ++ G E R + AL+++Q+M E
Sbjct: 229 TIIQGFIDEGNMDGALRFRGQMVEAGCPITNVTVNVLVHGFCKEGRVEEALDFIQEMSEN 288
Query: 1179 DNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYE 1355
D D FT++ L++GLCK+GF+ A E+ EG V T N ++ G + E
Sbjct: 289 DGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLREGFDPDVFTYNSLISGLCKIGEIEE 348
Query: 1356 AMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAK 1535
A+++ D+M C P+ TY +I + N++ EA + + G D + +
Sbjct: 349 AVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 1536 GLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRR 1715
GLC H ++ ++ KG D Y + I++F G++++A+ L +M +++G
Sbjct: 409 GLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEALSLLKEM-ESSGCA 467
Query: 1716 PNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQL 1895
NV Y+ L+ G CK KR++EA ++ + M + TYN LI ++++A QL
Sbjct: 468 RNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGLCKNRRVEEAAQL 527
Query: 1896 YDFAMQRGIRP 1928
D + G++P
Sbjct: 528 MDQMLMEGLKP 538
Score = 175 bits (444), Expect = 3e-42
Identities = 115/452 (25%), Positives = 215/452 (47%), Gaps = 2/452 (0%)
Frame = +3
Query: 573 YSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKM 752
Y+ + +LV + M S +G + S FN+++K I A+ M ++M
Sbjct: 157 YNFLLNVLVDGNKLKLVEIAHDGMVS-RGIKPDVSTFNILIKALCSAHQIRPAILMMEEM 215
Query: 753 KNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXX 932
+ G P F +++G + +++ QM E G T + L+ C
Sbjct: 216 PSYGLAPDEKTFTTIIQGFIDEGNMDGALRFRGQMVEAGCPITNVTVNVLVHGFCKEGRV 275
Query: 933 XXXXXXXYDMI-NWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+M N G PD + + +++ LCK G ++ A EI+++M G +P+ FTYN+
Sbjct: 276 EEALDFIQEMSENDGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLREGFDPDVFTYNS 335
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL + A+E L +M + ++ TY+ LI LCK + +A E+ +++G
Sbjct: 336 LISGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKG 395
Query: 1290 QLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
L V T N +++G +N A++L+++M+ GC PD +TY ++I ++ EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEAL 455
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAF 1646
S+ EM +G + + G C+ R +E + + +GVS ++ Y I+
Sbjct: 456 SLLKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGL 515
Query: 1647 ATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQ 1826
+++A ++ M+ G +P+ Y++LL C+ +K+A D++ +M + EP
Sbjct: 516 CKNRRVEEAAQLMDQML-MEGLKPDKFTYNSLLTYFCRSGDIKKAADIVQTMTSNGCEPD 574
Query: 1827 PATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
TY LI G+++ A +L +G+
Sbjct: 575 IVTYGTLIGGLCKAGRVEVASKLLRTIQMKGM 606
Score = 166 bits (420), Expect = 3e-39
Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 1/420 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
+EA ++EM GF + FN +V G G + ALE+ M G P + +N+
Sbjct: 276 EEALDFIQEMSENDGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLREGFDPDVFTYNS 335
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
++ GL + ++E + QM N TY+ LI +C + + G
Sbjct: 336 LISGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKG 395
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC N A E+ E M+N GC P+ FTYN +I + + AL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEAL 455
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
L++ME ++ TY+ LIDG CK+ + +A+E+F E +G +SVT N ++ G
Sbjct: 456 SLLKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGL 515
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ + EA +L D+M G PD +TY ++ R ++ +A I M NG + D
Sbjct: 516 CKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRSGDIKKAADIVQTMTSNGCEPDI 575
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR E + ++ KG+ L +A
Sbjct: 576 VTYGTLIGGLCKAGRVEVASKLLRTIQMKGM-------VLTPHA---------------- 612
Query: 1692 MIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLG 1871
Y+ +++ L ++KR EA + M+E P TY ++ + S G
Sbjct: 613 -------------YNPVIQALFRRKRANEAMRLYREMLEKGDPPDAITYKVIFRGLCSGG 659
Score = 165 bits (418), Expect = 6e-39
Identities = 126/492 (25%), Positives = 218/492 (44%), Gaps = 2/492 (0%)
Frame = +3
Query: 459 LDPLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMME 638
L+ LV + L+ E A+ G+ G + T++ + L A A MME
Sbjct: 161 LNVLVDGNKLKLVEIAHDGM-------VSRGIKPDVSTFNILIKALCSAHQIRPAILMME 213
Query: 639 EMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQS 818
EM S G + F +++G+ EG + AL +M G + N ++ G +
Sbjct: 214 EMPSY-GLAPDEKTFTTIIQGFIDEGNMDGALRFRGQMVEAGCPITNVTVNVLVHGFCKE 272
Query: 819 DDLE-VMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYN 995
+E + + + E G + ++ T++ L+ +C M+ G PD++
Sbjct: 273 GRVEEALDFIQEMSENDGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLREGFDPDVFT 332
Query: 996 YTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKME 1175
Y +IS LCK G I++A E+++ M + C+PN TYN +I L E + + A E + +
Sbjct: 333 YNSLISGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARVLT 392
Query: 1176 QDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYLREKNDY 1352
I D T++ LI GLC + A E+F E +G Q T N ++ +
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLE 452
Query: 1353 EAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMA 1532
EA+ L +M GC + TY +I ++ + EA I+ EM G ++ +
Sbjct: 453 EALSLLKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLI 512
Query: 1533 KGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGR 1712
GLC+ R EE + +G+ D Y + F G++ A + M + G
Sbjct: 513 DGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRSGDIKKAADIVQTMT-SNGC 571
Query: 1713 RPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQ 1892
P++ Y L+ GLCK R++ A +L ++ + P YN +I+A + +A +
Sbjct: 572 EPDIVTYGTLIGGLCKAGRVEVASKLLRTIQMKGMVLTPHAYNPVIQALFRRKRANEAMR 631
Query: 1893 LYDFAMQRGIRP 1928
LY +++G P
Sbjct: 632 LYREMLEKGDPP 643
Score = 146 bits (369), Expect = 9e-33
Identities = 108/452 (23%), Positives = 197/452 (43%), Gaps = 1/452 (0%)
Frame = +3
Query: 516 LRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMV 695
L F + +G+ + T++ + L +A + A +M+ M +GF+ +N ++
Sbjct: 279 LDFIQEMSENDGFYPDQFTFNTLVNGLCKAGFVEHALEIMDVMLR-EGFDPDVFTYNSLI 337
Query: 696 KGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIH 875
G G I A+E+ +M + P+ +N ++ L + + +E L + + GI
Sbjct: 338 SGLCKIGEIEEAVEVLDQMVSRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKGIL 397
Query: 876 GNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEI 1055
+ T++ LI+ +C +M N G +PD + Y ++I + C G +++A +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHTLALELFEEMKNKGCQPDEFTYNMLIDSFCCRGKLEEALSL 457
Query: 1056 VELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCK 1235
++ M ++GC N TYN +I G KR A E +ME + ++S TY+ LIDGLCK
Sbjct: 458 LKEMESSGCARNVITYNTLIDGFCKNKRIQEAEEIFDEMELQGVSRNSVTYNTLIDGLCK 517
Query: 1236 SGFMHKAKEVFLEASAEGQLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTY 1415
+ + EA +L D+M G PD +TY
Sbjct: 518 N----------------------------------RRVEEAAQLMDQMLMEGLKPDKFTY 543
Query: 1416 RIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLRE 1595
++ R ++ +A I M NG + D + GLC+ GR E + ++
Sbjct: 544 NSLLTYFCRSGDIKKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASKLLRTIQM 603
Query: 1596 KGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCK-QKRL 1772
KG+ Y I A ++A+ +M++ G P+ Y + +GLC +
Sbjct: 604 KGMVLTPHAYNPVIQALFRRKRANEAMRLYREMLE-KGDPPDAITYKVIFRGLCSGGGPI 662
Query: 1773 KEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
EA D + M E P+ +++ +L + +L
Sbjct: 663 GEAVDFVVEMTEKGFLPEFSSFYMLAEGLCAL 694
Score = 96.3 bits (238), Expect = 8e-17
Identities = 81/343 (23%), Positives = 153/343 (44%), Gaps = 18/343 (5%)
Frame = +3
Query: 960 MINWGIK-----PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIR-- 1118
+ +W K P++ Y +++ L K G+ D I++ ++++GC T+ +I
Sbjct: 69 LFDWASKQPNFIPNLSIYEELLTKLGKLGSFDSIKLILQQVKHSGCELRTGTFLILIESY 128
Query: 1119 ---GLYNEKRPDLALEWLQKMEQD-NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAE 1286
GLY+E L ++ ME + + D+ Y+ L++ L K +E + +
Sbjct: 129 AEFGLYDE-----ILHVVELMEGEFGLKADTHFYNFLLNVLVDGN-----KLKLVEIAHD 178
Query: 1287 GQLSS------VTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHN 1448
G +S T N +++ A+ + ++M G PD T+ II +
Sbjct: 179 GMVSRGIKPDVSTFNILIKALCSAHQIRPAILMMEEMPSYGLAPDEKTFTTIIQGFIDEG 238
Query: 1449 EVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSY-DASDY 1625
+ AL +M + G + + + G C+ GR EE F + + E Y D +
Sbjct: 239 NMDGALRFRGQMVEAGCPITNVTVNVLVHGFCKEGRVEEALDFIQEMSENDGFYPDQFTF 298
Query: 1626 YLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMI 1805
+N G ++ A+ ++ M+ G P+V Y++L+ GLCK ++EA ++L+ M+
Sbjct: 299 NTLVNGLCKAGFVEHALEIMDVML-REGFDPDVFTYNSLISGLCKIGEIEEAVEVLDQMV 357
Query: 1806 EHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGIRPSI 1934
+ P TYN LI Q+++A +L +GI P +
Sbjct: 358 SRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKGILPDV 400
>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
Length = 460
Score = 217 bits (552), Expect = 6e-59
Identities = 125/421 (29%), Positives = 217/421 (51%), Gaps = 1/421 (0%)
Frame = +3
Query: 627 AMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAVMKG 806
A+++E G + + ++ G ALE+F +++ G P++ +N ++ G
Sbjct: 1 ALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDG 60
Query: 807 LVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPD 986
L ++ L+ L ++M E GI + TY+ LI +C +M+ GIKPD
Sbjct: 61 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 120
Query: 987 IYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQ 1166
+ Y +I LCK G +D+A ++ E M G P+ TYN +I GL + D AL+ +
Sbjct: 121 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 180
Query: 1167 KMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYLREK 1343
+M + I D TY+ LIDGLCK+G + +A ++F E +G + S VT N ++ G +
Sbjct: 181 EMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAG 240
Query: 1344 NDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLK 1523
EA+KL+++M E G P TY +I + ++ EAL ++ EM + G D
Sbjct: 241 KLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYN 300
Query: 1524 KMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDT 1703
+ GLC+ G+ +E ++ + EKG+ D Y I+ G++D+A+ +M++
Sbjct: 301 TLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE- 359
Query: 1704 TGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQD 1883
G +P+V Y+ L+ GLCK +L EA + M+E I+P TY ++++ + ++
Sbjct: 360 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEE 419
Query: 1884 A 1886
A
Sbjct: 420 A 420
Score = 207 bits (528), Expect = 1e-55
Identities = 120/390 (30%), Positives = 201/390 (51%), Gaps = 1/390 (0%)
Frame = +3
Query: 762 GHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXX 941
G + + A+ V+ L ++ E L ++ G+ TY+ LI +C
Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70
Query: 942 XXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRG 1121
+M+ GIKPD+ Y +I LCK G +D+A ++ E M G P+ TYN +I G
Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Query: 1122 LYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLS 1298
L + D AL+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G +
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 1299 SVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYH 1478
VT N ++ G + EA+KL+++M E G P TY +I + ++ EAL ++
Sbjct: 191 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFE 250
Query: 1479 EMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLG 1658
EM + G + GLC+ G+ +E ++ + EKG+ D Y I+ G
Sbjct: 251 EMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 310
Query: 1659 EMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATY 1838
++D+A+ +M++ G +P+V Y+ L+ GLCK +L EA + M+E I+P TY
Sbjct: 311 KLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 369
Query: 1839 NILIKANISLGQLQDAEQLYDFAMQRGIRP 1928
N LI G+L +A +L++ +++GI+P
Sbjct: 370 NTLIDGLCKAGKLDEALKLFEEMVEKGIKP 399
Score = 197 bits (502), Expect = 6e-52
Identities = 119/388 (30%), Positives = 199/388 (51%), Gaps = 1/388 (0%)
Frame = +3
Query: 543 REGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMI 722
R+G A TY+ + L +A DEA + EEM KG + +N ++ G G +
Sbjct: 44 RQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKL 102
Query: 723 SMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHL 902
AL++F++M G KP + +N ++ GL ++ L+ L ++M E GI + TY+ L
Sbjct: 103 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 162
Query: 903 IRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGC 1082
I +C +M+ GIKPD+ Y +I LCK G +D+A ++ E M G
Sbjct: 163 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 222
Query: 1083 NPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKE 1262
P+ TYN +I GL + D AL+ ++M + I TY+ LIDGLCK+G + +A +
Sbjct: 223 KPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALK 282
Query: 1263 VFLEASAEG-QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHL 1439
+F E +G + VT N ++ G + EA+KL+++M E G PD TY +I
Sbjct: 283 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 342
Query: 1440 RHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDAS 1619
+ ++ EAL ++ EM + G D + GLC+ G+ +E ++ + EKG+ D
Sbjct: 343 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDEL 402
Query: 1620 DYYLAINAFATLGEMDDAIVFLNDMIDT 1703
Y + ++ ++A FL+++ +T
Sbjct: 403 TYRRVVESYCRAKRFEEARGFLSEVSET 430
Score = 189 bits (480), Expect = 6e-49
Identities = 112/353 (31%), Positives = 185/353 (52%), Gaps = 6/353 (1%)
Frame = +3
Query: 972 GIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLA 1151
G+ P + Y +I LCK G +D+A ++ E M G P+ TYN +I GL + D A
Sbjct: 46 GVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 105
Query: 1152 LEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRG 1328
L+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G + VT N ++ G
Sbjct: 106 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 165
Query: 1329 YLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLD 1508
+ EA+KL+++M E G PD TY +I + ++ EAL ++ EM + G
Sbjct: 166 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPS 225
Query: 1509 TPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLN 1688
+ GLC+ G+ +E ++ + EKG+ Y I+ G++D+A+
Sbjct: 226 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFE 285
Query: 1689 DMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
+M++ G +P+V Y+ L+ GLCK +L EA + M+E I+P TYN LI
Sbjct: 286 EMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 344
Query: 1869 GQLQDAEQLYDFAMQRGIRPSIKPVAEEPEYLLK-----EYVKSQEEMVAMSV 2012
G+L +A +L++ +++GI+P + + L K E +K EEMV +
Sbjct: 345 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 397
Score = 184 bits (468), Expect = 3e-47
Identities = 112/353 (31%), Positives = 185/353 (52%), Gaps = 6/353 (1%)
Frame = +3
Query: 972 GIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLA 1151
G + D+ YT V+ AL + G ++A E+ +R G P TYN +I GL + D A
Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70
Query: 1152 LEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRG 1328
L+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G + VT N ++ G
Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Query: 1329 YLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLD 1508
+ EA+KL+++M E G PD TY +I + ++ EAL ++ EM + G D
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 1509 TPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLN 1688
+ GLC+ G+ +E ++ + EKG+ Y I+ G++D+A+
Sbjct: 191 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFE 250
Query: 1689 DMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
+M++ G +P+V Y+ L+ GLCK +L EA + M+E I+P TYN LI
Sbjct: 251 EMVEK-GIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 309
Query: 1869 GQLQDAEQLYDFAMQRGIRPSIKPVAEEPEYLLK-----EYVKSQEEMVAMSV 2012
G+L +A +L++ +++GI+P + + L K E +K EEMV +
Sbjct: 310 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 362
Score = 183 bits (465), Expect = 7e-47
Identities = 111/349 (31%), Positives = 180/349 (51%), Gaps = 1/349 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
TY+ + L +A DEA + EEM KG + +N ++ G G + AL++F++
Sbjct: 88 TYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 146
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M G KP + +N ++ GL ++ L+ L ++M E GI + TY+ LI +C
Sbjct: 147 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 206
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+M+ GIKP + Y +I LCK G +D+A ++ E M G P+ TYN
Sbjct: 207 LDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNT 266
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL + D AL+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G
Sbjct: 267 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 326
Query: 1290 -QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
+ VT N ++ G + EA+KL+++M E G PD TY +I + ++ EAL
Sbjct: 327 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL 386
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYD 1613
++ EM + G D +++ + CR R EE GF + E + +D
Sbjct: 387 KLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Score = 167 bits (422), Expect = 5e-41
Identities = 102/319 (31%), Positives = 163/319 (51%), Gaps = 1/319 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
TY+ + L +A DEA + EEM KG + +N ++ G G + AL++F++
Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 181
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M G KP + +N ++ GL ++ L+ L ++M E GI + TY+ LI +C
Sbjct: 182 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGK 241
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+M+ GIKP + Y +I LCK G +D+A ++ E M G P+ TYN
Sbjct: 242 LDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNT 301
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL + D AL+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G
Sbjct: 302 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 361
Query: 1290 -QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
+ VT N ++ G + EA+KL+++M E G PD TYR ++ + R EA
Sbjct: 362 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEAR 421
Query: 1467 SIYHEMRKNGSDLDTPLLK 1523
E+ + D D L+
Sbjct: 422 GFLSEVSETDLDFDKKALE 440
>XP_015889101.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Ziziphus jujuba]
Length = 756
Score = 223 bits (568), Expect = 1e-58
Identities = 135/485 (27%), Positives = 234/485 (48%), Gaps = 2/485 (0%)
Frame = +3
Query: 480 HVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKG 659
H LR Q D + LR F+WA + + N Y + L + F+ R ++EEM+ + G
Sbjct: 59 HTLRRQHDESSALRIFQWASRQPNFVPNSYVYEELLRKLAKVGSFESMRGVLEEMK-LAG 117
Query: 660 FEIPKSVFNVMVKGYGYEGMISMALEMFQKMKN-LGHKPSLGAFNAVMKGLVQSDDLEVM 836
+I F + V+ Y + L + + M+N G KP FN ++ LV + L+++
Sbjct: 118 CKISGGTFLIFVESYSKFDLHDEILGILEVMENEFGVKPDTHFFNFLLNVLVDGNKLKLV 177
Query: 837 QILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISA 1016
+ H M GI + +T++ LI+ +C +M ++G+ PD +T ++
Sbjct: 178 ETAHSGMVIRGIKPDVSTFNILIKALCRAHQIRPAILMMEEMSSYGLTPDETTFTTLMQG 237
Query: 1017 LCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKD 1196
++G+ A I + M GC T N +I G E R + AL +LQ M D D
Sbjct: 238 YIEEGDTTGALRINDQMVQYGCPCTNITVNVLINGFCKEGRIEEALSFLQGMANDGFLPD 297
Query: 1197 SFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYLREKNDYEAMKLYD 1373
FTY+ L++GLC++G + A E+ G L T N ++ G + EA+++ +
Sbjct: 298 QFTYNTLVNGLCRAGHVKHALEIMDVILQRGFDLDIFTYNSLISGLCKLGEVEEAVEILE 357
Query: 1374 KMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVG 1553
+M C P+ TY +I + N+V EA + + G D + +GLC G
Sbjct: 358 QMVSRDCPPNTVTYNTLISTLCKDNQVTEATELARVLTSKGILPDVCTFNSLIQGLCMTG 417
Query: 1554 RHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIY 1733
++ ++ ++ KG D Y + I+++ + G + DA+ L +M +++G NV +Y
Sbjct: 418 NYKFALELFEEMKHKGCQPDEFTYNMLIDSYCSRGRLKDALNLLKEM-ESSGCARNVVVY 476
Query: 1734 DALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQ 1913
+ L+ GLCK KR++EA + + M I TYN LI ++++A QL D +
Sbjct: 477 NTLIDGLCKSKRIEEAEQIFDQMELQGISRNSVTYNTLIDGLCQNRRVEEASQLMDQMIM 536
Query: 1914 RGIRP 1928
G++P
Sbjct: 537 EGLKP 541
Score = 181 bits (460), Expect = 3e-44
Identities = 116/457 (25%), Positives = 220/457 (48%), Gaps = 4/457 (0%)
Frame = +3
Query: 564 PETYSAIFTILVRAKMFDEARAMMEEMES---IKGFEIPKSVFNVMVKGYGYEGMISMAL 734
P+T+ F L+ + ++E S I+G + S FN+++K I A+
Sbjct: 156 PDTH--FFNFLLNVLVDGNKLKLVETAHSGMVIRGIKPDVSTFNILIKALCRAHQIRPAI 213
Query: 735 EMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCM 914
M ++M + G P F +M+G ++ D ++ QM + G T + LI
Sbjct: 214 LMMEEMSSYGLTPDETTFTTLMQGYIEEGDTTGALRINDQMVQYGCPCTNITVNVLINGF 273
Query: 915 CSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNG 1094
C M N G PD + Y +++ LC+ G++ A EI++++ G + +
Sbjct: 274 CKEGRIEEALSFLQGMANDGFLPDQFTYNTLVNGLCRAGHVKHALEIMDVILQRGFDLDI 333
Query: 1095 FTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLE 1274
FTYN++I GL + A+E L++M + P ++ TY+ LI LCK + +A E+
Sbjct: 334 FTYNSLISGLCKLGEVEEAVEILEQMVSRDCPPNTVTYNTLISTLCKDNQVTEATELARV 393
Query: 1275 ASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNE 1451
+++G L V T N +++G N A++L+++M+ GC PD +TY ++I +
Sbjct: 394 LTSKGILPDVCTFNSLIQGLCMTGNYKFALELFEEMKHKGCQPDEFTYNMLIDSYCSRGR 453
Query: 1452 VLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYL 1631
+ +AL++ EM +G + + + GLC+ R EE + + +G+S ++ Y
Sbjct: 454 LKDALNLLKEMESSGCARNVVVYNTLIDGLCKSKRIEEAEQIFDQMELQGISRNSVTYNT 513
Query: 1632 AINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEH 1811
I+ +++A ++ MI G +P+ Y++LL C+ +K+ D++ +M +
Sbjct: 514 LIDGLCQNRRVEEASQLMDQMI-MEGLKPDKFTYNSLLTYFCRTGDIKKVADIVQTMTSN 572
Query: 1812 EIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
EP TY +I G+++ A +L +G+
Sbjct: 573 GCEPDIVTYGTIIGGLCKAGRVEAASRLLRTVQMKGM 609
Score = 168 bits (426), Expect = 6e-40
Identities = 115/436 (26%), Positives = 201/436 (46%), Gaps = 2/436 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
+EA + ++ M + GF + +N +V G G + ALE+ + G + +N+
Sbjct: 280 EEALSFLQGMAN-DGFLPDQFTYNTLVNGLCRAGHVKHALEIMDVILQRGFDLDIFTYNS 338
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
++ GL + ++E + +QM N TY+ LI +C + + G
Sbjct: 339 LISGLCKLGEVEEAVEILEQMVSRDCPPNTVTYNTLISTLCKDNQVTEATELARVLTSKG 398
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC GN A E+ E M++ GC P+ FTYN +I + R AL
Sbjct: 399 ILPDVCTFNSLIQGLCMTGNYKFALELFEEMKHKGCQPDEFTYNMLIDSYCSRGRLKDAL 458
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
L++ME ++ Y+ LIDGLCKS + +A+++F + +G +SVT N ++ G
Sbjct: 459 NLLKEMESSGCARNVVVYNTLIDGLCKSKRIEEAEQIFDQMELQGISRNSVTYNTLIDGL 518
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ + EA +L D+M G PD +TY ++ R ++ + I M NG + D
Sbjct: 519 CQNRRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRTGDIKKVADIVQTMTSNGCEPDI 578
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR E + ++ KG+ Y I A +A+ +
Sbjct: 579 VTYGTIIGGLCKAGRVEAASRLLRTVQMKGMVLTPQAYNPVIQALFKRKRTKEAMRLFRE 638
Query: 1692 MIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
M++ P+ Y + +GLC + EA D + MIE P+ +++ +L + +L
Sbjct: 639 MVEKAD-PPDAISYKIVYRGLCNGGGPIGEAVDFMVEMIEKGFLPEFSSFVMLAEGLCAL 697
Query: 1869 GQLQDAEQLYDFAMQR 1916
+L D M++
Sbjct: 698 SMEDTLIKLVDIVMEK 713
Score = 124 bits (311), Expect = 1e-25
Identities = 95/385 (24%), Positives = 170/385 (44%), Gaps = 2/385 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T++++ L + A + EEM+ KG + + +N+++ Y G + AL + ++
Sbjct: 405 TFNSLIQGLCMTGNYKFALELFEEMKH-KGCQPDEFTYNMLIDSYCSRGRLKDALNLLKE 463
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M++ G ++ +N ++ GL +S +E + + QME GI N TY+ LI +C
Sbjct: 464 MESSGCARNVVVYNTLIDGLCKSKRIEEAEQIFDQMELQGISRNSVTYNTLIDGLCQNRR 523
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
MI G+KPD + Y +++ C+ G+I K +IV+ M +NGC P+ TY
Sbjct: 524 VEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRTGDIKKVADIVQTMTSNGCEPDIVTYGT 583
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
I I GLCK+G + A + +G
Sbjct: 584 I-----------------------------------IGGLCKAGRVEAASRLLRTVQMKG 608
Query: 1290 Q-LSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIII-GLHLRHNEVLEA 1463
L+ N +++ + K EAM+L+ +M E PD +Y+I+ GL + EA
Sbjct: 609 MVLTPQAYNPVIQALFKRKRTKEAMRLFREMVEKADPPDAISYKIVYRGLCNGGGPIGEA 668
Query: 1464 LSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINA 1643
+ EM + G + +A+GLC + + ++ EK D D ++
Sbjct: 669 VDFMVEMIEKGFLPEFSSFVMLAEGLCALSMEDTLIKLVDIVMEKAKLSD--DEVSMVSG 726
Query: 1644 FATLGEMDDAIVFLNDMIDTTGRRP 1718
F + + DA+ L ++D+ R+P
Sbjct: 727 FLKINKFRDALATLGGILDS--RKP 749
Score = 100 bits (249), Expect = 4e-18
Identities = 74/320 (23%), Positives = 136/320 (42%), Gaps = 2/320 (0%)
Frame = +3
Query: 981 PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEW 1160
P+ Y Y ++ L K G+ + ++E M+ GC +G T+ + D L
Sbjct: 85 PNSYVYEELLRKLAKVGSFESMRGVLEEMKLAGCKISGGTFLIFVESYSKFDLHDEILGI 144
Query: 1161 LQKMEQD-NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYL 1334
L+ ME + + D+ ++ L++ L + + G V T N +++
Sbjct: 145 LEVMENEFGVKPDTHFFNFLLNVLVDGNKLKLVETAHSGMVIRGIKPDVSTFNILIKALC 204
Query: 1335 REKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTP 1514
R A+ + ++M G PD T+ ++ ++ + AL I +M + G
Sbjct: 205 RAHQIRPAILMMEEMSSYGLTPDETTFTTLMQGYIEEGDTTGALRINDQMVQYGCPCTNI 264
Query: 1515 LLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDM 1694
+ + G C+ GR EE F + + G D Y +N G + A+ + D+
Sbjct: 265 TVNVLINGFCKEGRIEEALSFLQGMANDGFLPDQFTYNTLVNGLCRAGHVKHALEIM-DV 323
Query: 1695 IDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQ 1874
I G ++ Y++L+ GLCK ++EA ++L M+ + P TYN LI Q
Sbjct: 324 ILQRGFDLDIFTYNSLISGLCKLGEVEEAVEILEQMVSRDCPPNTVTYNTLISTLCKDNQ 383
Query: 1875 LQDAEQLYDFAMQRGIRPSI 1934
+ +A +L +GI P +
Sbjct: 384 VTEATELARVLTSKGILPDV 403
>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
Length = 460
Score = 215 bits (548), Expect = 2e-58
Identities = 124/421 (29%), Positives = 216/421 (51%), Gaps = 1/421 (0%)
Frame = +3
Query: 627 AMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAVMKG 806
A+++E G + + ++ G ALE+F +++ G P++ +N ++ G
Sbjct: 1 ALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDG 60
Query: 807 LVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPD 986
L ++ L+ L ++M E GI + TY+ LI +C +M+ GIKPD
Sbjct: 61 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 120
Query: 987 IYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQ 1166
+ Y +I LCK G +D+A ++ E M G P+ TYN +I GL + D AL+ +
Sbjct: 121 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 180
Query: 1167 KMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYLREK 1343
+M + I D TY+ LIDGLCK+G + +A ++F E +G + VT ++ G +
Sbjct: 181 EMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAG 240
Query: 1344 NDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLK 1523
EA+KL+++M E G PD TY +I + ++ EAL ++ EM + G D
Sbjct: 241 KLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYN 300
Query: 1524 KMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDT 1703
+ GLC+ G+ +E ++ + EKG+ D Y I+ G++D+A+ +M++
Sbjct: 301 TLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE- 359
Query: 1704 TGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQD 1883
G +P+V Y+ L+ GLCK +L EA + M+E I+P TY ++++ + ++
Sbjct: 360 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEE 419
Query: 1884 A 1886
A
Sbjct: 420 A 420
Score = 199 bits (507), Expect = 1e-52
Identities = 120/388 (30%), Positives = 200/388 (51%), Gaps = 1/388 (0%)
Frame = +3
Query: 543 REGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMI 722
R+G A TY+ + L +A DEA + EEM KG + +N ++ G G +
Sbjct: 44 RQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKL 102
Query: 723 SMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHL 902
AL++F++M G KP + +N ++ GL ++ L+ L ++M E GI + TY+ L
Sbjct: 103 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 162
Query: 903 IRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGC 1082
I +C +M+ GIKPD+ YT +I LCK G +D+A ++ E M G
Sbjct: 163 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGI 222
Query: 1083 NPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKE 1262
P+ TY +I GL + D AL+ ++M + I D TY+ LIDGLCK+G + +A +
Sbjct: 223 KPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALK 282
Query: 1263 VFLEASAEG-QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHL 1439
+F E +G + VT N ++ G + EA+KL+++M E G PD TY +I
Sbjct: 283 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 342
Query: 1440 RHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDAS 1619
+ ++ EAL ++ EM + G D + GLC+ G+ +E ++ + EKG+ D
Sbjct: 343 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDEL 402
Query: 1620 DYYLAINAFATLGEMDDAIVFLNDMIDT 1703
Y + ++ ++A FL+++ +T
Sbjct: 403 TYRRVVESYCRAKRFEEARGFLSEVSET 430
Score = 193 bits (490), Expect = 3e-50
Identities = 114/353 (32%), Positives = 187/353 (52%), Gaps = 6/353 (1%)
Frame = +3
Query: 972 GIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLA 1151
G+ P + Y +I LCK G +D+A ++ E M G P+ TYN +I GL + D A
Sbjct: 46 GVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 105
Query: 1152 LEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRG 1328
L+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G + VT N ++ G
Sbjct: 106 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 165
Query: 1329 YLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLD 1508
+ EA+KL+++M E G PD TY +I + ++ EAL ++ EM + G D
Sbjct: 166 LCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 225
Query: 1509 TPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLN 1688
+ GLC+ G+ +E ++ + EKG+ D Y I+ G++D+A+
Sbjct: 226 VVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 285
Query: 1689 DMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
+M++ G +P+V Y+ L+ GLCK +L EA + M+E I+P TYN LI
Sbjct: 286 EMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 344
Query: 1869 GQLQDAEQLYDFAMQRGIRPSIKPVAEEPEYLLK-----EYVKSQEEMVAMSV 2012
G+L +A +L++ +++GI+P + + L K E +K EEMV +
Sbjct: 345 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 397
Score = 187 bits (476), Expect = 2e-48
Identities = 113/349 (32%), Positives = 182/349 (52%), Gaps = 1/349 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
TY+ + L +A DEA + EEM KG + +N ++ G G + AL++F++
Sbjct: 88 TYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 146
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M G KP + +N ++ GL ++ L+ L ++M E GI + TY+ LI +C
Sbjct: 147 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGK 206
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+M+ GIKPD+ YT +I LCK G +D+A ++ E M G P+ TYN
Sbjct: 207 LDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNT 266
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL + D AL+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G
Sbjct: 267 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 326
Query: 1290 -QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
+ VT N ++ G + EA+KL+++M E G PD TY +I + ++ EAL
Sbjct: 327 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL 386
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYD 1613
++ EM + G D +++ + CR R EE GF + E + +D
Sbjct: 387 KLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Score = 186 bits (473), Expect = 5e-48
Identities = 113/353 (32%), Positives = 186/353 (52%), Gaps = 6/353 (1%)
Frame = +3
Query: 972 GIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLA 1151
G + D+ YT V+ AL + G ++A E+ +R G P TYN +I GL + D A
Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70
Query: 1152 LEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRG 1328
L+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G + VT N ++ G
Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Query: 1329 YLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLD 1508
+ EA+KL+++M E G PD TY +I + ++ EAL ++ EM + G D
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 1509 TPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLN 1688
+ GLC+ G+ +E ++ + EKG+ D Y I+ G++D+A+
Sbjct: 191 VVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFE 250
Query: 1689 DMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
+M++ G +P+V Y+ L+ GLCK +L EA + M+E I+P TYN LI
Sbjct: 251 EMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 309
Query: 1869 GQLQDAEQLYDFAMQRGIRPSIKPVAEEPEYLLK-----EYVKSQEEMVAMSV 2012
G+L +A +L++ +++GI+P + + L K E +K EEMV +
Sbjct: 310 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 362
Score = 167 bits (422), Expect = 5e-41
Identities = 102/319 (31%), Positives = 163/319 (51%), Gaps = 1/319 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
TY+ + L +A DEA + EEM KG + +N ++ G G + AL++F++
Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 181
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M G KP + + ++ GL ++ L+ L ++M E GI + TY+ LI +C
Sbjct: 182 MVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGK 241
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+M+ GIKPD+ Y +I LCK G +D+A ++ E M G P+ TYN
Sbjct: 242 LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNT 301
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL + D AL+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G
Sbjct: 302 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 361
Query: 1290 -QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
+ VT N ++ G + EA+KL+++M E G PD TYR ++ + R EA
Sbjct: 362 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEAR 421
Query: 1467 SIYHEMRKNGSDLDTPLLK 1523
E+ + D D L+
Sbjct: 422 GFLSEVSETDLDFDKKALE 440
>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
Length = 460
Score = 215 bits (548), Expect = 2e-58
Identities = 124/421 (29%), Positives = 218/421 (51%), Gaps = 1/421 (0%)
Frame = +3
Query: 627 AMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAVMKG 806
A+++E G + + ++ G ALE+F +++ G P++ +N ++ G
Sbjct: 1 ALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDG 60
Query: 807 LVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPD 986
L ++ L+ L ++M E GI + TY+ LI +C +M+ GIKPD
Sbjct: 61 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 120
Query: 987 IYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQ 1166
+ Y +I LCK G +D+A ++ E M G P+ TYN +I GL + D AL+ +
Sbjct: 121 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 180
Query: 1167 KMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYLREK 1343
+M + I D TYS LIDGLCK+G + +A ++F E +G + + VT + ++ G +
Sbjct: 181 EMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAG 240
Query: 1344 NDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLK 1523
EA+KL+++M E G P+ TY +I + ++ EAL ++ EM + G D
Sbjct: 241 KLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYN 300
Query: 1524 KMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDT 1703
+ GLC+ G+ +E ++ + EKG+ D Y I+ G++D+A+ +M++
Sbjct: 301 TLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE- 359
Query: 1704 TGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQD 1883
G +P+V Y+ L+ GLCK +L EA + M+E I+P TY ++++ + ++
Sbjct: 360 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEE 419
Query: 1884 A 1886
A
Sbjct: 420 A 420
Score = 198 bits (504), Expect = 3e-52
Identities = 119/388 (30%), Positives = 201/388 (51%), Gaps = 1/388 (0%)
Frame = +3
Query: 543 REGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMI 722
R+G A TY+ + L +A DEA + EEM KG + +N ++ G G +
Sbjct: 44 RQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKL 102
Query: 723 SMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHL 902
AL++F++M G KP + +N ++ GL ++ L+ L ++M E GI + TY+ L
Sbjct: 103 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 162
Query: 903 IRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGC 1082
I +C +M+ GIKPD+ Y+ +I LCK G +D+A ++ E M G
Sbjct: 163 IDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGI 222
Query: 1083 NPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKE 1262
PN TY+ +I GL + D AL+ ++M + I + TY+ LIDGLCK+G + +A +
Sbjct: 223 KPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALK 282
Query: 1263 VFLEASAEG-QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHL 1439
+F E +G + VT N ++ G + EA+KL+++M E G PD TY +I
Sbjct: 283 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 342
Query: 1440 RHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDAS 1619
+ ++ EAL ++ EM + G D + GLC+ G+ +E ++ + EKG+ D
Sbjct: 343 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDEL 402
Query: 1620 DYYLAINAFATLGEMDDAIVFLNDMIDT 1703
Y + ++ ++A FL+++ +T
Sbjct: 403 TYRRVVESYCRAKRFEEARGFLSEVSET 430
Score = 189 bits (481), Expect = 4e-49
Identities = 112/353 (31%), Positives = 187/353 (52%), Gaps = 6/353 (1%)
Frame = +3
Query: 972 GIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLA 1151
G+ P + Y +I LCK G +D+A ++ E M G P+ TYN +I GL + D A
Sbjct: 46 GVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEA 105
Query: 1152 LEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRG 1328
L+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G + VT N ++ G
Sbjct: 106 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 165
Query: 1329 YLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLD 1508
+ EA+KL+++M E G PD TY +I + ++ EAL ++ EM + G +
Sbjct: 166 LCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPN 225
Query: 1509 TPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLN 1688
+ GLC+ G+ +E ++ + EKG+ + Y I+ G++D+A+
Sbjct: 226 VVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFE 285
Query: 1689 DMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
+M++ G +P+V Y+ L+ GLCK +L EA + M+E I+P TYN LI
Sbjct: 286 EMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 344
Query: 1869 GQLQDAEQLYDFAMQRGIRPSIKPVAEEPEYLLK-----EYVKSQEEMVAMSV 2012
G+L +A +L++ +++GI+P + + L K E +K EEMV +
Sbjct: 345 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 397
Score = 187 bits (475), Expect = 3e-48
Identities = 113/349 (32%), Positives = 182/349 (52%), Gaps = 1/349 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
TY+ + L +A DEA + EEM KG + +N ++ G G + AL++F++
Sbjct: 88 TYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 146
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M G KP + +N ++ GL ++ L+ L ++M E GI + TYS LI +C
Sbjct: 147 MVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGK 206
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+M+ GIKP++ Y+ +I LCK G +D+A ++ E M G PN TYN
Sbjct: 207 LDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNT 266
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL + D AL+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G
Sbjct: 267 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 326
Query: 1290 -QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
+ VT N ++ G + EA+KL+++M E G PD TY +I + ++ EAL
Sbjct: 327 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL 386
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYD 1613
++ EM + G D +++ + CR R EE GF + E + +D
Sbjct: 387 KLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
Score = 187 bits (474), Expect = 4e-48
Identities = 113/353 (32%), Positives = 186/353 (52%), Gaps = 6/353 (1%)
Frame = +3
Query: 972 GIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLA 1151
G + D+ YT V+ AL + G ++A E+ +R G P TYN +I GL + D A
Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70
Query: 1152 LEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRG 1328
L+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G + VT N ++ G
Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130
Query: 1329 YLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLD 1508
+ EA+KL+++M E G PD TY +I + ++ EAL ++ EM + G D
Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 190
Query: 1509 TPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLN 1688
+ GLC+ G+ +E ++ + EKG+ + Y I+ G++D+A+
Sbjct: 191 VVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFE 250
Query: 1689 DMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
+M++ G +PNV Y+ L+ GLCK +L EA + M+E I+P TYN LI
Sbjct: 251 EMVEK-GIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 309
Query: 1869 GQLQDAEQLYDFAMQRGIRPSIKPVAEEPEYLLK-----EYVKSQEEMVAMSV 2012
G+L +A +L++ +++GI+P + + L K E +K EEMV +
Sbjct: 310 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 362
Score = 168 bits (426), Expect = 1e-41
Identities = 103/319 (32%), Positives = 164/319 (51%), Gaps = 1/319 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
TY+ + L +A DEA + EEM KG + +N ++ G G + AL++F++
Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 181
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M G KP + ++ ++ GL ++ L+ L ++M E GI N TYS LI +C
Sbjct: 182 MVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGK 241
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
+M+ GIKP++ Y +I LCK G +D+A ++ E M G P+ TYN
Sbjct: 242 LDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNT 301
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL + D AL+ ++M + I D TY+ LIDGLCK+G + +A ++F E +G
Sbjct: 302 LIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 361
Query: 1290 -QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEAL 1466
+ VT N ++ G + EA+KL+++M E G PD TYR ++ + R EA
Sbjct: 362 IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEAR 421
Query: 1467 SIYHEMRKNGSDLDTPLLK 1523
E+ + D D L+
Sbjct: 422 GFLSEVSETDLDFDKKALE 440
>XP_008447642.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Cucumis melo]
Length = 766
Score = 221 bits (564), Expect = 4e-58
Identities = 139/491 (28%), Positives = 235/491 (47%), Gaps = 3/491 (0%)
Frame = +3
Query: 465 PLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEM 644
P + LR Q D LR F WA + + + Y I L +A F+ R ++EEM
Sbjct: 64 PKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEM 123
Query: 645 ESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGH-KPSLGAFNAVMKGLVQSD 821
+ + G E + +F + V+ YG + + + + M++ KP +N ++ LV ++
Sbjct: 124 K-LSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVDAN 182
Query: 822 DLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYT 1001
L++++ H M I + +T++ LI+ +C +M ++G+ PD +T
Sbjct: 183 KLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFT 242
Query: 1002 IVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQD 1181
++ + GN+D A I E M GC T N +I G + R D AL ++Q+ +
Sbjct: 243 TIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVNE 302
Query: 1182 NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSS--VTCNCMLRGYLREKNDYE 1355
D FTY+ L++GLCK G A EV ++A G L T N ++ G+ + E
Sbjct: 303 GFRPDQFTYNTLVNGLCKVGHAKHAMEV-VDAMLLGGLDPDIYTYNSLISGFCKLGEIEE 361
Query: 1356 AMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAK 1535
A+K+ D+M C P+ TY II + N V EA I + G D + +
Sbjct: 362 AVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLIQ 421
Query: 1536 GLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRR 1715
GLC H+ ++ ++ KG D Y + I + + ++++A+ L +M + +G
Sbjct: 422 GLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEM-ELSGCA 480
Query: 1716 PNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQL 1895
NV IY+ L+ G CK KR++EA ++ + M + TYNILI +++DA QL
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 1896 YDFAMQRGIRP 1928
D + G+RP
Sbjct: 541 MDQMIMEGLRP 551
Score = 190 bits (482), Expect = 4e-47
Identities = 123/463 (26%), Positives = 221/463 (47%), Gaps = 6/463 (1%)
Frame = +3
Query: 552 YAHNPET--YSAIFTILVRA---KMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEG 716
Y P+T Y+ + +LV A K+ + A + M + S FN+++K
Sbjct: 162 YRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVR----RRIRHDVSTFNILIKALCKAH 217
Query: 717 MISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYS 896
+ A+ M ++M + G P F +M+G ++ +L+ + +QM E G T +
Sbjct: 218 QVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVN 277
Query: 897 HLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNN 1076
LI C + +N G +PD + Y +++ LCK G+ A E+V+ M
Sbjct: 278 VLINGFCKQGRIDQALSFIQEAVNEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLG 337
Query: 1077 GCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKA 1256
G +P+ +TYN++I G + A++ L +M + ++ TY+ +I LCK + +A
Sbjct: 338 GLDPDIYTYNSLISGFCKLGEIEEAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEA 397
Query: 1257 KEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGL 1433
E+ +++G L V T N +++G N AM+L+++M+ GC PD +TY ++I
Sbjct: 398 TEIARLLTSKGVLPDVCTFNSLIQGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIES 457
Query: 1434 HLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYD 1613
++ EAL++ EM +G + + + G C+ R EE + + +GVS D
Sbjct: 458 LCSSRKLEEALNLLKEMELSGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD 517
Query: 1614 ASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDML 1793
+ Y + I+ ++DA ++ MI G RP+ Y++LL CK +K+A D++
Sbjct: 518 SVTYNILIDGLCKSKRVEDAAQLMDQMI-MEGLRPDKFTYNSLLTHFCKTGDIKKAADIV 576
Query: 1794 NSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
+M P TY LI G++Q A +L +G+
Sbjct: 577 QTMTSSGCNPDIVTYGTLISGLCKAGRVQVASRLLRSIQMKGM 619
Score = 164 bits (416), Expect = 1e-38
Identities = 110/436 (25%), Positives = 200/436 (45%), Gaps = 2/436 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
D+A + ++E + +GF + +N +V G G A+E+ M G P + +N+
Sbjct: 290 DQALSFIQEAVN-EGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNS 348
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
++ G + ++E + QM N TY+ +I +C + + G
Sbjct: 349 LISGFCKLGEIEEAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKG 408
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
+ PD+ + +I LC N A E+ E M+ GC P+ FTYN +I L + ++ + AL
Sbjct: 409 VLPDVCTFNSLIQGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEAL 468
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
L++ME ++ Y+ LIDG CK+ + +A+E+F E +G SVT N ++ G
Sbjct: 469 NLLKEMELSGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGL 528
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ K +A +L D+M G PD +TY ++ + ++ +A I M +G + D
Sbjct: 529 CKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDI 588
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR + + ++ KG+ Y I A +A+ +
Sbjct: 589 VTYGTLISGLCKAGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFRE 648
Query: 1692 MIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
M++ + P+ Y + +GLC + EA D MIE P+ +++ +L + +L
Sbjct: 649 MLEKS-EPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTL 707
Query: 1869 GQLQDAEQLYDFAMQR 1916
+L D M++
Sbjct: 708 SMDDTLLKLVDMIMEK 723
Score = 107 bits (266), Expect = 4e-20
Identities = 85/379 (22%), Positives = 162/379 (42%), Gaps = 2/379 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T++++ L + A + EEM+ KG + +N++++ + AL + ++
Sbjct: 415 TFNSLIQGLCLSSNHKNAMELFEEMKG-KGCRPDEFTYNMLIESLCSSRKLEEALNLLKE 473
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M+ G ++ +N ++ G ++ +E + + +ME G+ + TY+ LI +C
Sbjct: 474 MELSGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKR 533
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
MI G++PD + Y +++ CK G+I KA +IV+ M ++GCNP+ TY
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGT 593
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GLCK+G + A + +G
Sbjct: 594 LI-----------------------------------SGLCKAGRVQVASRLLRSIQMKG 618
Query: 1290 Q-LSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIII-GLHLRHNEVLEA 1463
L+ N +++ + +EAM+L+ +M E PD TY+I+ GL + EA
Sbjct: 619 MVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAITYKIVYRGLCNGGGPIGEA 678
Query: 1464 LSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINA 1643
+ EM + G+ + +A+GL + + M+ EK + I
Sbjct: 679 VDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMIMEKAKFKERE--ISTIRG 736
Query: 1644 FATLGEMDDAIVFLNDMID 1700
F + + DA+ L ++D
Sbjct: 737 FLKIRKFQDALSTLGGILD 755
Score = 88.2 bits (217), Expect = 3e-14
Identities = 68/334 (20%), Positives = 143/334 (42%), Gaps = 9/334 (2%)
Frame = +3
Query: 960 MINWGIK-----PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGL 1124
+ NW K P Y ++ L K G+ + ++E M+ +GC + + +
Sbjct: 83 VFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESY 142
Query: 1125 YNEKRPDLALEWLQKMEQD-NIPKDSFTYSILIDGLC---KSGFMHKAKEVFLEASAEGQ 1292
+ D + ++ ME + I D+ Y++L++ L K + A +
Sbjct: 143 GKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHD 202
Query: 1293 LSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSI 1472
+S T N +++ + A+ + ++M G PD T+ I+ ++ + AL I
Sbjct: 203 VS--TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRI 260
Query: 1473 YHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFAT 1652
+M + G + + G C+ GR ++ F + +G D Y +N
Sbjct: 261 KEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVNEGFRPDQFTYNTLVNGLCK 320
Query: 1653 LGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPA 1832
+G A+ ++ M+ G P++ Y++L+ G CK ++EA +L+ M+ + P
Sbjct: 321 VGHAKHAMEVVDAML-LGGLDPDIYTYNSLISGFCKLGEIEEAVKILDQMVSRDCSPNAV 379
Query: 1833 TYNILIKANISLGQLQDAEQLYDFAMQRGIRPSI 1934
TYN +I + ++++A ++ +G+ P +
Sbjct: 380 TYNTIISSLCKENRVEEATEIARLLTSKGVLPDV 413
>XP_010529844.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Tarenaya hassleriana]
Length = 748
Score = 221 bits (562), Expect = 6e-58
Identities = 133/490 (27%), Positives = 242/490 (49%), Gaps = 2/490 (0%)
Frame = +3
Query: 465 PLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEM 644
PL + LR Q D + LR F WA + +A + Y I L R+ FD + ++E+M
Sbjct: 46 PLQLLDSLRRQPDESAALRLFDWASKQPNFAPDTSVYEEILLQLGRSGSFDSMKKILEDM 105
Query: 645 ESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKN-LGHKPSLGAFNAVMKGLVQSD 821
G E+ S F ++++ + + L + MK+ G KP +N ++ LV ++
Sbjct: 106 RD-SGCEMSNSSFLILIESFARFDLHDEILGVVDWMKHGFGLKPDTHFYNRLLNLLVDAN 164
Query: 822 DLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYT 1001
L++++I H+QM GI + +T++ LI+ +CS +M ++G+KPD +T
Sbjct: 165 KLKLVEIAHEQMGLWGIKPDVSTFNVLIKALCSAHQLRPAILMAEEMPSYGLKPDEKTFT 224
Query: 1002 IVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQD 1181
++ ++G+++ A I E M GC+ + + N ++ G E R + AL ++++M +
Sbjct: 225 TIMQGYIEEGDLNGAMRIREQMVEFGCSWSNVSVNVLVHGFCKEGRVEEALNFIEEMANE 284
Query: 1182 NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEA 1358
D +T++ L++GLCK+G + A E+ EG V T N ++ G + EA
Sbjct: 285 GFFPDQYTFNTLVNGLCKAGHVKHAMEIMDVMLQEGFDPDVFTYNSVISGLCKTGEAKEA 344
Query: 1359 MKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKG 1538
+++ D+M C P+ TY +I + N++ EA + + G D + +G
Sbjct: 345 VEILDQMITRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKGILPDVCTFNSLIQG 404
Query: 1539 LCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRP 1718
LC H + ++ G D Y + I++ T G++D A+ L M ++TG
Sbjct: 405 LCLTRNHSLAMELFDEMKNNGCEPDEFTYNMLIDSLCTKGKLDKALDMLKQM-ESTGCSR 463
Query: 1719 NVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQLY 1898
+V Y+ L+ G CK K+++EA ++ + M + TYN LI +++DA QL
Sbjct: 464 SVITYNTLIDGFCKAKKVREAEEIFDEMELQGVSRNSVTYNTLIDGLCKNRRVEDAAQLM 523
Query: 1899 DFAMQRGIRP 1928
D + G++P
Sbjct: 524 DQMIMEGLKP 533
Score = 192 bits (487), Expect = 7e-48
Identities = 123/463 (26%), Positives = 219/463 (47%), Gaps = 3/463 (0%)
Frame = +3
Query: 543 REGYAHNPET--YSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEG 716
+ G+ P+T Y+ + +LV A E+M + G + S FNV++K
Sbjct: 141 KHGFGLKPDTHFYNRLLNLLVDANKLKLVEIAHEQM-GLWGIKPDVSTFNVLIKALCSAH 199
Query: 717 MISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYS 896
+ A+ M ++M + G KP F +M+G ++ DL + +QM E G + + +
Sbjct: 200 QLRPAILMAEEMPSYGLKPDEKTFTTIMQGYIEEGDLNGAMRIREQMVEFGCSWSNVSVN 259
Query: 897 HLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNN 1076
L+ C +M N G PD Y + +++ LCK G++ A EI+++M
Sbjct: 260 VLVHGFCKEGRVEEALNFIEEMANEGFFPDQYTFNTLVNGLCKAGHVKHAMEIMDVMLQE 319
Query: 1077 GCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKA 1256
G +P+ FTYN++I GL A+E L +M + ++ TY+ LI LCK + +A
Sbjct: 320 GFDPDVFTYNSVISGLCKTGEAKEAVEILDQMITRDCSPNTVTYNTLISTLCKENQIEEA 379
Query: 1257 KEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGL 1433
E+ +++G L V T N +++G +N AM+L+D+M+ GC PD +TY ++I
Sbjct: 380 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHSLAMELFDEMKNNGCEPDEFTYNMLIDS 439
Query: 1434 HLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYD 1613
++ +AL + +M G + G C+ + E + + +GVS +
Sbjct: 440 LCTKGKLDKALDMLKQMESTGCSRSVITYNTLIDGFCKAKKVREAEEIFDEMELQGVSRN 499
Query: 1614 ASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDML 1793
+ Y I+ ++DA ++ MI G +P+ Y++LL C+ +K+A D++
Sbjct: 500 SVTYNTLIDGLCKNRRVEDAAQLMDQMI-MEGLKPDKFTYNSLLTHFCRVGDIKKAADIV 558
Query: 1794 NSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
+M EP TY LI G++ A +L +G+
Sbjct: 559 QTMTSDGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSIQMKGM 601
Score = 182 bits (461), Expect = 2e-44
Identities = 120/436 (27%), Positives = 206/436 (47%), Gaps = 2/436 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
+EA +EEM + +GF + FN +V G G + A+E+ M G P + +N+
Sbjct: 272 EEALNFIEEMAN-EGFFPDQYTFNTLVNGLCKAGHVKHAMEIMDVMLQEGFDPDVFTYNS 330
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
V+ GL ++ + + + QM N TY+ LI +C + + G
Sbjct: 331 VISGLCKTGEAKEAVEILDQMITRDCSPNTVTYNTLISTLCKENQIEEATELARVLTSKG 390
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC N A E+ + M+NNGC P+ FTYN +I L + + D AL
Sbjct: 391 ILPDVCTFNSLIQGLCLTRNHSLAMELFDEMKNNGCEPDEFTYNMLIDSLCTKGKLDKAL 450
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
+ L++ME + TY+ LIDG CK+ + +A+E+F E +G +SVT N ++ G
Sbjct: 451 DMLKQMESTGCSRSVITYNTLIDGFCKAKKVREAEEIFDEMELQGVSRNSVTYNTLIDGL 510
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ + +A +L D+M G PD +TY ++ R ++ +A I M +G + D
Sbjct: 511 CKNRRVEDAAQLMDQMIMEGLKPDKFTYNSLLTHFCRVGDIKKAADIVQTMTSDGCEPDI 570
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR + + ++ KG+ Y I D+A+ +
Sbjct: 571 VTYGTLIGGLCKAGRVDVASKLLRSIQMKGMILTPHAYNPVIQGLFRKRRTDEAMNLFRE 630
Query: 1692 MIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
M++ G P+ Y + +GLC + EA D L ++E P+ ++ +L + +SL
Sbjct: 631 MVE-NGGNPDAVSYRIVFRGLCNGGGPIGEAVDFLVELMEKGFVPEFSSMYMLSEGLLSL 689
Query: 1869 GQLQDAEQLYDFAMQR 1916
+L + MQ+
Sbjct: 690 SMEDKLVKLLNMVMQK 705
Score = 115 bits (288), Expect = 7e-23
Identities = 88/387 (22%), Positives = 174/387 (44%), Gaps = 1/387 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T++++ L + A + +EM++ G E + +N+++ +G + AL+M ++
Sbjct: 397 TFNSLIQGLCLTRNHSLAMELFDEMKN-NGCEPDEFTYNMLIDSLCTKGKLDKALDMLKQ 455
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M++ G S+ +N ++ G ++ + + + +ME G+ N TY+ LI +C
Sbjct: 456 MESTGCSRSVITYNTLIDGFCKAKKVREAEEIFDEMELQGVSRNSVTYNTLIDGLCKNRR 515
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
MI G+KPD + Y +++ C+ G+I KA +IV+ M ++GC P+ TY
Sbjct: 516 VEDAAQLMDQMIMEGLKPDKFTYNSLLTHFCRVGDIKKAADIVQTMTSDGCEPDIVTYGT 575
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL R D+A + L+ ++ + Y+ +I GL
Sbjct: 576 LIGGLCKAGRVDVASKLLRSIQMKGMILTPHAYNPVIQGL-------------------- 615
Query: 1290 QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIII-GLHLRHNEVLEAL 1466
R++ EAM L+ +M E G PD +YRI+ GL + EA+
Sbjct: 616 --------------FRKRRTDEAMNLFREMVENGGNPDAVSYRIVFRGLCNGGGPIGEAV 661
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAF 1646
E+ + G + + +++GL + ++ M+ +K + ++ + +
Sbjct: 662 DFLVELMEKGFVPEFSSMYMLSEGLLSLSMEDKLVKLLNMVMQK-AKFSENEASM-VKGL 719
Query: 1647 ATLGEMDDAIVFLNDMIDTTGRRPNVT 1727
+ + DA+ L +++T RRP T
Sbjct: 720 LKIRKFQDALATLGGVLET--RRPERT 744
Score = 101 bits (251), Expect = 2e-18
Identities = 76/332 (22%), Positives = 145/332 (43%), Gaps = 7/332 (2%)
Frame = +3
Query: 960 MINWGIK-----PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGL 1124
+ +W K PD Y ++ L + G+ D +I+E MR++GC + ++ +I
Sbjct: 65 LFDWASKQPNFAPDTSVYEEILLQLGRSGSFDSMKKILEDMRDSGCEMSNSSFLILIESF 124
Query: 1125 YNEKRPDLALEWLQKMEQD-NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSS 1301
D L + M+ + D+ Y+ L++ L + + + + G
Sbjct: 125 ARFDLHDEILGVVDWMKHGFGLKPDTHFYNRLLNLLVDANKLKLVEIAHEQMGLWGIKPD 184
Query: 1302 V-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYH 1478
V T N +++ A+ + ++M G PD T+ I+ ++ ++ A+ I
Sbjct: 185 VSTFNVLIKALCSAHQLRPAILMAEEMPSYGLKPDEKTFTTIMQGYIEEGDLNGAMRIRE 244
Query: 1479 EMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLG 1658
+M + G + + G C+ GR EE F + + +G D + +N G
Sbjct: 245 QMVEFGCSWSNVSVNVLVHGFCKEGRVEEALNFIEEMANEGFFPDQYTFNTLVNGLCKAG 304
Query: 1659 EMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATY 1838
+ A+ ++ M+ G P+V Y++++ GLCK KEA ++L+ MI + P TY
Sbjct: 305 HVKHAMEIMDVMLQE-GFDPDVFTYNSVISGLCKTGEAKEAVEILDQMITRDCSPNTVTY 363
Query: 1839 NILIKANISLGQLQDAEQLYDFAMQRGIRPSI 1934
N LI Q+++A +L +GI P +
Sbjct: 364 NTLISTLCKENQIEEATELARVLTSKGILPDV 395
>XP_010427028.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic isoform X2 [Camelina sativa] XP_019084860.1
PREDICTED: pentatricopeptide repeat-containing protein
At3g53700, chloroplastic isoform X1 [Camelina sativa]
Length = 754
Score = 220 bits (561), Expect = 9e-58
Identities = 138/484 (28%), Positives = 239/484 (49%), Gaps = 3/484 (0%)
Frame = +3
Query: 486 LRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFE 665
LR Q D + LR F A + +A P Y I L R+ FD+ R ++E+M+S G E
Sbjct: 57 LRSQPDDSAALRLFNLASKQPDFAPEPALYEEILLRLGRSGSFDDMRKLLEDMKS-SGCE 115
Query: 666 IPKSVFNVMVKGYGYEGMISMALEMFQKM-KNLGHKPSLGAFNAVMKGLVQSDDLEVMQI 842
I S F V+++ Y + L + M + G KP +N ++ LV ++L+++++
Sbjct: 116 IGTSPFLVLIESYAQFDLYDEILGVVHWMIEGFGLKPDTHFYNRMLNLLVDGNNLKLVEV 175
Query: 843 LHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALC 1022
H +M GI + +T++ LI+ +C DM ++G+ PD +T ++
Sbjct: 176 AHTEMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYI 235
Query: 1023 KDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKM-EQDNIPKDS 1199
++G++D A I E M GC+ + + N I+ G E R + AL ++Q+M Q D
Sbjct: 236 EEGDLDGALRIREHMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQGGFFPDQ 295
Query: 1200 FTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDK 1376
+T++ L++GLCK+G + A E+ EG V T N ++ G + EA+++ D+
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 1377 MREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGR 1556
M C P+ TY +I + N+V EA + + G D + +GLC
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 1557 HEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYD 1736
H ++ +R KG D Y + I++ + G++D+A+ L M +++G +V Y+
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ESSGCARSVITYN 474
Query: 1737 ALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQR 1916
L+ G CK +++EA ++ N M H + TYN LI +++DA QL D +
Sbjct: 475 TLIDGFCKANKIREAEEIFNEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 1917 GIRP 1928
G +P
Sbjct: 535 GQKP 538
Score = 188 bits (477), Expect = 2e-46
Identities = 124/473 (26%), Positives = 222/473 (46%), Gaps = 2/473 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
++A ++EM + GF + FN +V G G + A+E+ M G+ P + +N+
Sbjct: 276 EDALNFIQEMSNQGGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
V+ GL + +++ + QM N TY+ LI +C + + G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC N A E+ E MR+ GC P+ FTYN +I L ++ + D AL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
L++ME + TY+ LIDG CK+ + +A+E+F E G +SVT N ++ G
Sbjct: 456 NMLKQMESSGCARSVITYNTLIDGFCKANKIREAEEIFNEMEVHGVSRNSVTYNTLIDGL 515
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ + +A +L D+M G PD +TY ++ R ++ +A I M NG + D
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR E + ++ KG++ Y I + +A+ +
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEALNLFRE 635
Query: 1692 MIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
M++ P+ Y + +GLC ++EA D L ++E P+ ++ +L + ++L
Sbjct: 636 MLEQNAAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695
Query: 1869 GQLQDAEQLYDFAMQRGIRPSIKPVAEEPEYLLKEYVKSQEEMVAMSVI*FVL 2027
+ +L + MQ+ +EE ++K +K ++ A++ + VL
Sbjct: 696 SMEETLVKLVNMVMQKA------RFSEEEVSMVKGLLKIRKYQDALATLGGVL 742
Score = 115 bits (287), Expect = 1e-22
Identities = 92/388 (23%), Positives = 170/388 (43%), Gaps = 2/388 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T++++ L + A + EEM S KG E + +N+++ +G + AL M ++
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M++ G S+ +N ++ G +++ + + + +ME G+ N TY+ LI +C
Sbjct: 461 MESSGCARSVITYNTLIDGFCKANKIREAEEIFNEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
MI G KPD + Y +++ C+ G+I KA +IV+ M +NGC P+ TY
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL R ++A + L+ ++ I Y+ +I GL
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGL-------------------- 620
Query: 1290 QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREV-GCMPDGYTYRIII-GLHLRHNEVLEA 1463
R++ EA+ L+ +M E PD +YRI+ GL + EA
Sbjct: 621 --------------FRKRKTTEALNLFREMLEQNAAAPDAVSYRIVFRGLCNGGGPIREA 666
Query: 1464 LSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINA 1643
+ E+ + G + L +A+GL + E M+ +K + + + +
Sbjct: 667 VDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQK--ARFSEEEVSMVKG 724
Query: 1644 FATLGEMDDAIVFLNDMIDTTGRRPNVT 1727
+ + DA+ L ++D+ R+P T
Sbjct: 725 LLKIRKYQDALATLGGVLDS--RQPRRT 750
Score = 73.6 bits (179), Expect = 1e-09
Identities = 66/323 (20%), Positives = 135/323 (41%), Gaps = 6/323 (1%)
Frame = +3
Query: 981 PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRG-----LYNEKRPD 1145
P+ Y ++ L + G+ D +++E M+++GC + +I LY+E
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMRKLLEDMKSSGCEIGTSPFLVLIESYAQFDLYDEILG- 139
Query: 1146 LALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCML 1322
+ W+ +E + D+ Y+ +++ L + + E S G V T N ++
Sbjct: 140 -VVHWM--IEGFGLKPDTHFYNRMLNLLVDGNNLKLVEVAHTEMSVWGIKPDVSTFNVLI 196
Query: 1323 RGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSD 1502
+ R A+ + + M G +PD T+ I+ ++ ++ AL I M + G
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREHMVEFGCS 256
Query: 1503 LDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVF 1682
+ + G C+ GR ++DA+ F
Sbjct: 257 WSNVSVNVIVHGFCKEGR-----------------------------------VEDALNF 281
Query: 1683 LNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANI 1862
+ +M + G P+ ++ L+ GLCK +K A ++++ M++ +P TYN +I
Sbjct: 282 IQEMSNQGGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 1863 SLGQLQDAEQLYDFAMQRGIRPS 1931
LG++++A ++ D + R P+
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPN 364
>XP_015889158.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Ziziphus jujuba]
Length = 756
Score = 219 bits (559), Expect = 2e-57
Identities = 133/485 (27%), Positives = 234/485 (48%), Gaps = 2/485 (0%)
Frame = +3
Query: 480 HVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKG 659
H LR Q D + LR F+WA + + + Y + L + F+ R ++EEM+ + G
Sbjct: 59 HTLRRQHDESSALRIFQWASRQPNFVPSSYVYEELLRKLAKVGSFESMRGVLEEMK-LAG 117
Query: 660 FEIPKSVFNVMVKGYGYEGMISMALEMFQKMKN-LGHKPSLGAFNAVMKGLVQSDDLEVM 836
+I F + V+ Y + L + + M+N G KP FN ++ LV + L+++
Sbjct: 118 CKISGGTFLIFVESYSKFDLHDEILGILEVMENEFGVKPDTHFFNFLLNVLVDGNKLKLV 177
Query: 837 QILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISA 1016
+ H M GI + +T++ LI+ +C +M ++G+ PD +T ++
Sbjct: 178 ETAHSGMVIRGIKPDVSTFNILIKALCRAHQIRPAILMMEEMSSYGLTPDETTFTTLMQG 237
Query: 1017 LCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKD 1196
++G+ A I + M GC T N +I G E R + AL +LQ M D D
Sbjct: 238 YIEEGDTTGALRINDQMVQYGCPCTNITVNVLINGFCKEGRIEEALSFLQGMANDGFLPD 297
Query: 1197 SFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYLREKNDYEAMKLYD 1373
FTY+ L++GLC++G + A E+ G L + N ++ G + EA+++ +
Sbjct: 298 QFTYNTLVNGLCRAGHVKHALEIMDVILQRGFDLDIFSYNSLISGLCKLGEVEEAVEILE 357
Query: 1374 KMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVG 1553
+M C P+ TY +I + N+V EA + + G D + +GLC G
Sbjct: 358 QMVSRDCPPNTVTYNTLISTLCKDNQVTEATELARVLTSKGILPDVCTFNSLIQGLCMTG 417
Query: 1554 RHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIY 1733
++ ++ ++ KG D Y + I+++ + G + DA+ L +M +++G NV +Y
Sbjct: 418 NYKFALELFEEMKHKGCQPDEFTYNMLIDSYCSRGRLKDALNLLKEM-ESSGCARNVVVY 476
Query: 1734 DALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQ 1913
+ L+ GLCK KR++EA + + M I TYN LI ++++A QL D +
Sbjct: 477 NTLIDGLCKSKRIEEAEQIFDQMELQGISRNSVTYNTLIDGLCQNRRVEEASQLMDQMIM 536
Query: 1914 RGIRP 1928
G++P
Sbjct: 537 EGLKP 541
Score = 181 bits (460), Expect = 3e-44
Identities = 116/457 (25%), Positives = 221/457 (48%), Gaps = 4/457 (0%)
Frame = +3
Query: 564 PETYSAIFTILVRAKMFDEARAMMEEMES---IKGFEIPKSVFNVMVKGYGYEGMISMAL 734
P+T+ F L+ + ++E S I+G + S FN+++K I A+
Sbjct: 156 PDTH--FFNFLLNVLVDGNKLKLVETAHSGMVIRGIKPDVSTFNILIKALCRAHQIRPAI 213
Query: 735 EMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCM 914
M ++M + G P F +M+G ++ D ++ QM + G T + LI
Sbjct: 214 LMMEEMSSYGLTPDETTFTTLMQGYIEEGDTTGALRINDQMVQYGCPCTNITVNVLINGF 273
Query: 915 CSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNG 1094
C M N G PD + Y +++ LC+ G++ A EI++++ G + +
Sbjct: 274 CKEGRIEEALSFLQGMANDGFLPDQFTYNTLVNGLCRAGHVKHALEIMDVILQRGFDLDI 333
Query: 1095 FTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLE 1274
F+YN++I GL + A+E L++M + P ++ TY+ LI LCK + +A E+
Sbjct: 334 FSYNSLISGLCKLGEVEEAVEILEQMVSRDCPPNTVTYNTLISTLCKDNQVTEATELARV 393
Query: 1275 ASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNE 1451
+++G L V T N +++G N A++L+++M+ GC PD +TY ++I +
Sbjct: 394 LTSKGILPDVCTFNSLIQGLCMTGNYKFALELFEEMKHKGCQPDEFTYNMLIDSYCSRGR 453
Query: 1452 VLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYL 1631
+ +AL++ EM +G + + + GLC+ R EE + + +G+S ++ Y
Sbjct: 454 LKDALNLLKEMESSGCARNVVVYNTLIDGLCKSKRIEEAEQIFDQMELQGISRNSVTYNT 513
Query: 1632 AINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEH 1811
I+ +++A ++ MI G +P+ Y++LL C+ +K+A D++ +M +
Sbjct: 514 LIDGLCQNRRVEEASQLMDQMI-MEGLKPDKFTYNSLLTYFCRTGDIKKAADIVQTMTSN 572
Query: 1812 EIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
EP TY +I G+++ A +L +G+
Sbjct: 573 GCEPDIVTYGTIIGGLCKAGRVEAASRLLRTVQMKGM 609
Score = 168 bits (426), Expect = 6e-40
Identities = 115/436 (26%), Positives = 203/436 (46%), Gaps = 2/436 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
+EA + ++ M + GF + +N +V G G + ALE+ + G + ++N+
Sbjct: 280 EEALSFLQGMAN-DGFLPDQFTYNTLVNGLCRAGHVKHALEIMDVILQRGFDLDIFSYNS 338
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
++ GL + ++E + +QM N TY+ LI +C + + G
Sbjct: 339 LISGLCKLGEVEEAVEILEQMVSRDCPPNTVTYNTLISTLCKDNQVTEATELARVLTSKG 398
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC GN A E+ E M++ GC P+ FTYN +I + R AL
Sbjct: 399 ILPDVCTFNSLIQGLCMTGNYKFALELFEEMKHKGCQPDEFTYNMLIDSYCSRGRLKDAL 458
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
L++ME ++ Y+ LIDGLCKS + +A+++F + +G +SVT N ++ G
Sbjct: 459 NLLKEMESSGCARNVVVYNTLIDGLCKSKRIEEAEQIFDQMELQGISRNSVTYNTLIDGL 518
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ + EA +L D+M G PD +TY ++ R ++ +A I M NG + D
Sbjct: 519 CQNRRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRTGDIKKAADIVQTMTSNGCEPDI 578
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR E + ++ KG+ Y I A +A+ +
Sbjct: 579 VTYGTIIGGLCKAGRVEAASRLLRTVQMKGMVLTPQAYNPVIQALFKRKRTKEAMRLFRE 638
Query: 1692 MIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
M++ P+ + + +GLC + EA D + MIE P+ +++ +L + +L
Sbjct: 639 MVEKAD-PPDAISHKIVYRGLCNGGGPIGEAVDFMVEMIEKGFLPEFSSFVMLAEGLCAL 697
Query: 1869 GQLQDAEQLYDFAMQR 1916
+L D M++
Sbjct: 698 SMEDTLIKLVDIVMEK 713
Score = 124 bits (311), Expect = 1e-25
Identities = 95/385 (24%), Positives = 171/385 (44%), Gaps = 2/385 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T++++ L + A + EEM+ KG + + +N+++ Y G + AL + ++
Sbjct: 405 TFNSLIQGLCMTGNYKFALELFEEMKH-KGCQPDEFTYNMLIDSYCSRGRLKDALNLLKE 463
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M++ G ++ +N ++ GL +S +E + + QME GI N TY+ LI +C
Sbjct: 464 MESSGCARNVVVYNTLIDGLCKSKRIEEAEQIFDQMELQGISRNSVTYNTLIDGLCQNRR 523
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
MI G+KPD + Y +++ C+ G+I KA +IV+ M +NGC P+ TY
Sbjct: 524 VEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRTGDIKKAADIVQTMTSNGCEPDIVTYGT 583
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
I I GLCK+G + A + +G
Sbjct: 584 I-----------------------------------IGGLCKAGRVEAASRLLRTVQMKG 608
Query: 1290 Q-LSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIII-GLHLRHNEVLEA 1463
L+ N +++ + K EAM+L+ +M E PD +++I+ GL + EA
Sbjct: 609 MVLTPQAYNPVIQALFKRKRTKEAMRLFREMVEKADPPDAISHKIVYRGLCNGGGPIGEA 668
Query: 1464 LSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINA 1643
+ EM + G + +A+GLC + + ++ EK D D ++
Sbjct: 669 VDFMVEMIEKGFLPEFSSFVMLAEGLCALSMEDTLIKLVDIVMEKAKLLD--DEVSMVSG 726
Query: 1644 FATLGEMDDAIVFLNDMIDTTGRRP 1718
F + + DA+ L ++D+ R+P
Sbjct: 727 FLKINKFRDALATLGGILDS--RKP 749
Score = 99.8 bits (247), Expect = 7e-18
Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 2/320 (0%)
Frame = +3
Query: 981 PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEW 1160
P Y Y ++ L K G+ + ++E M+ GC +G T+ + D L
Sbjct: 85 PSSYVYEELLRKLAKVGSFESMRGVLEEMKLAGCKISGGTFLIFVESYSKFDLHDEILGI 144
Query: 1161 LQKMEQD-NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYL 1334
L+ ME + + D+ ++ L++ L + + G V T N +++
Sbjct: 145 LEVMENEFGVKPDTHFFNFLLNVLVDGNKLKLVETAHSGMVIRGIKPDVSTFNILIKALC 204
Query: 1335 REKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTP 1514
R A+ + ++M G PD T+ ++ ++ + AL I +M + G
Sbjct: 205 RAHQIRPAILMMEEMSSYGLTPDETTFTTLMQGYIEEGDTTGALRINDQMVQYGCPCTNI 264
Query: 1515 LLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDM 1694
+ + G C+ GR EE F + + G D Y +N G + A+ + D+
Sbjct: 265 TVNVLINGFCKEGRIEEALSFLQGMANDGFLPDQFTYNTLVNGLCRAGHVKHALEIM-DV 323
Query: 1695 IDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQ 1874
I G ++ Y++L+ GLCK ++EA ++L M+ + P TYN LI Q
Sbjct: 324 ILQRGFDLDIFSYNSLISGLCKLGEVEEAVEILEQMVSRDCPPNTVTYNTLISTLCKDNQ 383
Query: 1875 LQDAEQLYDFAMQRGIRPSI 1934
+ +A +L +GI P +
Sbjct: 384 VTEATELARVLTSKGILPDV 403
>KZV35051.1 pentatricopeptide repeat-containing protein chloroplastic-like
[Dorcoceras hygrometricum]
Length = 758
Score = 218 bits (555), Expect = 6e-57
Identities = 134/490 (27%), Positives = 241/490 (49%), Gaps = 2/490 (0%)
Frame = +3
Query: 465 PLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEM 644
P + LR +++ LR F+WA + +A Y I L A FD R ++++M
Sbjct: 58 PKQLLDTLRGEDNGTSALRVFEWASKQPNFAPTLTIYGEILRKLGEAGSFDSMRQVLDDM 117
Query: 645 ESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKN-LGHKPSLGAFNAVMKGLVQSD 821
+ ++ + +F V++ Y + A+ + M+N G +P ++N ++ LV+ +
Sbjct: 118 KH-SDVKVVEGIFFVLIDSYAKFSLYDEAVGVLDLMENEFGVRPGTHSYNFLLNVLVEGN 176
Query: 822 DLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYT 1001
L +++ +H +M G+ + +T++ LI+ +C +M N+G+ PD YT
Sbjct: 177 KLIMVETVHSRMLNYGVKPDVSTFNILIKALCKAHQIRPAMLMMEEMPNYGLAPDEKTYT 236
Query: 1002 IVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQD 1181
++ ++GN++ A + +M GC + T N +I G E R + AL ++Q+M +
Sbjct: 237 TIMQGYIEEGNVEGALRVRAVMVAVGCPWSNVTINVLINGFCKEGRIEEALLFVQEMADE 296
Query: 1182 NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEA 1358
D FT++ LI GLCK GF++ A EV EG V T N ++ G R + EA
Sbjct: 297 GFCPDHFTFNTLISGLCKVGFVNHAMEVLDLMLQEGFDPDVFTFNSVISGLCRIGDVEEA 356
Query: 1359 MKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKG 1538
+++ ++M C P+ TY II + N V EA + + NG D + +G
Sbjct: 357 IEVVNQMLSRDCSPNAVTYNTIISTLCKENHVEEATELARILTSNGVLPDVSTFNSLIQG 416
Query: 1539 LCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRP 1718
LC G + ++ KG D Y + ++ T G++D+A+ L DM +++G
Sbjct: 417 LCLSGHFSIVMELFFEMKAKGCRPDEFTYNILMDCLCTKGKLDEALELLKDM-ESSGCAR 475
Query: 1719 NVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQLY 1898
+V Y+ L+ G CK +R++EA ++ + M + TYN LI G++++A QL
Sbjct: 476 SVITYNTLIDGFCKSRRVEEAEEIFDQMELQGVSRNLVTYNTLIDGLSKSGRMEEAAQLM 535
Query: 1899 DFAMQRGIRP 1928
D + G++P
Sbjct: 536 DQMIMEGLKP 545
Score = 177 bits (448), Expect = 9e-43
Identities = 114/459 (24%), Positives = 215/459 (46%), Gaps = 1/459 (0%)
Frame = +3
Query: 549 GYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISM 728
G +Y+ + +LV + M + G + S FN+++K I
Sbjct: 157 GVRPGTHSYNFLLNVLVEGNKLIMVETVHSRMLNY-GVKPDVSTFNILIKALCKAHQIRP 215
Query: 729 ALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIR 908
A+ M ++M N G P + +M+G ++ ++E + M +G + T + LI
Sbjct: 216 AMLMMEEMPNYGLAPDEKTYTTIMQGYIEEGNVEGALRVRAVMVAVGCPWSNVTINVLIN 275
Query: 909 CMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNP 1088
C +M + G PD + + +IS LCK G ++ A E+++LM G +P
Sbjct: 276 GFCKEGRIEEALLFVQEMADEGFCPDHFTFNTLISGLCKVGFVNHAMEVLDLMLQEGFDP 335
Query: 1089 NGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVF 1268
+ FT+N++I GL + A+E + +M + ++ TY+ +I LCK + +A E+
Sbjct: 336 DVFTFNSVISGLCRIGDVEEAIEVVNQMLSRDCSPNAVTYNTIISTLCKENHVEEATELA 395
Query: 1269 LEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRH 1445
++ G L V T N +++G + M+L+ +M+ GC PD +TY I++
Sbjct: 396 RILTSNGVLPDVSTFNSLIQGLCLSGHFSIVMELFFEMKAKGCRPDEFTYNILMDCLCTK 455
Query: 1446 NEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDY 1625
++ EAL + +M +G + G C+ R EE + + +GVS + Y
Sbjct: 456 GKLDEALELLKDMESSGCARSVITYNTLIDGFCKSRRVEEAEEIFDQMELQGVSRNLVTY 515
Query: 1626 YLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMI 1805
I+ + G M++A ++ MI G +P+ Y+++L C++ +K+A D++ +M
Sbjct: 516 NTLIDGLSKSGRMEEAAQLMDQMI-MEGLKPDKFTYNSVLSHFCREGDIKKAADIVQTMT 574
Query: 1806 EHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
+ EP TY LI+ G+++ A +L +G+
Sbjct: 575 SNGCEPDVVTYGTLIQGLCKAGRVEVASKLLRSIQMKGM 613
Score = 169 bits (427), Expect = 5e-40
Identities = 119/451 (26%), Positives = 202/451 (44%), Gaps = 1/451 (0%)
Frame = +3
Query: 549 GYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISM 728
G + T++ + L +A A MMEEM + G + + +++GY EG +
Sbjct: 192 GVKPDVSTFNILIKALCKAHQIRPAMLMMEEMPNY-GLAPDEKTYTTIMQGYIEEGNVEG 250
Query: 729 ALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIR 908
AL + M +G S N ++ G + +E + Q+M + G + T++ LI
Sbjct: 251 ALRVRAVMVAVGCPWSNVTINVLINGFCKEGRIEEALLFVQEMADEGFCPDHFTFNTLIS 310
Query: 909 CMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNP 1088
+C M+ G PD++ + VIS LC+ G++++A E+V M + C+P
Sbjct: 311 GLCKVGFVNHAMEVLDLMLQEGFDPDVFTFNSVISGLCRIGDVEEAIEVVNQMLSRDCSP 370
Query: 1089 NGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVF 1268
N TYN II L E + A E + + + + D T++ LI GLC SG E+F
Sbjct: 371 NAVTYNTIISTLCKENHVEEATELARILTSNGVLPDVSTFNSLIQGLCLSGHFSIVMELF 430
Query: 1269 LEASAEG-QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRH 1445
E A+G + T N ++ + EA++L M GC TY +I +
Sbjct: 431 FEMKAKGCRPDEFTYNILMDCLCTKGKLDEALELLKDMESSGCARSVITYNTLIDGFCKS 490
Query: 1446 NEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDY 1625
V EA I+ +M G + + GL + GR EE + +G+ D Y
Sbjct: 491 RRVEEAEEIFDQMELQGVSRNLVTYNTLIDGLSKSGRMEEAAQLMDQMIMEGLKPDKFTY 550
Query: 1626 YLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMI 1805
++ F G++ A + M + G P+V Y L++GLCK R++ A +L S+
Sbjct: 551 NSVLSHFCREGDIKKAADIVQTMT-SNGCEPDVVTYGTLIQGLCKAGRVEVASKLLRSIQ 609
Query: 1806 EHEIEPQPATYNILIKANISLGQLQDAEQLY 1898
+ P YN +I+A ++ +A + +
Sbjct: 610 MKGMVLTPRAYNPIIQALFKRKRVNEAMRFF 640
Score = 149 bits (376), Expect = 1e-33
Identities = 108/458 (23%), Positives = 203/458 (44%), Gaps = 1/458 (0%)
Frame = +3
Query: 546 EGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMIS 725
EG+ + T++ + + L + + A +++ M +GF+ FN ++ G G +
Sbjct: 296 EGFCPDHFTFNTLISGLCKVGFVNHAMEVLDLMLQ-EGFDPDVFTFNSVISGLCRIGDVE 354
Query: 726 MALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLI 905
A+E+ +M + P+ +N ++ L + + +E L + + G+ + +T++ LI
Sbjct: 355 EAIEVVNQMLSRDCSPNAVTYNTIISTLCKENHVEEATELARILTSNGVLPDVSTFNSLI 414
Query: 906 RCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCN 1085
+ +C ++M G +PD + Y I++ LC G +D+A E+++ M ++GC
Sbjct: 415 QGLCLSGHFSIVMELFFEMKAKGCRPDEFTYNILMDCLCTKGKLDEALELLKDMESSGCA 474
Query: 1086 PNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEV 1265
+ TYN +I G +R + A E +ME + ++ TY+ LIDGL KSG M
Sbjct: 475 RSVITYNTLIDGFCKSRRVEEAEEIFDQMELQGVSRNLVTYNTLIDGLSKSGRME----- 529
Query: 1266 FLEASAEGQLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRH 1445
EA +L D+M G PD +TY ++ R
Sbjct: 530 -----------------------------EAAQLMDQMIMEGLKPDKFTYNSVLSHFCRE 560
Query: 1446 NEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDY 1625
++ +A I M NG + D + +GLC+ GR E + ++ KG+ Y
Sbjct: 561 GDIKKAADIVQTMTSNGCEPDVVTYGTLIQGLCKAGRVEVASKLLRSIQMKGMVLTPRAY 620
Query: 1626 YLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSM 1802
I A +++A+ F +M + P+ Y + +GLC + EA D M
Sbjct: 621 NPIIQALFKRKRVNEAMRFFREM-EGKCDPPDAISYKIVFRGLCSGGGPIGEAVDFAFEM 679
Query: 1803 IEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQR 1916
E P+ + +N+L + +L + +L D +++
Sbjct: 680 TEKGFLPESSPFNMLAEGLCALNMEETLLKLVDKIVEK 717
Score = 89.4 bits (220), Expect = 1e-14
Identities = 75/351 (21%), Positives = 143/351 (40%), Gaps = 1/351 (0%)
Frame = +3
Query: 885 TTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVEL 1064
T Y ++R + DM + +K + ++I + K D+A +++L
Sbjct: 92 TIYGEILRKLGEAGSFDSMRQVLDDMKHSDVKVVEGIFFVLIDSYAKFSLYDEAVGVLDL 151
Query: 1065 MRNN-GCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSG 1241
M N G P +YN ++ L + + +M + D T++ILI LCK+
Sbjct: 152 MENEFGVRPGTHSYNFLLNVLVEGNKLIMVETVHSRMLNYGVKPDVSTFNILIKALCKA- 210
Query: 1242 FMHKAKEVFLEASAEGQLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRI 1421
H+ + AM + ++M G PD TY
Sbjct: 211 --HQIRP-------------------------------AMLMMEEMPNYGLAPDEKTYTT 237
Query: 1422 IIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKG 1601
I+ ++ V AL + M G + + G C+ GR EE F + + ++G
Sbjct: 238 IMQGYIEEGNVEGALRVRAVMVAVGCPWSNVTINVLINGFCKEGRIEEALLFVQEMADEG 297
Query: 1602 VSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEA 1781
D + I+ +G ++ A+ L+ M+ G P+V +++++ GLC+ ++EA
Sbjct: 298 FCPDHFTFNTLISGLCKVGFVNHAMEVLDLMLQE-GFDPDVFTFNSVISGLCRIGDVEEA 356
Query: 1782 HDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGIRPSI 1934
+++N M+ + P TYN +I +++A +L G+ P +
Sbjct: 357 IEVVNQMLSRDCSPNAVTYNTIISTLCKENHVEEATELARILTSNGVLPDV 407
>XP_004142210.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Cucumis sativus]
Length = 768
Score = 218 bits (555), Expect = 7e-57
Identities = 139/494 (28%), Positives = 234/494 (47%), Gaps = 6/494 (1%)
Frame = +3
Query: 465 PLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEM 644
P + LR Q D LR F WA + + + Y I L +A F+ R ++EEM
Sbjct: 64 PKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEM 123
Query: 645 ESIKGFEIPKSVFNVMVKGYG----YEGMISMALEMFQKMKNLGHKPSLGAFNAVMKGLV 812
+ + G E + +F + V+ YG Y+ ++ + M + + KP +N ++ LV
Sbjct: 124 K-LSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRI---KPDTRFYNVLLNVLV 179
Query: 813 QSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIY 992
++ L++++ H M I + +T++ LI+ +C +M ++G+ PD
Sbjct: 180 DANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDET 239
Query: 993 NYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKM 1172
+T ++ + GN+D A I E M GC T N +I G + R D AL ++Q+
Sbjct: 240 TFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA 299
Query: 1173 EQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSS--VTCNCMLRGYLREKN 1346
+ D FTY+ L++GLCK G A EV ++A G L T N ++ G +
Sbjct: 300 VSEGFRPDQFTYNTLVNGLCKIGHAKHAMEV-VDAMLLGGLDPDIYTYNSLISGLCKLGE 358
Query: 1347 DYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKK 1526
EA+K+ D+M C P+ TY II + N V EA I + G D
Sbjct: 359 IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNS 418
Query: 1527 MAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTT 1706
+ +GLC H+ ++ ++ KG D Y + I++ + ++++A+ L +M +
Sbjct: 419 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM-ELN 477
Query: 1707 GRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDA 1886
G NV IY+ L+ G CK KR++EA ++ + M + TYN LI +++DA
Sbjct: 478 GCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDA 537
Query: 1887 EQLYDFAMQRGIRP 1928
QL D + G+RP
Sbjct: 538 AQLMDQMIMEGLRP 551
Score = 189 bits (479), Expect = 9e-47
Identities = 124/463 (26%), Positives = 220/463 (47%), Gaps = 6/463 (1%)
Frame = +3
Query: 552 YAHNPET--YSAIFTILVRA---KMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEG 716
Y P+T Y+ + +LV A K+ + A + M + S FN+++K
Sbjct: 162 YRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVR----RRIRHDVSTFNILIKALCKAH 217
Query: 717 MISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYS 896
+ A+ M ++M + G P F +M+G ++ +L+ + +QM E G T +
Sbjct: 218 QVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVN 277
Query: 897 HLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNN 1076
LI C + ++ G +PD + Y +++ LCK G+ A E+V+ M
Sbjct: 278 VLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLG 337
Query: 1077 GCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKA 1256
G +P+ +TYN++I GL + A++ L +M + ++ TY+ +I LCK + +A
Sbjct: 338 GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEA 397
Query: 1257 KEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGL 1433
E+ +++G L V T N +++G N AM L+++M+ GC PD +TY ++I
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457
Query: 1434 HLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYD 1613
++ EAL++ EM NG + + + G C+ R EE + + +GVS D
Sbjct: 458 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD 517
Query: 1614 ASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDML 1793
+ Y I+ ++DA ++ MI G RP+ Y++LL CK +K+A D++
Sbjct: 518 SVTYNTLIDGLCKSKRVEDAAQLMDQMI-MEGLRPDKFTYNSLLTHFCKTGDIKKAADIV 576
Query: 1794 NSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
+M P TY LI G++Q A +L +G+
Sbjct: 577 QTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGM 619
Score = 167 bits (423), Expect = 2e-39
Identities = 113/436 (25%), Positives = 202/436 (46%), Gaps = 2/436 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
D+A + ++E S +GF + +N +V G G A+E+ M G P + +N+
Sbjct: 290 DQALSFIQEAVS-EGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNS 348
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
++ GL + ++E + QM N TY+ +I +C + + G
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC N A ++ E M+ GC P+ FTYN +I L + ++ + AL
Sbjct: 409 ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEAL 468
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
L++ME + ++ Y+ LIDG CK+ + +A+E+F E +G SVT N ++ G
Sbjct: 469 NLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGL 528
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ K +A +L D+M G PD +TY ++ + ++ +A I M +G + D
Sbjct: 529 CKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDI 588
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR + + ++ KG+ Y I A +A+ +
Sbjct: 589 VTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFRE 648
Query: 1692 MIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
M+D + P+ Y + +GLC + EA D MIE P+ +++ +L + +L
Sbjct: 649 MLDKS-EPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTL 707
Query: 1869 GQLQDAEQLYDFAMQR 1916
+L D M++
Sbjct: 708 SMDDTLVKLVDMIMEK 723
Score = 107 bits (268), Expect = 2e-20
Identities = 86/378 (22%), Positives = 160/378 (42%), Gaps = 1/378 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T++++ L + A + EEM+ KG + +N+++ + AL + ++
Sbjct: 415 TFNSLIQGLCLSSNHKSAMDLFEEMKG-KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 473
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M+ G ++ +N ++ G ++ +E + + +ME G+ + TY+ LI +C
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKR 533
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
MI G++PD + Y +++ CK G+I KA +IV+ M ++GCNP+ TY
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL R +A L+ ++ + Y+ +I L K H
Sbjct: 594 LISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTH------------- 640
Query: 1290 QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIII-GLHLRHNEVLEAL 1466
EAM+L+ +M + PD TY+I+ GL + EA+
Sbjct: 641 ---------------------EAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAV 679
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAF 1646
EM + G+ + +A+GLC + + M+ EK + I F
Sbjct: 680 DFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSERE--ISTIRGF 737
Query: 1647 ATLGEMDDAIVFLNDMID 1700
+ + DA+ L ++D
Sbjct: 738 LKIRKFQDALSTLGGILD 755
Score = 89.4 bits (220), Expect = 1e-14
Identities = 70/334 (20%), Positives = 143/334 (42%), Gaps = 9/334 (2%)
Frame = +3
Query: 960 MINWGIK-----PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGL 1124
+ NW K P Y ++ L K G+ + ++E M+ +GC + + +
Sbjct: 83 VFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESY 142
Query: 1125 YNEKRPDLALEWLQKMEQD-NIPKDSFTYSILIDGLC---KSGFMHKAKEVFLEASAEGQ 1292
+ D + ++ ME + I D+ Y++L++ L K + A +
Sbjct: 143 GKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHD 202
Query: 1293 LSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSI 1472
+S T N +++ + A+ + ++M G PD T+ I+ ++ + AL I
Sbjct: 203 VS--TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRI 260
Query: 1473 YHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFAT 1652
+M + G + + G C+ GR ++ F + +G D Y +N
Sbjct: 261 KEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCK 320
Query: 1653 LGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPA 1832
+G A+ ++ M+ G P++ Y++L+ GLCK ++EA +L+ M+ + P
Sbjct: 321 IGHAKHAMEVVDAML-LGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAV 379
Query: 1833 TYNILIKANISLGQLQDAEQLYDFAMQRGIRPSI 1934
TYN +I + ++ +A ++ +GI P +
Sbjct: 380 TYNAIISSLCKENRVDEATEIARLLTSKGILPDV 413
>KGN54231.1 hypothetical protein Csa_4G294390 [Cucumis sativus]
Length = 818
Score = 218 bits (555), Expect = 1e-56
Identities = 139/494 (28%), Positives = 234/494 (47%), Gaps = 6/494 (1%)
Frame = +3
Query: 465 PLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEM 644
P + LR Q D LR F WA + + + Y I L +A F+ R ++EEM
Sbjct: 114 PKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEM 173
Query: 645 ESIKGFEIPKSVFNVMVKGYG----YEGMISMALEMFQKMKNLGHKPSLGAFNAVMKGLV 812
+ + G E + +F + V+ YG Y+ ++ + M + + KP +N ++ LV
Sbjct: 174 K-LSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRI---KPDTRFYNVLLNVLV 229
Query: 813 QSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIY 992
++ L++++ H M I + +T++ LI+ +C +M ++G+ PD
Sbjct: 230 DANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDET 289
Query: 993 NYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKM 1172
+T ++ + GN+D A I E M GC T N +I G + R D AL ++Q+
Sbjct: 290 TFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA 349
Query: 1173 EQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSS--VTCNCMLRGYLREKN 1346
+ D FTY+ L++GLCK G A EV ++A G L T N ++ G +
Sbjct: 350 VSEGFRPDQFTYNTLVNGLCKIGHAKHAMEV-VDAMLLGGLDPDIYTYNSLISGLCKLGE 408
Query: 1347 DYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKK 1526
EA+K+ D+M C P+ TY II + N V EA I + G D
Sbjct: 409 IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNS 468
Query: 1527 MAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTT 1706
+ +GLC H+ ++ ++ KG D Y + I++ + ++++A+ L +M +
Sbjct: 469 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM-ELN 527
Query: 1707 GRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDA 1886
G NV IY+ L+ G CK KR++EA ++ + M + TYN LI +++DA
Sbjct: 528 GCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDA 587
Query: 1887 EQLYDFAMQRGIRP 1928
QL D + G+RP
Sbjct: 588 AQLMDQMIMEGLRP 601
Score = 189 bits (479), Expect = 1e-46
Identities = 124/463 (26%), Positives = 220/463 (47%), Gaps = 6/463 (1%)
Frame = +3
Query: 552 YAHNPET--YSAIFTILVRA---KMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEG 716
Y P+T Y+ + +LV A K+ + A + M + S FN+++K
Sbjct: 212 YRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVR----RRIRHDVSTFNILIKALCKAH 267
Query: 717 MISMALEMFQKMKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYS 896
+ A+ M ++M + G P F +M+G ++ +L+ + +QM E G T +
Sbjct: 268 QVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVN 327
Query: 897 HLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNN 1076
LI C + ++ G +PD + Y +++ LCK G+ A E+V+ M
Sbjct: 328 VLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLG 387
Query: 1077 GCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKA 1256
G +P+ +TYN++I GL + A++ L +M + ++ TY+ +I LCK + +A
Sbjct: 388 GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEA 447
Query: 1257 KEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGL 1433
E+ +++G L V T N +++G N AM L+++M+ GC PD +TY ++I
Sbjct: 448 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 507
Query: 1434 HLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYD 1613
++ EAL++ EM NG + + + G C+ R EE + + +GVS D
Sbjct: 508 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD 567
Query: 1614 ASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDML 1793
+ Y I+ ++DA ++ MI G RP+ Y++LL CK +K+A D++
Sbjct: 568 SVTYNTLIDGLCKSKRVEDAAQLMDQMI-MEGLRPDKFTYNSLLTHFCKTGDIKKAADIV 626
Query: 1794 NSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQRGI 1922
+M P TY LI G++Q A +L +G+
Sbjct: 627 QTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGM 669
Score = 167 bits (423), Expect = 2e-39
Identities = 113/436 (25%), Positives = 202/436 (46%), Gaps = 2/436 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
D+A + ++E S +GF + +N +V G G A+E+ M G P + +N+
Sbjct: 340 DQALSFIQEAVS-EGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNS 398
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
++ GL + ++E + QM N TY+ +I +C + + G
Sbjct: 399 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 458
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC N A ++ E M+ GC P+ FTYN +I L + ++ + AL
Sbjct: 459 ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEAL 518
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
L++ME + ++ Y+ LIDG CK+ + +A+E+F E +G SVT N ++ G
Sbjct: 519 NLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGL 578
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ K +A +L D+M G PD +TY ++ + ++ +A I M +G + D
Sbjct: 579 CKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDI 638
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR + + ++ KG+ Y I A +A+ +
Sbjct: 639 VTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFRE 698
Query: 1692 MIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
M+D + P+ Y + +GLC + EA D MIE P+ +++ +L + +L
Sbjct: 699 MLDKS-EPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTL 757
Query: 1869 GQLQDAEQLYDFAMQR 1916
+L D M++
Sbjct: 758 SMDDTLVKLVDMIMEK 773
Score = 107 bits (268), Expect = 2e-20
Identities = 86/378 (22%), Positives = 160/378 (42%), Gaps = 1/378 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T++++ L + A + EEM+ KG + +N+++ + AL + ++
Sbjct: 465 TFNSLIQGLCLSSNHKSAMDLFEEMKG-KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 523
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M+ G ++ +N ++ G ++ +E + + +ME G+ + TY+ LI +C
Sbjct: 524 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKR 583
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
MI G++PD + Y +++ CK G+I KA +IV+ M ++GCNP+ TY
Sbjct: 584 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 643
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL R +A L+ ++ + Y+ +I L K H
Sbjct: 644 LISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTH------------- 690
Query: 1290 QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIII-GLHLRHNEVLEAL 1466
EAM+L+ +M + PD TY+I+ GL + EA+
Sbjct: 691 ---------------------EAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAV 729
Query: 1467 SIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAF 1646
EM + G+ + +A+GLC + + M+ EK + I F
Sbjct: 730 DFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSERE--ISTIRGF 787
Query: 1647 ATLGEMDDAIVFLNDMID 1700
+ + DA+ L ++D
Sbjct: 788 LKIRKFQDALSTLGGILD 805
Score = 89.4 bits (220), Expect = 1e-14
Identities = 70/334 (20%), Positives = 143/334 (42%), Gaps = 9/334 (2%)
Frame = +3
Query: 960 MINWGIK-----PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGL 1124
+ NW K P Y ++ L K G+ + ++E M+ +GC + + +
Sbjct: 133 VFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESY 192
Query: 1125 YNEKRPDLALEWLQKMEQD-NIPKDSFTYSILIDGLC---KSGFMHKAKEVFLEASAEGQ 1292
+ D + ++ ME + I D+ Y++L++ L K + A +
Sbjct: 193 GKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHD 252
Query: 1293 LSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSI 1472
+S T N +++ + A+ + ++M G PD T+ I+ ++ + AL I
Sbjct: 253 VS--TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRI 310
Query: 1473 YHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFAT 1652
+M + G + + G C+ GR ++ F + +G D Y +N
Sbjct: 311 KEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCK 370
Query: 1653 LGEMDDAIVFLNDMIDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPA 1832
+G A+ ++ M+ G P++ Y++L+ GLCK ++EA +L+ M+ + P
Sbjct: 371 IGHAKHAMEVVDAML-LGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAV 429
Query: 1833 TYNILIKANISLGQLQDAEQLYDFAMQRGIRPSI 1934
TYN +I + ++ +A ++ +GI P +
Sbjct: 430 TYNAIISSLCKENRVDEATEIARLLTSKGILPDV 463
>XP_002876221.1 hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata] EFH52480.1 hypothetical protein ARALYDRAFT_906766
[Arabidopsis lyrata subsp. lyrata]
Length = 754
Score = 216 bits (549), Expect = 4e-56
Identities = 135/484 (27%), Positives = 238/484 (49%), Gaps = 3/484 (0%)
Frame = +3
Query: 486 LRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEMESIKGFE 665
LR Q D + LR F A + ++ P Y I L R+ FD+ R ++E+M++ G E
Sbjct: 57 LRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKN-SGCE 115
Query: 666 IPKSVFNVMVKGYGYEGMISMALEMFQKM-KNLGHKPSLGAFNAVMKGLVQSDDLEVMQI 842
+ S F ++++ Y + L + M + G KP +N ++ LV ++L++++I
Sbjct: 116 MGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEI 175
Query: 843 LHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYTIVISALC 1022
H +M GI + +T++ LI+ +C DM ++G+ PD +T ++
Sbjct: 176 AHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYI 235
Query: 1023 KDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKM-EQDNIPKDS 1199
++G++D A I E M GC+ + + N I+ G E R + AL ++Q+M QD D
Sbjct: 236 EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 295
Query: 1200 FTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEAMKLYDK 1376
+T++ L++GLCK+G + A E+ EG V T N ++ G + EA++ D+
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQ 355
Query: 1377 MREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKGLCRVGR 1556
M C P+ TY +I + N+V EA + + G D + +GLC
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 1557 HEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRPNVTIYD 1736
H ++ +R KG D Y + I++ + G++D+A+ L M + +G +V Y+
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYN 474
Query: 1737 ALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQLYDFAMQR 1916
L+ G CK +++EA ++ + M H + TYN LI +++DA QL D +
Sbjct: 475 TLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIME 534
Query: 1917 GIRP 1928
G +P
Sbjct: 535 GQKP 538
Score = 186 bits (473), Expect = 5e-46
Identities = 125/473 (26%), Positives = 221/473 (46%), Gaps = 2/473 (0%)
Frame = +3
Query: 615 DEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNA 794
++A ++EM + GF + FN +V G G + A+E+ M G+ P + +N+
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 795 VMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWG 974
V+ GL + +++ QM N TY+ LI +C + + G
Sbjct: 336 VISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 975 IKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLAL 1154
I PD+ + +I LC N A E+ E MR+ GC P+ FTYN +I L ++ + D AL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 1155 EWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGY 1331
L++ME + TY+ LIDG CK+ + +A+E+F E G +SVT N ++ G
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 1332 LREKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDT 1511
+ + +A +L D+M G PD +TY ++ R ++ +A I M NG + D
Sbjct: 516 CKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 1512 PLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLND 1691
+ GLC+ GR E + ++ KG++ Y I + +AI +
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFRE 635
Query: 1692 MIDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISL 1868
M++ P+ Y + +GLC ++EA D L ++E P+ ++ +L + ++L
Sbjct: 636 MLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695
Query: 1869 GQLQDAEQLYDFAMQRGIRPSIKPVAEEPEYLLKEYVKSQEEMVAMSVI*FVL 2027
+ +L + MQ+ +EE ++K +K ++ A++ + VL
Sbjct: 696 SMEETLVKLVNMVMQKA------RFSEEEVSMVKGLLKIRKFQDALATLGGVL 742
Score = 113 bits (283), Expect = 3e-22
Identities = 92/388 (23%), Positives = 169/388 (43%), Gaps = 2/388 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T++++ L + A + EEM S KG E + +N+++ +G + AL M ++
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M+ G S+ +N ++ G +++ + + + +ME G+ N TY+ LI +C
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
MI G KPD + Y +++ C+ G+I KA +IV+ M +NGC P+ TY
Sbjct: 521 VEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+I GL R ++A + L+ ++ I Y+ +I GL
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGL-------------------- 620
Query: 1290 QLSSVTCNCMLRGYLREKNDYEAMKLYDKMREVG-CMPDGYTYRIII-GLHLRHNEVLEA 1463
R++ EA+ L+ +M E PD +YRI+ GL + EA
Sbjct: 621 --------------FRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREA 666
Query: 1464 LSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINA 1643
+ E+ + G + L +A+GL + E M+ +K + + + +
Sbjct: 667 VDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQK--ARFSEEEVSMVKG 724
Query: 1644 FATLGEMDDAIVFLNDMIDTTGRRPNVT 1727
+ + DA+ L ++D+ R+P T
Sbjct: 725 LLKIRKFQDALATLGGVLDS--RQPRRT 750
Score = 76.6 bits (187), Expect = 1e-10
Identities = 66/319 (20%), Positives = 132/319 (41%), Gaps = 2/319 (0%)
Frame = +3
Query: 981 PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEW 1160
P+ Y ++ L + G+ D +I+E M+N+GC + +I + D L
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGV 140
Query: 1161 LQKMEQD-NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYL 1334
+ M D + D+ Y+ +++ L + + + S G V T N +++
Sbjct: 141 VHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 1335 REKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTP 1514
R A+ + + M G +PD T+ I+ ++ ++ AL I +M + G
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 1515 LLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDM 1694
+ + G C+ GR ++DA+ F+ +M
Sbjct: 261 SVNVIVHGFCKEGR-----------------------------------VEDALNFIQEM 285
Query: 1695 IDTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQ 1874
+ G P+ ++ L+ GLCK +K A ++++ M++ +P TYN +I LG+
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 1875 LQDAEQLYDFAMQRGIRPS 1931
+++A + D + R P+
Sbjct: 346 VKEAVEFLDQMITRDCSPN 364
>XP_018841708.1 PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Juglans regia]
Length = 771
Score = 214 bits (546), Expect = 1e-55
Identities = 132/490 (26%), Positives = 233/490 (47%), Gaps = 2/490 (0%)
Frame = +3
Query: 465 PLVVSHVLRFQEDANIGLRFFKWAGSREGYAHNPETYSAIFTILVRAKMFDEARAMMEEM 644
P + LR Q D + L F+WA + + + Y I L +A+ F+ +++EEM
Sbjct: 69 PKQLLDTLRRQGDESSALSIFEWASKQPNFTPDSSVYEEILRKLGKARSFESMTSILEEM 128
Query: 645 ESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKN-LGHKPSLGAFNAVMKGLVQSD 821
+ + G EI F + ++ Y + L + + M++ G KP N V+ LV +
Sbjct: 129 K-LAGCEISAGTFLIFIESYAEFELYDQVLGVVEMMEDDFGLKPDTHFCNFVLNVLVDGN 187
Query: 822 DLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIKPDIYNYT 1001
L++++ +H M GI + +T++ LI+ +C +M ++G+ PD +T
Sbjct: 188 KLKLVENMHSSMVRRGIKPDVSTFNILIKGLCKAHQIRPAILMMEEMPSYGLSPDERTFT 247
Query: 1002 IVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEWLQKMEQD 1181
++ ++GN+ A E M + C G T N +I G E R AL ++Q+M
Sbjct: 248 TIMQGYIEEGNMSGALRFREQMVESRCPCTGVTVNVLINGFCKEGRIGEALSFIQEMSSQ 307
Query: 1182 NIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLREKNDYEA 1358
D FTY+ L++GLC++G A EV EG + T N ++ G + EA
Sbjct: 308 GFRPDQFTYNTLVNGLCRAGHAKHALEVMDVMLQEGFDPDIFTYNSLISGLCKLGEAEEA 367
Query: 1359 MKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPLLKKMAKG 1538
+++ ++M C P+ TY +I + N V EA + + G D + +G
Sbjct: 368 VEILNQMVSRDCSPNTVTYNTLISTLCKENRVKEATELARVLMSKGILPDVCTFNSLIQG 427
Query: 1539 LCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMIDTTGRRP 1718
LC H ++ ++ KG D Y + I+ +LG+++ A+ L +M +++G
Sbjct: 428 LCLTSNHRTAMEVFEEMKNKGCQPDEYTYNMLIDILCSLGKLEKALGLLKEM-ESSGCAR 486
Query: 1719 NVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQLQDAEQLY 1898
NV IY+ L+ G CK KR+++A +M + M + TYN LI ++++A QL
Sbjct: 487 NVVIYNTLINGFCKNKRVEDAEEMFDQMELLGVSRNSLTYNSLIDGLCKSRRVEEAAQLM 546
Query: 1899 DFAMQRGIRP 1928
D + G++P
Sbjct: 547 DQMIMEGLKP 556
Score = 182 bits (462), Expect = 2e-44
Identities = 117/447 (26%), Positives = 214/447 (47%), Gaps = 7/447 (1%)
Frame = +3
Query: 630 MMEEMESI---KGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAVM 800
++E M S +G + S FN+++KG I A+ M ++M + G P F +M
Sbjct: 191 LVENMHSSMVRRGIKPDVSTFNILIKGLCKAHQIRPAILMMEEMPSYGLSPDERTFTTIM 250
Query: 801 KGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGIK 980
+G ++ ++ +QM E T + LI C +M + G +
Sbjct: 251 QGYIEEGNMSGALRFREQMVESRCPCTGVTVNVLINGFCKEGRIGEALSFIQEMSSQGFR 310
Query: 981 PDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALEW 1160
PD + Y +++ LC+ G+ A E++++M G +P+ FTYN++I GL + A+E
Sbjct: 311 PDQFTYNTLVNGLCRAGHAKHALEVMDVMLQEGFDPDIFTYNSLISGLCKLGEAEEAVEI 370
Query: 1161 LQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEGQLSSV-TCNCMLRGYLR 1337
L +M + ++ TY+ LI LCK + +A E+ ++G L V T N +++G
Sbjct: 371 LNQMVSRDCSPNTVTYNTLISTLCKENRVKEATELARVLMSKGILPDVCTFNSLIQGLCL 430
Query: 1338 EKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTPL 1517
N AM+++++M+ GC PD YTY ++I + ++ +AL + EM +G + +
Sbjct: 431 TSNHRTAMEVFEEMKNKGCQPDEYTYNMLIDILCSLGKLEKALGLLKEMESSGCARNVVI 490
Query: 1518 LKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDMI 1697
+ G C+ R E+ + + GVS ++ Y I+ +++A ++ MI
Sbjct: 491 YNTLINGFCKNKRVEDAEEMFDQMELLGVSRNSLTYNSLIDGLCKSRRVEEAAQLMDQMI 550
Query: 1698 DTTGRRPNVTIYDALLKGLCKQKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLGQL 1877
G +P+ Y++LL C+ +K+A D++ SM EP TY LI G++
Sbjct: 551 -MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQSMTTSGCEPDIVTYGTLIGGLCRAGRI 609
Query: 1878 QDAEQLYDFAMQRGI---RPSIKPVAE 1949
+ A +L +G+ P+ PV +
Sbjct: 610 EVANRLLRTVQMKGMVLSPPAYNPVLQ 636
Score = 166 bits (419), Expect = 5e-39
Identities = 114/435 (26%), Positives = 200/435 (45%), Gaps = 2/435 (0%)
Frame = +3
Query: 618 EARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQKMKNLGHKPSLGAFNAV 797
EA + ++EM S +GF + +N +V G G ALE+ M G P + +N++
Sbjct: 296 EALSFIQEMSS-QGFRPDQFTYNTLVNGLCRAGHAKHALEVMDVMLQEGFDPDIFTYNSL 354
Query: 798 MKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXXXXXXXXXXYDMINWGI 977
+ GL + + E + QM N TY+ LI +C +++ GI
Sbjct: 355 ISGLCKLGEAEEAVEILNQMVSRDCSPNTVTYNTLISTLCKENRVKEATELARVLMSKGI 414
Query: 978 KPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNAIIRGLYNEKRPDLALE 1157
PD+ + +I LC N A E+ E M+N GC P+ +TYN +I L + + + AL
Sbjct: 415 LPDVCTFNSLIQGLCLTSNHRTAMEVFEEMKNKGCQPDEYTYNMLIDILCSLGKLEKALG 474
Query: 1158 WLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG-QLSSVTCNCMLRGYL 1334
L++ME ++ Y+ LI+G CK+ + A+E+F + G +S+T N ++ G
Sbjct: 475 LLKEMESSGCARNVVIYNTLINGFCKNKRVEDAEEMFDQMELLGVSRNSLTYNSLIDGLC 534
Query: 1335 REKNDYEAMKLYDKMREVGCMPDGYTYRIIIGLHLRHNEVLEALSIYHEMRKNGSDLDTP 1514
+ + EA +L D+M G PD +TY ++ R ++ +A I M +G + D
Sbjct: 535 KSRRVEEAAQLMDQMIMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQSMTTSGCEPDIV 594
Query: 1515 LLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINAFATLGEMDDAIVFLNDM 1694
+ GLCR GR E + ++ KG+ Y + A + ++ +M
Sbjct: 595 TYGTLIGGLCRAGRIEVANRLLRTVQMKGMVLSPPAYNPVLQALFKRKRTKEGMMLFREM 654
Query: 1695 IDTTGRRPNVTIYDALLKGLCK-QKRLKEAHDMLNSMIEHEIEPQPATYNILIKANISLG 1871
++ G P+ Y + +GLC + EA D + M+E P+ +++ L + +L
Sbjct: 655 VE-KGDPPDAITYKIVCRGLCNGGGPIGEAVDFMVEMMEKGFIPEFSSFMYLAEGLCALS 713
Query: 1872 QLQDAEQLYDFAMQR 1916
+L D M++
Sbjct: 714 MEDTLFKLVDMVMEK 728
Score = 117 bits (294), Expect = 1e-23
Identities = 92/380 (24%), Positives = 164/380 (43%), Gaps = 2/380 (0%)
Frame = +3
Query: 570 TYSAIFTILVRAKMFDEARAMMEEMESIKGFEIPKSVFNVMVKGYGYEGMISMALEMFQK 749
T++++ L A + EEM++ KG + + +N+++ G + AL + ++
Sbjct: 420 TFNSLIQGLCLTSNHRTAMEVFEEMKN-KGCQPDEYTYNMLIDILCSLGKLEKALGLLKE 478
Query: 750 MKNLGHKPSLGAFNAVMKGLVQSDDLEVMQILHQQMEEMGIHGNKTTYSHLIRCMCSXXX 929
M++ G ++ +N ++ G ++ +E + + QME +G+ N TY+ LI +C
Sbjct: 479 MESSGCARNVVIYNTLINGFCKNKRVEDAEEMFDQMELLGVSRNSLTYNSLIDGLCKSRR 538
Query: 930 XXXXXXXXYDMINWGIKPDIYNYTIVISALCKDGNIDKACEIVELMRNNGCNPNGFTYNA 1109
MI G+KPD + Y +++ C+ G+I KA +IV+ M +GC P+ TY
Sbjct: 539 VEEAAQLMDQMIMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQSMTTSGCEPDIVTYGT 598
Query: 1110 IIRGLYNEKRPDLALEWLQKMEQDNIPKDSFTYSILIDGLCKSGFMHKAKEVFLEASAEG 1289
+ I GLC++G + A + +G
Sbjct: 599 L-----------------------------------IGGLCRAGRIEVANRLLRTVQMKG 623
Query: 1290 Q-LSSVTCNCMLRGYLREKNDYEAMKLYDKMREVGCMPDGYTYRIII-GLHLRHNEVLEA 1463
LS N +L+ + K E M L+ +M E G PD TY+I+ GL + EA
Sbjct: 624 MVLSPPAYNPVLQALFKRKRTKEGMMLFREMVEKGDPPDAITYKIVCRGLCNGGGPIGEA 683
Query: 1464 LSIYHEMRKNGSDLDTPLLKKMAKGLCRVGRHEEGCGFYKMLREKGVSYDASDYYLAINA 1643
+ EM + G + +A+GLC + + M+ EK D I
Sbjct: 684 VDFMVEMMEKGFIPEFSSFMYLAEGLCALSMEDTLFKLVDMVMEKASFSDGE--VSMIRG 741
Query: 1644 FATLGEMDDAIVFLNDMIDT 1703
F + + DA+ L D++D+
Sbjct: 742 FLKIRKFQDALATLGDILDS 761