BLASTX nr result

ID: Ephedra29_contig00004413 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00004413
         (1781 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAT57662.1 hypothetical protein g.103543 [Anthurium amnicola]          61   2e-06
KNA20591.1 hypothetical protein SOVF_050980 [Spinacia oleracea]        60   4e-06
JAT51788.1 DNA replication and repair protein recF, partial [Ant...    55   6e-06

>JAT57662.1 hypothetical protein g.103543 [Anthurium amnicola]
          Length = 315

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 41/104 (39%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
 Frame = +2

Query: 377 MVGGGYNDGAVKRG----NIFAALDNXXXXXXXXXXXXXXXXXXXXXXXXXQQEFWAPTP 544
           MVGGG     V  G    N+FAALD+                         Q  FWAPTP
Sbjct: 1   MVGGGSRRDDVPLGVSSNNVFAALDSLRKKKKSDSSKSKASAKNQPKESEPQV-FWAPTP 59

Query: 545 IKEKSWAXXXXXXXXXYYATTAPPS-VWGPNSSSAAEPQAVVEE 673
           +  KSWA         YYATTAPP  VWG +     E  AVVEE
Sbjct: 60  LTAKSWADVDDDDDDDYYATTAPPQPVWGSSEQQTKEGSAVVEE 103


>KNA20591.1 hypothetical protein SOVF_050980 [Spinacia oleracea]
          Length = 320

 Score = 60.1 bits (144), Expect = 4e-06
 Identities = 41/110 (37%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
 Frame = +2

Query: 377 MVGGGY--NDGAV--KRGNIFAALDNXXXXXXXXXXXXXXXXXXXXXXXXXQQE---FWA 535
           MVGGG   N+G++     N+FAALD                          Q+E   FW 
Sbjct: 1   MVGGGSRKNEGSITINNTNVFAALDTLRKKKNKDKSKSSSSSKSSSKASKEQEEPQVFWQ 60

Query: 536 PTPIKEKSWAXXXXXXXXXYYATTAP-PSVWG-PNSSSAAEPQAVVEESD 679
           P P+  KSWA         YY TTAP PSVWG P S +  E  A+ EES+
Sbjct: 61  PAPLTTKSWADVEDEDDDDYYTTTAPLPSVWGAPASQTGNEANAIAEESE 110


>JAT51788.1 DNA replication and repair protein recF, partial [Anthurium
           amnicola]
          Length = 110

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 39/104 (37%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
 Frame = +2

Query: 377 MVGGGY--NDGA--VKRGNIFAALDNXXXXXXXXXXXXXXXXXXXXXXXXXQQEFWAPTP 544
           MVGGG   +DG+  +   N+FAALD+                         Q  FWAPTP
Sbjct: 1   MVGGGSRKDDGSQGISSNNVFAALDSLRKKKKSDASKGKASAKSQLKQAQPQV-FWAPTP 59

Query: 545 IKEKSWAXXXXXXXXXYYATTAP-PSVWGPNSSSAAEPQAVVEE 673
           +  KSWA         YYATTAP   VWG +     E  A VEE
Sbjct: 60  LTAKSWADVDDDDDDDYYATTAPLQPVWGSSEPQNKESSAPVEE 103


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