BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00004350
         (373 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAY87192.1 reverse transcriptase, partial [Cycas revoluta]            102   1e-25
XP_018498068.1 PREDICTED: uncharacterized protein LOC108865541 [...   107   2e-25
ABA99232.1 retrotransposon protein, putative, Ty1-copia subclass...   106   2e-25
AAY87195.1 reverse transcriptase, partial [Ginkgo biloba]             102   2e-25
KZV29500.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [D...   105   8e-25
YP_009241997.1 hypothetical protein (mitochondrion) [Oryza minut...   106   1e-24
YP_514636.1 hypothetical protein OrsaiPp07 (mitochondrion) [Oryz...   106   1e-24
XP_016675269.1 PREDICTED: uncharacterized protein LOC107894514 [...   106   2e-24
AAY87200.1 reverse transcriptase, partial [Sciadopitys verticill...   100   2e-24
XP_017187741.1 PREDICTED: uncharacterized mitochondrial protein ...   104   4e-24
JAU12536.1 Retrovirus-related Pol polyprotein from transposon TN...   104   7e-24
BAH94406.1 Os08g0544300 [Oryza sativa Japonica Group]                 105   8e-24
AAL66754.1 putative copia-like retrotransposon Hopscotch polypro...   105   8e-24
ABA97008.1 retrotransposon protein, putative, Ty1-copia subclass...   104   1e-23
ABF95616.1 retrotransposon protein, putative, Ty1-copia subclass...   104   1e-23
AAR88589.1 putative copia-like retrotransposon protein [Oryza sa...   104   1e-23
AAK55460.1 putative gag-pol polyprotein [Oryza sativa Japonica G...   104   1e-23
YP_002000554.1 orf490 (mitochondrion) [Oryza sativa Japonica Gro...   103   2e-23
KYP52900.1 Retrovirus-related Pol polyprotein from transposon TN...   103   3e-23
KYP46287.1 Retrovirus-related Pol polyprotein from transposon TN...   103   4e-23

>AAY87192.1 reverse transcriptase, partial [Cycas revoluta]
          Length = 148

 Score =  102 bits (255), Expect = 1e-25
 Identities = 56/120 (46%), Positives = 81/120 (67%), Gaps = 3/120 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGEL-EEVFMSQPPGYEKG--EQLVCK 203
           +P A + T+  ++ LA  KGW IY +DVKSAFL+G+L EEV+M QP GY K   E +VCK
Sbjct: 27  SPVAKLNTVKTVIALAAQKGWEIYQMDVKSAFLNGDLQEEVYMYQPEGYIKAGHENMVCK 86

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L K+LYGLKQ+PRA   KL  +L EN F   ++D +L ++K      +I++ + VDD+++
Sbjct: 87  LKKALYGLKQAPRAWYAKLDSYLTENGFHRCESDHSL-YVKGNSGSISIVVVY-VDDLVI 144


>XP_018498068.1 PREDICTED: uncharacterized protein LOC108865541 [Pyrus x
           bretschneideri]
          Length = 372

 Score =  107 bits (268), Expect = 2e-25
 Identities = 58/120 (48%), Positives = 87/120 (72%), Gaps = 3/120 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGEL-EEVFMSQPPGYEKGEQ--LVCK 203
           AP A M ++ +LL +A+NKGW++Y +DVK+AFLHG+L EEV+M  PPG+ + ++  LVCK
Sbjct: 67  APVAKMNSVRVLLSVAVNKGWSMYQMDVKNAFLHGDLEEEVYMRLPPGHPQSQEPDLVCK 126

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L+KS+YGLKQSPRA   KL+  L    F+ S AD++L F++     R +++  +VDD+I+
Sbjct: 127 LHKSIYGLKQSPRAWYAKLSSILHSVGFKRSNADSSL-FVRTGA-ARKLVVLIYVDDLII 184


>ABA99232.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 308

 Score =  106 bits (265), Expect = 2e-25
 Identities = 61/125 (48%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGELEE-VFMSQPPGYEKGEQL--VCK 203
           +P     TI ++L LA++ GW++  LDV++AFLHG LEE V+M QPPGYE   +L  VCK
Sbjct: 67  SPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCK 126

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L+K+LYGLKQ+PRA   +L+  L    F+ SKADA+L F   K+   +I +  +VDDII+
Sbjct: 127 LDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFY--KKGTISIFVLIYVDDIIV 184

Query: 22  IILCE 8
              CE
Sbjct: 185 ASSCE 189


>AAY87195.1 reverse transcriptase, partial [Ginkgo biloba]
          Length = 143

 Score =  102 bits (254), Expect = 2e-25
 Identities = 56/120 (46%), Positives = 86/120 (71%), Gaps = 3/120 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGEL-EEVFMSQPPGYE-KG-EQLVCK 203
           AP A M TI ++L LA    W ++ +DVKSAFL+G+L EEV+M QPPG++ KG E LVC+
Sbjct: 22  APVAKMITIRVVLALAAQFRWELHQMDVKSAFLNGDLTEEVYMEQPPGFQVKGKETLVCR 81

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L K+LYGLKQ+PRA  KK+  + ++N +  S +D+NL ++K +  + T ++  +VDD+++
Sbjct: 82  LKKALYGLKQAPRAWYKKIDDYFMKNGYNKSSSDSNL-YIKVRNGQIT-LVTLYVDDVVI 139


>KZV29500.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Dorcoceras
           hygrometricum]
          Length = 359

 Score =  105 bits (263), Expect = 8e-25
 Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 2/119 (1%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGELEE-VFMSQPPGYEKGE-QLVCKL 200
           AP A + TI +LL LA N  W ++ LD+K+AFLHG+LEE V+M QPPG+E  + QLVCKL
Sbjct: 76  APVAKLNTIRILLSLAANLDWPLHQLDIKNAFLHGDLEEVVYMRQPPGFESPDTQLVCKL 135

Query: 199 NKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           NKSLYGLKQSPRA   K +  +    +   +AD  L F+K+  +    I+  +VDDII+
Sbjct: 136 NKSLYGLKQSPRAWFDKFSKVVKMLGYRQGQADHTL-FVKHSNHGHITILIVYVDDIIV 193


>YP_009241997.1 hypothetical protein (mitochondrion) [Oryza minuta] AMA06715.1
           hypothetical protein (mitochondrion) [Oryza minuta]
          Length = 490

 Score =  106 bits (265), Expect = 1e-24
 Identities = 61/125 (48%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGELEE-VFMSQPPGYEKGEQL--VCK 203
           +P     TI ++L LA++ GW++  LDV++AFLHG LEE V+M QPPGYE   +L  VCK
Sbjct: 67  SPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCK 126

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L+K+LYGLKQ+PRA   +L+  L    F+ SKADA+L F   K+   +I +  +VDDII+
Sbjct: 127 LDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFY--KKGTISIFVLIYVDDIIV 184

Query: 22  IILCE 8
              CE
Sbjct: 185 ASSCE 189


>YP_514636.1 hypothetical protein OrsaiPp07 (mitochondrion) [Oryza sativa Indica
           Group] YP_003433855.1 hypothetical protein OrrupM_p18
           (mitochondrion) [Oryza rufipogon] AAZ99275.1
           hypothetical protein (mitochondrion) [Oryza sativa
           Indica Group] AAZ99329.1 hypothetical protein
           (mitochondrion) [Oryza sativa Japonica Group] AAZ99382.1
           hypothetical protein (mitochondrion) [Oryza sativa
           Japonica Group] BAI67959.1 hypothetical protein
           (mitochondrion) [Oryza rufipogon] BAI67987.1
           hypothetical protein (mitochondrion) [Oryza sativa
           Indica Group] AER12982.1 hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group] AER13050.1
           hypothetical protein (mitochondrion) [Oryza sativa
           Indica Group] AEZ03755.1 hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group] AEZ03764.1
           hypothetical protein (mitochondrion) [Oryza sativa
           Indica Group] BAN67511.1 hypothetical protein
           (mitochondrion) [Oryza rufipogon] BAN67513.1
           hypothetical protein (mitochondrion) [Oryza rufipogon]
           BAV53152.1 hypothetical protein (mitochondrion) [Oryza
           sativa Indica Group]
          Length = 490

 Score =  106 bits (265), Expect = 1e-24
 Identities = 61/125 (48%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGELEE-VFMSQPPGYEKGEQL--VCK 203
           +P     TI ++L LA++ GW++  LDV++AFLHG LEE V+M QPPGYE   +L  VCK
Sbjct: 67  SPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCK 126

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L+K+LYGLKQ+PRA   +L+  L    F+ SKADA+L F   K+   +I +  +VDDII+
Sbjct: 127 LDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFY--KKGTISIFVLIYVDDIIV 184

Query: 22  IILCE 8
              CE
Sbjct: 185 ASSCE 189


>XP_016675269.1 PREDICTED: uncharacterized protein LOC107894514 [Gossypium hirsutum]
          Length = 928

 Score =  106 bits (265), Expect = 2e-24
 Identities = 58/122 (47%), Positives = 87/122 (71%), Gaps = 5/122 (4%)
 Frame = -1

Query: 373  APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGEL-EEVFMSQPPGYEK----GEQLV 209
            +P     TI ++L +A++ GW++  +DV +AFL+G+L EE++M QPPG+E+    G+QLV
Sbjct: 792  SPVVKPTTIRVVLAIAVSLGWSLRQVDVNNAFLNGDLSEEIYMLQPPGFEQQGSNGQQLV 851

Query: 208  CKLNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDI 29
            C+L K+LYGLKQ+PRA   KL  FLL + FE SKAD +L F++  EN+   ++ + VDDI
Sbjct: 852  CRLRKALYGLKQAPRAWFHKLREFLLTSKFETSKADNSL-FIQRSENQLLYVLVY-VDDI 909

Query: 28   IL 23
            I+
Sbjct: 910  IV 911


>AAY87200.1 reverse transcriptase, partial [Sciadopitys verticillata]
          Length = 148

 Score = 99.8 bits (247), Expect = 2e-24
 Identities = 55/120 (45%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGEL-EEVFMSQPPGYEK--GEQLVCK 203
           AP A M T  +LL +A   GW ++ +DVKSAFL+G+L EEV+M+QP G+++   E LVC+
Sbjct: 27  APTAKMVTFRLLLSMAAQFGWKVFQMDVKSAFLNGDLDEEVYMTQPEGFQETGSEHLVCR 86

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L KSLYGLKQ+PRA   K+   L ++ F  S +D NL ++K+ E +  +I+  +VDD+++
Sbjct: 87  LVKSLYGLKQAPRAWYIKIDAHLKDSGFRRSMSDPNL-YVKSTE-DSIVILVVYVDDVVI 144


>XP_017187741.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Malus domestica]
          Length = 423

 Score =  104 bits (260), Expect = 4e-24
 Identities = 57/115 (49%), Positives = 83/115 (72%), Gaps = 3/115 (2%)
 Frame = -1

Query: 358 MKTIWMLLKLAINKGWNIYHLDVKSAFLHGELEE-VFMSQPPGYEKG--EQLVCKLNKSL 188
           M T+ +LL +A+NKGW +Y +DVK+AFLHGELEE V+M  PPG+ +   +  VCKL+KS+
Sbjct: 1   MNTVRVLLSVAVNKGWLMYQMDVKNAFLHGELEEDVYMRLPPGHSQSHKQDAVCKLHKSI 60

Query: 187 YGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           YGLKQSPRA   KL+  L+   FE S AD++L F+++     T+++  +VDD+I+
Sbjct: 61  YGLKQSPRAWYAKLSSVLISVGFERSNADSSL-FVRS-GTAGTLVVLVYVDDLII 113


>JAU12536.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Noccaea caerulescens]
          Length = 491

 Score =  104 bits (260), Expect = 7e-24
 Identities = 56/119 (47%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGEL-EEVFMSQPPGYEKG--EQLVCK 203
           AP A M T+ M++ +A  +GW IY LDVKSAFLHGEL E+VF+ QP GYE    E++V K
Sbjct: 64  APVARMDTVRMIIAVAAQRGWGIYQLDVKSAFLHGELKEDVFVEQPQGYEVAGKEEMVYK 123

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDII 26
           L+K+LYGLKQ+PRA   ++  + ++  FE S ++  L F+K K   + +I++ +VDD++
Sbjct: 124 LHKALYGLKQAPRAWFSRIEAYFIKEGFESSSSEQTL-FIKRK-GGKILIVSIYVDDLL 180


>BAH94406.1 Os08g0544300 [Oryza sativa Japonica Group]
          Length = 821

 Score =  105 bits (261), Expect = 8e-24
 Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 3/120 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGEL-EEVFMSQPPGYEKGE--QLVCK 203
           +P     TI ++L LA+++GW++  LDVK+AFLHG L EEV+M QPPGYEK      VCK
Sbjct: 389 SPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCK 448

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L+K+LYGLKQ+PRA   +L+  L E  F  SKAD +L F   K+ + +I +  +VDDII+
Sbjct: 449 LDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFY--KKGQVSIFLLIYVDDIIM 506


>AAL66754.1 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  105 bits (261), Expect = 8e-24
 Identities = 60/120 (50%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = -1

Query: 373  APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGELEE-VFMSQPPGYEKGEQL--VCK 203
            +P     TI ++L +A+++GW++  LDV++AFLHG LEE V+M QPPGYE   +L  VCK
Sbjct: 887  SPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCK 946

Query: 202  LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
            L+K+LYGLKQ+PRA   +L+  LL   F+ SKAD +L F  NK    TI +  +VDDII+
Sbjct: 947  LDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSL-FFYNK-GSVTIFVLVYVDDIIV 1004


>ABA97008.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1202

 Score =  104 bits (260), Expect = 1e-23
 Identities = 58/118 (49%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
 Frame = -1

Query: 373  APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGELEE-VFMSQPPGYEKGEQLVCKLN 197
            +P     TI  +L +AI++GW +  LDV++AFLHG LEE VFM QPPGYE+ +  VCKL+
Sbjct: 868  SPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDVFMRQPPGYEQKDGYVCKLD 927

Query: 196  KSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
            K+LYGLKQ+PRA   +L+  L E  F+ SK+D +L F    + + TI +  +VDDII+
Sbjct: 928  KALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFY--SKGDVTIFMLVYVDDIIV 983


>ABF95616.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1241

 Score =  104 bits (260), Expect = 1e-23
 Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 3/120 (2%)
 Frame = -1

Query: 373  APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGEL-EEVFMSQPPGYEKGE--QLVCK 203
            +P     TI ++L LA+++GW++  LDVK+AFLHG L EEV+M QPPGYEK      VCK
Sbjct: 913  SPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCK 972

Query: 202  LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
            L+K+LYGLKQ+PRA   +L+  L E  F  SKAD +L F   K+ + +I +  +VDDII+
Sbjct: 973  LDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFY--KKGQVSIFLLIYVDDIIV 1030


>AAR88589.1 putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  104 bits (260), Expect = 1e-23
 Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 3/120 (2%)
 Frame = -1

Query: 373  APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGEL-EEVFMSQPPGYEKGE--QLVCK 203
            +P     TI ++L LA+++GW++  LDVK+AFLHG L EEV+M QPPGYEK      VCK
Sbjct: 967  SPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCK 1026

Query: 202  LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
            L+K+LYGLKQ+PRA   +L+  L E  F  SKAD +L F   K+ + +I +  +VDDII+
Sbjct: 1027 LDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFY--KKGQVSIFLLIYVDDIIV 1084


>AAK55460.1 putative gag-pol polyprotein [Oryza sativa Japonica Group]
           AAP54977.1 retrotransposon protein, putative, Ty1-copia
           subclass [Oryza sativa Japonica Group]
          Length = 1031

 Score =  104 bits (259), Expect = 1e-23
 Identities = 58/117 (49%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
 Frame = -1

Query: 370 PKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGELEE-VFMSQPPGYEKGEQLVCKLNK 194
           P     TI  +L +AI++GW +  LDV++AFLHG LEE VFM QPPGYE+ +  VCKL+K
Sbjct: 607 PVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDVFMRQPPGYEQKDGYVCKLDK 666

Query: 193 SLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           +LYGLKQ+PRA   +L+  L E  F+ SK+D +L F    + + TI +  +VDDII+
Sbjct: 667 ALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFY--SKGDVTIFMLVYVDDIIV 721


>YP_002000554.1 orf490 (mitochondrion) [Oryza sativa Japonica Group] BAC19858.1
           orf490 (mitochondrion) [Oryza sativa Japonica Group]
          Length = 490

 Score =  103 bits (257), Expect = 2e-23
 Identities = 59/125 (47%), Positives = 83/125 (66%), Gaps = 3/125 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGELEE-VFMSQPPGYEKGEQL--VCK 203
           +P     TI ++L LA++ GW++  LDV++AFLHG LEE V+M QPPGYE   +L  VCK
Sbjct: 67  SPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCK 126

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L+K+LYGL+ +PRA   +L+  L    F+ SKADA+L F   K+   +I +  +VDDII+
Sbjct: 127 LDKALYGLRHAPRAWFSRLSMKLQNLGFQPSKADASLFFY--KKGTISIFVLIYVDDIIV 184

Query: 22  IILCE 8
              CE
Sbjct: 185 ASSCE 189


>KYP52900.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 737

 Score =  103 bits (257), Expect = 3e-23
 Identities = 55/120 (45%), Positives = 78/120 (65%), Gaps = 3/120 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGEL-EEVFMSQPPGY--EKGEQLVCK 203
           AP A M T+ ++L LA N GWN+   DVK+AFLHGE+ EE++M  PPGY  +     VCK
Sbjct: 308 APVAKMNTVRVILSLAANYGWNLQQFDVKNAFLHGEIEEEIYMELPPGYGEKTAANTVCK 367

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L K+LYGLKQSPRA   + T  ++   F+ S+ D  L F+K+ ++    ++  +VDDII+
Sbjct: 368 LKKALYGLKQSPRAWFGRFTKVMISLGFKQSQGDHTL-FIKHSKSRGVTVLLVYVDDIIV 426


>KYP46287.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 715

 Score =  103 bits (256), Expect = 4e-23
 Identities = 60/121 (49%), Positives = 85/121 (70%), Gaps = 3/121 (2%)
 Frame = -1

Query: 373 APKASMKTIWMLLKLAINKGWNIYHLDVKSAFLHGELEE-VFMSQPPGYE-KG-EQLVCK 203
           AP A   TI ML+ LA   GW IYH DVKSAFL+G LEE +++ QP G++ KG E  V K
Sbjct: 284 APVARHDTIRMLVALAAKFGWKIYHFDVKSAFLNGFLEEDIYVDQPEGFQVKGSENKVYK 343

Query: 202 LNKSLYGLKQSPRA*CKKLT*FLLENDFEVSKADANL*FLKNKENERTIIIAFHVDDIIL 23
           L+K+LYGLKQ+PRA   ++  +LL+  FE S+ +A L ++K  +NE  +II+ +VDD+++
Sbjct: 344 LHKALYGLKQAPRAWYTRIDNYLLQKGFERSENEATL-YVKRSQNEVKLIISLYVDDMLV 402

Query: 22  I 20
           I
Sbjct: 403 I 403