BLASTX nr result
ID: Ephedra29_contig00004194
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00004194 (2536 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AEX13478.1 hypothetical protein UMN_4616_01, partial [Pinus radi... 183 3e-50 AEX13477.1 hypothetical protein UMN_4616_01, partial [Pinus taeda] 179 7e-49 AEX13476.1 hypothetical protein UMN_4616_01, partial [Pinus taeda] 176 8e-48 OAE35386.1 hypothetical protein AXG93_2587s1010 [Marchantia poly... 145 3e-33 4HQD_A Chain A, Crystal Structure Of Engineered Protein. Northea... 108 1e-23 4GPM_A Chain A, Crystal Structure Of Engineered Protein. Northea... 103 7e-22 4HB5_A Chain A, Crystal Structure Of Engineered Protein. Northea... 103 9e-22 5EIL_A Chain A, Computational Design Of A High-affinity Metallop... 96 3e-19 4GMR_A Chain A, Crystal Structure Of Engineered Protein. Northea... 94 2e-18 4ATZ_D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repe... 93 2e-18 4HLL_A Chain A, Crystal Structure Of Artificial Ankyrin Repeat P... 94 2e-18 2V5Q_C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Doma... 93 3e-18 3NOC_D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders... 93 4e-18 AFI09265.1 LmrCD-specific DARPin, partial [synthetic construct] 92 1e-17 4K5A_B Chain B, Co-crystallization With Conformation-specific De... 91 1e-17 AAO25692.1 ankyrin repeat protein E4_8, partial [synthetic const... 92 2e-17 4F6R_D Chain D, Tubulin:stathmin-Like Domain Complex 4HNA_D Chai... 91 2e-17 1SVX_A Chain A, Crystal Structure Of A Designed Selected Ankyrin... 90 3e-17 CAQ52955.1 CD4-specific ankyrin repeat protein D27.2 [synthetic ... 90 3e-17 4DUI_A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In ... 90 5e-17 >AEX13478.1 hypothetical protein UMN_4616_01, partial [Pinus radiata] Length = 147 Score = 183 bits (464), Expect = 3e-50 Identities = 85/137 (62%), Positives = 110/137 (80%) Frame = +3 Query: 1113 AVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDK 1292 AVR N+ ++KL+ GG IQS D++GRT LHWATVLGHE+ALK LLLNT+R++ID KDK Sbjct: 10 AVRSNDAGMIKKLLEGGNPIQSSDSIGRTPLHWATVLGHEKALKALLLNTSRQIIDTKDK 69 Query: 1293 HGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGAD 1472 GRT LHY C+ G QFAS++IKRGAS S D +GRTPLHYA Q++ ++V+LL+ NGA+ Sbjct: 70 LGRTPLHYGCAGGRTQFASILIKRGASVNSKDSKGRTPLHYAAQNVKVDMVELLLNNGAN 129 Query: 1473 KNVGDCDGVASWDMALQ 1523 K+VGDC+GV WD+AL+ Sbjct: 130 KDVGDCNGVRPWDLALK 146 >AEX13477.1 hypothetical protein UMN_4616_01, partial [Pinus taeda] Length = 147 Score = 179 bits (454), Expect = 7e-49 Identities = 83/137 (60%), Positives = 111/137 (81%) Frame = +3 Query: 1113 AVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDK 1292 AVR N++ ++KLIAGG IQS D++G+T LHWATVLGH+EALK LLLNT++++ID KDK Sbjct: 10 AVRSNDVGVIKKLIAGGNLIQSSDSIGQTPLHWATVLGHDEALKALLLNTSKQLIDVKDK 69 Query: 1293 HGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGAD 1472 GRT LHYAC+ G Q AS +IKRGA S+D +GRTPLHYA Q++ ++V+LL++NGA+ Sbjct: 70 LGRTSLHYACAEGRTQLASNLIKRGAPVNSMDSKGRTPLHYATQNVKVDMVELLLKNGAE 129 Query: 1473 KNVGDCDGVASWDMALQ 1523 K+V DC+GV WD+AL+ Sbjct: 130 KDVRDCNGVGPWDLALK 146 >AEX13476.1 hypothetical protein UMN_4616_01, partial [Pinus taeda] Length = 147 Score = 176 bits (446), Expect = 8e-48 Identities = 81/137 (59%), Positives = 110/137 (80%) Frame = +3 Query: 1113 AVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDK 1292 AV+ N++ ++ LIAGG IQS D++G+T LHWATVLGH+EALK LLLNT++++ID KDK Sbjct: 10 AVKSNDVGVIKNLIAGGNLIQSSDSIGQTPLHWATVLGHDEALKALLLNTSKQLIDVKDK 69 Query: 1293 HGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGAD 1472 GRT LHYAC+ G Q AS +IKRGA S+D +GRTPLHYA Q++ ++V+LL++NGA+ Sbjct: 70 LGRTSLHYACAEGRTQLASNLIKRGAPVNSMDSKGRTPLHYATQNVKVDMVELLLKNGAE 129 Query: 1473 KNVGDCDGVASWDMALQ 1523 K+V DC+GV WD+AL+ Sbjct: 130 KDVKDCNGVGPWDLALK 146 >OAE35386.1 hypothetical protein AXG93_2587s1010 [Marchantia polymorpha subsp. polymorpha] Length = 499 Score = 145 bits (366), Expect = 3e-33 Identities = 97/279 (34%), Positives = 134/279 (48%), Gaps = 19/279 (6%) Frame = +3 Query: 1113 AVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDK 1292 AV+ N++ +RKLI G + S D GR+ LHWA V GH+EA K L+LNT++R +D+ D Sbjct: 39 AVKENDVTTIRKLIERGAKVNSPDRFGRSPLHWAIVYGHQEATKALILNTSKRALDSTDS 98 Query: 1293 HGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGAD 1472 G T LHYA G + ++I RGA D R RTPLH+A Q P +V++LI GAD Sbjct: 99 CGCTALHYAALGGRTEIGRILIDRGAQVNCADSRQRTPLHFAAQHPQPTMVEMLISRGAD 158 Query: 1473 KNVGD------CDGVASWDMALQLGCSHLFGALKSHHAVRVENNEETEQSQAKKHHIKNA 1634 K D CD W L C + + + + K H ++ Sbjct: 159 KRCRDFREYLPCDVALEWASFSSLAC--------------LRPDAPKKDPKLKVHPVEIV 204 Query: 1635 ENDYLQAKKHHPIKNEGLQGKQYGSLDALLADWKRA--EAKKKEEPHDPV--------KD 1784 + +A ++ +G SLD LL WK A EA++K+E V + Sbjct: 205 DCPDARAAAVDVVQRKG------PSLDKLLESWKSAETEARRKKEAESQVAARSFADLQQ 258 Query: 1785 ALNVWREAEAVARQERKMHS--PNSCED-GNDTFCQSSS 1892 L WR AE ARQ + S P+ +D GND F S S Sbjct: 259 RLQEWRAAELDARQAHRADSSRPSFVDDWGNDAFSSSPS 297 >4HQD_A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. 4HQD_B Chain B, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169 Score = 108 bits (270), Expect = 1e-23 Identities = 62/168 (36%), Positives = 87/168 (51%), Gaps = 7/168 (4%) Frame = +3 Query: 1083 MDNCAPGLLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNT 1262 M L+ A D+++ LI G + + D+ GRT LH+A GH+E +K+L+ Sbjct: 1 MSELGKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60 Query: 1263 TRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEV 1442 ++AKD GRT LHYA G+ + L+I +GA + D GRTPLHYA + E+ Sbjct: 61 AD--VNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEI 118 Query: 1443 VDLLIENGADKNVGDCDGVASWDMALQLGCSHLF-------GALKSHH 1565 V LLI GAD N D DG D+A + G + G L+ HH Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLEHHH 166 >4GPM_A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. 4GPM_B Chain B, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169 Score = 103 bits (257), Expect = 7e-22 Identities = 61/168 (36%), Positives = 87/168 (51%), Gaps = 7/168 (4%) Frame = +3 Query: 1083 MDNCAPGLLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNT 1262 M L+ A D+++ LI G + + D+ GRT LH A GH+E +K+L+ Sbjct: 1 MSELGKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKG 60 Query: 1263 TRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEV 1442 ++AKD GRT LH+A G+ + L+I +GA + D GRTPLH+A ++ EV Sbjct: 61 AD--VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 118 Query: 1443 VDLLIENGADKNVGDCDGVASWDMALQLGCSHLF-------GALKSHH 1565 V LLI GAD N D DG D+A + G + G L+ HH Sbjct: 119 VKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEHHH 166 >4HB5_A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. 4HB5_B Chain B, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169 Score = 103 bits (256), Expect = 9e-22 Identities = 60/168 (35%), Positives = 86/168 (51%), Gaps = 7/168 (4%) Frame = +3 Query: 1083 MDNCAPGLLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNT 1262 M L+ A D+++ L+ G + D+ GRT LH+A GH+E +K+LL Sbjct: 1 MSELGKRLIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60 Query: 1263 TRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEV 1442 +AKD GRT LHYA G+ + L++ +GA + D GRTPLHYA ++ E+ Sbjct: 61 ADP--NAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEI 118 Query: 1443 VDLLIENGADKNVGDCDGVASWDMALQLGCSHLF-------GALKSHH 1565 V LL+ GAD N D DG D+A + G + G L+ HH Sbjct: 119 VKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWLEHHH 166 Score = 73.6 bits (179), Expect = 2e-11 Identities = 43/115 (37%), Positives = 60/115 (52%) Frame = +3 Query: 1224 GHEEALKVLLLNTTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRT 1403 G+++ +K LL N +A D GRT LHYA G+ + L++ +GA + D GRT Sbjct: 15 GNKDRVKDLLENGADP--NASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRT 72 Query: 1404 PLHYAVQSMSPEVVDLLIENGADKNVGDCDGVASWDMALQLGCSHLFGALKSHHA 1568 PLHYA ++ E+V LL+ GAD N D DG A + G + L S A Sbjct: 73 PLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGA 127 >5EIL_A Chain A, Computational Design Of A High-affinity Metalloprotein Homotrimer Containing A Metal Chelating Non-canonical Amino Acid 5EIL_B Chain B, Computational Design Of A High-affinity Metalloprotein Homotrimer Containing A Metal Chelating Non-canonical Amino Acid 5EIL_C Chain C, Computational Design Of A High-affinity Metalloprotein Homotrimer Containing A Metal Chelating Non-canonical Amino Acid Length = 159 Score = 95.5 bits (236), Expect = 3e-19 Identities = 54/142 (38%), Positives = 78/142 (54%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 L+ AV + + ++ L+ G + D G T LH A + GH+E +K+LL +A Sbjct: 8 LIXAVLIGSKEAVKVLLDLGADPNASDEDGLTPLHAAAMAGHKEIVKLLLSKGADP--NA 65 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 KD GRT LHYA G+ + L++ +GA + D GRTPLHYA ++ E+V LL+ Sbjct: 66 KDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSK 125 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 GAD N D DG D+A + G Sbjct: 126 GADPNTSDSDGRTPLDLAREHG 147 Score = 74.3 bits (181), Expect = 8e-12 Identities = 45/119 (37%), Positives = 63/119 (52%) Frame = +3 Query: 1212 ATVLGHEEALKVLLLNTTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDC 1391 A ++G +EA+KVLL +A D+ G T LH A AG+ + L++ +GA + D Sbjct: 11 AVLIGSKEAVKVLL--DLGADPNASDEDGLTPLHAAAMAGHKEIVKLLLSKGADPNAKDS 68 Query: 1392 RGRTPLHYAVQSMSPEVVDLLIENGADKNVGDCDGVASWDMALQLGCSHLFGALKSHHA 1568 GRTPLHYA ++ E+V LL+ GAD N D DG A + G + L S A Sbjct: 69 DGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGA 127 Score = 71.6 bits (174), Expect = 7e-11 Identities = 46/129 (35%), Positives = 68/129 (52%) Frame = +3 Query: 1080 DMDNCAPGLLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLN 1259 D D P L A + ++ L++ G + D+ GRT LH+A GH+E +K+LL Sbjct: 34 DEDGLTP-LHAAAMAGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSK 92 Query: 1260 TTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPE 1439 +AKD GRT LHYA G+ + L++ +GA + D GRTPL A + + E Sbjct: 93 GADP--NAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEE 150 Query: 1440 VVDLLIENG 1466 +V LL + G Sbjct: 151 IVKLLEKQG 159 >4GMR_A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. 4GMR_B Chain B, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169 Score = 94.0 bits (232), Expect = 2e-18 Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 7/168 (4%) Frame = +3 Query: 1083 MDNCAPGLLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNT 1262 M L+ A D+++ L+ G + + D+ G+T LH A GH+E +K+LL Sbjct: 1 MSELGKRLIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60 Query: 1263 TRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEV 1442 +AKD G+T LH A G+ + L++ +GA + D G+TPLH A ++ EV Sbjct: 61 ADP--NAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEV 118 Query: 1443 VDLLIENGADKNVGDCDGVASWDMALQLGCSHLF-------GALKSHH 1565 V LL+ GAD N D DG D+A + G + G L+ HH Sbjct: 119 VKLLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEHHH 166 Score = 68.2 bits (165), Expect = 1e-09 Identities = 40/115 (34%), Positives = 60/115 (52%) Frame = +3 Query: 1224 GHEEALKVLLLNTTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRT 1403 G+++ +K LL N ++A D G+T LH A G+ + L++ +GA + D G+T Sbjct: 15 GNKDRVKDLLENGAD--VNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKT 72 Query: 1404 PLHYAVQSMSPEVVDLLIENGADKNVGDCDGVASWDMALQLGCSHLFGALKSHHA 1568 PLH A ++ EVV LL+ GAD N D DG +A + G + L S A Sbjct: 73 PLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGA 127 >4ATZ_D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein 4ATZ_E Chain E, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein 4ATZ_F Chain F, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154 Score = 93.2 bits (230), Expect = 2e-18 Identities = 52/142 (36%), Positives = 83/142 (58%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A R + D++R L+A G + D GRT LH A +GH E ++VLL N ++A Sbjct: 6 LLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGAD--VNA 63 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 D +G T LH A S G+++ +++K GA + D G TPL+ A E+V++L+++ Sbjct: 64 VDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKH 123 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 GAD N D G ++D+++ +G Sbjct: 124 GADVNAQDKFGKTAFDISIDIG 145 Score = 69.7 bits (169), Expect = 3e-10 Identities = 40/127 (31%), Positives = 66/127 (51%) Frame = +3 Query: 1188 LGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRG 1367 LG+ L A G ++ +++L+ N +A D +GRT LH A + G+++ ++++ G Sbjct: 2 LGKKLLEAARA-GQDDEVRILMANGADA--NAYDHYGRTPLHMAAAVGHLEIVEVLLRNG 58 Query: 1368 ASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGADKNVGDCDGVASWDMALQLGCSHLFG 1547 A +VD G TPLH A E+V++L++ GAD N D G+ +A G + Sbjct: 59 ADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVE 118 Query: 1548 ALKSHHA 1568 L H A Sbjct: 119 VLLKHGA 125 >4HLL_A Chain A, Crystal Structure Of Artificial Ankyrin Repeat Protein_ank(gag)1d4 Length = 173 Score = 93.6 bits (231), Expect = 2e-18 Identities = 53/152 (34%), Positives = 86/152 (56%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A R + D++R L+ G + + D++G T LH A GH E +++LL + ++A Sbjct: 21 LLEAARAGQDDEVRLLLEHGADVNARDSIGSTPLHLAAYYGHLEIVRLLLEHGAD--VNA 78 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 +D G T LHYA G+++ L+++ GA + D G TPLH A + E+V LL+++ Sbjct: 79 RDSTGTTPLHYAARLGHLEIVRLLLEHGADVNARDAMGWTPLHLAAKKGHLEIVRLLLKH 138 Query: 1464 GADKNVGDCDGVASWDMALQLGCSHLFGALKS 1559 GAD N D G ++D+++ G L L+S Sbjct: 139 GADVNANDHFGKTAFDISIDNGNEDLAEILQS 170 Score = 65.5 bits (158), Expect = 1e-08 Identities = 42/127 (33%), Positives = 66/127 (51%) Frame = +3 Query: 1188 LGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRG 1367 LG+ L A G ++ +++LL + ++A+D G T LH A G+++ L+++ G Sbjct: 17 LGKKLLEAARA-GQDDEVRLLLEHGAD--VNARDSIGSTPLHLAAYYGHLEIVRLLLEHG 73 Query: 1368 ASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGADKNVGDCDGVASWDMALQLGCSHLFG 1547 A + D G TPLHYA + E+V LL+E+GAD N D G +A + G + Sbjct: 74 ADVNARDSTGTTPLHYAARLGHLEIVRLLLEHGADVNARDAMGWTPLHLAAKKGHLEIVR 133 Query: 1548 ALKSHHA 1568 L H A Sbjct: 134 LLLKHGA 140 >2V5Q_C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin 2V5Q_D Chain D, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167 Score = 93.2 bits (230), Expect = 3e-18 Identities = 53/142 (37%), Positives = 80/142 (56%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A R + D++R LIA G + + D G T LH A V GH E ++VLL + +DA Sbjct: 18 LLEAARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGAD--VDA 75 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 D +G T LH A G+++ +++K GA + D G TPLH A E+V++L++ Sbjct: 76 ADVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKY 135 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 GAD N D G ++D+++ G Sbjct: 136 GADVNAQDKFGKTAFDISIDNG 157 >3NOC_D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface 3NOC_E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169 Score = 92.8 bits (229), Expect = 4e-18 Identities = 53/142 (37%), Positives = 81/142 (57%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A R + D++R L+A G + + D G T LH A GH E ++VLL N ++A Sbjct: 18 LLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGAD--VNA 75 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 KD G T LH A G+++ +++K GA + D G TPLH A + E+V++L++N Sbjct: 76 KDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKN 135 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 GAD N D G ++D+++ G Sbjct: 136 GADVNAQDKFGKTAFDISIDNG 157 Score = 62.4 bits (150), Expect = 1e-07 Identities = 34/114 (29%), Positives = 60/114 (52%) Frame = +3 Query: 1113 AVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDK 1292 A L+ + L+ G + + D+LG T LH A GH E ++VLL N ++A D Sbjct: 54 AAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHLAARRGHLEIVEVLLKNGAD--VNASDS 111 Query: 1293 HGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLL 1454 HG T LH A G+++ +++K GA + D G+T ++ + + ++ ++L Sbjct: 112 HGFTPLHLAAKRGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165 >AFI09265.1 LmrCD-specific DARPin, partial [synthetic construct] Length = 169 Score = 91.7 bits (226), Expect = 1e-17 Identities = 51/142 (35%), Positives = 80/142 (56%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A R+ D++R L+A G + + D G T LH A +GH E ++VLL N ++A Sbjct: 18 LLEAARVGRDDEVRILMANGADVNAKDIFGDTPLHLAAWIGHLEIVEVLLKNGAD--VNA 75 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 D G T LH A AG+++ +++K GA ++D G TPLH E+V++L++N Sbjct: 76 ADIWGNTPLHLAADAGHLEIVEVLLKHGADVNAIDWMGDTPLHLTALWGHLEIVEVLLKN 135 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 G D N D G ++D+++ G Sbjct: 136 GVDVNAQDKFGKTAFDISIDNG 157 >4K5A_B Chain B, Co-crystallization With Conformation-specific Designed Ankyrin Repeat Proteins Explains The Conformational Flexibility Of Bcl-w Length = 169 Score = 91.3 bits (225), Expect = 1e-17 Identities = 52/142 (36%), Positives = 81/142 (57%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A + + D++R L+A G + + D G T LH A + GH E ++VLL T ++A Sbjct: 18 LLEAANVGQHDEVRILMANGADVNAADKYGDTPLHLAAMNGHLEIVEVLL--KTGADVNA 75 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 D GRT LH A G+++ +++K GA + G+TPLH A Q E+V++L+++ Sbjct: 76 VDFMGRTPLHLAADNGHLEIVEVLLKHGADVNAQAFWGKTPLHLAAQQGHLEIVEVLLKH 135 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 GAD N D G +D+A+ G Sbjct: 136 GADVNAQDKFGKTPFDLAIDNG 157 Score = 72.4 bits (176), Expect = 5e-11 Identities = 44/127 (34%), Positives = 69/127 (54%) Frame = +3 Query: 1188 LGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRG 1367 LG+ L A V H+E +++L+ N ++A DK+G T LH A G+++ +++K G Sbjct: 14 LGKKLLEAANVGQHDE-VRILMANGAD--VNAADKYGDTPLHLAAMNGHLEIVEVLLKTG 70 Query: 1368 ASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGADKNVGDCDGVASWDMALQLGCSHLFG 1547 A +VD GRTPLH A + E+V++L+++GAD N G +A Q G + Sbjct: 71 ADVNAVDFMGRTPLHLAADNGHLEIVEVLLKHGADVNAQAFWGKTPLHLAAQQGHLEIVE 130 Query: 1548 ALKSHHA 1568 L H A Sbjct: 131 VLLKHGA 137 Score = 58.5 bits (140), Expect = 3e-06 Identities = 32/108 (29%), Positives = 60/108 (55%) Frame = +3 Query: 1131 LDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDKHGRTCL 1310 L+ + L+ G + + D +GRT LH A GH E ++VLL + ++A+ G+T L Sbjct: 60 LEIVEVLLKTGADVNAVDFMGRTPLHLAADNGHLEIVEVLLKHGAD--VNAQAFWGKTPL 117 Query: 1311 HYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLL 1454 H A G+++ +++K GA + D G+TP A+ + + ++ ++L Sbjct: 118 HLAAQQGHLEIVEVLLKHGADVNAQDKFGKTPFDLAIDNGNEDIAEVL 165 >AAO25692.1 ankyrin repeat protein E4_8, partial [synthetic construct] Length = 199 Score = 92.0 bits (227), Expect = 2e-17 Identities = 53/142 (37%), Positives = 80/142 (56%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A R + D++R L+A G + + D G T LH A +GH E ++VLL N ++A Sbjct: 18 LLEAARAGQDDEVRILMANGADVNARDRDGNTPLHLAADMGHLEIVEVLLKNGAD--VNA 75 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 D G T LH A G+++ +++K GA ++D G TPLH A + E+V++L++N Sbjct: 76 DDVTGFTPLHLAAVWGHLEIVEVLLKNGADVNAIDTIGYTPLHLAANNGHLEIVEVLLKN 135 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 GAD N D +GV +A G Sbjct: 136 GADVNAHDTNGVTPLHLAAHEG 157 Score = 81.6 bits (200), Expect = 6e-14 Identities = 51/150 (34%), Positives = 79/150 (52%) Frame = +3 Query: 1080 DMDNCAPGLLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLN 1259 D D P L A + L+ + L+ G + + D G T LH A V GH E ++VLL N Sbjct: 44 DRDGNTP-LHLAADMGHLEIVEVLLKNGADVNADDVTGFTPLHLAAVWGHLEIVEVLLKN 102 Query: 1260 TTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPE 1439 ++A D G T LH A + G+++ +++K GA + D G TPLH A E Sbjct: 103 GAD--VNAIDTIGYTPLHLAANNGHLEIVEVLLKNGADVNAHDTNGVTPLHLAAHEGHLE 160 Query: 1440 VVDLLIENGADKNVGDCDGVASWDMALQLG 1529 +V++L++ GAD N D G ++D+++ G Sbjct: 161 IVEVLLKYGADVNAQDKFGKTAFDISIDNG 190 >4F6R_D Chain D, Tubulin:stathmin-Like Domain Complex 4HNA_D Chain D, Kinesin Motor Domain In The Adp-mg-alfx State In Complex With Tubulin And A Darpin Length = 169 Score = 90.5 bits (223), Expect = 2e-17 Identities = 51/142 (35%), Positives = 82/142 (57%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A R + D++R L+A G + + D G+T LH A + GH E ++VLL + ++A Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGAD--VNA 75 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 DK G T LH A G+++ +++K GA + D G TPLH A + E+V++L++ Sbjct: 76 ADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKY 135 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 GAD N D G ++D+++ G Sbjct: 136 GADVNAQDKFGKTAFDISIDNG 157 Score = 65.5 bits (158), Expect = 1e-08 Identities = 37/114 (32%), Positives = 61/114 (53%) Frame = +3 Query: 1188 LGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRG 1367 LG+ L A G ++ +++L+ N ++A+D G+T LH A G+++ +++K G Sbjct: 14 LGKKLLEAARA-GQDDEVRILMANGAD--VNAEDDSGKTPLHLAAIKGHLEIVEVLLKHG 70 Query: 1368 ASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGADKNVGDCDGVASWDMALQLG 1529 A + D G TPLH A E+V++L++NGAD N D G +A G Sbjct: 71 ADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAG 124 >1SVX_A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein AAQ93810.1 ankyrin repeat protein off7 [synthetic construct] Length = 169 Score = 90.1 bits (222), Expect = 3e-17 Identities = 51/142 (35%), Positives = 81/142 (57%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A R + D++R L+A G + + D G T LH A GH E ++VLL + +DA Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGAD--VDA 75 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 D G T LH A G+++ +++K GA ++D G TPLH A + E+V++L+++ Sbjct: 76 SDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKH 135 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 GAD N D G ++D+++ G Sbjct: 136 GADVNAQDKFGKTAFDISIDNG 157 Score = 70.9 bits (172), Expect = 2e-10 Identities = 42/127 (33%), Positives = 67/127 (52%) Frame = +3 Query: 1188 LGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRG 1367 LGR L A G ++ +++L+ N ++A D G T LH A +G+++ +++K G Sbjct: 14 LGRKLLEAARA-GQDDEVRILMANGAD--VNAADNTGTTPLHLAAYSGHLEIVEVLLKHG 70 Query: 1368 ASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGADKNVGDCDGVASWDMALQLGCSHLFG 1547 A + D G TPLH A E+V++L++NGAD N D DG+ +A + G + Sbjct: 71 ADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVE 130 Query: 1548 ALKSHHA 1568 L H A Sbjct: 131 VLLKHGA 137 >CAQ52955.1 CD4-specific ankyrin repeat protein D27.2 [synthetic construct] Length = 169 Score = 90.1 bits (222), Expect = 3e-17 Identities = 52/142 (36%), Positives = 84/142 (59%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A R + D++R L+A G + + D GRT+LH A GH E ++VLL + ++A Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAKDDEGRTSLHLAAREGHLEIVEVLLKHGAD--VNA 75 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 +D +G T LH A + G+++ +++K A ++D G TPLH A EVV++L++N Sbjct: 76 QDWYGSTPLHLAAAWGHLEIVEVLLKNVADVNAMDGDGSTPLHLAAHYAHLEVVEVLLKN 135 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 GAD N D G ++D+++ G Sbjct: 136 GADVNAQDKFGKTAFDISIDNG 157 Score = 66.2 bits (160), Expect = 7e-09 Identities = 37/103 (35%), Positives = 58/103 (56%) Frame = +3 Query: 1188 LGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRG 1367 LG+ L A G ++ +++L+ N ++AKD GRT LH A G+++ +++K G Sbjct: 14 LGKRLLEAARA-GQDDEVRILMANGAD--VNAKDDEGRTSLHLAAREGHLEIVEVLLKHG 70 Query: 1368 ASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGADKNVGDCDG 1496 A + D G TPLH A E+V++L++N AD N D DG Sbjct: 71 ADVNAQDWYGSTPLHLAAAWGHLEIVEVLLKNVADVNAMDGDG 113 >4DUI_A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169 Score = 89.7 bits (221), Expect = 5e-17 Identities = 52/142 (36%), Positives = 81/142 (57%) Frame = +3 Query: 1104 LLRAVRLNELDKMRKLIAGGYAIQSCDALGRTALHWATVLGHEEALKVLLLNTTRRMIDA 1283 LL A R + D++R L+A G + + DA G T LH A GH E ++VLL + ++A Sbjct: 18 LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGAD--VNA 75 Query: 1284 KDKHGRTCLHYACSAGNVQFASLMIKRGASAKSVDCRGRTPLHYAVQSMSPEVVDLLIEN 1463 D G T LH A G+++ +++K GA +VD G TPLH A E+V++L+++ Sbjct: 76 IDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKH 135 Query: 1464 GADKNVGDCDGVASWDMALQLG 1529 GAD N D G ++D+++ G Sbjct: 136 GADVNAQDKFGKTAFDISIDNG 157 Score = 65.1 bits (157), Expect = 2e-08 Identities = 39/127 (30%), Positives = 66/127 (51%) Frame = +3 Query: 1188 LGRTALHWATVLGHEEALKVLLLNTTRRMIDAKDKHGRTCLHYACSAGNVQFASLMIKRG 1367 LG+ L A G ++ +++L+ N ++A D G T LH A + G+++ +++K G Sbjct: 14 LGKKLLEAARA-GQDDEVRILMANGAD--VNATDASGLTPLHLAATYGHLEIVEVLLKHG 70 Query: 1368 ASAKSVDCRGRTPLHYAVQSMSPEVVDLLIENGADKNVGDCDGVASWDMALQLGCSHLFG 1547 A ++D G TPLH A E+V++L+++GAD N D G +A +G + Sbjct: 71 ADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVE 130 Query: 1548 ALKSHHA 1568 L H A Sbjct: 131 VLLKHGA 137