BLASTX nr result

ID: Ephedra29_contig00004085 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00004085
         (674 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EOY28176.1 Uncharacterized protein TCM_029816 [Theobroma cacao]        57   1e-07
KMT04609.1 hypothetical protein BVRB_8g182630 [Beta vulgaris sub...    54   8e-07
ABR16782.1 unknown [Picea sitchensis]                                  53   3e-06
OAY26229.1 hypothetical protein MANES_16G031000 [Manihot esculenta]    52   4e-06

>EOY28176.1 Uncharacterized protein TCM_029816 [Theobroma cacao]
          Length = 44

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = -3

Query: 501 MLELFVLSCTGVVVLLHGAHIFFQWMFKHAAVQALSFLMHVG 376
           M+ELFVL CTGVVV LHGA+ FF  + +H AV++LSFL  VG
Sbjct: 2   MVELFVLGCTGVVVFLHGANFFFHILSQHLAVRSLSFLGFVG 43


>KMT04609.1 hypothetical protein BVRB_8g182630 [Beta vulgaris subsp. vulgaris]
          Length = 44

 Score = 54.3 bits (129), Expect = 8e-07
 Identities = 23/42 (54%), Positives = 32/42 (76%)
 Frame = -3

Query: 501 MLELFVLSCTGVVVLLHGAHIFFQWMFKHAAVQALSFLMHVG 376
           ++ELFVL CTG+V+  HGAH+ F  +F H A+++LSFL  VG
Sbjct: 2   VVELFVLGCTGMVMFYHGAHVLFHALFSHVALRSLSFLGFVG 43


>ABR16782.1 unknown [Picea sitchensis]
          Length = 41

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = -3

Query: 501 MLELFVLSCTGVVVLLHGAHIFFQWMFKHAAVQALSFLMHV 379
           ML+L +L CTGV+V +HGA+ FF ++ KH AV+AL+FL HV
Sbjct: 1   MLDL-LLGCTGVIVFIHGANFFFNYICKHVAVRALTFLSHV 40


>OAY26229.1 hypothetical protein MANES_16G031000 [Manihot esculenta]
          Length = 44

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 23/42 (54%), Positives = 33/42 (78%)
 Frame = -3

Query: 501 MLELFVLSCTGVVVLLHGAHIFFQWMFKHAAVQALSFLMHVG 376
           ++ELF+L CTGVV+ LHGA+ FF  + +H A+++LSFL  VG
Sbjct: 2   VVELFLLGCTGVVMFLHGANFFFHILTQHLAIRSLSFLGFVG 43


Top