BLASTX nr result

ID: Ephedra29_contig00004044 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00004044
         (684 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CEM29614.1 unnamed protein product [Vitrella brassicaformis CCMP...    62   1e-07
XP_016514066.1 PREDICTED: E3 ubiquitin-protein ligase UHRF1-like...    58   1e-06
XP_016514064.1 PREDICTED: E3 ubiquitin-protein ligase UHRF1-like...    58   1e-06
XP_009628539.1 PREDICTED: putative E3 ubiquitin-protein ligase R...    58   2e-06
XP_009628532.1 PREDICTED: putative E3 ubiquitin-protein ligase R...    58   2e-06
XP_015457059.1 PREDICTED: E3 ubiquitin-protein ligase TRIM39-lik...    58   2e-06
XP_002605529.1 hypothetical protein BRAFLDRAFT_245374 [Branchios...    53   3e-06
XP_017836525.1 PREDICTED: E3 ubiquitin-protein ligase RNF125-lik...    54   3e-06
XP_015209342.1 PREDICTED: tripartite motif-containing protein 47...    55   4e-06
XP_004175905.2 PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like ...    57   5e-06
XP_014108515.1 PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like ...    57   6e-06
XP_014746675.1 PREDICTED: tripartite motif-containing protein 29...    57   6e-06
XP_015497444.1 PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like ...    57   7e-06
XP_017583719.1 PREDICTED: probable E3 ubiquitin-protein ligase M...    57   8e-06
XP_010397927.1 PREDICTED: probable E3 ubiquitin-protein ligase M...    57   8e-06
XP_002600398.1 hypothetical protein BRAFLDRAFT_237354 [Branchios...    52   8e-06
CDQ92427.1 unnamed protein product [Oncorhynchus mykiss]               56   8e-06
XP_010184418.1 PREDICTED: probable E3 ubiquitin-protein ligase T...    56   8e-06

>CEM29614.1 unnamed protein product [Vitrella brassicaformis CCMP3155]
          Length = 365

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = -3

Query: 409 VEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLWSPTRCPTCRRTFN 257
           V + L C +CFG+ Y+P AL C H FC  CL +S+  W  ++CP C+R+F+
Sbjct: 12  VPDCLECSICFGLLYKPTALDCGHVFCFWCLFRSMAQWHASKCPLCKRSFS 62


>XP_016514066.1 PREDICTED: E3 ubiquitin-protein ligase UHRF1-like isoform X2
           [Nicotiana tabacum]
          Length = 274

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/65 (38%), Positives = 37/65 (56%)
 Frame = -3

Query: 409 VEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLWSPTRCPTCRRTFNDDDLALRVH 230
           + E L C +C  + YEP   SC H+FC  CLR +  +   TRCP CR+  ++ + +  V+
Sbjct: 196 LREELSCAICLEICYEPSTTSCGHSFCEKCLRSAADICG-TRCPKCRQLISNGN-SCTVN 253

Query: 229 APLWN 215
             LWN
Sbjct: 254 TGLWN 258


>XP_016514064.1 PREDICTED: E3 ubiquitin-protein ligase UHRF1-like isoform X1
           [Nicotiana tabacum]
          Length = 275

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/65 (38%), Positives = 37/65 (56%)
 Frame = -3

Query: 409 VEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLWSPTRCPTCRRTFNDDDLALRVH 230
           + E L C +C  + YEP   SC H+FC  CLR +  +   TRCP CR+  ++ + +  V+
Sbjct: 197 LREELSCAICLEICYEPSTTSCGHSFCEKCLRSAADICG-TRCPKCRQLISNGN-SCTVN 254

Query: 229 APLWN 215
             LWN
Sbjct: 255 TGLWN 259


>XP_009628539.1 PREDICTED: putative E3 ubiquitin-protein ligase RING1a isoform X2
           [Nicotiana tomentosiformis]
          Length = 351

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 25/65 (38%), Positives = 37/65 (56%)
 Frame = -3

Query: 409 VEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLWSPTRCPTCRRTFNDDDLALRVH 230
           + E L C +C  + YEP   SC H+FC  CLR +  +   TRCP CR+  ++ + +  V+
Sbjct: 196 LREELSCAICLEICYEPSTTSCGHSFCEKCLRSAADICG-TRCPKCRQLISNGN-SCTVN 253

Query: 229 APLWN 215
             LWN
Sbjct: 254 TGLWN 258


>XP_009628532.1 PREDICTED: putative E3 ubiquitin-protein ligase RING1a isoform X1
           [Nicotiana tomentosiformis]
          Length = 352

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 25/65 (38%), Positives = 37/65 (56%)
 Frame = -3

Query: 409 VEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLWSPTRCPTCRRTFNDDDLALRVH 230
           + E L C +C  + YEP   SC H+FC  CLR +  +   TRCP CR+  ++ + +  V+
Sbjct: 197 LREELSCAICLEICYEPSTTSCGHSFCEKCLRSAADICG-TRCPKCRQLISNGN-SCTVN 254

Query: 229 APLWN 215
             LWN
Sbjct: 255 TGLWN 259


>XP_015457059.1 PREDICTED: E3 ubiquitin-protein ligase TRIM39-like [Astyanax
           mexicanus]
          Length = 470

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
 Frame = -3

Query: 418 LAGVEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLWSPTRCPTCRRTFNDD---- 251
           L+ +++HLLC +C  +  +P  LSC H+FC +CL+QS        CP CRR  + +    
Sbjct: 5   LSTLQQHLLCPICLEIFTDPVLLSCGHSFCRTCLQQSWTQSPGRECPVCRRRSSKELPAP 64

Query: 250 DLALR 236
           DLALR
Sbjct: 65  DLALR 69


>XP_002605529.1 hypothetical protein BRAFLDRAFT_245374 [Branchiostoma floridae]
           EEN61539.1 hypothetical protein BRAFLDRAFT_245374,
           partial [Branchiostoma floridae]
          Length = 62

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 24/47 (51%), Positives = 25/47 (53%)
 Frame = -3

Query: 403 EHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLWSPTRCPTCRRT 263
           E L CG+C      P ALSC HTFC  CL Q     S   CP CRRT
Sbjct: 12  EFLRCGICLDAFTNPKALSCLHTFCRDCLAQYAARRSSFPCPNCRRT 58


>XP_017836525.1 PREDICTED: E3 ubiquitin-protein ligase RNF125-like [Drosophila
           busckii] ALC41127.1 CG17048 [Drosophila busckii]
          Length = 106

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -3

Query: 394 LCGLCFGVSYEPPALSCSHTFCTSCLR--QSLQLWSPTRCPTCRRTFNDDDLALRVHAPL 221
           LC  C    + P  L C H+FC SCL+     + WS  RCP CRR    D+L  R  A  
Sbjct: 21  LCAFCLDRLHNPVQLRCKHSFCRSCLQLYSEARDWSAKRCPLCRRCLTLDELRCRRVASA 80

Query: 220 WNI 212
           W +
Sbjct: 81  WRL 83


>XP_015209342.1 PREDICTED: tripartite motif-containing protein 47-like, partial
           [Lepisosteus oculatus]
          Length = 131

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 24/60 (40%), Positives = 35/60 (58%)
 Frame = -3

Query: 415 AGVEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLWSPTRCPTCRRTFNDDDLALR 236
           + +E+ L+C +C  +  EP +L C H+FC +C+R+        RCP CRR    D LALR
Sbjct: 3   SALEDALVCAVCLDLFQEPVSLPCGHSFCQACIRRHWNSSGDCRCPQCRRAI-PDPLALR 61


>XP_004175905.2 PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Taeniopygia
           guttata]
          Length = 397

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = -3

Query: 418 LAGVEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQL-WSPTRCPTC 272
           +AG++E L C +C  +  EP A+ CSH+FC  C++Q+L+   SP RCP C
Sbjct: 7   MAGLKEELTCPICLEIYKEPVAVGCSHSFCRDCVKQALRAQQSPARCPLC 56


>XP_014108515.1 PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Pseudopodoces
           humilis]
          Length = 420

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
 Frame = -3

Query: 418 LAGVEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLW-SPTRCPTCRRTFND 254
           ++G++E L C +C  +  +P +LSCSH+FC  C++Q+++   SP RCP C  T  +
Sbjct: 7   VSGLKEELTCPICLDIYRDPTSLSCSHSFCRDCIKQAIRSQPSPVRCPLCLSTVGE 62


>XP_014746675.1 PREDICTED: tripartite motif-containing protein 29-like [Sturnus
           vulgaris]
          Length = 451

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = -3

Query: 418 LAGVEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLW-SPTRCPTCR 269
           +AG+ E L C +C  +  +P +LSC H+FC  C+RQ+L+   SP RCP C+
Sbjct: 64  MAGLREELSCPVCLDIYRDPTSLSCGHSFCRDCIRQALRSQSSPARCPLCQ 114


>XP_015497444.1 PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Parus major]
          Length = 419

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -3

Query: 415 AGVEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLW-SPTRCPTCRRTFND 254
           +G++E L C +C  +  +P +LSCSH+FC  C++Q+++   SP RCP C  T  +
Sbjct: 8   SGLKEELTCPICLDIYRDPTSLSCSHSFCRDCIKQAIRSQPSPVRCPLCLSTVGE 62


>XP_017583719.1 PREDICTED: probable E3 ubiquitin-protein ligase MID2 [Corvus
           brachyrhynchos]
          Length = 432

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
 Frame = -3

Query: 418 LAGVEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQL-WSPTRCPTC 272
           +AG+ E L C +C  +  +P +L CSH+FCT C+RQ+L+   S  RCP C
Sbjct: 11  VAGLREELTCPICLDIYRDPASLGCSHSFCTECIRQALRCQQSAARCPLC 60


>XP_010397927.1 PREDICTED: probable E3 ubiquitin-protein ligase MID2 [Corvus cornix
           cornix]
          Length = 436

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
 Frame = -3

Query: 418 LAGVEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQL-WSPTRCPTC 272
           +AG+ E L C +C  +  +P +L CSH+FCT C+RQ+L+   S  RCP C
Sbjct: 15  VAGLREELTCPICLDIYRDPASLGCSHSFCTECIRQALRCQQSAARCPLC 64


>XP_002600398.1 hypothetical protein BRAFLDRAFT_237354 [Branchiostoma floridae]
           EEN56410.1 hypothetical protein BRAFLDRAFT_237354,
           partial [Branchiostoma floridae]
          Length = 61

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 23/53 (43%), Positives = 28/53 (52%)
 Frame = -3

Query: 406 EEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLWSPTRCPTCRRTFNDDD 248
           EE L C +C     +P  L C HTFCT CL++      P  CPTCR  F+  D
Sbjct: 7   EEFLTCPVCMLHFRDPKILPCLHTFCTECLKEWATKQQPLECPTCRAQFSLPD 59


>CDQ92427.1 unnamed protein product [Oncorhynchus mykiss]
          Length = 322

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 22/49 (44%), Positives = 30/49 (61%)
 Frame = -3

Query: 415 AGVEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLWSPTRCPTCR 269
           + + +HL C +C  +  EP +LSC HTFC  CL +SL+     RCP CR
Sbjct: 6   SALSDHLCCAICTEIFNEPVSLSCQHTFCKRCLEKSLEAGLRPRCPECR 54


>XP_010184418.1 PREDICTED: probable E3 ubiquitin-protein ligase TRIM8 [Mesitornis
           unicolor]
          Length = 323

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
 Frame = -3

Query: 418 LAGVEEHLLCGLCFGVSYEPPALSCSHTFCTSCLRQSLQLW----SPTRCPTC 272
           +A +EE L C +C G+  +P +LSCSH+FC  C+++ L+ W     P  CP C
Sbjct: 7   VASLEEELTCPICLGIYRDPVSLSCSHSFCKECIQEVLRHWHSPEGPASCPLC 59


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