BLASTX nr result

ID: Ephedra29_contig00004031 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00004031
         (717 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015169701.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   6e-06

>XP_015169701.1 PREDICTED: pentatricopeptide repeat-containing protein At4g17616
           [Solanum tuberosum] XP_015169702.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g17616
           [Solanum tuberosum] XP_015169703.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g17616
           [Solanum tuberosum] XP_015169704.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g17616
           [Solanum tuberosum] XP_015169705.1 PREDICTED:
           pentatricopeptide repeat-containing protein At4g17616
           [Solanum tuberosum]
          Length = 715

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 31/100 (31%), Positives = 51/100 (51%)
 Frame = -2

Query: 314 IIAHELEDSIRRNKLEDALDAYQRYINEVGIPDKYLMTKYLNFLSQLNELEKASQVVDYV 135
           ++  +LE ++R + LE+A + Y+ +    G PD +L+ K L  LS  ++     +  + V
Sbjct: 83  VLLGKLESALRNHNLEEAWETYKDFKRLYGFPDPFLVDKLLTKLSYSSDSRWLKKACNMV 142

Query: 134 AHVASNPMAHLERETSESLCLKFAIADMPVPASALLRTMV 15
             +       L  E    LCL  A A MPV AS++LR M+
Sbjct: 143 GSILKEKREMLRTELMTKLCLSLARAQMPVQASSILRLML 182


Top